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Do all patients with cancer thrombosis have the same risk of bleeding and recurrence? Particularities of lung cancer. 是否所有癌症血栓患者都有同样的出血和复发风险?肺癌的特殊性。
Pub Date : 2024-01-01 Epub Date: 2024-03-18 DOI: 10.1080/17476348.2024.2331750
Laurent Bertoletti, Ludovic Lafaie, Thibault LeConte, Anne-Laure Desage, Bastien Petit, Lutfi Ozturk, Sandrine Accassat, Pauline Corbaux, Géraldine Poenou
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引用次数: 0
Diversity in pulmonary rehabilitation clinical trials: a systematic review of the literature. 肺康复临床试验的多样性:文献系统回顾。
Pub Date : 2024-01-01 Epub Date: 2024-03-06 DOI: 10.1080/17476348.2024.2324086
Sunaina Chopra, Shivani Rana, Reenal Patel, Tessa Hamilton, Alyssa Dalip, Paramvir Malhi, Pat G Camp

Background: Underrepresentation of minority groups in clinical trials may hinder the potential benefits of pulmonary rehabilitation (PR) programs for individuals with chronic obstructive pulmonary disease (COPD). The aim of this work was to determine whether participants in PR randomized control trials (RCTs) conducted in the U.S.A., Canada, the UK, and Australia are representative of ethnicity, sex, gender, and sociodemographic characteristics.

Research design: A systematic search was performed for relevant literature from inception to December 2022. Titles and abstracts were screened before undergoing a full article review. Relevant data on reporting of age, sex, gender, ethnicity, and sociodemographic characteristics of participants was extracted.

Results: Thirty-six RCTs met the inclusion criteria. Only 6% of publications reported on ethnicity, with ≥90% of participants reported as 'White.' All 36 papers reported on age, with the mean between 60 and 69 years old. Thirty-five studies reported on sex (97%), with the majority (67%) reporting more male than female participants. There was no mention of different genders in any paper. Other sociodemographic factors were reported in 7 (19%) papers.

Conclusions: Inclusivity and representation in clinical trials are essential to ensure that research findings are generalizable. Clinical trialists need to consider the demographics of today's society during recruitment.

背景:少数群体在临床试验中的代表性不足可能会阻碍肺康复 (PR) 项目为慢性阻塞性肺病 (COPD) 患者带来的潜在益处。这项工作旨在确定在美国、加拿大、英国和澳大利亚进行的肺康复随机对照试验(RCT)的参与者在种族、性别和社会人口特征方面是否具有代表性:对从开始到 2022 年 12 月的相关文献进行了系统检索。在进行全文审阅之前,对标题和摘要进行了筛选。提取了报告参与者年龄、性别、民族和社会人口特征的相关数据:结果:36 篇研究性临床试验符合纳入标准。只有 6% 的论文报告了种族情况,其中≥ 90% 的参与者被报告为 "白人"。所有 36 篇论文都报告了年龄,平均年龄在 60-69 岁之间。35 项研究报告了性别(97%),其中大多数(67%)报告的男性参与者多于女性参与者。没有一篇论文提到不同的性别。7篇论文(19%)报告了其他社会人口因素:临床试验的包容性和代表性对于确保研究结果的普遍性至关重要。临床试验人员在招募过程中需要考虑当今社会的人口统计学因素。
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引用次数: 0
Hypercapnia and its relationship with respiratory infections. 高碳酸血症及其与呼吸道感染的关系。
Pub Date : 2024-01-01 Epub Date: 2024-03-19 DOI: 10.1080/17476348.2024.2331767
Elena Campaña-Duel, Adrian Ceccato, Luis Morales-Quinteros, Marta Camprubí-Rimblas, Antonio Artigas

Introduction: Hypercapnia is developed in patients with acute and/or chronic respiratory conditions. Clinical data concerning hypercapnia and respiratory infections interaction is limited.

Areas covered: Currently, the relationship between hypercapnia and respiratory infections remains unclear. In this review, we summarize studies on the effects of hypercapnia on models of pulmonary infections to clarify the role of elevated CO2 in these pulmonary pathologies. Hypercapnia affects different cell types in the alveoli, leading to changes in the immune response. In vitro studies show that hypercapnia downregulates the NF-κβ pathway, reduces inflammation and impairs epithelial wound healing. While in vivo models show a dual role between short- and long-term effects of hypercapnia on lung infection. However, it is still controversial whether the effects observed under hypercapnia are pH dependent or not.

Expert opinion: The role of hypercapnia is still a controversial debate. Hypercapnia could play a beneficial role in mechanically ventilated models, by lowering the inflammation produced by the stretch condition. But it could be detrimental in infectious scenarios, causing phagocyte dysfunction and lack of infection control. Further data concerning hypercapnia on respiratory infections is needed to elucidate this interaction.

导言急性和/或慢性呼吸道疾病患者会出现高碳酸血症。有关高碳酸血症与呼吸道感染相互作用的临床数据十分有限:目前,高碳酸血症与呼吸道感染之间的关系仍不明确。在这篇综述中,我们总结了有关高碳酸血症对肺部感染模型影响的研究,以阐明二氧化碳升高在这些肺部病变中的作用。高碳酸血症会影响肺泡中不同类型的细胞,导致免疫反应发生变化。体外研究表明,高碳酸血症会下调 NF-κβ 通路、减少炎症反应并损害上皮伤口愈合。而体内模型显示,高碳酸血症对肺部感染具有短期和长期效应的双重作用。然而,在高碳酸血症下观察到的影响是否依赖于 pH 值仍存在争议:专家观点:高碳酸血症的作用仍存在争议。在机械通气模型中,高碳酸血症可通过降低拉伸条件下产生的炎症而发挥有益作用。但在感染情况下,高碳酸血症可能会导致吞噬细胞功能障碍和感染控制不力,从而对人体不利。需要更多有关高碳酸血症对呼吸道感染的数据来阐明这种相互作用。
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引用次数: 0
Indications and evidence for domiciliary noninvasive ventilation. 家用无创通气的适应症和证据。
Pub Date : 2023-12-01 Epub Date: 2023-12-27 DOI: 10.1080/17476348.2023.2295941
Anita Saigal, Amar J Shah, Swapna Mandal

Introduction: Home noninvasive ventilation (HNIV) has expanded globally, with a greater evidence base for its use. HNIV improves multiple patient related outcomes in patients with chronic hypercapnic respiratory failure. Obesity hypoventilation syndrome (OHS) is rapidly taking over as the primary indication for HNIV and COPD patients who overlap with obstructive sleep apnea hypoventilation syndromes (OSAHS) and are increasingly recognized but add to the complexity of HNIV prescribing. Optimal settings vary for differing diseases, with higher inspiratory pressures often required in those with OHS and COPD, yet which settings translate into greatest patient benefit remains unknown.

Areas covered: We cover the evidence base underpinning the common indications for HNIV in COPD, OHS, neuromuscular disease (NMD), and chest wall disease (CWD) and highlight common HNIV modes used.

Expert opinion: Active screening for nocturnal hypoventilation in OHS and COPD may be important to guide earlier ventilation. Further research on which HNIV modalities best improve patient related outcomes and the right time for initiation in different patient phenotypes is rapidly needed. Worldwide, clinical research trials should aim to bridge the gap by reporting on patient-related outcomes and cost effectiveness in real-world populations to best understand the true benefit of HNIV amongst heterogenous patient populations.

导言:家庭无创通气(HNIV)已在全球范围内得到推广,其使用也有了更多的证据基础。HNIV 可改善慢性高碳酸血症呼吸衰竭患者的多种相关预后。肥胖低通气综合征(OHS)正迅速成为 HNIV 的主要适应症,而与阻塞性睡眠呼吸暂停低通气综合征(OSAHS)重叠的慢性阻塞性肺疾病患者也越来越多地被认识到,但这也增加了 HNIV 处方的复杂性。不同疾病的最佳设置各不相同,阻塞性睡眠呼吸暂停低通气综合征和慢性阻塞性肺病患者通常需要更高的吸气压力,但哪种设置能为患者带来最大益处仍是未知数:我们介绍了慢性阻塞性肺病、OHS、神经肌肉疾病(NMD)和胸壁疾病(CWD)中常见的 HNIV 适应症的证据基础,并重点介绍了常用的 HNIV 模式:专家意见:积极筛查 OHS 和 COPD 患者的夜间通气不足对于指导早期通气可能非常重要。目前急需进一步研究哪种 HNIV 模式能最好地改善患者相关预后,以及在不同患者表型中启动通气的正确时间。世界范围内的临床研究试验应旨在通过报告真实人群中与患者相关的疗效和成本效益来缩小差距,从而更好地了解 HNIV 在不同患者人群中的真正益处。
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引用次数: 0
First-line immunotherapy in non-small cell lung cancer: how to select and where to go. 非小细胞肺癌的一线免疫疗法:如何选择,何去何从?
Pub Date : 2023-12-01 Epub Date: 2024-02-09 DOI: 10.1080/17476348.2024.2302356
Andrea Mogavero, Ornella Cantale, Veronica Mollica, Shobana Anpalakhan, Alfredo Addeo, Giannis Mountzios, Alex Friedlaender, Ravindran Kanesvaran, Silvia Novello, Giuseppe Luigi Banna

Introduction: Immunotherapy (IO) has established a new milestone in lung cancer treatment. Several registrational studies have approved immune checkpoint inhibitors (ICIs) in different settings, including the metastatic nonsmall cell lung cancer (NSCLC). As well known, responders are just a certain proportion of patients; therefore, their selection by using predictive factors has stood out as a crucial issue to address in tailoring a patient-centered care.

Areas covered: In our review we propose a detailed yet handy cross section on ICIs as first-line treatment in metastatic NSCLC, regarding indications, histological, clinical, and blood-based biomarkers, other than their mechanisms of resistance and new immunological actionable targets. We performed a literature search through PubMed entering keywords complying with crucial features of immunotherapy.

Expert opinion: IO represents the backbone of lung cancer treatment. Trials are currently testing novel immune blockade agents assessing combinatorial approaches with standard ICIs, or antibody drug conjugates (ADC), harboring immunological targets. Perfecting patients' selection is an ongoing challenge and a more and more urgent need in order to best predict responders who will consistently benefit from it.

简介:免疫疗法(IO)为肺癌治疗树立了新的里程碑:免疫疗法(IO)为肺癌治疗树立了新的里程碑。一些注册研究已经批准了免疫检查点抑制剂(ICIs)在不同情况下的应用,包括转移性非小细胞肺癌(NSCLC)。众所周知,应答者只是患者中的一部分,因此利用预测因素来选择应答者已成为以患者为中心的治疗中需要解决的关键问题:在我们的综述中,我们就 ICIs 作为转移性 NSCLC 一线治疗的适应症、组织学、临床和血液生物标志物,以及其耐药机制和新的免疫学可操作靶点等方面进行了详细而便捷的横向分析。我们在PubMed上输入符合免疫疗法关键特征的关键词进行了文献检索:免疫疗法是肺癌治疗的支柱。目前的试验正在测试新型免疫阻断剂,评估与标准 ICIs 或抗体药物结合物(ADC)的组合方法,这些药物都含有免疫靶点。完善患者的选择是一项持续的挑战,也是一项越来越迫切的需求,以便最好地预测将持续从中受益的应答者。
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引用次数: 0
Extracorporeal membrane oxygenation for cardiac arrest: what, when, why, and how. 体外膜氧合治疗心脏骤停:什么,何时,为什么,以及如何。
Pub Date : 2023-12-01 Epub Date: 2023-11-29 DOI: 10.1080/17476348.2023.2288160
Matthew Brandorff, Clark G Owyang, Joseph E Tonna

Introduction: Extracorporeal membrane oxygenation (ECMO) facilitated resuscitation was first described in the 1960s, but only recently garnered increased attention with large observational studies and randomized trials evaluating its use.

Areas covered: In this comprehensive review of extracorporeal cardiopulmonary resuscitation (ECPR), we report the history of resuscitative ECMO, terminology, circuit configuration and cannulation considerations, complications, selection criteria, implementation and management, and important considerations for the provider. We review the relevant guidelines, different approaches to cannulation, postresuscitation management, and expected outcomes, including neurologic, cardiac, and hospital survival. Finally, we advocate for the participation in national/international Registries in order to facilitate continuous quality improvement and support scientific discovery in this evolving area.

Expert opinion: ECPR is the most disruptive technology in cardiac arrest resuscitation since high-quality CPR itself. ECPR has demonstrated that it can provide up to 30% increased odds of survival for refractory cardiac arrest, in tightly restricted systems and for select patients. It is also clear, though, from recent trials that ECPR will not confer this high survival when implemented in less tightly protocoled settings and within lower volume environments. Over the next 10 years, ECPR research will explore the optimal initiation thresholds, best practices for implementation, and postresuscitation care.

引言:体外膜氧合(ECMO)促进复苏在20世纪60年代首次被描述,但直到最近才引起了越来越多的关注,大量观察性研究和随机试验评估了其应用。涵盖领域:在这篇体外心肺复苏(ECPR)的综合综述中,我们报告了复苏ECMO的历史,术语,电路配置和插管注意事项,并发症,选择标准,实施和管理,以及提供者的重要注意事项。我们回顾了相关指南、不同的插管方法、复苏后管理和预期结果,包括神经系统、心脏和医院生存。最后,我们提倡参与国家/国际注册,以促进持续的质量改进和支持这一不断发展的领域的科学发现。专家意见:ECPR是继高质量CPR之后最具颠覆性的心脏骤停复苏技术。ECPR已经证明,在严格限制的系统和特定患者中,它可以将难治性心脏骤停的生存率提高30%。然而,从最近的试验中也可以清楚地看出,当在不太严格的协议设置和低容量环境中实施ECPR时,不会赋予这种高生存率。未来10年,ECPR研究将探索最佳启动阈值、最佳实施方法和复苏后护理。
{"title":"Extracorporeal membrane oxygenation for cardiac arrest: what, when, why, and how.","authors":"Matthew Brandorff, Clark G Owyang, Joseph E Tonna","doi":"10.1080/17476348.2023.2288160","DOIUrl":"10.1080/17476348.2023.2288160","url":null,"abstract":"<p><strong>Introduction: </strong>Extracorporeal membrane oxygenation (ECMO) facilitated resuscitation was first described in the 1960s, but only recently garnered increased attention with large observational studies and randomized trials evaluating its use.</p><p><strong>Areas covered: </strong>In this comprehensive review of extracorporeal cardiopulmonary resuscitation (ECPR), we report the history of resuscitative ECMO, terminology, circuit configuration and cannulation considerations, complications, selection criteria, implementation and management, and important considerations for the provider. We review the relevant guidelines, different approaches to cannulation, postresuscitation management, and expected outcomes, including neurologic, cardiac, and hospital survival. Finally, we advocate for the participation in national/international Registries in order to facilitate continuous quality improvement and support scientific discovery in this evolving area.</p><p><strong>Expert opinion: </strong>ECPR is the most disruptive technology in cardiac arrest resuscitation since high-quality CPR itself. ECPR has demonstrated that it can provide up to 30% increased odds of survival for refractory cardiac arrest, in tightly restricted systems and for select patients. It is also clear, though, from recent trials that ECPR will not confer this high survival when implemented in less tightly protocoled settings and within lower volume environments. Over the next 10 years, ECPR research will explore the optimal initiation thresholds, best practices for implementation, and postresuscitation care.</p>","PeriodicalId":94007,"journal":{"name":"Expert review of respiratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10922429/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138441883","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Bayesian or frequentist: there is no question when comparing single-inhaler triple therapies via network meta-analysis. Focus on fluticasone furoate/umeclidinium/vilanterol fixed-dose combination in chronic obstructive pulmonary disease. 贝叶斯主义还是频数主义:通过网络荟萃分析比较单吸入器三联疗法是毫无疑问的。聚焦慢性阻塞性肺病中的糠酸氟替卡松/优甲乐/维兰特罗固定剂量组合。
Pub Date : 2023-12-01 Epub Date: 2024-02-16 DOI: 10.1080/17476348.2024.2316167
Luigino Calzetta, Paola Rogliani

Objectives: Single-inhaler triple therapies (SITTs) have never been directly compared in randomized controlled trials (RCTs) in chronic obstructive pulmonary disease (COPD). Cochrane recommends the Bayesian approach for indirect comparisons but a frequentist network meta-analysis (NMA) reported superiority of fluticasone furoate/umeclidinium/vilanterol (FF/UMEC/VI) over other SITT. We assessed the most appropriate inference method for NMA characterized by between-study heterogeneity on SITT in COPD.

Methods: Bayesian and frequentist NMA were performed on RCTs investigating the effect of SITT on exacerbations and trough forced expiratory volume in the 1st second (FEV1) in COPD.

Results: The included RCTs (ETHOS, FULFIL, IMPACT, KRONOS 200812) reported significant between-study heterogeneity (I2 > 99%, p < 0.001). The Bayesian random-effect NMA provided unbiased evidence that FF/UMEC/VI was not superior to other SITT on exacerbations and trough FEV1. The frequentist fixed-effect NMA indicated that FF/UMEC/VI was significantly (p < 0.05) more effective than other SITT, although results were affected by dispersion, asymmetry, and significant risk of bias. Frequentist random-effect NMA provided effect estimates rather similar but not equal to those of Bayesian approach.

Conclusion: Indirect comparison should be performed via Bayesian approach instead of frequentist inference with a fixed-effect model. Claiming the superiority of a specific medication over other therapies should be confirmed by findings originating from well-designed RCTs.

目的:在慢性阻塞性肺病(COPD)的随机对照试验(RCT)中,从未对单吸入器三联疗法(SITT)进行过直接比较。Cochrane 建议采用贝叶斯方法进行间接比较,但一项频谱网络荟萃分析(NMA)报告称,糠酸氟替卡松/乌甲地尼/维兰特罗(FF/UMEC/VI)优于其他 SITT。我们评估了以慢性阻塞性肺病 SITT 研究间异质性为特征的 NMA 最合适的推断方法:对研究 SITT 对慢性阻塞性肺病患者病情加重和一秒钟内用力呼气容积(FEV1)谷值影响的 RCT 进行了贝叶斯和频数主义 NMA:结果:纳入的 RCT(ETHOS、FULFIL、IMPACT、KRONOS 200,812)报告了显著的研究间异质性(I2>99%,p 1)。频繁主义固定效应 NMA 表明,FF/UMEC/VI 具有显著的异质性(p 结论:FF/UMEC/VI 与 FF/UMEC/VI 之间存在显著的异质性:应通过贝叶斯方法进行间接比较,而不是使用固定效应模型进行频繁推断。声称某种特定药物优于其他疗法,应通过设计良好的 RCT 研究结果来证实。
{"title":"Bayesian or frequentist: there is no question when comparing single-inhaler triple therapies via network meta-analysis. Focus on fluticasone furoate/umeclidinium/vilanterol fixed-dose combination in chronic obstructive pulmonary disease.","authors":"Luigino Calzetta, Paola Rogliani","doi":"10.1080/17476348.2024.2316167","DOIUrl":"10.1080/17476348.2024.2316167","url":null,"abstract":"<p><strong>Objectives: </strong>Single-inhaler triple therapies (SITTs) have never been directly compared in randomized controlled trials (RCTs) in chronic obstructive pulmonary disease (COPD). Cochrane recommends the Bayesian approach for indirect comparisons but a frequentist network meta-analysis (NMA) reported superiority of fluticasone furoate/umeclidinium/vilanterol (FF/UMEC/VI) over other SITT. We assessed the most appropriate inference method for NMA characterized by between-study heterogeneity on SITT in COPD.</p><p><strong>Methods: </strong>Bayesian and frequentist NMA were performed on RCTs investigating the effect of SITT on exacerbations and trough forced expiratory volume in the 1<sup>st</sup> second (FEV<sub>1</sub>) in COPD.</p><p><strong>Results: </strong>The included RCTs (ETHOS, FULFIL, IMPACT, KRONOS 200812) reported significant between-study heterogeneity (I<sup>2</sup> > 99%, <i>p</i> < 0.001). The Bayesian random-effect NMA provided unbiased evidence that FF/UMEC/VI was not superior to other SITT on exacerbations and trough FEV<sub>1</sub>. The frequentist fixed-effect NMA indicated that FF/UMEC/VI was significantly (<i>p</i> < 0.05) more effective than other SITT, although results were affected by dispersion, asymmetry, and significant risk of bias. Frequentist random-effect NMA provided effect estimates rather similar but not equal to those of Bayesian approach.</p><p><strong>Conclusion: </strong>Indirect comparison should be performed via Bayesian approach instead of frequentist inference with a fixed-effect model. Claiming the superiority of a specific medication over other therapies should be confirmed by findings originating from well-designed RCTs.</p>","PeriodicalId":94007,"journal":{"name":"Expert review of respiratory medicine","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2023-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139693720","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The ageing of Cystic Fibrosis patients with new modulators: current gaps and challenges. 囊性纤维化患者的老龄化与新调节剂:当前的差距与挑战。
Pub Date : 2023-12-01 Epub Date: 2024-02-12 DOI: 10.1080/17476348.2024.2311109
Almudena Felipe Montiel, Antonio Álvarez Fernández, Letizia Traversi, Eva Polverino
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引用次数: 0
Demystification of artificial intelligence for respiratory clinicians managing patients with obstructive lung diseases. 为管理阻塞性肺病患者的呼吸科临床医生揭开人工智能的神秘面纱。
Pub Date : 2023-12-01 Epub Date: 2024-01-25 DOI: 10.1080/17476348.2024.2302940
Joana Antão, Jeroen de Mast, Alda Marques, Frits M E Franssen, Martijn A Spruit, Qichen Deng

Introduction: Asthma and chronic obstructive pulmonary disease (COPD) are leading causes of morbidity and mortality worldwide. Despite all available diagnostics and treatments, these conditions pose a significant individual, economic and social burden. Artificial intelligence (AI) promises to support clinical decision-making processes by optimizing diagnosis and treatment strategies of these heterogeneous and complex chronic respiratory diseases. Its capabilities extend to predicting exacerbation risk, disease progression and mortality, providing healthcare professionals with valuable insights for more effective care. Nevertheless, the knowledge gap between respiratory clinicians and data scientists remains a major constraint for wide application of AI and may hinder future progress. This narrative review aims to bridge this gap and encourage AI deployment by explaining its methodology and added value in asthma and COPD diagnosis and treatment.

Areas covered: This review offers an overview of the fundamental concepts of AI and machine learning, outlines the key steps in building a model, provides examples of their applicability in asthma and COPD care, and discusses barriers to their implementation.

Expert opinion: Machine learning can advance our understanding of asthma and COPD, enabling personalized therapy and better outcomes. Further research and validation are needed to ensure the development of clinically meaningful and generalizable models.

导言:哮喘和慢性阻塞性肺病(COPD)是全球发病和死亡的主要原因。尽管有各种可用的诊断和治疗方法,但这些疾病仍给个人、经济和社会带来沉重负担。人工智能(AI)有望通过优化这些异质性复杂慢性呼吸系统疾病的诊断和治疗策略,为临床决策过程提供支持。人工智能的功能还可扩展到预测病情恶化风险、疾病进展和死亡率,为医疗保健专业人员提供有价值的见解,以实现更有效的护理。然而,呼吸科临床医生和数据科学家之间的知识差距仍然是人工智能广泛应用的主要制约因素,并可能阻碍未来的发展。本综述旨在弥合这一差距,通过解释人工智能在哮喘和慢性阻塞性肺疾病诊断和治疗中的方法和附加值,鼓励人工智能的应用:本综述概述了人工智能和机器学习的基本概念,概述了建立模型的关键步骤,举例说明了其在哮喘和慢性阻塞性肺病护理中的适用性,并讨论了其实施障碍:机器学习可以促进我们对哮喘和慢性阻塞性肺病的了解,实现个性化治疗和更好的疗效。需要进一步研究和验证,以确保开发出具有临床意义且可推广的模型。
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引用次数: 0
A three-gene random forest model for diagnosing idiopathic pulmonary fibrosis based on circadian rhythm-related genes in lung tissue. 基于肺组织中昼夜节律相关基因诊断特发性肺纤维化的三基因随机森林模型。
Pub Date : 2023-12-01 Epub Date: 2024-01-31 DOI: 10.1080/17476348.2024.2311262
Jie He, Jun Hu, Hairong Liu

Background: The disorder of circadian rhythm could be a key factor mediating fibrotic lung disease Therefore, our study aims to determine the diagnostic value of circadian rhythm-related genes (CRRGs) in IPF.

Methods: We retrieved the data on CRRGs from previous studies and the GSE150910 dataset. The participants from the GSE150910 dataset were divided into training and internal validation sets. Next, we used several various bioinformatics methods and machine learning algorithms to screen genes. Next, we identified SEMA5A, COL7A1, and TUBB3, which were included in the random forest (RF) diagnostic model. Finally, external validation was conducted on data retrieved from the GSE184316 datasets.

Results: The results revealed that the RF diagnostic model could diagnose patients with IPF in the internal validation set with the area under the ROC curve (AUC) value of 0.905 and in the external validation with the AUC value of 0.767. Furthermore, real-time quantitative PCR and western blotting results revealed a significant decrease in SEMA5A (p < 0.05) expression level and an increase in COL7A1 and TUBB3 expression levels in TGF-β1-treated normal human lung fibroblasts.

Conclusion: We constructed an RF diagnostic model based on SEMA5A, COL7A1, and TUBB3 expression in lung tissue for diagnosing patients with IPF.

背景:昼夜节律紊乱可能是导致肺纤维化疾病的关键因素:因此,我们的研究旨在确定昼夜节律相关基因(CRRGs)在 IPF 中的诊断价值:我们从以往的研究和 GSE150910 数据集中检索了有关 CRRGs 的数据。我们将 GSE150910 数据集中的参与者分为训练集和内部验证集。接下来,我们使用了多种生物信息学方法和机器学习算法来筛选基因。接着,我们确定了 SEMA5A、COL7A1 和 TUBB3,并将其纳入随机森林(RF)诊断模型。最后,我们对从 GSE184316 数据集中获取的数据进行了外部验证:结果表明,RF 诊断模型在内部验证集中可诊断出 IPF 患者,其 ROC 曲线下面积(AUC)值为 0.905,在外部验证中的 AUC 值为 0.767。此外,实时定量 PCR 和 Western 印迹检测结果显示,SEMA5A 的含量显著下降(p 结论:SEMA5A 的检测结果显示,IFF 的发病率明显增加:我们根据肺组织中 SEMA5A、COL7A1 和 TUBB3 的表达构建了一个射频诊断模型,用于诊断 IPF 患者。
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引用次数: 0
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Expert review of respiratory medicine
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