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Targeting Viperin prevents coxsackievirus B3-induced acute heart failure. 靶向Viperin预防柯萨奇病毒b3引起的急性心力衰竭。
IF 13 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-04-08 DOI: 10.1038/s41421-025-00778-0
Yukang Yuan, Liping Qian, Ying Miao, Qun Cui, Ting Cao, Yong Yu, Tingting Zhang, Qian Zhao, Renxia Zhang, Tengfei Ren, Yibo Zuo, Qian Du, Caixia Qiao, Qiuyu Wu, Zhijin Zheng, Minqi Li, Y Eugene Chinn, Wei Xu, Tianqing Peng, Ruizhen Chen, Sidong Xiong, Hui Zheng

Coxsackievirus B3 (CVB3)-induced acute heart failure (AHF) is a common cause of cardiogenic death in young- and middle-aged people. However, the key molecular events linking CVB3 to AHF remain largely unknown, resulting in a lack of targeted therapy strategies thus far. Here, we unexpectedly found that Viperin deficiency does not promote CVB3 infection but protects mice from CVB3-induced AHF. Importantly, cardiac-specific expression of Viperin can induce cardiac dysfunction. Mechanistically, CVB3-encoded 3C protease rescues Viperin protein expression in cardiomyocytes by lowering UBE4A. Viperin in turn interacts with and reduces STAT1 to activate SGK1-KCNQ1 signaling, and eventually leads to cardiac electrical dysfunction and subsequent AHF. Furthermore, we designed an interfering peptide VS-IP1, which blocked Viperin-mediated STAT1 degradation and therefore prevented CVB3-induced AHF. This study established the first signaling link between CVB3 and cardiac electrical dysfunction, and revealed the potential of interfering peptides targeting Viperin for the treatment of CVB3-induced AHF.

柯萨奇病毒B3 (CVB3)引起的急性心力衰竭(AHF)是青壮年人群心源性死亡的常见原因。然而,将CVB3与AHF联系起来的关键分子事件在很大程度上仍然未知,导致迄今为止缺乏靶向治疗策略。在这里,我们意外地发现Viperin缺乏不会促进CVB3感染,而是保护小鼠免受CVB3诱导的AHF。重要的是,Viperin的心脏特异性表达可以诱导心功能障碍。机制上,cvb3编码的3C蛋白酶通过降低UBE4A来挽救心肌细胞中Viperin蛋白的表达。Viperin反过来与STAT1相互作用并降低STAT1以激活SGK1-KCNQ1信号,最终导致心电功能障碍和随后的AHF。此外,我们设计了一种干扰肽VS-IP1,它可以阻断viperin介导的STAT1降解,从而阻止cvb3诱导的AHF。本研究首次建立了CVB3与心电功能障碍之间的信号联系,并揭示了针对Viperin的干扰肽治疗CVB3诱导的AHF的潜力。
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引用次数: 0
ShennongAlpha: an AI-driven sharing and collaboration platform for intelligent curation, acquisition, and translation of natural medicinal material knowledge. 神农阿尔法:人工智能驱动的天然药材知识智能管理、获取和翻译共享和协作平台。
IF 13 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-04-01 DOI: 10.1038/s41421-025-00776-2
Zijie Yang, Yongjing Yin, Chaojun Kong, Tiange Chi, Wufan Tao, Yue Zhang, Tian Xu

Natural Medicinal Materials (NMMs) have a long history of global clinical applications and a wealth of records and knowledge. Although NMMs are a major source for drug discovery and clinical application, the utilization and sharing of NMM knowledge face crucial challenges, including the standardized description of critical information, efficient curation and acquisition, and language barriers. To address these, we developed ShennongAlpha, an artificial intelligence (AI)-driven sharing and collaboration platform for intelligent knowledge curation, acquisition, and translation. For standardized knowledge curation, the platform introduced a Systematic Nomenclature to enable accurate differentiation and identification of NMMs. More than fourteen thousand Chinese NMMs have been curated into the platform along with their knowledge. Furthermore, the platform pioneered chat-based knowledge acquisition, standardized machine translation, and collaborative knowledge updating. Together, our study represents the first major advance in leveraging AI to empower NMM knowledge sharing, which not only marks a novel application of AI for science, but also will significantly benefit the global biomedical, pharmaceutical, physician, and patient communities.

天然药物(nmm)具有悠久的全球临床应用历史和丰富的记录和知识。虽然NMM是药物发现和临床应用的主要来源,但NMM知识的利用和共享面临着重大挑战,包括关键信息的标准化描述、有效的管理和获取以及语言障碍。为了解决这些问题,我们开发了神农alpha,这是一个人工智能驱动的共享和协作平台,用于智能知识管理、获取和翻译。为了标准化的知识管理,该平台引入了一个系统命名法,以便准确区分和识别nmm。超过一万四千名中国nmm连同他们的知识一起被收录到这个平台上。此外,该平台开创了基于聊天的知识获取、标准化机器翻译和协作知识更新。总之,我们的研究代表了利用人工智能增强NMM知识共享方面的第一个重大进展,这不仅标志着人工智能在科学领域的新应用,而且将显著造福全球生物医学、制药、医生和患者群体。
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引用次数: 0
Molecular mechanisms of urate transport by the native human URAT1 and its inhibition by anti-gout drugs. 天然人URAT1转运尿酸盐的分子机制及抗痛风药物对其的抑制作用。
IF 13 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-04-01 DOI: 10.1038/s41421-025-00779-z
Canrong Wu, Chao Zhang, Sanshan Jin, James Jiqi Wang, Antao Dai, Jiuyin Xu, Heng Zhang, Xuemei Yang, Xinheng He, Qingning Yuan, Wen Hu, Youwei Xu, Mingwei Wang, Yi Jiang, Dehua Yang, H Eric Xu

Gout, a common and painful disease, stems from hyperuricemia, where elevated blood urate levels lead to urate crystal formation in joints and kidneys. The human urate transporter 1 (hURAT1) plays a critical role in urate homeostasis by facilitating urate reabsorption in the renal proximal tubule, making it a key target for gout therapy. Pharmacological inhibition of hURAT1 with drugs such as dotinurad, benzbromarone, lesinurad, and verinurad promotes urate excretion and alleviates gout symptoms. Here, we present cryo-electron microscopy structures of native hURAT1 bound with these anti-gout drugs in the inward-open state, and with urate in inward-open, outward-open, and occluded states. Complemented by mutagenesis and cell-based assays, these structures reveal the mechanisms of urate reabsorption and hURAT1 inhibition. Our findings elucidate the molecular basis of urate transport and anti-gout medication action and provide a structural framework for the rational design of next-generation therapies for hyperuricemia and gout.

痛风是一种常见的疼痛性疾病,起源于高尿酸血症,血尿酸水平升高导致关节和肾脏形成尿酸晶体。人类尿酸转运蛋白1 (hURAT1)通过促进肾近端小管的尿酸重吸收,在尿酸稳态中起关键作用,使其成为痛风治疗的关键靶点。多替努拉德、苯溴马隆、莱西努拉德和维里努拉德等药物对hURAT1的药理抑制可促进尿酸的准确排泄,减轻痛风症状。在这里,我们展示了天然hURAT1在内向开放状态下与这些抗痛风药物结合,并在内向开放、外向开放和闭塞状态下与尿酸结合的低温电镜结构。通过诱变和基于细胞的实验,这些结构揭示了尿酸重吸收和hURAT1抑制的机制。我们的研究结果阐明了尿酸盐转运和抗痛风药物作用的分子基础,并为合理设计下一代高尿酸血症和痛风疗法提供了结构框架。
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引用次数: 0
Asymmetric activation of dimeric ATM/Tel1 kinase. 二聚体ATM/Tel1激酶的不对称活化。
IF 13 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-03-25 DOI: 10.1038/s41421-025-00786-0
Po Wang, Zexuan Zheng, Guangxian Wang, Zhanpeng Zhao, Dong Qian, Gang Cai, Xuejuan Wang
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引用次数: 0
Inhibiting hedgehog signal by a patched-1 antibody. 通过一种patched-1抗体抑制hedgehog信号。
IF 13 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-03-25 DOI: 10.1038/s41421-025-00772-6
Qinli Hu, Xiaofeng Qi, Linda Donnelly, Xiaochun Li
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引用次数: 0
Identification of neutralizing nanobodies protecting against poxvirus infection. 抗痘病毒感染的中和纳米体的鉴定。
IF 13 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-03-25 DOI: 10.1038/s41421-025-00771-7
Xuehua Yang, Li Guo, Huarui Duan, Miao Fan, Fengwen Xu, Xiaojing Chi, Shengnan Pan, Xiuying Liu, Xinhui Zhang, Peixiang Gao, Fangyuan Zhang, Xinyi Wang, Fei Guo, Jiwan Ge, Lili Ren, Wei Yang

An outbreak of mpox has triggered concerns regarding the adequacy of intervention strategies. Passive immunity conferred by neutralizing antibodies exhibits potential in the prophylaxis and treatment of orthopoxvirus infections. Despite this, the investigations of effective antibody therapeutics have been hindered by the varied nature of orthopoxvirus envelope proteins and the intricate mechanisms underpinning viral invasion. Our study involves the production of six mpox virus (MPXV) envelope proteins, which are relatively conservative and considered to play a role in the neutralization process. We employed a synthetic nanobody (Nb) library to derive a broad array of specific Nbs against these viral proteins. We identified a cross-reactive Nb, termed M1R-01, which targets the M1R protein and effectively neutralizes both vaccinia virus (VACV) and MPXV. Notably, the M1R-01-based antibody strategy provided optimal protection against a lethal VACV challenge in mice. Additionally, we determined the crystal structure of the M1R-Nb complex, uncovering novel binding attributes of M1R-01 and detailed conformational epitope information. This work provides a promising candidate for the therapy and prophylaxis of orthopoxvirus infections.

麻疹的爆发引发了对干预战略是否充分的关注。中和抗体产生的被动免疫在预防和治疗正痘病毒感染方面具有潜力。尽管如此,正痘病毒包膜蛋白的不同性质和病毒入侵的复杂机制阻碍了有效抗体疗法的研究。我们的研究涉及六种相对保守的m痘病毒(MPXV)包膜蛋白的产生,这些蛋白被认为在中和过程中发挥作用。我们使用合成纳米体(Nb)文库来获得一系列针对这些病毒蛋白的特异性纳米体。我们发现了一种交叉反应的Nb,称为M1R-01,它靶向M1R蛋白并有效地中和痘苗病毒(VACV)和MPXV。值得注意的是,基于m1r -01的抗体策略对小鼠致命的VACV攻击提供了最佳的保护。此外,我们确定了M1R-Nb复合物的晶体结构,揭示了M1R-01的新结合属性和详细的构象表位信息。这项工作为正痘病毒感染的治疗和预防提供了一个有希望的候选物。
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引用次数: 0
Structural characterization reveals substrate recognition by the taurine transporter TauT. 结构表征揭示了牛磺酸转运蛋白TauT对底物的识别。
IF 13 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-03-20 DOI: 10.1038/s41421-025-00785-1
Hao Xu, Qinru Bai, Han Wang, Jun Zhao, Aiping Guo, Renjie Li, Qihao Chen, Yiqing Wei, Na Li, Zhuo Huang, Yan Zhao
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引用次数: 0
Trans-Golgi network tethering factors regulate TBK1 trafficking and promote the STING-IFN-I pathway. 反式高尔基网络束缚因子调节TBK1的转运并促进STING-IFN-I通路。
IF 13 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-03-18 DOI: 10.1038/s41421-024-00763-z
Jinrui Wang, Shenghui Niu, Xiao Hu, Tianxing Li, Shengduo Liu, Yingfeng Tu, Zehua Shang, Lin Zhao, Pinglong Xu, Jingwen Lin, Lu Chen, Daniel D Billadeau, Da Jia

The cGAS-STING pathway mediates the innate immune response to cytosolic DNA, contributing to surveillance against microbial invasion or cellular damage. Once activated, STING recruits TBK1 at the trans-Golgi network (TGN), which in turn phosphorylates IRF3 to induce type I interferon (IFN-I) expression. In contrast to STING, little is known about how TBK1 is transported to the TGN for activation. Here, we show that multiple TGN tethering factors, a group of proteins involved in vesicle capturing, are indispensable for STING-IFN-I signaling. Deletion of TBC1D23, a recently reported tethering factor, in mice impairs the STING-IFN-I signaling, but with insignificant effect on STING-NF-κB signaling. Mechanistically, TBC1D23 interacts with TBK1 via the WASH complex subunit FAM21 and promotes its endosome-to-TGN translocation. Furthermore, multiple TGN tethering factors were reduced in aged mice and senescent fibroblasts. In summary, our study uncovers that TGN tethering factors are key regulators of the STING-IFN-I signaling and suggests that their reduction in senescence may produce aberrant STING signaling.

cGAS-STING通路介导对细胞质DNA的先天免疫反应,有助于监测微生物入侵或细胞损伤。一旦被激活,STING在反式高尔基网络(TGN)上招募TBK1,进而磷酸化IRF3诱导I型干扰素(IFN-I)表达。与STING相反,对于TBK1如何转运到TGN活化知之甚少。本研究表明,多种TGN系固因子(一组参与囊泡捕获的蛋白质)对于STING-IFN-I信号传导是不可或缺的。最近报道的拴系因子TBC1D23在小鼠中缺失会损害STING-IFN-I信号,但对STING-NF-κB信号的影响不显著。机制上,TBC1D23通过WASH复合物亚基FAM21与TBK1相互作用,促进其内体到tgn的易位。此外,老年小鼠和衰老成纤维细胞中多种TGN捆绑因子减少。总之,我们的研究发现TGN捆绑因子是STING- ifn - i信号的关键调节因子,并提示它们在衰老过程中的减少可能会产生异常的STING信号。
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引用次数: 0
Spatiotemporal single-cell architecture of gene expression in the Caenorhabditis elegans germ cells. 秀丽隐杆线虫生殖细胞基因表达的时空单细胞结构。
IF 13 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-03-18 DOI: 10.1038/s41421-025-00790-4
Lili Li, Xiaoyin Tang, Xuanxuan Guo, Di Rao, Lin Zeng, Junchao Xue, Shuxian Liu, Shikui Tu, En-Zhi Shen

Spermatogenesis is an intricate and tightly controlled process encompassing various layers of gene expression regulation. Despite the advance of our current understanding, the developmental trajectory and regulatory mechanisms dictating spermatogenesis remain elusive. In this study, we have generated single-cell gene expression profiles for Caenorhabditis elegans sperm cells and constructed gene regulatory networks alongside the developmental trajectories of these cells. Our findings indicate that each pre- and post-developmental stage is closely linked by co-expressed genes, while simultaneously being uniquely identified by the combined expression of specific gene families. To illustrate the applicability of this exhaustive gene expression catalog, we used gene regulatory networks to uncover potential transcription factors for (1) the expression of genes in the phosphorylation pathway, identifying NHR-23-to-phosphatase regulation for the meiotic cell division process; and (2) the expression of constituent components of small RNA pathways, identifying ELT-1-to-Argonaute protein regulation for siRNA maintenance and sperm activation. We expect that this sperm cell-specific gene expression directory will prompt investigations into the underlying mechanisms determining anatomy, differentiation, and function across the reproductive system. Finally, our expression data can be explored using the web application CelegansGermAtlas ( https://scgerm-atlas.sjtu.edu.cn/website/#/home ).

精子发生是一个复杂而严格控制的过程,包含了不同层次的基因表达调控。尽管我们目前的理解取得了进展,但决定精子发生的发育轨迹和调节机制仍然难以捉摸。在这项研究中,我们生成了秀丽隐杆线虫精子细胞的单细胞基因表达谱,并构建了这些细胞发育轨迹的基因调控网络。我们的研究结果表明,每个发育前和发育后阶段都与共表达基因密切相关,同时也被特定基因家族的联合表达所独特识别。为了说明这种详尽的基因表达目录的适用性,我们使用基因调控网络来揭示以下潜在的转录因子:(1)磷酸化途径中基因的表达,确定nhr -23- To -磷酸酶对减数分裂细胞分裂过程的调控;(2)小RNA通路组成成分的表达,鉴定ELT-1-to-Argonaute蛋白对siRNA维持和精子活化的调控作用。我们期望这个精子细胞特异性基因表达目录将促进对决定整个生殖系统解剖、分化和功能的潜在机制的研究。最后,我们的表达式数据可以使用web应用程序CelegansGermAtlas (https://scgerm-atlas.sjtu.edu.cn/website/#/home)进行探索。
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引用次数: 0
From lipotoxicity to pan-lipotoxicity. 从脂肪毒性到泛脂肪毒性。
IF 13 1区 生物学 Q1 CELL BIOLOGY Pub Date : 2025-03-18 DOI: 10.1038/s41421-025-00787-z
Yiping Cheng, Shanshan Shao, Zhen Wang, Qingbo Guan, Huaxue Li, Guodong Liu, Haiqing Zhang, Xiude Fan, Jiajun Zhao
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引用次数: 0
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Cell Discovery
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