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Performance evaluation of a Cadre Forensics TopMatch-GS 3D system for cartridge case comparisons. 用于弹壳比较的Cadre Forensics TopMatch-GS 3D系统的性能评估。
Pub Date : 2024-12-12 DOI: 10.1111/1556-4029.15688
Joseph W Alsdurf, Eric F Law, Stephanie C Luehr

Three-dimensional (3D) measurement systems for firearm forensics are becoming more prevalent in forensic laboratories, and these instruments are typically coupled with algorithms to assist firearm examiners with comparisons. Due to differences in firearm feature reproducibility on different types of ammunition, comparison algorithms need to be tested utilizing a variety of ammunition brands. For this study, 30 shots were fired, utilizing six common ammunition brands, from each of the 10 casework firearms for a total of 300 cartridge cases. All cartridge cases were scanned on a Cadre Forensics TopMatch-GS 3D desktop system and compared using Cadre's breech face and firing pin aperture shear algorithms for a total of 44,850 comparisons. Receiver operating characteristic (ROC) curves and the area under the curve (AUC) were used to quantify the performance of the algorithms when comparing within and between ammunition brands. Same ammunition brand comparisons (AUC = 0.964) performed statistically significantly better (p = 0.0075) than different ammunition brand comparisons (AUC = 0.944). Overall, the results generally indicated greater reproducibility of characteristics from a firearm when the ammunition in a comparison is the same, however, Cadre's algorithms demonstrated excellent overall discrimination between same and different-source comparisons regardless of ammunition brand (AUC = 0.946). Additionally, score thresholds were evaluated for easier interpretation of what algorithm results mean for practitioners, where 68.6% of same-source comparisons resulted in a similarity score greater than 0.5. These results should assist the field in moving toward the use of algorithms to assist examiners in casework comparisons.

用于枪支取证的三维(3D)测量系统在法医实验室越来越普遍,这些仪器通常与算法相结合,以协助枪支检验人员进行比较。由于不同类型弹药的枪支特征再现性存在差异,因此需要使用各种品牌的弹药对比较算法进行测试。在这项研究中,使用六种常见的弹药品牌,分别从 10 支个案枪支中发射了 30 发子弹,共计 300 个弹壳。所有弹壳均在 Cadre Forensics TopMatch-GS 3D 桌面系统上扫描,并使用 Cadre 的后端面和撞针孔剪切算法进行比较,共进行了 44,850 次比较。接收器操作特征曲线(ROC)和曲线下面积(AUC)用于量化弹药品牌内和品牌间比较算法的性能。相同弹药品牌比较(AUC = 0.964)在统计学上明显优于不同弹药品牌比较(AUC = 0.944)(p = 0.0075)。总体而言,结果普遍表明,当比较中的弹药相同时,枪支特征的再现性更高,但是,无论弹药品牌如何,Cadre 算法在相同来源和不同来源比较之间都表现出极佳的总体区分度(AUC = 0.946)。此外,还对得分阈值进行了评估,以便于从业人员解释算法结果的含义,68.6% 的同源比较结果的相似性得分大于 0.5。这些结果应有助于该领域逐步使用算法来协助检验人员进行案件工作比较。
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引用次数: 0
Fishing for the missing: The application of recreational fish finders for underwater body detection in shallow waters. 寻人捕鱼:休闲寻鱼器在浅水区水下尸体探测中的应用。
Pub Date : 2024-12-11 DOI: 10.1111/1556-4029.15685
Britny A Martlin, Lynne S Bell

Early detection of submerged bodies is essential to increase the possibility of recovery. Different water bodies present different challenges, particularly rivers and the ocean, where chances of detection are vastly reduced. Modern recreational fish finders incorporate multiple sonar technologies, including Sidescan sonar, at high-frequency resolutions, similar to commercial units. Recreational units are widely available and usually hull-mounted, allowing them to be utilized on almost any vessel in shallow and difficult to navigate environments. Recreational fish finders are currently an untapped resource which may assist search teams with the early detection and recovery of human remains submerged in shallow water (<20 m). This research investigated the efficacy of a modern recreational fish finder attached to a kayak to detect human proxies and living human volunteers submerged at shallow depths in (1) two indoor freshwater environments and (2) two outdoor environments (a freshwater lake and a nearshore coastal environment). Results demonstrated that recreational fish finders can detect human bodies submerged in both fresh and saltwater contexts at shallow depths within the water column and on the water bottom. Recreational units equipped with Sidescan sonar (800 kHz) provided the necessary resolution for underwater body detection at shallow depths. These sophisticated sensors are currently used by recreational boaters and anglers, and offer the opportunity to increase the eyes in the water not just by search and recovery teams, but by the public itself.

尽早发现被淹没的尸体对于增加恢复的可能性至关重要。不同的水体面临不同的挑战,特别是河流和海洋,在那里被发现的机会大大降低。现代休闲寻鱼器采用多种声纳技术,包括侧扫描声纳,在高频分辨率,类似于商业单位。娱乐单元广泛使用,通常安装在船体上,允许它们在几乎任何船只上使用,在浅水和难以导航的环境中。游憩式寻鱼器是目前尚未开发的资源,可协助搜救队及早发现和打捞被淹没在浅水中的遗体(
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引用次数: 0
Preliminary validation of Amped FIVE software for subject height estimation. ampedfive软件用于受试者高度估计的初步验证。
Pub Date : 2024-12-10 DOI: 10.1111/1556-4029.15674
Reem Ibrahim, Eugene Liscio

Single view metrology poses a persistent challenge in extracting accurate quantitative information from individual images or video frames within the realm of forensic video analysis. Methods such as reverse projection, projective geometry, and photogrammetry have been used in the past with success but require validation and understanding of the limitations of each method. This study aims to conduct a preliminary validation of the subject height estimation feature in Amped FIVE software, which relies on the principles of single view metrology. A group of 14 individuals assumed an upright posture at distances of 2.4 m, 5.4 m, and 10 m away from two security cameras with different resolutions 4k (3840 × 2160) and HD (1920 × 1080). Prior to recording, participants' heights were measured but were not provided to the researcher in this study until after the analysis was completed. A height scale with clearly marked black and white graduations was used as a control. Height estimations were subsequently obtained using the Measure 3D tool in Amped FIVE software. On average, the overall error was found to be approximately ± 1.3 cm with a standard deviation of 0.9 cm. This study shows that Amped FIVE can provide accurate height estimates in a controlled environment. Future work should be done to test more difficult scenarios in less-than-ideal conditions.

单视图计量提出了一个持续的挑战,从个别图像或视频帧提取准确的定量信息在法医视频分析领域。反投影、射影几何和摄影测量等方法在过去已被成功使用,但需要验证和了解每种方法的局限性。本研究旨在对基于单视图测量原理的ampedfive软件中的被测物高度估计特性进行初步验证。一组14人分别站在2.4米、5.4米和10米的距离处,分别站在两个分辨率分别为4k (3840 × 2160)和高清(1920 × 1080)的摄像头前。在记录之前,测量了参与者的身高,但直到分析完成后才提供给研究人员。使用带有清晰黑白刻度的高度刻度作为对照。随后使用ampedfive软件中的Measure 3D工具获得高度估计。平均而言,总体误差约为±1.3 cm,标准差为0.9 cm。这项研究表明,在受控环境下,ampedfive可以提供准确的高度估计。未来的工作应该在不太理想的条件下测试更困难的场景。
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引用次数: 0
Cross entropy and log likelihood ratio cost as performance measures for multi-conclusion categorical outcomes scales. 交叉熵和对数似然比成本作为多结论分类结果量表的性能度量。
Pub Date : 2024-12-10 DOI: 10.1111/1556-4029.15686
Eric M Warren, John C Handley, H David Sheets

The inconclusive category in forensics reporting is the appropriate response in many cases, but it poses challenges in estimating an "error rate". We discuss the use of a class of information-theoretic measures related to cross entropy as an alternative set of metrics that allows for performance evaluation of results presented using multi-category reporting scales. This paper shows how this class of performance metrics, and in particular the log likelihood ratio cost, which is already in use with likelihood ratio forensic reporting methods and in machine learning communities, can be readily adapted for use with the widely used multiple category conclusions scales. Bayesian credible intervals on these metrics can be estimated using numerical methods. The application of these metrics to published test results is shown. It is demonstrated, using these test results, that reducing the number of categories used in a proficiency test from five or six to three increases the cross entropy, indicating that the higher number of categories was justified, as it they increased the level of agreement with ground truth.

法医报告中的不确定类别在许多情况下是适当的反应,但它在估计“错误率”方面提出了挑战。我们讨论了与交叉熵相关的一类信息论度量的使用,作为一组替代度量,允许使用多类别报告量表对结果进行性能评估。本文展示了这类性能指标,特别是对数似然比成本,它已经在似然比取证报告方法和机器学习社区中使用,可以很容易地适应于广泛使用的多类别结论量表。这些指标上的贝叶斯可信区间可用数值方法估计。展示了这些度量对已发布的测试结果的应用。使用这些测试结果证明,将熟练程度测试中使用的类别数量从五个或六个减少到三个会增加交叉熵,这表明类别数量越多是合理的,因为它们增加了与基本真理的一致程度。
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引用次数: 0
Twenty-eight days later: The recovery of DNA from human remains submerged in aggressive household chemicals. 28天后:从浸泡在腐蚀性家用化学品中的人类遗体中提取DNA。
Pub Date : 2024-12-10 DOI: 10.1111/1556-4029.15682
Jennifer Snedeker, Rachel Houston, Sheree Hughes

Aggressive chemicals intended for cleaning pools or unclogging drains contain high concentrations of dangerous compounds, leading to their nefarious use in dissolving human remains in some criminal cases. The use of these readily accessible household cleaners to destroy human remains and hide evidence of a crime presents a considerable challenge for human identification. However, research on the success of recovering DNA from such remains is limited. Therefore, we investigated the effects of submerging partial human remains (including whole heads, forearms, and hands) in five different household products: bleach, Rid-X® septic treatment, lye drain opener, sulfuric acid drain opener, and muriatic acid (hydrochloric acid) pool cleaner. We evaluated the impact of each chemical, focusing on visual changes, DNA recovery, and the potential for successful human identification through traditional STR or mitochondrial DNA analyses. Exposure to all chemicals altered the appearance of the remains, but DNA recovery was still possible across various time periods, up to 28 days. Human remains exposed to bleach, Rid-X®, and lye produced full STR profiles after 4 weeks. Sulfuric acid shortened this time to 3 weeks, while hydrochloric acid, the most damaging chemical, limited full STR profile recovery to just the first 3 days of exposure. This study demonstrates that although differences in the rate of damage occur depending on the amount of tissue introduced, volume of chemical used, and the specific chemical of choice, DNA-based human identification of remains treated with everyday household cleaners is likely, particularly if bone fragments are recovered.

用于清洁水池或疏通下水道的腐蚀性化学品含有高浓度的危险化合物,导致它们在一些刑事案件中被邪恶地用于溶解人体遗骸。使用这些随手可得的家用清洁剂来销毁人类遗骸和隐藏犯罪证据,对人类身份鉴定提出了相当大的挑战。然而,从这些遗骸中成功提取DNA的研究是有限的。因此,我们研究了将部分人体遗骸(包括整个头部、前臂和手)浸泡在五种不同的家用产品中的效果:漂白剂、Rid-X®化脓剂、碱液排水器、硫酸排水器和盐酸(盐酸)泳池清洁剂。我们评估了每种化学物质的影响,重点关注视觉变化、DNA恢复以及通过传统STR或线粒体DNA分析成功进行人类鉴定的潜力。暴露在所有化学物质中都会改变遗体的外观,但DNA在不同的时间段内仍然可以恢复,最长可达28天。人类遗骸暴露于漂白剂,Rid-X®和碱液4周后产生完整的STR谱。硫酸将这一时间缩短至3周,而最具破坏性的化学物质盐酸将整个STR剖面的恢复限制在暴露后的前3天。这项研究表明,尽管损伤率的不同取决于引入的组织数量、使用的化学物质的体积和所选择的特定化学物质,但用日常家用清洁剂处理过的遗骸的dna人类鉴定是可能的,特别是如果骨头碎片被恢复的话。
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引用次数: 0
Prevalence of new psychoactive substances and drugs of abuse in the hair of individuals diagnosed with substance use disorder: Polydrug and emerging pattern of consumption. 新精神活性物质和药物滥用在被诊断为物质使用障碍的个体的头发中的流行:多种药物和新出现的消费模式。
Pub Date : 2024-12-10 DOI: 10.1111/1556-4029.15683
Arianna Giorgetti, Susan Mohamed, Filippo Pirani, Rossella Barone, Marialuisa Grech, Paolo Fais, Jennifer Paola Pascali, Guido Pelletti

People diagnosed with substance use disorder (SUD) might represent a high-risk subpopulation for New Psychoactive Drugs (NPS) consumption, and hair analysis offers a unique perspective to assess drug prevalence in this population. The present study aims to assess the prevalence of NPS and their co-consumption with traditional drugs of abuse (DoA) in individuals diagnosed with SUD. Hair samples from patients under care at the addiction treatment service of Bologna, Italy, for a diagnosed SUD, were collected during 2023 and analyzed by ultra-high-performance liquid chromatography-mass spectrometry (UHPLC-MS/MS), using a previously validated method. Among the 88 patients included, 95.5% tested positive for at least one substance, of which 88.1% for traditional DoA only, and 11.9% for NPS in addition to DoA. Among the positive samples, patients were found positive for more than two drugs in 67.9% of cases. The combination of DoA and NPS was more frequent in the younger age group (<21-30 years old, compared to 31-70, p = 0.025). Ketamine was detected in 8.0% of all samples, with mean hair levels 49.68 pg/mg (ranging 8.55-81.90 pg/mg) and was frequently accompanied by cocaine (85.7% of cases). Fentanyl was detected in 3.4% of all samples, while, among NPS, buphedrone was the only one detected. Our retrospective study highlights that the consumption of NPS is relatively low compared to other vulnerable or high-risk populations. However, the prevalence of polydrug consumption and the high rate of ketamine-cocaine combination warrant careful monitoring even in this population.

被诊断为物质使用障碍(SUD)的人可能是新型精神活性药物(NPS)消费的高风险亚人群,头发分析为评估这一人群的药物流行情况提供了一个独特的视角。本研究旨在评估NPS在诊断为SUD的个体中的患病率及其与传统药物滥用(DoA)的共同消费。研究人员于2023年在意大利博洛尼亚的成瘾治疗服务中心收集了诊断为SUD的患者的头发样本,并使用先前验证的方法,通过超高效液相色谱-质谱(UHPLC-MS/MS)进行了分析。在纳入的88例患者中,95.5%的患者至少有一种物质检测呈阳性,其中88.1%仅为传统DoA, 11.9%为NPS + DoA。阳性样本中,两种以上药物阳性的占67.9%。DoA和NPS合并在年轻年龄组中更为常见(
{"title":"Prevalence of new psychoactive substances and drugs of abuse in the hair of individuals diagnosed with substance use disorder: Polydrug and emerging pattern of consumption.","authors":"Arianna Giorgetti, Susan Mohamed, Filippo Pirani, Rossella Barone, Marialuisa Grech, Paolo Fais, Jennifer Paola Pascali, Guido Pelletti","doi":"10.1111/1556-4029.15683","DOIUrl":"https://doi.org/10.1111/1556-4029.15683","url":null,"abstract":"<p><p>People diagnosed with substance use disorder (SUD) might represent a high-risk subpopulation for New Psychoactive Drugs (NPS) consumption, and hair analysis offers a unique perspective to assess drug prevalence in this population. The present study aims to assess the prevalence of NPS and their co-consumption with traditional drugs of abuse (DoA) in individuals diagnosed with SUD. Hair samples from patients under care at the addiction treatment service of Bologna, Italy, for a diagnosed SUD, were collected during 2023 and analyzed by ultra-high-performance liquid chromatography-mass spectrometry (UHPLC-MS/MS), using a previously validated method. Among the 88 patients included, 95.5% tested positive for at least one substance, of which 88.1% for traditional DoA only, and 11.9% for NPS in addition to DoA. Among the positive samples, patients were found positive for more than two drugs in 67.9% of cases. The combination of DoA and NPS was more frequent in the younger age group (<21-30 years old, compared to 31-70, p = 0.025). Ketamine was detected in 8.0% of all samples, with mean hair levels 49.68 pg/mg (ranging 8.55-81.90 pg/mg) and was frequently accompanied by cocaine (85.7% of cases). Fentanyl was detected in 3.4% of all samples, while, among NPS, buphedrone was the only one detected. Our retrospective study highlights that the consumption of NPS is relatively low compared to other vulnerable or high-risk populations. However, the prevalence of polydrug consumption and the high rate of ketamine-cocaine combination warrant careful monitoring even in this population.</p>","PeriodicalId":94080,"journal":{"name":"Journal of forensic sciences","volume":" ","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-12-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142804223","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Venous aneurysm leading to fatal pulmonary thromboembolism with a history of a remote stab wound of the extremity. 静脉动脉瘤导致致命的肺血栓栓塞与历史远端刺伤的四肢。
Pub Date : 2024-12-06 DOI: 10.1111/1556-4029.15687
Emily Helmrich, Erin Risotto-Urbanowicz, Pierce Massie, Ross Clark

Venous aneurysms are rare, and their incidence is unknown. External iliac vein aneurysms are even more rare with only 50 case reports published from 1950 to 2018. We present a case of an individual who died suddenly from a pulmonary thromboembolic event due to an external iliac vein aneurysm formed by a remote penetrating injury. A 32-year-old male was in Immigration and Customs Enforcement (ICE) custody when he died suddenly. It was discovered during his autopsy that he had an occlusive pulmonary thromboembolism (PE) within the left main pulmonary artery and distal branches of the right pulmonary artery. On additional investigation and postmortem computed tomography, a large saccular aneurysm arising from the external iliac vein was discovered. This aneurysm contained clotted blood, and was determined to be the cause of his PE and subsequent death. Although rarely a source for a fatal PE, venous aneurysms should be considered as a possible source for thromboembolism; their presence may alter the manner of death, given their underlying etiology. This is especially true for young adults with a remote history of trauma near a major venous tributary, as traumatic arteriovenous fistula is a common cause of secondary venous aneurysm. For this case, the manner of death was classified as homicide.

静脉动脉瘤是罕见的,其发病率是未知的。髂外静脉动脉瘤更为罕见,从1950年到2018年仅发表了50例病例报告。我们提出了一个病例的个人谁突然死于肺血栓栓塞事件由于远端穿透性损伤形成的髂外静脉动脉瘤。一名32岁的男性在移民和海关执法局(ICE)拘留期间突然死亡。在他的尸检中发现他在左肺动脉主干和右肺动脉远端分支有闭塞性肺血栓栓塞(PE)。在进一步的调查和死后的计算机断层扫描中,发现了一个起源于髂外静脉的大囊状动脉瘤。这个动脉瘤含有凝血,并被确定为他肺动脉栓塞和随后死亡的原因。尽管静脉动脉瘤很少是致死性PE的来源,但应将其视为血栓栓塞的可能来源;鉴于其潜在的病因,它们的存在可能会改变死亡的方式。对于在主要静脉支流附近有长期创伤史的年轻人尤其如此,因为外伤性动静脉瘘是继发性静脉动脉瘤的常见原因。在这个案件中,死亡方式被归类为他杀。
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引用次数: 0
Generative-adversarial network for falsification of handwritten signatures. 生成对抗网络伪造手写签名。
Pub Date : 2024-12-04 DOI: 10.1111/1556-4029.15680
Maciej Marcinowski-Prażmowski

With further development of generative AI, primarily generative-adversarial networks (GAN), deepfakes are gaining in quality and accessibility. While, forensic methods designed for examination of handwriting are often applied to its digital copies, despite being possibly insensitive to cases of GAN-made forgeries (unless methods of digital forensics are co-employed). Approaching this problem from a novel perspective, we have created a translational GAN tasked with generating false handwritten signatures from limited examples, aiming to ascertain whether traditional methods of signature examination will be effective against such forgeries. We have found that traditional methods of handwriting examination are sufficient for identification of discriminative features that could result in rejection of GAN-made forgeries, however, those stemmed mostly from the lesser visual quality of the generated signatures, which could be improved in the future.

随着生成式人工智能(主要是生成对抗网络(GAN))的进一步发展,深度伪造的质量和可访问性正在提高。然而,为检查笔迹而设计的法医方法经常应用于其数字副本,尽管可能对gan制造的伪造案件不敏感(除非联合使用数字法医方法)。从一个新颖的角度来解决这个问题,我们创建了一个翻译GAN,其任务是从有限的例子中生成虚假的手写签名,旨在确定传统的签名检查方法是否能有效地对抗此类伪造。我们发现,传统的笔迹检查方法足以识别鉴别特征,这些特征可能导致gan制造的伪造品被拒绝,然而,这些特征主要源于生成的签名的视觉质量较差,这可以在未来得到改善。
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引用次数: 0
Report of forensically relevant insects collected from pig and rabbit remains during two forensic entomology workshops in Eastern Massachusetts. 在马萨诸塞州东部两次法医昆虫学研讨会期间从猪和兔子遗骸中采集的法医相关昆虫报告。
Pub Date : 2024-12-04 DOI: 10.1111/1556-4029.15681
Samantha J Sawyer

Forensic entomology relies on known geographic ranges and seasonal presence of forensically relevant insects. In the Northeastern United States, there is no information on species in the region in early spring. Two forensic entomology workshops took place in April of 2023 and 2024 in Milton, Massachusetts. During this workshop, practitioners were trained in the appropriate collection and storage techniques prior to a practical experience including the collection of insects from pig and rabbit remains. All insects collected were identified down to family or species level. Across both years, Phormia regina (Meigen) (Diptera: Calliphoridae) was the fly consistently colonizing remains and was the oldest immature larvae in all instances. Calliphora vicina (Robineau-Desvoidy) (Diptera: Calliphoridae), Protophormia terraenovae (Robineau-Desvoidy) (Diptera: Calliphoridae), and Muscina stabulans (Fallén) (Diptera: Muscidae) were additional flies co-colonizing remains with P. regina. Other species were found as adults surrounding the remains that included other necrophagous fly species, beetles, and ants. Variation in insects collected between years likely due to high temperature variation. This documentation of species provides context to forensically related flies expected in Eastern Massachusetts and provides research directives in the region.

法医昆虫学依赖于已知的地理范围和法医相关昆虫的季节性存在。在美国东北部,没有关于该地区早春物种的信息。两场法医昆虫学研讨会分别于2023年和2024年4月在马萨诸塞州的米尔顿举行。在这个研讨会上,从业者在实践经验之前接受了适当的收集和储存技术的培训,包括从猪和兔子遗体中收集昆虫。收集到的所有昆虫都被鉴定到科或种的水平。在这两年中,在所有情况下,都是最老的未成熟幼虫。此外,还发现了与雷吉蝇共定居的残蝇,分别为:维吉蝇(robineau - desvoidae)(双翅目:蝇科)、地原蝇(robineau - desvoidae)(双翅目:蝇科)和马田蝇(fallabulans)(双翅目:蝇科)。在遗骸周围还发现了其他成年物种,包括其他食尸蝇、甲虫和蚂蚁。不同年份收集的昆虫的变化可能是由于高温变化。这种物种的文件提供了背景法医相关苍蝇预计在马萨诸塞州东部,并提供了在该地区的研究指导。
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引用次数: 0
Comparative transcriptomic analysis provides novel insights into mescaline biosynthesis by Lophophora williamsii. 比较转录组学分析为了解威廉希尔手机版的麦司卡林生物合成提供了新的视角。
Pub Date : 2024-11-26 DOI: 10.1111/1556-4029.15679
Eun-Mi Hwang, Kyu-Sik Jeong, Seong Yeon Yoo, Jihyun Kim, Sanggil Choe, Joo-Young Kim

Lophophora williamsii, known for mescaline synthesis, has raised legal and ethical considerations. However, L. williamsii specimens that do not contain mescaline have been recently identified, necessitating the development of techniques to differentiate between mescaline-positive and mescaline-negative groups. Genetic markers have been explored to differentiate these specimens, complementing gas chromatography/mass spectrometry analysis. Here, we used a single-molecule real-time polymerase chain reaction to generate a full-length L. williamsii transcriptome and elucidate the mechanisms underlying mescaline biosynthesis. In total, 2,839,819 base pairs of highly accurate long reads were obtained using PacBio Iso-Seq and 70,945 unigenes were obtained through transcriptome sequencing. Known genes involved in the mescaline biosynthetic pathway were confirmed in the L. williamsii transcriptome, including 6 genes encoding tyrosine decarboxylases, 1 encoding tyrosine/DOPA decarboxylase, 215 encoding O-methyltransferases, and 129 encoding hydroxylases. Gene Ontology analysis revealed 2903 biological processes, 695 cellular components, and 1766 molecular functions. The Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed two biosynthetic pathways, namely, phenylpropanoid and isoquinoline biosynthesis, associated with mescaline biosynthesis. To investigate genetic differences based on the presence of mescaline, Illumina Nova sequencing was conducted. The expression levels of genes involved in mescaline biosynthesis were compared to establish a candidate gene pool based on the presence of mescaline. Subsequently, functional annotation was performed on the identified candidate genes using a genetic database derived from PacBio sequencing. These findings underscore the need for a re-evaluation of forensic methods and legal regulations concerning newly identified L. williamsii specimens.

Lophophora williamsii 以合成麦司卡林而闻名,这引起了法律和伦理方面的考虑。不过,最近发现了不含麦司卡林的 L. williamsii 标本,因此有必要开发区分麦司卡林阳性和麦司卡林阴性群体的技术。基因标记被用来区分这些标本,作为气相色谱/质谱分析的补充。在这里,我们使用单分子实时聚合酶链反应生成了全长的 L. williamsii 转录组,并阐明了麦司卡林生物合成的内在机制。我们使用 PacBio Iso-Seq 获得了 2,839,819 个碱基对的高精度长读数,并通过转录组测序获得了 70,945 个单基因。在 L. williamsii 的转录组中确认了参与麦司卡林生物合成途径的已知基因,包括 6 个编码酪氨酸脱羧酶的基因、1 个编码酪氨酸/多巴胺脱羧酶的基因、215 个编码 O-甲基转移酶的基因和 129 个编码羟化酶的基因。基因本体分析显示了 2903 个生物过程、695 个细胞组分和 1766 个分子功能。京都基因和基因组百科全书(KEGG)通路分析显示,与麦司卡林生物合成相关的生物合成通路有两条,即苯丙类化合物和异喹啉的生物合成。为了研究麦司卡林存在的遗传差异,进行了 Illumina Nova 测序。通过比较参与麦司卡林生物合成的基因的表达水平,根据麦司卡林的存在情况建立了候选基因库。随后,利用 PacBio 测序得到的基因数据库对确定的候选基因进行了功能注释。这些发现突出表明,有必要重新评估有关新鉴定的 L. williamsii 标本的法医方法和法律规定。
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引用次数: 0
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Journal of forensic sciences
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