首页 > 最新文献

Archives of pathology & laboratory medicine最新文献

英文 中文
Is Social Media Here to Stay?: Survey Results Indicate Increasing Pathologist Interest and Engagement Over Time. 社交媒体会继续存在吗?调查结果显示病理学家对社交媒体的兴趣和参与度与日俱增。
Pub Date : 2024-02-14 DOI: 10.5858/arpa.2023-0387-OA
Raul S Gonzalez, Elizabeth L McKinnon, Maren Y Fuller, Jerad M Gardner, Wei Chen, Xiaoyin Sara Jiang

Context.—: Social media has become widely adopted by pathologists and other physicians for professional purposes. While engagement has likely increased over time, there remain few concrete data regarding attitudes toward its use.

Objective.—: To assess pathologists' use of and attitudes toward social media over time.

Design.—: We created a survey regarding personal and professional use of social media and circulated it via multiple channels in December 2017 and again in February 2022. Results of the 2 surveys were compared for statistically significant differences.

Results.—: The 2017 survey was completed by 97 participants, and the 2022 survey by 305 participants. Respondents were predominantly female and academics, included pathologists in all age categories and all time-in-practice length. In both surveys, Twitter (now X) was the most popular platform for professional use and Facebook was the most popular for personal use. Professional barriers to social media use remained consistent between the 2 surveys, including the amount of time required. Education was seen as the main benefit of social media use in both surveys, while other benefits such as networking and increasing professional visibility were endorsed significantly less often in the second survey. While the second survey received more than 3 times as many responses as the first, several aspects of social media use (mainly demographics) remained similar during the timeframe, while other aspects (such as usage and perceived values) decreased.

Conclusions.—: Pathologists continue to find social media valuable. Barriers remain, though overall pathologists of all ages and practice settings appear receptive to using social media to further educational and other opportunities.

背景病理学家和其他医生出于专业目的广泛使用社交媒体。虽然随着时间的推移,参与度可能会有所提高,但有关其使用态度的具体数据仍然很少:评估病理学家随着时间推移对社交媒体的使用情况和态度:我们制作了一份关于社交媒体的个人和专业使用情况的调查表,并于 2017 年 12 月和 2022 年 2 月通过多种渠道分发。我们对两次调查的结果进行了比较,以发现统计学上的显著差异:有 97 人完成了 2017 年的调查,305 人完成了 2022 年的调查。受访者以女性和学者为主,包括所有年龄段和执业时间长短的病理学家。在两次调查中,Twitter(现为 X)是最受欢迎的专业使用平台,而 Facebook 则是最受欢迎的个人使用平台。在两次调查中,使用社交媒体的专业障碍保持一致,包括所需的时间。在两次调查中,教育都被视为使用社交媒体的主要益处,而在第二次调查中,网络和提高专业知名度等其他益处被认可的次数明显较少。虽然第二次调查收到的回复是第一次调查的三倍多,但在这段时间内,社交媒体使用的几个方面(主要是人口统计学)保持相似,而其他方面(如使用率和认知价值)则有所下降:病理学家仍然认为社交媒体很有价值。病理学家仍然认为社交媒体很有价值,但障碍依然存在,不过总体而言,所有年龄段和执业环境的病理学家似乎都乐于使用社交媒体来促进教育和其他机会。
{"title":"Is Social Media Here to Stay?: Survey Results Indicate Increasing Pathologist Interest and Engagement Over Time.","authors":"Raul S Gonzalez, Elizabeth L McKinnon, Maren Y Fuller, Jerad M Gardner, Wei Chen, Xiaoyin Sara Jiang","doi":"10.5858/arpa.2023-0387-OA","DOIUrl":"https://doi.org/10.5858/arpa.2023-0387-OA","url":null,"abstract":"<p><strong>Context.—: </strong>Social media has become widely adopted by pathologists and other physicians for professional purposes. While engagement has likely increased over time, there remain few concrete data regarding attitudes toward its use.</p><p><strong>Objective.—: </strong>To assess pathologists' use of and attitudes toward social media over time.</p><p><strong>Design.—: </strong>We created a survey regarding personal and professional use of social media and circulated it via multiple channels in December 2017 and again in February 2022. Results of the 2 surveys were compared for statistically significant differences.</p><p><strong>Results.—: </strong>The 2017 survey was completed by 97 participants, and the 2022 survey by 305 participants. Respondents were predominantly female and academics, included pathologists in all age categories and all time-in-practice length. In both surveys, Twitter (now X) was the most popular platform for professional use and Facebook was the most popular for personal use. Professional barriers to social media use remained consistent between the 2 surveys, including the amount of time required. Education was seen as the main benefit of social media use in both surveys, while other benefits such as networking and increasing professional visibility were endorsed significantly less often in the second survey. While the second survey received more than 3 times as many responses as the first, several aspects of social media use (mainly demographics) remained similar during the timeframe, while other aspects (such as usage and perceived values) decreased.</p><p><strong>Conclusions.—: </strong>Pathologists continue to find social media valuable. Barriers remain, though overall pathologists of all ages and practice settings appear receptive to using social media to further educational and other opportunities.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-02-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139731150","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Clinicopathologic and Molecular Characteristics of Resected Thoracic Mass Lesions in the Pediatric Population: A 25-Year Institutional Experience From a Tertiary Care Center. 儿童胸腔肿块切除术的临床病理和分子特征:一家三级医疗中心25年的机构经验。
Pub Date : 2024-02-13 DOI: 10.5858/arpa.2023-0251-OA
Julian A Villalba, Simone Bsp Terra, Beth Pitel, Shannon M Knight, Benjamin R Kipp, Jennifer M Boland

Context.—: Primary thoracic neoplasms are rare in children, whereas nonneoplastic mass lesions or cysts and metastases are more common, and there is a relative paucity of comprehensive histopathologic and molecular data.

Objective.—: To define the clinicopathologic spectrum of neoplastic and nonneoplastic diseases observed in resected mass lesions in the chest of pediatric patients, and to identify somatic alterations observed in primary neoplasms.

Design.—: Clinicopathologic features of thoracic mass lesions (n = 385) resected from 373 patients aged ≤21 years in a 25-year period (1993-2018) were included. Primary neoplasms having sufficient material were tested by a laboratory-developed comprehensive genomic profiling assay that assesses tumor mutational burden, microsatellite instability, somatic sequence variants, gene amplifications, fusions, and specific transcript variants.

Results.—: The most commonly resected space-occupying lesions were nonneoplastic mass lesions and cysts or malformations, resected in 117 (31.4%) and 58 of 373 patients (15.5%) respectively. Metastatic neoplasms were observed in 169 of 373 patients (45.3%; mean age 14.4 years, range 1-21 years); the most common was osteosarcoma (68 of 169; 40.2% of metastases). Primary lung neoplasms occurred in 24 of 373 patients (6.4%; mean age 14.5 years, range 6 months-21 years), and 16 patients had primary extrapulmonary thoracic tumors. Carcinoid tumor was the most common primary lung neoplasm (7 typical, 3 atypical). Molecular testing showed a prevalence of somatic pathogenic or likely pathogenic mutations and copy-number alterations. No fusions or splice variants were identified. Tumors were microsatellite-stable with low tumor mutational burden.

Conclusions.—: Resected pediatric thoracic mass lesions are more likely to be metastatic lesions, congenital cysts or malformations, or nonneoplastic lesions compared to primary thoracic neoplasms, which are encountered at a low frequency and tend to have relatively simple genetic profiles.

背景原发性胸部肿瘤在儿童中非常罕见,而非肿瘤性肿块病变或囊肿和转移瘤则更为常见,全面的组织病理学和分子数据相对匮乏:确定在儿童患者胸部切除肿块病变中观察到的肿瘤性和非肿瘤性疾病的临床病理范围,并确定在原发性肿瘤中观察到的体细胞改变:纳入25年间(1993-2018年)从373名年龄≤21岁的患者身上切除的胸部肿块病变(n = 385)的临床病理特征。具有足够材料的原发性肿瘤通过实验室开发的综合基因组图谱检测法进行检测,该检测法可评估肿瘤突变负荷、微卫星不稳定性、体细胞序列变异、基因扩增、融合和特定转录本变异:最常切除的占位性病变是非肿瘤性肿块和囊肿或畸形,在373例患者中,分别有117例(31.4%)和58例(15.5%)被切除。373 例患者中有 169 例(45.3%;平均年龄 14.4 岁,1-21 岁不等)观察到转移性肿瘤;最常见的是骨肉瘤(169 例中有 68 例;占转移病例的 40.2%)。373 例患者中有 24 例(6.4%;平均年龄为 14.5 岁,年龄范围为 6 个月至 21 岁)患有原发性肺肿瘤,16 例患者患有原发性肺外胸部肿瘤。类癌是最常见的原发性肺肿瘤(7 例典型,3 例不典型)。分子检测显示,体细胞致病突变或可能致病突变以及拷贝数改变十分普遍。未发现融合或剪接变异。肿瘤微卫星稳定,肿瘤突变负荷低:与原发性胸部肿瘤相比,切除的小儿胸部肿块病变更有可能是转移性病变、先天性囊肿或畸形或非肿瘤性病变,而原发性胸部肿瘤的发生率较低,且往往具有相对简单的遗传特征。
{"title":"Clinicopathologic and Molecular Characteristics of Resected Thoracic Mass Lesions in the Pediatric Population: A 25-Year Institutional Experience From a Tertiary Care Center.","authors":"Julian A Villalba, Simone Bsp Terra, Beth Pitel, Shannon M Knight, Benjamin R Kipp, Jennifer M Boland","doi":"10.5858/arpa.2023-0251-OA","DOIUrl":"https://doi.org/10.5858/arpa.2023-0251-OA","url":null,"abstract":"<p><strong>Context.—: </strong>Primary thoracic neoplasms are rare in children, whereas nonneoplastic mass lesions or cysts and metastases are more common, and there is a relative paucity of comprehensive histopathologic and molecular data.</p><p><strong>Objective.—: </strong>To define the clinicopathologic spectrum of neoplastic and nonneoplastic diseases observed in resected mass lesions in the chest of pediatric patients, and to identify somatic alterations observed in primary neoplasms.</p><p><strong>Design.—: </strong>Clinicopathologic features of thoracic mass lesions (n = 385) resected from 373 patients aged ≤21 years in a 25-year period (1993-2018) were included. Primary neoplasms having sufficient material were tested by a laboratory-developed comprehensive genomic profiling assay that assesses tumor mutational burden, microsatellite instability, somatic sequence variants, gene amplifications, fusions, and specific transcript variants.</p><p><strong>Results.—: </strong>The most commonly resected space-occupying lesions were nonneoplastic mass lesions and cysts or malformations, resected in 117 (31.4%) and 58 of 373 patients (15.5%) respectively. Metastatic neoplasms were observed in 169 of 373 patients (45.3%; mean age 14.4 years, range 1-21 years); the most common was osteosarcoma (68 of 169; 40.2% of metastases). Primary lung neoplasms occurred in 24 of 373 patients (6.4%; mean age 14.5 years, range 6 months-21 years), and 16 patients had primary extrapulmonary thoracic tumors. Carcinoid tumor was the most common primary lung neoplasm (7 typical, 3 atypical). Molecular testing showed a prevalence of somatic pathogenic or likely pathogenic mutations and copy-number alterations. No fusions or splice variants were identified. Tumors were microsatellite-stable with low tumor mutational burden.</p><p><strong>Conclusions.—: </strong>Resected pediatric thoracic mass lesions are more likely to be metastatic lesions, congenital cysts or malformations, or nonneoplastic lesions compared to primary thoracic neoplasms, which are encountered at a low frequency and tend to have relatively simple genetic profiles.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139725316","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Laboratorian Interpretation of Drug Testing Results in Pain Management: Lessons From College of American Pathologists Proficiency Testing. 实验室人员对疼痛治疗药物检测结果的解释:美国病理学家学会能力测试的启示。
Pub Date : 2024-02-08 DOI: 10.5858/arpa.2023-0310-CP
Christine L H Snozek, Loralie J Langman, Annabel Dizon, Matthew D Krasowski

Context.—: Accurate interpretation of drug test results is key to appropriate patient care in numerous settings including pain management. Despite recommendations that providers should consult laboratory professionals for guidance when necessary, literature demonstrating laboratorian expertise in drug test interpretation is lacking.

Objective.—: To evaluate participating laboratories' performance on the case-based, interpretive ("dry") challenge included with each Drug Monitoring for Pain Management proficiency testing program from 2012-2023.

Design.—: All challenges (n = 23) required participants to identify if drug test results were consistent or inconsistent with prescribed medications in the case history. Relevant medications, presumptive and confirmatory drug test results, and participant responses were extracted from program summary reports and examined for performance and common themes.

Results.—: Overall, 91.8% (6821 of 7431) of participant responses correctly identified whether drug testing was consistent with medications. There were 8 challenges with participant scores below 91.8% (range, 59.8% [49 of 82 responses] to 88.9% [193 of 217 responses]). Common knowledge gaps identified in these challenges included false-positive presumptive (screening) results, minor metabolism of opiates, and recognizing that presence of a nonprescribed drug is inconsistent with prescribed medications. Although some participants repeatedly responded incorrectly, there were no associations between laboratory type, personnel responding, or analytical performance with incorrect responses to interpretative challenges.

Conclusions.—: Program participants performed well overall, but several concerning educational gaps were identified. Laboratorians have a role in providing interpretative guidance for drug testing and should emphasize ongoing education to ensure competence in the setting of constantly changing prescribed and nonprescribed drug use.

背景在包括疼痛治疗在内的许多情况下,准确解读药物检测结果是为患者提供适当护理的关键。尽管有人建议医疗服务提供者在必要时应向实验室专业人员寻求指导,但目前尚缺乏证明实验室在药物检测解读方面具有专业知识的文献:评估参与实验室在 2012 年至 2023 年期间每次疼痛管理药物监测能力验证计划中基于案例的解释性("干")挑战中的表现:所有挑战(n = 23)都要求参与者确定药物检测结果是否与病例中的处方药一致或不一致。从项目总结报告中提取了相关药物、推定和确证药物测试结果以及参与者的回答,并对其表现和共同主题进行了研究:总体而言,91.8%(7431 人中的 6821 人)的参与者回答正确识别了药物测试是否与药物一致。有 8 项挑战的参与者得分低于 91.8%(范围从 59.8%[82 个回答中的 49 个]到 88.9%[217 个回答中的 193 个])。在这些挑战中发现的常见知识差距包括假阳性推定(筛查)结果、鸦片制剂的微量代谢以及认识到非处方药物的存在与处方药物不一致。虽然一些参与者多次回答错误,但实验室类型、回答人员或分析性能与解释性挑战的错误回答之间没有关联:该计划的参与者总体表现良好,但也发现了一些令人担忧的教育差距。实验室人员在为药物检测提供解释性指导方面扮演着重要角色,他们应重视持续教育,以确保在处方药和非处方药使用不断变化的情况下能够胜任工作。
{"title":"Laboratorian Interpretation of Drug Testing Results in Pain Management: Lessons From College of American Pathologists Proficiency Testing.","authors":"Christine L H Snozek, Loralie J Langman, Annabel Dizon, Matthew D Krasowski","doi":"10.5858/arpa.2023-0310-CP","DOIUrl":"https://doi.org/10.5858/arpa.2023-0310-CP","url":null,"abstract":"<p><strong>Context.—: </strong>Accurate interpretation of drug test results is key to appropriate patient care in numerous settings including pain management. Despite recommendations that providers should consult laboratory professionals for guidance when necessary, literature demonstrating laboratorian expertise in drug test interpretation is lacking.</p><p><strong>Objective.—: </strong>To evaluate participating laboratories' performance on the case-based, interpretive (\"dry\") challenge included with each Drug Monitoring for Pain Management proficiency testing program from 2012-2023.</p><p><strong>Design.—: </strong>All challenges (n = 23) required participants to identify if drug test results were consistent or inconsistent with prescribed medications in the case history. Relevant medications, presumptive and confirmatory drug test results, and participant responses were extracted from program summary reports and examined for performance and common themes.</p><p><strong>Results.—: </strong>Overall, 91.8% (6821 of 7431) of participant responses correctly identified whether drug testing was consistent with medications. There were 8 challenges with participant scores below 91.8% (range, 59.8% [49 of 82 responses] to 88.9% [193 of 217 responses]). Common knowledge gaps identified in these challenges included false-positive presumptive (screening) results, minor metabolism of opiates, and recognizing that presence of a nonprescribed drug is inconsistent with prescribed medications. Although some participants repeatedly responded incorrectly, there were no associations between laboratory type, personnel responding, or analytical performance with incorrect responses to interpretative challenges.</p><p><strong>Conclusions.—: </strong>Program participants performed well overall, but several concerning educational gaps were identified. Laboratorians have a role in providing interpretative guidance for drug testing and should emphasize ongoing education to ensure competence in the setting of constantly changing prescribed and nonprescribed drug use.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-02-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139704239","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
SPOT/Dx Pilot Reanalysis and College of American Pathologists Proficiency Testing for KRAS and NRAS Demonstrate Excellent Laboratory Performance. SPOT/Dx Pilot再分析和美国病理学家学院KRAS和NRAS的能力测试证明了卓越的实验室性能。
Pub Date : 2024-02-01 DOI: 10.5858/arpa.2023-0322-CP
Ahmet Zehir, Valentina Nardi, Eric Q Konnick, Christina M Lockwood, Thomas A Long, Nikoletta Sidiropoulos, Rhona J Souers, Patricia Vasalos, Neal I Lindeman, Joel T Moncur

Context.—: The Sustainable Predictive Oncology Therapeutics and Diagnostics quality assurance pilot study (SPOT/Dx pilot) on molecular oncology next-generation sequencing (NGS) reportedly demonstrated performance limitations of NGS laboratory-developed tests, including discrepancies with a US Food and Drug Administration-approved companion diagnostic. The SPOT/Dx pilot methods differ from those used in proficiency testing (PT) programs.

Objective.—: To reanalyze SPOT/Dx pilot data using PT program methods and compare to PT program data.Also see p. 136.

Design.—: The College of American Pathologists (CAP) Molecular Oncology Committee reanalyzed SPOT/Dx pilot data applying PT program methods, adjusting for confounding conditions, and compared them to CAP NGS PT program performance (2019-2022).

Results.—: Overall detection rates of KRAS and NRAS single-nucleotide variants (SNVs) and multinucleotide variants (MNVs) by SPOT/Dx pilot laboratories were 96.8% (716 of 740) and 81.1% (129 of 159), respectively. In CAP PT programs, the overall detection rates for the same SNVs and MNVs were 97.2% (2671 of 2748) and 91.8% (1853 of 2019), respectively. In 2022, the overall detection rate for 5 KRAS and NRAS MNVs in CAP PT programs was 97.3% (1161 of 1193).

Conclusions.—: CAP PT program data demonstrate that laboratories consistently have high detection rates for KRAS and NRAS variants. The SPOT/Dx pilot has multiple design and analytic differences with established PT programs. Reanalyzed pilot data that adjust for confounding conditions demonstrate that laboratories proficiently detect SNVs and less successfully detect rare to never-observed MNVs. The SPOT/Dx pilot results are not generalizable to all molecular oncology testing and should not be used to market products or change policy affecting all molecular oncology testing.

上下文。--:据报道,关于分子肿瘤学下一代测序(NGS)的可持续预测肿瘤学治疗和诊断质量保证试点研究(SPOT/Dx试点)证明了NGS实验室开发的测试的性能局限性,包括与美国食品药品监督管理局批准的配套诊断的差异。SPOT/Dx试点方法与能力测试(PT)项目中使用的方法不同。目标。--:使用PT程序方法重新分析SPOT/Dx飞行员数据,并与PT程序数据进行比较。设计。--:美国病理学家学院(CAP)分子肿瘤学委员会应用PT程序方法重新分析了SPOT/Dx试点数据,调整了混杂条件,结果:SPOT/Dx中试实验室对KRAS和NRAS单核苷酸变异株(SNVs)和多核苷酸变异株(MNVs)的总体检测率分别为96.8%(716/740)和81.1%(129/159)。在CAP PT项目中,相同SNV和MNV的总体检测率分别为97.2%(2748例中的2671例)和91.8%(2019年的1853例)。2022年,CAP PT项目中5种KRAS和NRAS MNV的总体检测率为97.3%(1193例中有1161例)。结论:CAP PT项目数据表明,实验室对KRAS和NR变体的检测率一直很高。SPOT/Dx试点与已建立的PT项目在设计和分析方面存在多项差异。重新分析的飞行员数据调整了混杂条件,表明实验室能够熟练地检测SNV,而不太成功地检测罕见或从未观察到的MNV。SPOT/Dx试点结果不能推广到所有分子肿瘤学测试,也不应用于营销产品或改变影响所有分子肿瘤测试的政策。
{"title":"SPOT/Dx Pilot Reanalysis and College of American Pathologists Proficiency Testing for KRAS and NRAS Demonstrate Excellent Laboratory Performance.","authors":"Ahmet Zehir, Valentina Nardi, Eric Q Konnick, Christina M Lockwood, Thomas A Long, Nikoletta Sidiropoulos, Rhona J Souers, Patricia Vasalos, Neal I Lindeman, Joel T Moncur","doi":"10.5858/arpa.2023-0322-CP","DOIUrl":"10.5858/arpa.2023-0322-CP","url":null,"abstract":"<p><strong>Context.—: </strong>The Sustainable Predictive Oncology Therapeutics and Diagnostics quality assurance pilot study (SPOT/Dx pilot) on molecular oncology next-generation sequencing (NGS) reportedly demonstrated performance limitations of NGS laboratory-developed tests, including discrepancies with a US Food and Drug Administration-approved companion diagnostic. The SPOT/Dx pilot methods differ from those used in proficiency testing (PT) programs.</p><p><strong>Objective.—: </strong>To reanalyze SPOT/Dx pilot data using PT program methods and compare to PT program data.Also see p. 136.</p><p><strong>Design.—: </strong>The College of American Pathologists (CAP) Molecular Oncology Committee reanalyzed SPOT/Dx pilot data applying PT program methods, adjusting for confounding conditions, and compared them to CAP NGS PT program performance (2019-2022).</p><p><strong>Results.—: </strong>Overall detection rates of KRAS and NRAS single-nucleotide variants (SNVs) and multinucleotide variants (MNVs) by SPOT/Dx pilot laboratories were 96.8% (716 of 740) and 81.1% (129 of 159), respectively. In CAP PT programs, the overall detection rates for the same SNVs and MNVs were 97.2% (2671 of 2748) and 91.8% (1853 of 2019), respectively. In 2022, the overall detection rate for 5 KRAS and NRAS MNVs in CAP PT programs was 97.3% (1161 of 1193).</p><p><strong>Conclusions.—: </strong>CAP PT program data demonstrate that laboratories consistently have high detection rates for KRAS and NRAS variants. The SPOT/Dx pilot has multiple design and analytic differences with established PT programs. Reanalyzed pilot data that adjust for confounding conditions demonstrate that laboratories proficiently detect SNVs and less successfully detect rare to never-observed MNVs. The SPOT/Dx pilot results are not generalizable to all molecular oncology testing and should not be used to market products or change policy affecting all molecular oncology testing.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41144832","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Navigating Next-Generation Sequencing Laboratory Developed Tests: A Critical Look at Proficiency Testing, US Food and Drug Administration Regulations, and Clinical Laboratory Performance. 导航下一代测序实验室开发的测试:对能力测试、美国食品药品监督管理局条例和临床实验室性能的批判性审视。
Pub Date : 2024-02-01 DOI: 10.5858/arpa.2023-0477-ED
Shuko Harada, Alexander C Mackinnon
{"title":"Navigating Next-Generation Sequencing Laboratory Developed Tests: A Critical Look at Proficiency Testing, US Food and Drug Administration Regulations, and Clinical Laboratory Performance.","authors":"Shuko Harada, Alexander C Mackinnon","doi":"10.5858/arpa.2023-0477-ED","DOIUrl":"10.5858/arpa.2023-0477-ED","url":null,"abstract":"","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"71489876","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Correlation of Serum Galactose-Deficient IgA1 and Oxford Class in Cases of IgA Nephropathy. IgA 肾病病例血清缺失半乳糖 IgA1 与牛津分级的相关性
Pub Date : 2024-01-30 DOI: 10.5858/arpa.2023-0190-OA
Monika Shukla, Kiran Preet Malhotra, Abhilash Chandra, Namrata Sarvepalli Rao, Mohammad Kaleem Ahmad

Context.—: Galactose-deficient immunoglobulin A1 (Gd-IgA1) deposition in the renal mesangium plays a role in the pathogenesis of IgA nephropathy.

Objective.—: To assess the serum Gd-IgA1 level in biopsy-proven IgA nephropathy cases on diagnosis and 3 months post treatment and its relation with histologic Oxford classification.

Design.—: In this hospital-based prospective cohort study, 40 cases and 20 controls were enrolled. Serum samples of biopsy-proven IgA nephropathy cases collected on the day of biopsy and 3 months post treatment were evaluated. Solid-phase ELISA (enzyme-linked immunosorbent assay) was performed for assessment of Gd-IgA1 level. All renal biopsies were scored by using Oxford Classification (C-MEST score). The association of serum Gd-IgA1 levels with other established prognostic parameters was assessed. To estimate the prognostic value of markers, logistic regression analysis and Kruskal-Wallis ANOVA (analysis of variance) were used.

Results.—: Significant difference was observed in the serum Gd-IgA1 level values in the IgA nephropathy cases and healthy controls (P = .001) at baseline. However, no significant correlation between serum Gd-IgA1 levels at baseline and 3 months of follow-up (P = .31) or between baseline levels and age, proteinuria, hematuria, or estimated glomerular filtration rate was noted. There was no significant correlation between C-MEST score and serum Gd-IgA1 levels at baseline (P > .05); however, the distribution of Gd-IgA1 at 3 months was found to differ significantly between different grades of S score (P = .008).

Conclusions.—: Serum Gd-IgA1 levels may be of utility in predicting disease progression in IgA nephropathy cases. Measurement of serum Gd-IgA1 levels for the diagnosis and prognosis of IgA nephropathy may preclude the need for invasive renal biopsies.

背景在IgA肾病的发病机制中,肾间质中的半乳糖缺乏性免疫球蛋白A1(Gd-IgA1)沉积起了一定作用:评估活检证实的IgA肾病病例在确诊时和治疗后3个月的血清Gd-IgA1水平及其与组织学牛津分类的关系:在这项基于医院的前瞻性队列研究中,共纳入了 40 例病例和 20 例对照。对活检证实的 IgA 肾病病例在活检当天和治疗后 3 个月采集的血清样本进行了评估。固相酶联免疫吸附试验(ELISA)用于评估 Gd-IgA1 水平。所有肾活检均采用牛津分类法(C-MEST 评分)进行评分。评估了血清 Gd-IgA1 水平与其他既定预后参数的关联。为估算指标的预后价值,采用了逻辑回归分析和 Kruskal-Wallis ANOVA(方差分析):IgA肾病病例和健康对照组的血清Gd-IgA1水平在基线值上存在显著差异(P = .001)。然而,基线和随访 3 个月的血清 Gd-IgA1 水平之间(P = .31)或基线水平与年龄、蛋白尿、血尿或估计肾小球滤过率之间均无明显相关性。C-MEST评分与基线时的血清Gd-IgA1水平之间无明显相关性(P > .05);但3个月时的Gd-IgA1分布在S评分的不同等级之间存在明显差异(P = .008):结论:血清 Gd-IgA1 水平可能有助于预测 IgA 肾病病例的病情发展。测量血清 Gd-IgA1 水平用于 IgA 肾病的诊断和预后可避免进行侵入性肾活检。
{"title":"Correlation of Serum Galactose-Deficient IgA1 and Oxford Class in Cases of IgA Nephropathy.","authors":"Monika Shukla, Kiran Preet Malhotra, Abhilash Chandra, Namrata Sarvepalli Rao, Mohammad Kaleem Ahmad","doi":"10.5858/arpa.2023-0190-OA","DOIUrl":"https://doi.org/10.5858/arpa.2023-0190-OA","url":null,"abstract":"<p><strong>Context.—: </strong>Galactose-deficient immunoglobulin A1 (Gd-IgA1) deposition in the renal mesangium plays a role in the pathogenesis of IgA nephropathy.</p><p><strong>Objective.—: </strong>To assess the serum Gd-IgA1 level in biopsy-proven IgA nephropathy cases on diagnosis and 3 months post treatment and its relation with histologic Oxford classification.</p><p><strong>Design.—: </strong>In this hospital-based prospective cohort study, 40 cases and 20 controls were enrolled. Serum samples of biopsy-proven IgA nephropathy cases collected on the day of biopsy and 3 months post treatment were evaluated. Solid-phase ELISA (enzyme-linked immunosorbent assay) was performed for assessment of Gd-IgA1 level. All renal biopsies were scored by using Oxford Classification (C-MEST score). The association of serum Gd-IgA1 levels with other established prognostic parameters was assessed. To estimate the prognostic value of markers, logistic regression analysis and Kruskal-Wallis ANOVA (analysis of variance) were used.</p><p><strong>Results.—: </strong>Significant difference was observed in the serum Gd-IgA1 level values in the IgA nephropathy cases and healthy controls (P = .001) at baseline. However, no significant correlation between serum Gd-IgA1 levels at baseline and 3 months of follow-up (P = .31) or between baseline levels and age, proteinuria, hematuria, or estimated glomerular filtration rate was noted. There was no significant correlation between C-MEST score and serum Gd-IgA1 levels at baseline (P > .05); however, the distribution of Gd-IgA1 at 3 months was found to differ significantly between different grades of S score (P = .008).</p><p><strong>Conclusions.—: </strong>Serum Gd-IgA1 levels may be of utility in predicting disease progression in IgA nephropathy cases. Measurement of serum Gd-IgA1 levels for the diagnosis and prognosis of IgA nephropathy may preclude the need for invasive renal biopsies.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139577125","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Eosinophilic Solid and Cystic Renal Cell Carcinoma: Morphologic and Immunohistochemical Study of 18 Cases and Review of the Literature. 嗜酸性实性和囊性肾细胞癌:18 例病例的形态学和免疫组化研究及文献综述》(Eosinophilic Solid and Cystic Renal Cell Carcinoma: Morphologic and Immunohistochemical Study of 18 Cases and Review of the Literature.
Pub Date : 2024-01-29 DOI: 10.5858/arpa.2023-0122-OA
Qianru Guo, Xin Yao, Bo Yang, Lisha Qi, Frank Wang, Yuhong Guo, Yanxue Liu, Zi Cao, Yalei Wang, Jinpeng Wang, Lingmei Li, Qiujuan Huang, Changxu Liu, Tongyuan Qu, Wei Zhao, Danyang Ren, Manlin Yang, Chenhui Yan, Bin Meng, Cheng Wang, Wenfeng Cao

Context.—: Eosinophilic solid and cystic renal cell carcinoma is now defined in the 5th edition of the 2022 World Health Organization classification of urogenital tumors.

Objective.—: To perform morphologic, immunohistochemical, and preliminary genetic studies about this new entity in China for the purpose of understanding it better.

Design.—: The study includes 18 patients from a regional tertiary oncology center in northern China (Tianjin, China). We investigated the clinical and immunohistochemical features of these cases.

Results.—: The mean age of patients was 49.6 years and the male to female ratio was 11:7. Macroscopically, 1 case had the classic cystic and solid appearance whereas the others appeared purely solid. Microscopically, all 18 tumors shared similar solid and focal macrocystic or microcystic growth pattern, and the cells were characterized by voluminous and eosinophilic cytoplasm, along with coarse amphophilic stippling. Immunohistochemically, most of the tumors had a predominant cytokeratin (CK) 20-positive feature, ranging from focal cytoplasmic staining to diffuse membranous accentuation. Initially, we separated these cases into different immunohistochemical phenotypes. Group 1 (7 of 18; 38.5%) was characterized by positive phospho-4EBP1 and phospho-S6, which can imply hyperactive mechanistic target of rapamycin complex 1 (mTORC1) signaling. Group 2 (4 of 18; 23%) was negative for NF2, probably implying a germline mutation of NF2. Group 3 (7 of 18; 38.5%) consisted of the remaining cases. One case had metastatic spread and exhibited an aggressive clinical course, and we detected cyclin-dependent kinase inhibitor 2A (CDKN2A) mutation in this case; other patients were alive and without disease progression.

Conclusions.—: Our research proposes that eosinophilic solid and cystic renal cell carcinoma exhibits prototypical pathologic features with CK20 positivity and has aggressive potential.

背景嗜酸性实性和囊性肾细胞癌是目前世界卫生组织2022年第5版泌尿生殖系统肿瘤分类中的定义:在中国对这一新实体进行形态学、免疫组化和初步遗传学研究,以便更好地了解它:本研究包括来自中国北方(中国天津)一家地区性三级肿瘤中心的 18 名患者。我们研究了这些病例的临床和免疫组化特征:患者平均年龄为 49.6 岁,男女比例为 11:7。从宏观上看,1 例患者具有典型的囊实性外观,而其他患者则表现为纯实性。显微镜下,所有 18 例肿瘤都有类似的实性和局灶性大囊性或小囊性生长模式,细胞的特点是胞浆多且嗜酸性,伴有粗糙的嗜两性条纹。从免疫组化角度看,大多数肿瘤都以细胞角蛋白(CK)20阳性为主要特征,从局灶性细胞质染色到弥漫性膜状强化不等。最初,我们将这些病例分为不同的免疫组化表型。第 1 组(18 例中有 7 例,占 38.5%)的特征是磷酸化-4EBP1 和磷酸化-S6 阳性,这可能意味着雷帕霉素复合体 1(mTORC1)信号传导亢进。第 2 组(18 例中有 4 例,占 23%)NF2 阴性,可能意味着 NF2 基因突变。第 3 组(18 例中有 7 例,占 38.5%)由其余病例组成。其中一例患者出现转移扩散,临床表现凶险,我们在该例患者中检测到细胞周期蛋白依赖性激酶抑制剂 2A(CDKN2A)突变;其他患者均存活且无疾病进展:我们的研究表明,嗜酸性实性和囊性肾细胞癌具有CK20阳性的典型病理特征,并具有侵袭性。
{"title":"Eosinophilic Solid and Cystic Renal Cell Carcinoma: Morphologic and Immunohistochemical Study of 18 Cases and Review of the Literature.","authors":"Qianru Guo, Xin Yao, Bo Yang, Lisha Qi, Frank Wang, Yuhong Guo, Yanxue Liu, Zi Cao, Yalei Wang, Jinpeng Wang, Lingmei Li, Qiujuan Huang, Changxu Liu, Tongyuan Qu, Wei Zhao, Danyang Ren, Manlin Yang, Chenhui Yan, Bin Meng, Cheng Wang, Wenfeng Cao","doi":"10.5858/arpa.2023-0122-OA","DOIUrl":"https://doi.org/10.5858/arpa.2023-0122-OA","url":null,"abstract":"<p><strong>Context.—: </strong>Eosinophilic solid and cystic renal cell carcinoma is now defined in the 5th edition of the 2022 World Health Organization classification of urogenital tumors.</p><p><strong>Objective.—: </strong>To perform morphologic, immunohistochemical, and preliminary genetic studies about this new entity in China for the purpose of understanding it better.</p><p><strong>Design.—: </strong>The study includes 18 patients from a regional tertiary oncology center in northern China (Tianjin, China). We investigated the clinical and immunohistochemical features of these cases.</p><p><strong>Results.—: </strong>The mean age of patients was 49.6 years and the male to female ratio was 11:7. Macroscopically, 1 case had the classic cystic and solid appearance whereas the others appeared purely solid. Microscopically, all 18 tumors shared similar solid and focal macrocystic or microcystic growth pattern, and the cells were characterized by voluminous and eosinophilic cytoplasm, along with coarse amphophilic stippling. Immunohistochemically, most of the tumors had a predominant cytokeratin (CK) 20-positive feature, ranging from focal cytoplasmic staining to diffuse membranous accentuation. Initially, we separated these cases into different immunohistochemical phenotypes. Group 1 (7 of 18; 38.5%) was characterized by positive phospho-4EBP1 and phospho-S6, which can imply hyperactive mechanistic target of rapamycin complex 1 (mTORC1) signaling. Group 2 (4 of 18; 23%) was negative for NF2, probably implying a germline mutation of NF2. Group 3 (7 of 18; 38.5%) consisted of the remaining cases. One case had metastatic spread and exhibited an aggressive clinical course, and we detected cyclin-dependent kinase inhibitor 2A (CDKN2A) mutation in this case; other patients were alive and without disease progression.</p><p><strong>Conclusions.—: </strong>Our research proposes that eosinophilic solid and cystic renal cell carcinoma exhibits prototypical pathologic features with CK20 positivity and has aggressive potential.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139572358","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Concordance Between Biopsy and Resection Diagnoses of Uterine Cervical Adenocarcinoma According to the Updated World Health Organization 2020 Classification: A Multi-Institutional Study Elucidating Real-World Practice in Japan. 根据世界卫生组织 2020 年最新分类法,子宫颈腺癌活检诊断与切除诊断的一致性:阐明日本现实世界实践的多机构研究。
Pub Date : 2024-01-29 DOI: 10.5858/arpa.2023-0360-OA
Fumi Kawakami, Hiroyuki Yanai, Norihiro Teramoto, Yu Miyama, Masanori Yasuda, Sachiko Minamiguchi, Masami Iwamoto, Takako Kiyokawa, Yoshiki Mikami

Context.—: Endocervical adenocarcinoma is divided into human papillomavirus (HPV)-associated (HPVA) and HPV-independent (HPVI) in the 5h edition of the World Health Organization (WHO) tumor classification launched in 2020. However, the validity of the morphological criteria used for biopsy specimens in real-world practice remains undetermined.

Objective.—: To validate the utility of the 5th edition of the WHO classification for biopsy samples, focusing on its diagnostic criteria with the aid of ancillary studies.

Design.—: We retrieved 217 cases of endocervical adenocarcinoma from 6 institutions, in which glass slides of both biopsy and resection specimens were available for review. Concordance between the biopsy and resection specimen diagnoses was evaluated. For discordant diagnoses, an algorithmic approach with ancillary studies proposed by the international group was applied to confirm their utility to improve the accuracy of biopsy diagnosis.

Results.—: The biopsy diagnosis matched the resection specimen diagnosis in 197 cases (concordance rate, 91%; κ = 0.75). The concordance rate was significantly higher for HPVA than HPVI (95% versus 81%, P = .001). There were no significant differences in the proportions of HPVA and HPVI or the accuracy of biopsy diagnosis between the participating institutions. All 19 discordant cases with unstained glass slides available were accurately recategorized as HPVA or HPVI using HPV in situ hybridization; p16 immunohistochemistry was positive in 3 of 9 cases of gastric-type HPVI that were negative by in situ hybridization.

Conclusions.—: The 5th edition of the WHO criteria for biopsy diagnosis of endocervical adenocarcinoma distinguishes HPVA from HPVI well when ancillary studies are adequately applied.

背景:在世界卫生组织(WHO)2020年推出的第五版肿瘤分类中,宫颈内膜腺癌被分为人类乳头瘤病毒(HPV)相关型(HPVA)和HPV无关型(HPVI)。然而,在现实世界的实践中,活检标本所使用的形态学标准的有效性仍未确定:验证第五版世卫组织分类对活检样本的实用性,重点是借助辅助研究确定其诊断标准:我们从 6 家机构检索了 217 例宫颈内膜腺癌病例,其中活检和切除标本的玻璃切片均可供审查。对活检和切除标本诊断的一致性进行了评估。对于不一致的诊断,采用了国际研究小组提出的辅助研究算法,以确认其在提高活检诊断准确性方面的实用性:活检诊断与切除标本诊断相吻合的病例有 197 例(吻合率 91%;κ = 0.75)。HPVA 的吻合率明显高于 HPVI(95% 对 81%,P = .001)。参与研究的机构之间在 HPVA 和 HPVI 的比例或活检诊断的准确性方面没有明显差异。所有 19 例未染色玻片不一致的病例均通过 HPV 原位杂交准确地重新归类为 HPVA 或 HPVI;在 9 例原位杂交阴性的胃型 HPVI 中,有 3 例 p16 免疫组化呈阳性:结论:第五版世界卫生组织宫颈内膜腺癌活检诊断标准在充分应用辅助研究的情况下,能很好地区分HPVA和HPVI。
{"title":"Concordance Between Biopsy and Resection Diagnoses of Uterine Cervical Adenocarcinoma According to the Updated World Health Organization 2020 Classification: A Multi-Institutional Study Elucidating Real-World Practice in Japan.","authors":"Fumi Kawakami, Hiroyuki Yanai, Norihiro Teramoto, Yu Miyama, Masanori Yasuda, Sachiko Minamiguchi, Masami Iwamoto, Takako Kiyokawa, Yoshiki Mikami","doi":"10.5858/arpa.2023-0360-OA","DOIUrl":"https://doi.org/10.5858/arpa.2023-0360-OA","url":null,"abstract":"<p><strong>Context.—: </strong>Endocervical adenocarcinoma is divided into human papillomavirus (HPV)-associated (HPVA) and HPV-independent (HPVI) in the 5h edition of the World Health Organization (WHO) tumor classification launched in 2020. However, the validity of the morphological criteria used for biopsy specimens in real-world practice remains undetermined.</p><p><strong>Objective.—: </strong>To validate the utility of the 5th edition of the WHO classification for biopsy samples, focusing on its diagnostic criteria with the aid of ancillary studies.</p><p><strong>Design.—: </strong>We retrieved 217 cases of endocervical adenocarcinoma from 6 institutions, in which glass slides of both biopsy and resection specimens were available for review. Concordance between the biopsy and resection specimen diagnoses was evaluated. For discordant diagnoses, an algorithmic approach with ancillary studies proposed by the international group was applied to confirm their utility to improve the accuracy of biopsy diagnosis.</p><p><strong>Results.—: </strong>The biopsy diagnosis matched the resection specimen diagnosis in 197 cases (concordance rate, 91%; κ = 0.75). The concordance rate was significantly higher for HPVA than HPVI (95% versus 81%, P = .001). There were no significant differences in the proportions of HPVA and HPVI or the accuracy of biopsy diagnosis between the participating institutions. All 19 discordant cases with unstained glass slides available were accurately recategorized as HPVA or HPVI using HPV in situ hybridization; p16 immunohistochemistry was positive in 3 of 9 cases of gastric-type HPVI that were negative by in situ hybridization.</p><p><strong>Conclusions.—: </strong>The 5th edition of the WHO criteria for biopsy diagnosis of endocervical adenocarcinoma distinguishes HPVA from HPVI well when ancillary studies are adequately applied.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139572337","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Development of an FRα Companion Diagnostic Immunohistochemical Assay for Mirvetuximab Soravtansine. 开发米韦妥昔单抗索拉坦星的 FRα 辅助诊断免疫组化测定。
Pub Date : 2024-01-29 DOI: 10.5858/arpa.2023-0149-OA
Racheal L James, Taryn Sisserson, Zhuangyu Cai, Megan E Dumas, Landon J Inge, James Ranger-Moore, Albert Mason, Callum M Sloss, Katherine McArthur

Context.—: Folate receptor-α (FRα, encoded by the FOLR1 gene) is overexpressed in several solid tumor types, including epithelial ovarian cancer (EOC), making it an attractive biomarker and target for FRα-based therapy in ovarian cancer.

Objective.—: To describe the development, analytic verification, and clinical performance of the VENTANA FOLR1 Assay (Ventana Medical Systems Inc) in EOC.

Design.—: We used industry standard studies to establish the analytic verification of the VENTANA FOLR1 Assay. Furthermore, the VENTANA FOLR1 Assay was used in the ImmunoGen Inc-sponsored SORAYA study to select patients for treatment with mirvetuximab soravtansine (MIRV) in platinum-resistant EOC.

Results.—: The VENTANA FOLR1 Assay is highly reproducible, demonstrated by a greater than 98% overall percent agreement (OPA) for repeatability and intermediate precision studies, greater than 93% OPA for interreader and greater than 96% for intrareader studies, and greater than 90% OPA across all observations in the interlaboratory reproducibility study. The performance of the VENTANA FOLR1 Assay in the SORAYA study was evaluated by the overall staining acceptability rate, which was calculated using the number of patient specimens that were tested with the VENTANA FOLR1 Assay that had an evaluable result. In the SORAYA trial, data in patients who received MIRV demonstrated clinically meaningful efficacy, and the overall staining acceptability rate of the assay was 98.4%, demonstrating that the VENTANA FOLR1 Assay is safe and effective for selecting patients who may benefit from MIRV. Together, these data showed that the assay is highly reliable, consistently producing evaluable results in the clinical setting.

Conclusions.—: The VENTANA FOLR1 Assay is a robust and reproducible assay for detecting FRα expression and identifying a patient population that derived clinically meaningful benefit from MIRV in the SORAYA study.

背景叶酸受体-α(FRα,由 FOLR1 基因编码)在包括上皮性卵巢癌(EOC)在内的几种实体瘤类型中过度表达,使其成为一种有吸引力的生物标记物和基于 FRα 的卵巢癌治疗靶点:描述 VENTANA FOLR1 检测试剂盒(Ventana Medical Systems Inc)在 EOC 中的开发、分析验证和临床表现:我们采用行业标准研究来确定 VENTANA FOLR1 检测试剂盒的分析验证。此外,VENTANA FOLR1检测法还被用于ImmunoGen公司赞助的SORAYA研究,以选择接受米韦曲单抗(MIRV)治疗的铂类耐药EOC患者:VENTANA FOLR1测定的可重复性很高,这体现在重复性和中间精度研究的总百分数一致率(OPA)超过98%,读数器间研究的OPA超过93%,读数器内研究的OPA超过96%,实验室间可重复性研究中所有观察指标的OPA超过90%。在 SORAYA 研究中,VENTANA FOLR1 检测试剂盒的性能是通过总体染色可接受性率来评估的,而总体染色可接受性率是通过使用 VENTANA FOLR1 检测试剂盒检测并得出可评估结果的患者标本数量来计算的。在 SORAYA 试验中,接受 MIRV 治疗的患者的数据显示出了有临床意义的疗效,该检测方法的总体染色可接受性为 98.4%,这表明 VENTANA FOLR1 检测方法在选择可能从 MIRV 中获益的患者方面是安全有效的。这些数据共同表明,该检测方法非常可靠,能在临床环境中持续产生可评估的结果:VENTANA FOLR1 检测试剂盒是一种稳健且可重复的检测试剂盒,可用于检测 FRα 的表达,并在 SORAYA 研究中确定可从 MIRV 中获得有临床意义的获益的患者群体。
{"title":"Development of an FRα Companion Diagnostic Immunohistochemical Assay for Mirvetuximab Soravtansine.","authors":"Racheal L James, Taryn Sisserson, Zhuangyu Cai, Megan E Dumas, Landon J Inge, James Ranger-Moore, Albert Mason, Callum M Sloss, Katherine McArthur","doi":"10.5858/arpa.2023-0149-OA","DOIUrl":"https://doi.org/10.5858/arpa.2023-0149-OA","url":null,"abstract":"<p><strong>Context.—: </strong>Folate receptor-α (FRα, encoded by the FOLR1 gene) is overexpressed in several solid tumor types, including epithelial ovarian cancer (EOC), making it an attractive biomarker and target for FRα-based therapy in ovarian cancer.</p><p><strong>Objective.—: </strong>To describe the development, analytic verification, and clinical performance of the VENTANA FOLR1 Assay (Ventana Medical Systems Inc) in EOC.</p><p><strong>Design.—: </strong>We used industry standard studies to establish the analytic verification of the VENTANA FOLR1 Assay. Furthermore, the VENTANA FOLR1 Assay was used in the ImmunoGen Inc-sponsored SORAYA study to select patients for treatment with mirvetuximab soravtansine (MIRV) in platinum-resistant EOC.</p><p><strong>Results.—: </strong>The VENTANA FOLR1 Assay is highly reproducible, demonstrated by a greater than 98% overall percent agreement (OPA) for repeatability and intermediate precision studies, greater than 93% OPA for interreader and greater than 96% for intrareader studies, and greater than 90% OPA across all observations in the interlaboratory reproducibility study. The performance of the VENTANA FOLR1 Assay in the SORAYA study was evaluated by the overall staining acceptability rate, which was calculated using the number of patient specimens that were tested with the VENTANA FOLR1 Assay that had an evaluable result. In the SORAYA trial, data in patients who received MIRV demonstrated clinically meaningful efficacy, and the overall staining acceptability rate of the assay was 98.4%, demonstrating that the VENTANA FOLR1 Assay is safe and effective for selecting patients who may benefit from MIRV. Together, these data showed that the assay is highly reliable, consistently producing evaluable results in the clinical setting.</p><p><strong>Conclusions.—: </strong>The VENTANA FOLR1 Assay is a robust and reproducible assay for detecting FRα expression and identifying a patient population that derived clinically meaningful benefit from MIRV in the SORAYA study.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139572338","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Assessment of Pathology Domain-Specific Knowledge of ChatGPT and Comparison to Human Performance. 评估 ChatGPT 的病理学领域特定知识并与人类表现进行比较。
Pub Date : 2024-01-20 DOI: 10.5858/arpa.2023-0296-OA
Andrew Y Wang, Sherman Lin, Christopher Tran, Robert J Homer, Dan Wilsdon, Joanna C Walsh, Emily A Goebel, Irene Sansano, Snehal Sonawane, Vincent Cockenpot, Sanjay Mukhopadhyay, Toros Taskin, Nusrat Zahra, Luca Cima, Orhan Semerci, Birsen Gizem Özamrak, Pallavi Mishra, Naga Sarika Vennavalli, Po-Hsuan Cameron Chen, Matthew J Cecchini

Context.—: Artificial intelligence algorithms hold the potential to fundamentally change many aspects of society. Application of these tools, including the publicly available ChatGPT, has demonstrated impressive domain-specific knowledge in many areas, including medicine.

Objectives.—: To understand the level of pathology domain-specific knowledge for ChatGPT using different underlying large language models, GPT-3.5 and the updated GPT-4.

Design.—: An international group of pathologists (n = 15) was recruited to generate pathology-specific questions at a similar level to those that could be seen on licensing (board) examinations. The questions (n = 15) were answered by GPT-3.5, GPT-4, and a staff pathologist that recently passed their Canadian pathology licensing exams. Participants were instructed to score answers on a 5-point scale and to predict which answer was written by ChatGPT.

Results.—: GPT-3.5 performed at a similar level to the staff pathologist, while GPT-4 outperformed both. The overall score for both GPT-3.5 and GPT-4 was within the range of meeting expectations for a trainee writing licensing examinations. In all but one question, the reviewers were able to correctly identify the answers generated by GPT-3.5.

Conclusions.—: By demonstrating the ability of ChatGPT to answer pathology-specific questions at a level similar to (GPT-3.5) or exceeding (GPT-4) a trained pathologist, this study highlights the potential of large language models to be transformative in this space. In the future, more advanced iterations of these algorithms with increased domain-specific knowledge may have the potential to assist pathologists and enhance pathology resident training.

背景:人工智能算法有可能从根本上改变社会的许多方面。这些工具的应用,包括公开的 ChatGPT,已经在包括医学在内的许多领域展示了令人印象深刻的特定领域知识:使用不同的底层大型语言模型(GPT-3.5 和更新版 GPT-4)了解 ChatGPT 的病理学特定领域知识水平:设计:招募了一组国际病理学家(n = 15)来生成病理学特定问题,这些问题的水平与执照(委员会)考试中可能出现的问题水平相似。这些问题(n = 15)由 GPT-3.5、GPT-4 和一位最近通过加拿大病理学执业资格考试的病理学家回答。参与者被要求按 5 分制打分,并预测哪个答案是由 ChatGPT.Results.- 撰写的:结果:GPT-3.5 的表现与病理学家相似,而 GPT-4 的表现则优于两者。GPT-3.5 和 GPT-4 的总成绩都在达到编写执业资格考试试卷的受训人员的预期范围之内。除一道题外,评审人员都能正确识别 GPT-3.5.Conclusions.- 生成的答案:通过展示 ChatGPT 回答病理学特定问题的能力,其水平接近(GPT-3.5)或超过(GPT-4)训练有素的病理学家,本研究强调了大型语言模型在这一领域的变革潜力。未来,这些算法的更高级迭代与特定领域知识的增加可能会为病理学家提供帮助,并加强病理住院医师的培训。
{"title":"Assessment of Pathology Domain-Specific Knowledge of ChatGPT and Comparison to Human Performance.","authors":"Andrew Y Wang, Sherman Lin, Christopher Tran, Robert J Homer, Dan Wilsdon, Joanna C Walsh, Emily A Goebel, Irene Sansano, Snehal Sonawane, Vincent Cockenpot, Sanjay Mukhopadhyay, Toros Taskin, Nusrat Zahra, Luca Cima, Orhan Semerci, Birsen Gizem Özamrak, Pallavi Mishra, Naga Sarika Vennavalli, Po-Hsuan Cameron Chen, Matthew J Cecchini","doi":"10.5858/arpa.2023-0296-OA","DOIUrl":"https://doi.org/10.5858/arpa.2023-0296-OA","url":null,"abstract":"<p><strong>Context.—: </strong>Artificial intelligence algorithms hold the potential to fundamentally change many aspects of society. Application of these tools, including the publicly available ChatGPT, has demonstrated impressive domain-specific knowledge in many areas, including medicine.</p><p><strong>Objectives.—: </strong>To understand the level of pathology domain-specific knowledge for ChatGPT using different underlying large language models, GPT-3.5 and the updated GPT-4.</p><p><strong>Design.—: </strong>An international group of pathologists (n = 15) was recruited to generate pathology-specific questions at a similar level to those that could be seen on licensing (board) examinations. The questions (n = 15) were answered by GPT-3.5, GPT-4, and a staff pathologist that recently passed their Canadian pathology licensing exams. Participants were instructed to score answers on a 5-point scale and to predict which answer was written by ChatGPT.</p><p><strong>Results.—: </strong>GPT-3.5 performed at a similar level to the staff pathologist, while GPT-4 outperformed both. The overall score for both GPT-3.5 and GPT-4 was within the range of meeting expectations for a trainee writing licensing examinations. In all but one question, the reviewers were able to correctly identify the answers generated by GPT-3.5.</p><p><strong>Conclusions.—: </strong>By demonstrating the ability of ChatGPT to answer pathology-specific questions at a level similar to (GPT-3.5) or exceeding (GPT-4) a trained pathologist, this study highlights the potential of large language models to be transformative in this space. In the future, more advanced iterations of these algorithms with increased domain-specific knowledge may have the potential to assist pathologists and enhance pathology resident training.</p>","PeriodicalId":93883,"journal":{"name":"Archives of pathology & laboratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139514343","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Archives of pathology & laboratory medicine
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1