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Negotiating cohabitation in a Nigerian abattoir: One Health perspectives of human-animal-ecosystem interactions examined in the light of the SARS-CoV-2 pandemic. 尼日利亚屠宰场的同居谈判:从SARS-CoV-2大流行的角度审视人-动物-生态系统相互作用的一个健康视角
IF 3.8 Q2 INFECTIOUS DISEASES Pub Date : 2025-07-16 DOI: 10.1186/s42522-025-00161-9
Hellena Debelts, Valerie Allendorf, Olayinka Asala, Ebere Roseann Agusi, Ismaila Shittu, Oluyemi Ogunmolawa, Judith Bakam, Bitrus Inuwa, Jeremiah Ijomanta, Joshua Seyi Oyetunde, Chinonyerem Chinyere, Austine Elah, David Oludare Omoniwa, Klaas Dietze, Adeponle Adeoye, Chinwe Lucia Ochu, Anja Globig, Almudena Mari-Saez, Clement Meseko

Background: Urbanization and intensifying interactions between humans, animals, and the environment present complex challenges for One Health, particularly in regions like Central Nigeria. This study investigates the dynamics of human-animal-environment interfaces within a Nigerian abattoir during the ongoing SARS-CoV-2 pandemic, focusing on zoonotic transmission pathways and multispecies interactions.

Methods: We employed a mixed-methods approach, combining ethnographic observations, semi-structured interviews, and biological sampling of livestock, dogs, and small mammals. Virological analyses included RT-qPCR for SARS-CoV-2 RNA detection and ELISA for antibody identification. Fieldwork spanned rainy and dry seasons in 2022 to capture seasonal variations in human-animal interactions.

Results: The abattoir compound is centre of life of multiple species, involving humans, livestock, synanthropic mammals, and domestic animals, and as such, serves as a dynamic hub for their interactions. Seasonal changes influence interaction intensity, with higher densities during the rainy season. While SARS-CoV-2 RNA was not detected in animal samples, antibodies were identified in cattle, goats, sheep, dogs, and shrews, with higher occurrence in the rainy season. These findings suggest prior exposure of the animals to SARS-CoV-2, underscoring the influence of environmental and human behavioural factors on zoonotic transmission risks.

Conclusions: This One Health study demonstrates the value of integrating ethnographic insights with serological data, and highlights the abattoir compound as a critical site for zoonotic pathogen circulation. Findings emphasize the need for targeted interdisciplinary surveillance and mitigation strategies in high-density, multispecies environments to address zoonotic disease risks and enhance health resilience across species.

背景:城市化以及人类、动物和环境之间日益加剧的相互作用给“同一健康”带来了复杂的挑战,特别是在尼日利亚中部等地区。本研究调查了正在进行的SARS-CoV-2大流行期间尼日利亚屠宰场内人-动物-环境界面的动态,重点关注人畜共患传播途径和多物种相互作用。方法:我们采用混合方法,结合民族志观察、半结构化访谈和牲畜、狗和小型哺乳动物的生物抽样。病毒学分析包括RT-qPCR检测SARS-CoV-2 RNA和ELISA检测抗体。实地调查跨越了2022年的雨季和旱季,以捕捉人与动物相互作用的季节性变化。结果:屠宰场建筑群是人类、牲畜、哺乳动物和家畜等多种生物的生活中心,是相互作用的动态枢纽。季节变化影响相互作用强度,雨季密度较高。虽然在动物样本中未检测到SARS-CoV-2 RNA,但在牛、山羊、绵羊、狗和鼩鼱中发现了抗体,在雨季发病率较高。这些发现表明动物先前暴露于SARS-CoV-2,强调了环境和人类行为因素对人畜共患传播风险的影响。结论:这项One Health研究证明了将人种学见解与血清学数据相结合的价值,并强调了屠宰场是人畜共患病原体传播的关键场所。研究结果强调,在高密度、多物种环境中需要有针对性的跨学科监测和缓解策略,以解决人畜共患病风险并增强物种间的健康恢复力。
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引用次数: 0
Cultural and behavioral drivers of zoonotic disease transmission and persistence among diverse pastoralist communities in East Africa. 东非不同牧民社区人畜共患疾病传播和持续的文化和行为驱动因素。
IF 3.8 Q2 INFECTIOUS DISEASES Pub Date : 2025-07-14 DOI: 10.1186/s42522-025-00153-9
Dismas C O Oketch, Ruth Njoroge, Tonny O Ngage, Asha Abdikadir Omar, Abdulai Magarre, Raphael Pasha, John Gachohi, Samuel Waiguru Muriuki, Samoel Ashimosi Khamadi, Ali Duba Boru, Boku Bodha, Lydia Kilowua, Nazaria Wanja Nyaga, Humphrey Kariuki Njaanake, Eunice Kamaara, Walter Jaoko, M Kariuki Njenga, Eric Osoro, Dalmas Omia

Background: Zoonotic diseases such as brucellosis, Rift Valley fever, anthrax, rabies and bovine tuberculosis are highly prevalent among pastoralist communities in low-and middle-income countries.

Methods: This study adopts a One Health approach, employing a range of participatory methods including informal observations, "go-along interviews," narrative-, and key informant- interviews, to explore the cultural, behavioral, and structural drivers of zoonotic disease transmission among pastoralist communities in East Africa. We unpack how the physical environment, socio-economic systems, health systems, community influence and cultural competence as well as individual pastoralists' unique characteristics, behaviors and lifestyles can be leveraged for effective public health interventions that reduce zoonotic risks and improve health outcomes for both humans and livestock.

Results: We present data from 214 purposively selected participants, including 19 key informants, 68 in-depth interviews, 20 focus group discussions, and 22 direct ethnographic observations. Traditional knowledge and beliefs, risky cultural dietary practices such as consumption of raw milk, meat and blood, unprotected parturition assistance, unsafe disposal of carcasses and aborted fetuses were common and carried increased risk of zoonotic transmission. Women and children handled and milked small ruminants while adult men and morans (young warriors) were mostly involved with cattle, camels and slaughtering; hence exposing them to zoonotic pathogens disproportionately. There were piles of manure made up of animal excreta and secretions that were potentially highly contaminated with saprophytes and soil-borne zoonotic pathogens.

Discussion: While livestock play a significant and indispensable role in the daily livelihoods of pastoralist communities, close association of pastoralists with livestock coupled with their unique cultural and behavioral practices increases their risk of exposure to deadly zoonotic diseases. Although, most of these practices are environmentally and culturally adaptive, their risk for transmission is often overlooked. The study also highlights inadequate sanitary practices, poor disposal of animal carcasses and placentae and the absence of veterinary oversight in the production, distribution and consumption of livestock products.

Conclusions: Our study provides a holistic understanding of the subjective perspectives and nuanced insights underlying the emergence and persistence of zoonotic diseases within pastoralist communities. It also underscores the need for culturally sensitive One Health interventions that address these practices and enhance community awareness of zoonotic disease risks and prevention strategies which are often overlooked by conventional epidemiological studies.

背景:布鲁氏菌病、裂谷热、炭疽、狂犬病和牛结核病等人畜共患疾病在低收入和中等收入国家的畜牧社区高度流行。方法:本研究采用“同一个健康”方法,采用一系列参与性方法,包括非正式观察、“随同访谈”、叙述和关键线人访谈,探索东非牧民社区人畜共患疾病传播的文化、行为和结构驱动因素。我们揭示了如何利用自然环境、社会经济系统、卫生系统、社区影响和文化能力以及牧民个人的独特特征、行为和生活方式进行有效的公共卫生干预,从而减少人畜共患病风险,改善人类和牲畜的健康状况。结果:我们提供了214名有目的选择的参与者的数据,包括19名关键线人,68次深度访谈,20次焦点小组讨论和22次直接的民族志观察。传统知识和信仰、危险的文化饮食习惯(如食用生奶、肉和血)、无保护的分娩协助、不安全处理尸体和流产胎儿是常见的,并且增加了人畜共患病传播的风险。妇女和儿童处理和挤奶小反刍动物,而成年男子和morans(年轻的战士)主要参与牛,骆驼和屠杀;因此,他们暴露于人畜共患病原体的比例过高。成堆的粪便由动物排泄物和分泌物组成,可能受到腐生植物和土壤传播的人畜共患病病原体的高度污染。讨论:虽然牲畜在牧民社区的日常生计中发挥着重要和不可或缺的作用,但牧民与牲畜的密切联系,加上其独特的文化和行为习惯,增加了他们接触致命人畜共患疾病的风险。尽管这些做法大多具有环境和文化适应性,但它们的传播风险往往被忽视。该研究还强调了卫生措施不足、动物尸体和胎盘处理不当以及畜产品生产、销售和消费中缺乏兽医监督等问题。结论:我们的研究提供了对畜牧社区人畜共患疾病出现和持续的主观观点和细致入微的见解的整体理解。它还强调需要采取具有文化敏感性的“同一健康”干预措施,处理这些做法,并提高社区对通常被传统流行病学研究忽视的人畜共患疾病风险和预防战略的认识。
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引用次数: 0
Barriers and facilitators of infectious disease outbreak reporting: a One Health scoping review. 传染病暴发报告的障碍和促进因素:同一健康范围审查。
IF 3.8 Q2 INFECTIOUS DISEASES Pub Date : 2025-07-03 DOI: 10.1186/s42522-025-00152-w
Amish Talwar, Md Abu Sayeed, Tambri Housen, Rebecca Katz, Martyn D Kirk

Background: Addressing the barriers to outbreak reporting is critical to prevent future outbreaks from becoming epidemics or pandemics. As most emerging infectious diseases are zoonotic in origin, this requires understanding the barriers affecting both the human and animal health sectors. However, previous reviews of outbreak reporting barriers have only looked at barriers with respect to humans or animals independently. Therefore, we undertook a One Health approach to holistically understand the impact of outbreak reporting barriers across the human health, animal health, and environmental sectors.

Methods: We conducted a scoping review of the peer-reviewed and grey literature to identify barriers and facilitators for outbreak reporting affecting human health, animal health, and the environment. We selected studies that identified discrete barriers or facilitators at the subnational, national, and international levels using quantitative research, qualitative research, mixed methods, or reviews. We extracted information on publication information, barriers, and facilitators, and we thematically summarised our findings.

Results: Among 5,177 records examined, we selected 151 matched parameters for data abstraction and analysis. The most employed methodology was qualitative (56 studies), and the East Asia and Pacific (43 studies) and Sub-Saharan Africa (40 studies) regions were the most studied. Only 45 studies evaluated outbreak reporting with respect to a specific disease. Identified outbreak reporting barriers and facilitators fell under three major themes: technical; economic, political, and bureaucratic; and behavioural and social. We found substantial evidence for technical barriers to outbreak reporting across all regions and sectors and resistance to reporting among agricultural producers. However, evidence for additional barriers, particularly barriers to environmental reporting, is more limited.

Conclusions: This study affirms the importance of building countries' technical capacity to report outbreaks. However, it also indicates the need to sensitize reporters and government officials on the importance of outbreak reporting. A comprehensive understanding of the full breadth of outbreak reporting barriers and facilitators across human health, animal health, and the environment otherwise remains incomplete, with critical implications for ongoing and future outbreaks. Future studies should endeavour to fill these gaps in the evidence base as part of an integrated One Health strategy to improve the outbreak reporting process.

背景:消除疫情报告的障碍对于防止未来的疫情演变为流行病或大流行病至关重要。由于大多数新出现的传染病起源于人畜共患,这需要了解影响人类和动物卫生部门的障碍。然而,以前对疫情报告障碍的审查只单独考察了与人类或动物有关的障碍。因此,我们采用了“同一个健康”方法,以全面了解疫情报告障碍对人类健康、动物健康和环境部门的影响。方法:我们对同行评议文献和灰色文献进行了范围审查,以确定影响人类健康、动物健康和环境的疫情报告的障碍和促进因素。通过定量研究、定性研究、混合方法或综述,我们选择了在次国家、国家和国际层面确定离散障碍或促进因素的研究。我们提取了关于出版信息、障碍和促进因素的信息,并按主题总结了我们的发现。结果:在5177条记录中,我们选择了151条匹配的参数进行数据提取和分析。使用最多的方法是定性的(56项研究),东亚和太平洋(43项研究)和撒哈拉以南非洲(40项研究)区域是研究最多的区域。只有45项研究评估了与特定疾病有关的疫情报告。已确定的爆发报告障碍和促进因素分为三个主要主题:技术;经济、政治和官僚;行为和社会。我们发现了大量证据,表明在所有地区和部门报告疫情存在技术障碍,农业生产者对报告存在抵制。然而,关于其他障碍的证据,特别是环境报告的障碍,则更为有限。结论:这项研究肯定了建设国家报告疫情的技术能力的重要性。然而,这也表明有必要提高记者和政府官员对疫情报告重要性的认识。对人类健康、动物健康和环境中所有暴发报告障碍和促进因素的全面了解仍然不完整,这对正在发生的和未来的暴发具有重大影响。未来的研究应努力填补证据基础中的这些空白,作为改善疫情报告过程的“一个健康”综合战略的一部分。
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引用次数: 0
The São Paulo declaration on One Health: Brazil's path forward to face intersectoral health challenges. 关于同一个健康的<s:1>圣保罗宣言:巴西应对部门间卫生挑战的前进道路。
IF 3.8 Q2 INFECTIOUS DISEASES Pub Date : 2025-07-01 DOI: 10.1186/s42522-025-00157-5
David Soeiro-Barbosa, Liliane A Carneiro, Adolorata A B Carvalho, Alex G da Motta, Ana Julia S Alves, Amy Borges, Carolina C A Pacheco, Elke Stedefeldt, Francisco C Quirino, Francisco Edilson F Lima Júnior, Jane Megid, Jaqueline B Oliveira, João Alves, Juliana A Galhardo, Marcia D Laurenti, Maria Laura C Bicca, Mércia S Frutuoso, Natiela B Oliveira, Rilke N Públio, Rodrigo N Angerami, Taciana F S B Coelho, Vivyanne S Magalhães, Christina Pettan-Brewer, Fernando Nogueira Souza

In 2024, Brazil reached significant milestones in advancing the One Health framework, notably with the establishment of the Interinstitutional Technical Committee for One Health and the launch of the São Paulo Declaration on One Health. These developments mark a crucial step forward in Brazil's strategy to address the interconnected challenges of human, animal, plant, and environmental health. The One Health framework underscores the need for cross-sectoral collaboration, transdisciplinary partnerships, and community-driven engagement, particularly as global issues such as climate change, ecosystem degradation, and health crises become increasingly urgent. The São Paulo Declaration advocates for integrated health surveillance, fostering intersectoral cooperation, and promoting sustainable practices to tackle emerging health threats. It calls for a unified approach to addressing climate change, biodiversity loss, and social vulnerability while prioritizing research, capacity building, and policy integration across all governance levels. This commentary highlights the importance of the São Paulo Declaration in advancing Brazil's One Health strategy and calls for sustained action from academia, governments, and society. These collective efforts are critical to ensuring a resilient and sustainable future, safeguarding the health of humans, animals, and the environment through holistic collaboration.

2024年,巴西在推进“同一个健康”框架方面取得了重大里程碑,特别是成立了“同一个健康机构间技术委员会”,并发表了《关于同一个健康的圣保罗宣言》。这些事态发展标志着巴西应对人类、动物、植物和环境卫生相互关联的挑战的战略向前迈出了关键一步。“同一个健康”框架强调需要跨部门合作、跨学科伙伴关系和社区驱动的参与,特别是在气候变化、生态系统退化和卫生危机等全球问题日益紧迫的情况下。《圣保罗宣言》倡导综合卫生监测,促进部门间合作,促进可持续做法,以应对新出现的卫生威胁。它呼吁采取统一的方法来应对气候变化、生物多样性丧失和社会脆弱性,同时优先考虑所有治理层面的研究、能力建设和政策整合。本评论强调了《圣保罗宣言》在推进巴西“一个健康”战略方面的重要性,并呼吁学术界、政府和社会采取持续行动。这些集体努力对于确保有复原力和可持续的未来,通过全面合作保障人类、动物和环境的健康至关重要。
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引用次数: 0
Developing digital learning to help reduce laboratory inequalities: a viral haemorrhagic fever case study. 发展数字学习以帮助减少实验室不平等现象:病毒性出血热案例研究。
IF 3.8 Q2 INFECTIOUS DISEASES Pub Date : 2025-06-20 DOI: 10.1186/s42522-025-00156-6
Matthew A Knox, Collette Bromhead, Watta Anthony, Varney Kamara, Catherine Wendland, Fleur Connor-Douglas, David T S Hayman

Countries with the highest potential exposure to viral haemorrhagic fever viruses are also those with low expenditure on health services, limiting the capacity for surveillance and detection of these viruses, and effective treatment and outbreak containment. The COVID-19 pandemic further limited travel and in-person collaborative training opportunities for researchers, laboratory and public health professionals. Digital learning offers the prospect of addressing some of the shortfall in training needs. In this short report, we describe our experiences in the development of effective laboratory training tools using digital learning methods. We describe the teaching methodology, list barriers to successful implementation and offer some potential solutions.

病毒性出血热病毒潜在接触率最高的国家也是卫生服务支出低的国家,这限制了监测和发现这些病毒以及有效治疗和遏制疫情的能力。COVID-19大流行进一步限制了研究人员、实验室和公共卫生专业人员的旅行和面对面合作培训机会。数字学习提供了解决培训需求不足的前景。在这个简短的报告中,我们描述了我们在使用数字学习方法开发有效的实验室培训工具方面的经验。我们描述了教学方法,列出了成功实施的障碍,并提供了一些可能的解决方案。
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引用次数: 0
Mosquito-based detection of retroviruses and arboviruses in Senegal: expanding the scope of xenosurveillance. 塞内加尔基于蚊子的逆转录病毒和虫媒病毒检测:扩大异种监测范围。
IF 3.8 Q2 INFECTIOUS DISEASES Pub Date : 2025-06-10 DOI: 10.1186/s42522-025-00155-7
Marie Henriette Dior Ndione, El Hadji Ndiaye, Madeleine Dieng, Babacar Diouf, Safietou Sankhé, Diawo Diallo, Mouhamed Kane, Ndeye Marie Sene, Maimouna Mbanne, Faty Amadou Sy, Seynabou Mbaye Ba Souna Diop, Serge Freddy Moukaha Doukanda, Amadou Alpha Sall, Ousmane Faye, Ndongo Dia, Scott C Weaver, Oumar Faye, Mawlouth Diallo, Gamou Fall, Alioune Gaye, Moussa Moise Diagne

Background: Mosquitoes are well-known vectors for arthropod-borne viruses, yet their role as passive carriers of non-arthropod-borne viruses remains underexplored. Xenosurveillance, a method that utilizes blood-feeding arthropods to sample host and pathogen genetic material, has emerged as a valuable tool in viral ecology. In this study, we investigated the viral landscape of blood-fed mosquitoes from Senegal and report the first detection of Jaagsiekte Sheep Retrovirus (JSRV)-related and Enzootic Nasal Tumor Virus 2 (ENTV-2)-related sequences, alongside endemic arboviruses. Our study aimed to investigate whether mosquitoes can serve as sentinels for detecting both pathogens and host-derived markers in complex ecosystems.

Methods: Mosquitoes were collected between 2016 and 2019 from three ecologically significant regions in Senegal (Louga, Barkedji, and Kedougou). Blood-fed mosquitoes were pooled and subjected to RNA extraction and metagenomic sequencing using Illumina NextSeq550. Sequencing data were analyzed with CZ-ID and BLAST for viral identification. RT-qPCR assays were designed to validate the presence of JSRV-related sequences, targeting conserved regions of the envelope gene and 3' untranslated region. Phylogenetic analysis was conducted using MAFFT and IQ-TREE to compare the detected sequence with global exogenous and endogenous JSRV references.

Results: Sequencing revealed a broad viral diversity across mosquito species, including insect-specific viruses, arboviruses (West Nile, Sindbis, Bagaza, Usutu, Barkedji), and two retroviral sequences. A JSRV-related sequence was confirmed in a pool from Barkedji (2019) and clustered phylogenetically with endogenous JSRV. A nearly complete ENTV-2 genome, closely related to pathogenic Chinese strains, was recovered from the same pool. Other viruses grouped within established African lineages, supporting persistent regional circulation.

Discussion: This study presents the first report of retroviral sequences detected in mosquitoes, alongside the identification of actively circulating arboviruses and insect-specific viruses, highlighting the broader potential of mosquitoes as environmental sentinels. While mosquitoes are not biological vectors for retroviruses, their ability to capture both host-derived retroviral material and pathogenic viral genomes through bloodmeals reinforces the value of xenosurveillance for monitoring livestock-vector-environment interactions. These findings contribute to broader efforts in integrated disease surveillance and underscore the utility of combining metagenomics with molecular diagnostics to detect diverse viral signals in high-risk ecological settings.

背景:众所周知,蚊子是节肢动物传播病毒的载体,但它们作为非节肢动物传播病毒的被动携带者的作用仍未得到充分研究。异种监测是一种利用吸血节肢动物对宿主和病原体遗传物质进行取样的方法,已成为病毒生态学中的一种有价值的工具。在这项研究中,我们调查了来自塞内加尔的血食蚊子的病毒景观,并报告了首次检测到Jaagsiekte Sheep Retrovirus (JSRV)相关序列和enzotic Nasal Tumor Virus 2 (ENTV-2)相关序列,以及地方性虫媒病毒。我们的研究旨在探讨在复杂的生态系统中,蚊子是否可以作为哨兵来检测病原体和宿主来源的标志物。方法:2016 - 2019年在塞内加尔卢加、巴凯吉和凯杜古3个生态重点地区采集蚊虫。采集吸血蚊子,采用Illumina NextSeq550进行RNA提取和宏基因组测序。测序数据用CZ-ID和BLAST进行病毒鉴定。RT-qPCR检测旨在验证jsrv相关序列的存在,靶向包膜基因的保守区域和3'未翻译区域。利用MAFFT和IQ-TREE进行系统发育分析,将检测到的序列与全球外源和内源JSRV参考文献进行比较。结果:测序揭示了蚊子物种间广泛的病毒多样性,包括昆虫特异性病毒、虫媒病毒(西尼罗河病毒、Sindbis病毒、Bagaza病毒、Usutu病毒、Barkedji病毒)和两个逆转录病毒序列。在Barkedji(2019)的一个池中确认了一个JSRV相关序列,并在系统发育上与内源性JSRV聚类。从同一池中恢复了与中国致病菌株密切相关的几乎完整的ENTV-2基因组。其他病毒在已建立的非洲谱系内分组,支持持续的区域传播。讨论:本研究首次报道了在蚊子中检测到逆转录病毒序列,以及鉴定出活跃传播的虫媒病毒和昆虫特异性病毒,突出了蚊子作为环境哨兵的更广泛潜力。虽然蚊子不是逆转录病毒的生物载体,但它们通过血食捕获宿主来源的逆转录病毒物质和致病病毒基因组的能力增强了异种监测对监测牲畜-媒介-环境相互作用的价值。这些发现有助于在综合疾病监测方面做出更广泛的努力,并强调了将宏基因组学与分子诊断相结合在高风险生态环境中检测各种病毒信号的实用性。
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引用次数: 0
Molecular characterization of multidrug-resistant Escherichia coli in the Greater Accra Region, Ghana: a 'One Health' approach. 加纳大阿克拉地区耐多药大肠杆菌的分子特征:“同一个健康”方法。
IF 3.8 Q2 INFECTIOUS DISEASES Pub Date : 2025-05-26 DOI: 10.1186/s42522-025-00154-8
Michael A Olu-Taiwo, Beverly Egyir, Christian Owusu-Nyantakyi, Akua Obeng Forson, Japheth A Opintan

Background: "One Health," a concept that highlights the need to bring on board multiple players and actors together to address major health problems, has been proposed to be effective in data gathering to mitigate the menace of antimicrobial drug resistance (AMR). Genomic data on extended-spectrum beta-lactamase-producing Escherichia coli (ESBL-EC) across humans, animals, and the environment are limited in low- and middle-income countries (LMICs), including Ghana.

Objective: This study determined the prevalence and patterns of AMR in E. coli from diverse sources, and characterized AMR genes, sequence types (STs), and plasmid replicon types in ESBL-EC.

Methodology: In a cross-sectional study, we randomly collected 1500 specimens from healthy humans, cattle, pigs, lettuce, spring onions, pork, beef, and soil samples, between January 2022 - April 2023. E. coli was isolated by routine culture and confirmed by MALDI-TOF MS. E. coli isolates were screened for their susceptibility against 13 antimicrobial agents and ESBL-production. ESBL-EC isolates were whole-genome sequenced (WGS), and in silico analysis was used to determine AMR genes, sequence types (STs), and plasmid replicon types.

Result: Of the 1500 specimens from diverse sources cultured, 140 (9.3%) were positive for E. coli. No E. coli was isolated from lettuce, spring onions, and pork. Fifty (35.7%) E. coli isolates were resistant to three or more of the antimicrobials tested, and 30 (21.4%) were ESBL-EC. The proportion of ESBL-EC identified in healthy humans were 14 (20%), cattle 9 (22.5%), pigs 3 (15%), beef 1 (50%) and soil 3 (37.5%). ESBL-EC isolates were highly resistant to ampicillin (100%), cefuroxime (100%), ciprofloxacin (53.6%), and tetracycline (58.2%). However, all ESBL-EC were susceptible to meropenem. Commonly detected AMR genes were blaTEM-1B (32%), tetA (48%) and sul2 (32%), with majority recovered from healthy human and soil samples. The dominant sequence types found were 12% (3) for ST10, ST 9312, ST 206, and ST 4151. The prevalent plasmid replicon types detected were IncFIB (Apoo1918) (40%) and IncFII (pCoo) (36%).

Conclusion: Within the metropolis surveyed, we identified MDR ESBL-EC harbouring various AMR genes and plasmid replicon types with diverse E. coli sequence types in healthy humans, animals, and the environment. The detection of blaCTX-M-15 in agricultural soil isolate is worrisome, emphasizing the need for a "One Health" approach in combating AMR.

背景:“一个健康”这一概念强调需要多方参与者和行为体共同解决重大卫生问题,已被提出用于有效收集数据以减轻抗微生物药物耐药性的威胁。在包括加纳在内的低收入和中等收入国家,关于人类、动物和环境中产生β -内酰胺酶的广谱大肠杆菌(ESBL-EC)的基因组数据有限。目的:本研究确定了不同来源大肠杆菌AMR的患病率和模式,并对ESBL-EC中AMR基因、序列类型(STs)和质粒复制子类型进行了表征。方法:在横断面研究中,我们在2022年1月至2023年4月期间随机收集了1500份健康人、牛、猪、生菜、小葱、猪肉、牛肉和土壤样本。通过常规培养分离得到大肠杆菌,并进行MALDI-TOF ms鉴定。对ESBL-EC分离株进行全基因组测序(WGS),并采用硅片分析确定AMR基因、序列类型(STs)和质粒复制子类型。结果:1500份不同来源的标本中,大肠杆菌阳性140份(9.3%)。在生菜、小葱和猪肉中没有分离到大肠杆菌。50株(35.7%)大肠杆菌对3种或3种以上抗菌药物耐药,30株(21.4%)为ESBL-EC。健康人中鉴定出ESBL-EC的比例为14种(20%)、牛9种(22.5%)、猪3种(15%)、牛肉1种(50%)和土壤3种(37.5%)。ESBL-EC分离株对氨苄西林(100%)、头孢呋辛(100%)、环丙沙星(53.6%)和四环素(58.2%)耐药。但所有ESBL-EC均对美罗培南敏感。常见的AMR基因为blatemm - 1b(32%)、tetA(48%)和sul2(32%),大部分从健康人和土壤样品中回收。ST10、ST 9312、ST 206和ST 4151的优势序列类型占12%(3)。常见的质粒复制子类型为IncFIB (Apoo1918)(40%)和IncFII (pCoo)(36%)。结论:在调查的大都市中,我们在健康的人、动物和环境中发现了含有多种AMR基因和质粒复制子类型的MDR ESBL-EC,具有不同的大肠杆菌序列类型。在农业土壤分离物中检测到blaCTX-M-15令人担忧,这强调了在抗击抗菌素耐药性方面采取“同一个健康”方法的必要性。
{"title":"Molecular characterization of multidrug-resistant Escherichia coli in the Greater Accra Region, Ghana: a 'One Health' approach.","authors":"Michael A Olu-Taiwo, Beverly Egyir, Christian Owusu-Nyantakyi, Akua Obeng Forson, Japheth A Opintan","doi":"10.1186/s42522-025-00154-8","DOIUrl":"10.1186/s42522-025-00154-8","url":null,"abstract":"<p><strong>Background: </strong>\"One Health,\" a concept that highlights the need to bring on board multiple players and actors together to address major health problems, has been proposed to be effective in data gathering to mitigate the menace of antimicrobial drug resistance (AMR). Genomic data on extended-spectrum beta-lactamase-producing Escherichia coli (ESBL-EC) across humans, animals, and the environment are limited in low- and middle-income countries (LMICs), including Ghana.</p><p><strong>Objective: </strong>This study determined the prevalence and patterns of AMR in E. coli from diverse sources, and characterized AMR genes, sequence types (STs), and plasmid replicon types in ESBL-EC.</p><p><strong>Methodology: </strong>In a cross-sectional study, we randomly collected 1500 specimens from healthy humans, cattle, pigs, lettuce, spring onions, pork, beef, and soil samples, between January 2022 - April 2023. E. coli was isolated by routine culture and confirmed by MALDI-TOF MS. E. coli isolates were screened for their susceptibility against 13 antimicrobial agents and ESBL-production. ESBL-EC isolates were whole-genome sequenced (WGS), and in silico analysis was used to determine AMR genes, sequence types (STs), and plasmid replicon types.</p><p><strong>Result: </strong>Of the 1500 specimens from diverse sources cultured, 140 (9.3%) were positive for E. coli. No E. coli was isolated from lettuce, spring onions, and pork. Fifty (35.7%) E. coli isolates were resistant to three or more of the antimicrobials tested, and 30 (21.4%) were ESBL-EC. The proportion of ESBL-EC identified in healthy humans were 14 (20%), cattle 9 (22.5%), pigs 3 (15%), beef 1 (50%) and soil 3 (37.5%). ESBL-EC isolates were highly resistant to ampicillin (100%), cefuroxime (100%), ciprofloxacin (53.6%), and tetracycline (58.2%). However, all ESBL-EC were susceptible to meropenem. Commonly detected AMR genes were blaTEM-1B (32%), tetA (48%) and sul2 (32%), with majority recovered from healthy human and soil samples. The dominant sequence types found were 12% (3) for ST10, ST 9312, ST 206, and ST 4151. The prevalent plasmid replicon types detected were IncFIB (Apoo1918) (40%) and IncFII (pCoo) (36%).</p><p><strong>Conclusion: </strong>Within the metropolis surveyed, we identified MDR ESBL-EC harbouring various AMR genes and plasmid replicon types with diverse E. coli sequence types in healthy humans, animals, and the environment. The detection of blaCTX-M-15 in agricultural soil isolate is worrisome, emphasizing the need for a \"One Health\" approach in combating AMR.</p>","PeriodicalId":94348,"journal":{"name":"One health outlook","volume":"7 1","pages":"31"},"PeriodicalIF":3.8,"publicationDate":"2025-05-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12107756/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144152993","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
One Health Economics approach to prevention and control of zoonotic and animal diseases - considerations for South Africa. 预防和控制人畜共患病和动物疾病的一种卫生经济学方法——对南非的考虑。
IF 3.8 Q2 INFECTIOUS DISEASES Pub Date : 2025-05-09 DOI: 10.1186/s42522-025-00142-y
Manana Mamabolo, Catherine Machalaba, Siphe Zantsi, Melinda K Rostal, William B Karesh, Peter Neil Thompson, Petronella Chaminuka

Outbreaks of animal and zoonotic diseases in South Africa are costly and raise concerns about national biosecurity. The interconnectedness of humans, livestock, wildlife and their social and ecological environment necessitates a holistic approach to prevention, preparedness and response to zoonotic and animal diseases. One Health is an increasingly accepted approach in contemporary science and policy spheres, but with limited consideration for economic dimensions. To more fully estimate costs of animal and zoonotic diseases in the country and to explore further scope for applying a One Health economics lens, the Agricultural Research Council of South Africa, in collaboration with partners, held a One Health Economics mini-congress to provide a platform where multidisciplinary stakeholders discussed practical examples, primarily from the Southern African region. Discussions at the mini-congress centred around One Health economics and opportunities, economic insights on prevention and control of Rift Valley fever (RVF), avian influenza and other zoonotic diseases, return on investment for One Health approaches, and insights from the natural resources and animal and human health sectors. Regional and international perspectives on multi-sectoral economic analysis and financing were also shared. Key recommendations from the mini-congress included promoting coordination, co-creation and co-implemented efforts to minimize effects of One Health challenges, and including economic aspects of multi-sectoral engagement to identify and reduce trade-offs and maximize co-benefits of strategies and programmes. Integration of economics in One Health fora, research and collaboration, and promotion of communities of practice and applied training to enhance learning and knowledge exchange were also identified as important.

在南非,动物和人畜共患疾病的暴发代价高昂,并引起人们对国家生物安全的担忧。人类、牲畜、野生动物及其社会和生态环境的相互联系,要求对人畜共患病和动物疾病采取全面的预防、准备和应对办法。同一个健康是当代科学和政策领域日益接受的方法,但对经济方面的考虑有限。为了更全面地估计该国动物和人畜共患疾病的成本,并进一步探索应用“同一卫生经济学”视角的范围,南非农业研究理事会与合作伙伴合作,举办了“同一卫生经济学”小型大会,为多学科利益攸关方讨论主要来自南部非洲区域的实际例子提供了一个平台。小型大会上的讨论集中在“同一个卫生”的经济学和机遇、预防和控制裂谷热、禽流感和其他人畜共患疾病的经济见解、“同一个卫生”方法的投资回报以及来自自然资源、动物和人类卫生部门的见解。与会者还分享了关于多部门经济分析和筹资的区域和国际观点。小型大会提出的主要建议包括促进协调、共同创造和共同实施努力,以尽量减少“同一个健康”挑战的影响,并包括多部门参与的经济方面,以确定和减少权衡,并最大限度地发挥战略和规划的共同效益。与会者还认为,将经济学纳入“同一个健康”论坛、开展研究与合作、促进实践社区和应用培训以加强学习和知识交流也很重要。
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引用次数: 0
Anthrax outbreak linked to consumption and handling of meat from unexpectedly deceased cattle, Kyotera district, Uganda, June-December 2023. 2023年6月至12月,乌干达Kyotera区,与食用和处理意外死亡牛的肉有关的炭疽疫情。
IF 3.8 Q2 INFECTIOUS DISEASES Pub Date : 2025-05-07 DOI: 10.1186/s42522-025-00151-x
Lawrence Tumusiime, Dominic Kizza, Anthony Kiyimba, Esther Nabatta, Susan Waako, Aggrey Byaruhanga, Benon Kwesiga, Richard Migisha, Lilian Bulage, Alex Riolexus Ario

Background: Anthrax is an infectious zoonotic disease caused by gram-positive, rod-shaped, and spore-forming bacteria known as Bacillus anthracis. It continues to be a disease of public health importance in Uganda, with sporadic outbreaks reported annually in many parts of the country. In November 2023, Kyotera District reported a strange illness, characterized by itching, rash, swelling, and skin lesions which was later confirmed as anthrax. We investigated to assess its magnitude, identify potential exposures, and propose evidence-based control measures.

Methods: A suspected cutaneous anthrax case was an acute onset of skin itching/swelling plus ≥ 2 of: skin reddening, lymphadenopathy, headache, fever or general body weakness. A suspected gastrointestinal anthrax case was an acute onset of ≥ 2 of: abdominal pain, vomiting, diarrhea, mouth lesions or neck swelling. A confirmed anthrax case was a suspected case with Bacillus anthracis PCR-positive results. To identify cases, we reviewed medical records and conducted community active case-finding. We conducted an unmatched case-control study and used logistic regression to identify risk factors of anthrax transmission. Controls were selected at a 1:4 ratio from the same villages as the case-patients.

Results: We identified 63 cases (46 suspected and 17 confirmed); 48 (76%) were male. Of the 63, 55 cases (87%) were cutaneous and 8 (13%) were gastrointestinal, with a mean age of 42 years. Overall attack rate (AR) was 3.1/1,000; males were more affected (AR = 4.5/1,000) than females (AR = 1.5/1,000). Case-fatality rate was 19% (n = 12). Among the 63 cases, 18 (29%) sought care from health facilities; 33 (52%) were managed by traditional healers. The odds of anthrax infection were highest in individuals who both consumed and handled infected meat (OR = 20.9, 95% CI: 8.8-49.8), followed by those who only consumed the meat (OR = 5.81, 95% CI: 2.12-15.9).

Conclusion: The anthrax outbreak in Kyotera District was primarily attributed to the consumption and handling of meat from cattle that had suddenly died. Poor health-seeking behavior and seeking care from traditional healers likely contributed to the high case fatality rate. To prevent future outbreaks, authorities should enforce cattle inspection protocols, expand anthrax vaccination campaigns, and enhance community education on safe meat handling and medical care-seeking practices.

背景:炭疽是一种传染性人畜共患疾病,由革兰氏阳性杆状芽孢杆菌引起。在乌干达,疟疾仍然是一种具有重要公共卫生意义的疾病,每年在该国许多地区都有零星暴发的报告。2023年11月,京特拉区报告了一种奇怪的疾病,其特征是瘙痒、皮疹、肿胀和皮肤损伤,后来证实为炭疽热。我们调查评估其程度,确定潜在暴露,并提出循证控制措施。方法:1例疑似皮肤炭疽病例为急性皮肤瘙痒/肿胀伴皮肤发红、淋巴结肿大、头痛、发热或全身无力≥2项。1例疑似胃肠道炭疽病例急性发作≥2项:腹痛、呕吐、腹泻、口腔病变或颈部肿胀。一宗炭疽确诊个案为怀疑个案,其炭疽杆菌聚合酶链反应结果呈阳性。为了确定病例,我们审查了医疗记录并进行了社区积极病例查找。我们进行了一项无与伦比的病例对照研究,并使用logistic回归来确定炭疽传播的危险因素。对照按1:4的比例从与病例-患者相同的村庄中选择。结果:共发现63例(疑似病例46例,确诊病例17例);48例(76%)为男性。63例患者中,皮肤病变55例(87%),胃肠道病变8例(13%),平均年龄42岁。总发病率(AR)为3.1/ 1000;男性受影响程度(AR = 4.5/ 1000)高于女性(AR = 1.5/ 1000)。病死率为19% (n = 12)。在63例病例中,18例(29%)向卫生机构求医;33例(52%)由传统治疗师治疗。炭疽感染的几率在食用和处理受感染肉类的人群中最高(OR = 20.9, 95% CI: 8.8-49.8),其次是那些只食用肉类的人群(OR = 5.81, 95% CI: 2.12-15.9)。结论:京特拉地区炭疽热暴发的主要原因是食用和处理突然死亡的牛的肉。不良的求医行为和向传统治疗师求医可能是造成高病死率的原因。为防止未来的疫情爆发,当局应执行牛只检查规程,扩大炭疽疫苗接种运动,并加强有关安全肉类处理和寻求医疗保健做法的社区教育。
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引用次数: 0
Enhancing community awareness of antimicrobial use and resistance through community conversations in rural Ethiopia. 通过在埃塞俄比亚农村开展社区对话,提高社区对抗菌素使用和耐药性的认识。
IF 3.8 Q2 INFECTIOUS DISEASES Pub Date : 2025-05-06 DOI: 10.1186/s42522-025-00148-6
Mamusha Lemma, Biruk Alemu, Kebede Amenu, Barbara Wieland, Theodore Knight-Jones

Background: Enhanced availability of veterinary drugs in Ethiopia has led to a growing use of these drugs in food-producing animals. However, the use of drugs in livestock is not commonly supervised by trained veterinarians. In addition, smallholder livestock producers often lack sufficient education and information about antimicrobial use to achieve the intended impact.

Methods: We used Community Conversations to raise awareness and knowledge about antimicrobial use and resistance within rural communities. We used single-sex and mixed-gender discussion groups to explore community members' perceptions and practices regarding antimicrobial use and resistance.

Results: The data revealed knowledge and behavioral patterns in antimicrobial use and resistance, which vary between communities based on gender roles and information sources. Initially, antimicrobial resistance was poorly understood, but gradually, frequent drug use, poor-quality medications, poor regulatory system, and poor veterinary service emerged as key contributors. Although communities recognized the importance of preventive measures to reduce antimicrobial use, knowledge gaps and resource constraints limit their implementation.

Conclusions: Raising awareness and knowledge within rural communities is an effective approach to promoting behavior change about antimicrobial use and resistance. The insights gained from understanding community perceptions and practices can help develop targeted education and training programs for stakeholders involved in the antimicrobial supply chain.

背景:埃塞俄比亚兽药供应的增加导致这些药物在食用动物中的使用越来越多。然而,在牲畜中使用药物通常不受训练有素的兽医的监督。此外,小农畜牧业生产者往往缺乏关于抗菌药物使用的充分教育和信息,无法实现预期的影响。方法:我们采用社区对话的方式提高农村社区对抗菌药物使用和耐药性的认识和知识。我们使用单性别和混合性别讨论小组来探讨社区成员对抗菌素使用和耐药性的看法和做法。结果:数据揭示了抗菌素使用和耐药性的知识和行为模式,根据性别角色和信息来源,社区之间存在差异。最初,人们对抗菌素耐药性知之甚少,但逐渐地,频繁用药、药物质量差、监管制度差和兽医服务差成为主要因素。虽然社区认识到预防措施对减少抗微生物药物使用的重要性,但知识差距和资源限制限制了这些措施的实施。结论:提高农村社区的认识和知识是促进改变抗微生物药物使用和耐药性行为的有效途径。从了解社区观念和实践中获得的见解有助于为参与抗微生物药物供应链的利益相关者制定有针对性的教育和培训计划。
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引用次数: 0
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One health outlook
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