首页 > 最新文献

Cancers最新文献

英文 中文
GNAQ/GNA11-Related Benign and Malignant Entities-A Common Histoembriologic Origin or a Tissue-Dependent Coincidence. 与 GNAQ/GNA11 相关的良性和恶性实体--共同的组织胚胎学起源还是组织依赖性巧合?
IF 4.5 2区 医学 Q1 ONCOLOGY Pub Date : 2024-10-30 DOI: 10.3390/cancers16213672
Justyna Pilch, Jakub Mizera, Maciej Tota, Piotr Donizy

Uveal melanoma (UM), recognized as the most prevalent primary intraocular malignancy in adults, is primarily driven by mutations in the GNAQ and GNA11 genes. These genetic alterations are also implicated in other conditions, which exhibit distinct morphological characteristics. In this article, we investigate the role of GNAQ and GNA11 mutations across varied disorders (e.g., UM, skin blue nevi, and hemangiomas), emphasizing the shared pathogenic mechanisms that connect them despite their differing clinical manifestations. By investigating the molecular pathways affected by these mutations, we provide insights into the potential for targeted therapies that could address not only UM but also other disorders associated with GNAQ/GNA11 mutations. Moreover, we discuss the role of SOX10-positive perivascular cells that may be implicated in the complex pathophysiology of GNAQ/GNA11-related entities. Understanding the common molecular foundation of these conditions opens new ways for research and treatment opportunities, potentially leading to more effective, personalized therapeutic strategies.

葡萄膜黑色素瘤(UM)是公认的成人中最常见的原发性眼内恶性肿瘤,主要由 GNAQ 和 GNA11 基因突变引起。这些基因改变也与其他表现出不同形态特征的疾病有关。在本文中,我们研究了 GNAQ 和 GNA11 基因突变在各种疾病(如 UM、皮肤蓝痣和血管瘤)中的作用,强调尽管临床表现不同,但它们之间存在共同的致病机制。通过研究受这些突变影响的分子通路,我们深入了解了靶向疗法的潜力,这些疗法不仅可以治疗 UM,还可以治疗与 GNAQ/GNA11 突变相关的其他疾病。此外,我们还讨论了 SOX10 阳性的血管周围细胞在 GNAQ/GNA11 相关疾病的复杂病理生理学中可能扮演的角色。了解这些病症的共同分子基础为研究和治疗开辟了新的途径,有可能带来更有效的个性化治疗策略。
{"title":"GNAQ/GNA11-Related Benign and Malignant Entities-A Common Histoembriologic Origin or a Tissue-Dependent Coincidence.","authors":"Justyna Pilch, Jakub Mizera, Maciej Tota, Piotr Donizy","doi":"10.3390/cancers16213672","DOIUrl":"10.3390/cancers16213672","url":null,"abstract":"<p><p>Uveal melanoma (UM), recognized as the most prevalent primary intraocular malignancy in adults, is primarily driven by mutations in the <i>GNAQ</i> and <i>GNA11</i> genes. These genetic alterations are also implicated in other conditions, which exhibit distinct morphological characteristics. In this article, we investigate the role of <i>GNAQ</i> and <i>GNA11</i> mutations across varied disorders (e.g., UM, skin blue nevi, and hemangiomas), emphasizing the shared pathogenic mechanisms that connect them despite their differing clinical manifestations. By investigating the molecular pathways affected by these mutations, we provide insights into the potential for targeted therapies that could address not only UM but also other disorders associated with <i>GNAQ</i>/<i>GNA11</i> mutations. Moreover, we discuss the role of SOX10-positive perivascular cells that may be implicated in the complex pathophysiology of GNAQ/GNA11-related entities. Understanding the common molecular foundation of these conditions opens new ways for research and treatment opportunities, potentially leading to more effective, personalized therapeutic strategies.</p>","PeriodicalId":9681,"journal":{"name":"Cancers","volume":"16 21","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-10-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11544895/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142635912","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Lethal Prostate Cancer in Mexico: Data from the Can.Prost Mexican Registry and a Project for Early Detection. 墨西哥致命性前列腺癌:来自墨西哥 Can.Prost 登记处和早期检测项目的数据。
IF 4.5 2区 医学 Q1 ONCOLOGY Pub Date : 2024-10-30 DOI: 10.3390/cancers16213675
Miguel Angel Jimenez Rios, Anna Scavuzzo, Nancy Reynoso Noverón, Caleb García Arango, Ivan Calvo Vazquez, Alonso Hurtado Vázquez, Oscar Gerardo Arrieta Rodriguez, Miguel Angel Jimenez Davila, Maria Chiara Sighinolfi, Bernardo Rocco

Introduction: Epidemiological data are crucial for adopting primary and secondary prevention strategies and to develop screening protocols against prostate cancer (PCa). Despite the comprehensive characterization of PCa across White and Black men, there is a lack of data from the Mexican population. This manuscript presents data from the Can.Prost registry that captures PCa trends over the past two decades in Mexico City; furthermore, we aimed to compare clinical differences and oncological outcomes before and after the promotion of early detection actions through a campaign against PCa that occurred in 2014.

Methods: A retrospective observational study on newly diagnosed Mexican PCa patients was carried out at the Instituto Nacional de Cancerología (INCan) in Mexico City. During 2014 and 2015, a project for the early diagnosis of PCa ("OPUS program") was launched in the aforementioned tertiary hospital. Starting at the age of 45 years, all men were invited for a PSA measurement and a specialist urologist consultation. All individuals with clinical or biochemical suspicion of PCa (PSA > 4 ng/mL), in the context of age and prostate volume, underwent ultrasound-guided transrectal prostate biopsy. Then, patients with pathologically confirmed prostate cancer were stratified according to the year of diagnosis: Group A accounted for those diagnosed between 2000 and 2014 and Group B for those patients diagnosed in the timeframe of 2015-2021. Comparisons of PCa characteristics, treatment modalities and oncologic outcomes between Group A and B were performed.

Results: Overall, we collected data from 2759 PCa patients from 2000 to 2021. The median PSA at baseline was 32 ng/mL, and 25% had a family history of PCa. Overall, 25.8% were asymptomatic and 46% had a non-metastatic presentation. After the OPUS campaign, PSA at diagnosis was significantly lower across all age groups. The incidence of PCa diagnosis in asymptomatic men was higher (31.4% vs. 19.9%) and a higher proportion of men were diagnosed with organ-confined, palpable disease (46% vs. 28%) (p < 0.001). The rate of patients eligible for active/radical treatment was higher after the OPUS campaign (patients who received surgery increased from 12.78% to 32.41%; patients who underwent radiation increased from 28.38% to 49.61%). The proportion of patients diagnosed with non-clinically significant disease was negligible and remained stable across time.

Conclusions: PCa in Mexican patients displays aggressive features at diagnosis, whereas the rate of non-significant disease is negligible. The introduction of early detection strategies may lead to lower symptomatic and metastatic PCa and higher opportunities for radical treatment. This emphasizes the need for public awareness and for adjustment of screening strategies to the peculiarities of the Mexican population.

导言:流行病学数据对于采取一级和二级预防策略以及制定前列腺癌(PCa)筛查方案至关重要。尽管对白人和黑人男性的 PCa 特征进行了全面描述,但缺乏来自墨西哥人群的数据。本手稿介绍了Can.Prost登记处的数据,这些数据反映了墨西哥城过去二十年来的PCa发病趋势;此外,我们还旨在比较2014年通过开展PCa防治活动促进早期检测行动前后的临床差异和肿瘤结果:墨西哥国家癌症研究所(INCan)对新诊断出的墨西哥 PCa 患者进行了一项回顾性观察研究。2014年和2015年期间,上述三甲医院启动了PCa早期诊断项目("OPUS计划")。从 45 岁开始,所有男性都被邀请接受 PSA 测量和泌尿科专家会诊。根据年龄和前列腺体积,对所有临床或生化怀疑患有 PCa(PSA > 4 ng/mL)的患者进行超声引导下的经直肠前列腺活检。然后,根据诊断年份对病理确诊的前列腺癌患者进行分层:A 组为 2000 年至 2014 年期间确诊的患者,B 组为 2015 年至 2021 年期间确诊的患者。我们对 A 组和 B 组的 PCa 特征、治疗方式和肿瘤结果进行了比较:总体而言,我们收集了2000年至2021年期间2759名PCa患者的数据。基线PSA中位数为32纳克/毫升,25%的患者有PCa家族史。总体而言,25.8%的患者无症状,46%的患者无转移。在开展 OPUS 运动后,各年龄组确诊时的 PSA 均明显降低。无症状男性的 PCa 诊断率更高(31.4% 对 19.9%),被诊断为器官局限性可触及疾病的男性比例更高(46% 对 28%)(p < 0.001)。开展 OPUS 运动后,符合积极/放射治疗条件的患者比例更高(接受手术治疗的患者从 12.78% 增加到 32.41%;接受放射治疗的患者从 28.38% 增加到 49.61%)。确诊为无临床意义疾病的患者比例微乎其微,且在不同时期保持稳定:结论:墨西哥患者的 PCa 在诊断时表现出侵袭性特征,而无临床意义疾病的比例微乎其微。早期检测策略的引入可能会降低有症状和转移性 PCa 的发病率,增加根治性治疗的机会。这就强调了提高公众意识和根据墨西哥人口特点调整筛查策略的必要性。
{"title":"Lethal Prostate Cancer in Mexico: Data from the Can.Prost Mexican Registry and a Project for Early Detection.","authors":"Miguel Angel Jimenez Rios, Anna Scavuzzo, Nancy Reynoso Noverón, Caleb García Arango, Ivan Calvo Vazquez, Alonso Hurtado Vázquez, Oscar Gerardo Arrieta Rodriguez, Miguel Angel Jimenez Davila, Maria Chiara Sighinolfi, Bernardo Rocco","doi":"10.3390/cancers16213675","DOIUrl":"10.3390/cancers16213675","url":null,"abstract":"<p><strong>Introduction: </strong>Epidemiological data are crucial for adopting primary and secondary prevention strategies and to develop screening protocols against prostate cancer (PCa). Despite the comprehensive characterization of PCa across White and Black men, there is a lack of data from the Mexican population. This manuscript presents data from the Can.Prost registry that captures PCa trends over the past two decades in Mexico City; furthermore, we aimed to compare clinical differences and oncological outcomes before and after the promotion of early detection actions through a campaign against PCa that occurred in 2014.</p><p><strong>Methods: </strong>A retrospective observational study on newly diagnosed Mexican PCa patients was carried out at the Instituto Nacional de Cancerología (INCan) in Mexico City. During 2014 and 2015, a project for the early diagnosis of PCa (\"OPUS program\") was launched in the aforementioned tertiary hospital. Starting at the age of 45 years, all men were invited for a PSA measurement and a specialist urologist consultation. All individuals with clinical or biochemical suspicion of PCa (PSA > 4 ng/mL), in the context of age and prostate volume, underwent ultrasound-guided transrectal prostate biopsy. Then, patients with pathologically confirmed prostate cancer were stratified according to the year of diagnosis: Group A accounted for those diagnosed between 2000 and 2014 and Group B for those patients diagnosed in the timeframe of 2015-2021. Comparisons of PCa characteristics, treatment modalities and oncologic outcomes between Group A and B were performed.</p><p><strong>Results: </strong>Overall, we collected data from 2759 PCa patients from 2000 to 2021. The median PSA at baseline was 32 ng/mL, and 25% had a family history of PCa. Overall, 25.8% were asymptomatic and 46% had a non-metastatic presentation. After the OPUS campaign, PSA at diagnosis was significantly lower across all age groups. The incidence of PCa diagnosis in asymptomatic men was higher (31.4% vs. 19.9%) and a higher proportion of men were diagnosed with organ-confined, palpable disease (46% vs. 28%) (<i>p</i> < 0.001). The rate of patients eligible for active/radical treatment was higher after the OPUS campaign (patients who received surgery increased from 12.78% to 32.41%; patients who underwent radiation increased from 28.38% to 49.61%). The proportion of patients diagnosed with non-clinically significant disease was negligible and remained stable across time.</p><p><strong>Conclusions: </strong>PCa in Mexican patients displays aggressive features at diagnosis, whereas the rate of non-significant disease is negligible. The introduction of early detection strategies may lead to lower symptomatic and metastatic PCa and higher opportunities for radical treatment. This emphasizes the need for public awareness and for adjustment of screening strategies to the peculiarities of the Mexican population.</p>","PeriodicalId":9681,"journal":{"name":"Cancers","volume":"16 21","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-10-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11544922/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142615742","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
TYK2 Protein Expression and Its Potential as a Tissue-Based Biomarker for the Diagnosis of Colorectal Cancer. TYK2 蛋白表达及其作为基于组织的结直肠癌诊断生物标记物的潜力
IF 4.5 2区 医学 Q1 ONCOLOGY Pub Date : 2024-10-30 DOI: 10.3390/cancers16213665
Łukasz Zadka, Adam Ustaszewski, Natalia Glatzel-Plucińska, Agnieszka Rusak, Izabela Łaczmańska, Katarzyna Ratajczak-Wielgomas, Alicja Kmiecik, Aleksandra Piotrowska, Katarzyna Haczkiewicz-Leśniak, Agnieszka Gomułkiewicz, Magdalena Kostrzewska-Poczekaj, Piotr Dzięgiel

Background/objectives: The aim of this study was to examine the expression of TYK2 in colorectal cancer (CRC) and to determine the potential diagnostic and prognostic significance of this kinase.

Methods: Digital image analysis was performed to assess immunohistochemical TYK2 reactivity.

Results: There were significant differences for all positive pixels between CRC and normal colonic mucosa, with higher TYK2 expression levels observed in surgical margins than in adenocarcinomas (p = 0.0004). Paired t tests showed elevated immunoreactivity for overall TYK2 expression in matched pairs of CRC with adjacent surgical margins (p < 0.0001). Higher percentages of weak (p < 0.0001) and strong pixels (p = 0.0260) were detected in normal colonic mucosa than in cancer tissues. To distinguish cancer from normal intestinal mucosa, the following cutoffs for the TYK2 immune score were found: 29.5% for all cases and 31% for matched pairs. Tumor budding (Bd) was negatively correlated with the percentage of strong pixels for TYK2 (ρ = -0.270, p = 0.0096). The percentage of strong pixels was significantly elevated for the T parameter (p = 0.0428). There was a positive correlation between the number of involved lymph nodes and weak pixels (ρ = 0.239, p = 0.0242). Immunofluorescence staining showed significantly higher signal intensities in colonic mucosa than in CRC. The protein level of TYK2 was significantly higher in controls than in cancer tissues. TEM imaging showed lower levels of TYK2 in cancer than in ulcerative colitis.

Conclusions: TYK2 protein expression may bring diagnostic value in patients diagnosed with CRC.

背景/目的:本研究旨在检测TYK2在结直肠癌(CRC)中的表达,并确定该激酶在诊断和预后方面的潜在意义:方法:采用数字图像分析评估免疫组化TYK2的反应性:结果:CRC和正常结肠粘膜的所有阳性像素均存在明显差异,手术边缘的TYK2表达水平高于腺癌(p = 0.0004)。配对 t 检验显示,在相邻手术切缘的配对 CRC 中,整体 TYK2 表达的免疫反应性升高(p < 0.0001)。在正常结肠粘膜中检测到的弱像素(p < 0.0001)和强像素(p = 0.0260)的百分比高于癌症组织。为区分癌症和正常肠粘膜,TYK2 免疫评分的临界值如下:所有病例为 29.5%,配对病例为 31%。肿瘤萌发(Bd)与 TYK2 强像素百分比呈负相关(ρ = -0.270,p = 0.0096)。T 参数的强像素百分比显著升高(p = 0.0428)。受累淋巴结数量与弱像素之间呈正相关(ρ = 0.239,p = 0.0242)。免疫荧光染色显示结肠粘膜的信号强度明显高于 CRC。对照组的 TYK2 蛋白水平明显高于癌症组织。TEM成像显示,癌症中的TYK2水平低于溃疡性结肠炎:结论:TYK2 蛋白表达可为确诊为 CRC 的患者带来诊断价值。
{"title":"TYK2 Protein Expression and Its Potential as a Tissue-Based Biomarker for the Diagnosis of Colorectal Cancer.","authors":"Łukasz Zadka, Adam Ustaszewski, Natalia Glatzel-Plucińska, Agnieszka Rusak, Izabela Łaczmańska, Katarzyna Ratajczak-Wielgomas, Alicja Kmiecik, Aleksandra Piotrowska, Katarzyna Haczkiewicz-Leśniak, Agnieszka Gomułkiewicz, Magdalena Kostrzewska-Poczekaj, Piotr Dzięgiel","doi":"10.3390/cancers16213665","DOIUrl":"10.3390/cancers16213665","url":null,"abstract":"<p><strong>Background/objectives: </strong>The aim of this study was to examine the expression of TYK2 in colorectal cancer (CRC) and to determine the potential diagnostic and prognostic significance of this kinase.</p><p><strong>Methods: </strong>Digital image analysis was performed to assess immunohistochemical TYK2 reactivity.</p><p><strong>Results: </strong>There were significant differences for all positive pixels between CRC and normal colonic mucosa, with higher TYK2 expression levels observed in surgical margins than in adenocarcinomas (<i>p</i> = 0.0004). Paired <i>t</i> tests showed elevated immunoreactivity for overall TYK2 expression in matched pairs of CRC with adjacent surgical margins (<i>p</i> < 0.0001). Higher percentages of weak (<i>p</i> < 0.0001) and strong pixels (<i>p</i> = 0.0260) were detected in normal colonic mucosa than in cancer tissues. To distinguish cancer from normal intestinal mucosa, the following cutoffs for the TYK2 immune score were found: 29.5% for all cases and 31% for matched pairs. Tumor budding (Bd) was negatively correlated with the percentage of strong pixels for TYK2 (ρ = -0.270, <i>p</i> = 0.0096). The percentage of strong pixels was significantly elevated for the T parameter (<i>p</i> = 0.0428). There was a positive correlation between the number of involved lymph nodes and weak pixels (ρ = 0.239, <i>p</i> = 0.0242). Immunofluorescence staining showed significantly higher signal intensities in colonic mucosa than in CRC. The protein level of TYK2 was significantly higher in controls than in cancer tissues. TEM imaging showed lower levels of TYK2 in cancer than in ulcerative colitis.</p><p><strong>Conclusions: </strong>TYK2 protein expression may bring diagnostic value in patients diagnosed with CRC.</p>","PeriodicalId":9681,"journal":{"name":"Cancers","volume":"16 21","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-10-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11545102/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142614278","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
G-Protein-Coupled Receptor-Associated Sorting Protein 1 Overexpression Is Involved in the Progression of Benign Prostatic Hyperplasia, Early-Stage Prostatic Malignant Diseases, and Prostate Cancer. G-蛋白偶联受体相关分拣蛋白 1 的过度表达与良性前列腺增生症、早期前列腺恶性疾病和前列腺癌的进展有关。
IF 4.5 2区 医学 Q1 ONCOLOGY Pub Date : 2024-10-30 DOI: 10.3390/cancers16213659
Cesar Torres-Luna, Shuanzeng Wei, Sreenivas Bhattiprolu, George Tuszynski, Vicki L Rothman, Declan McNulty, Jeff Yang, Frank N Chang

Background/Objectives: Prostate cancer (PCa) is a prevalent malignancy, necessitating accurate diagnostic methods to distinguish it from benign conditions such as benign prostatic hyperplasia (BPH). Current diagnostic tools, relying primarily on serum prostate-specific antigen (PSA) levels, lack specificity, leading to an over-diagnosis and unnecessary treatment of patients with benign conditions. This study explores G-protein-coupled receptor-associated sorting protein 1 (GASP-1) as a more sensitive biomarker for PCa detection. Methods: Prostate tissue microarrays of healthy, BPH, and prostate cancer patients with different Gleason scores were studied. Polyclonal antibodies targeted against GASP-1 were used for routine immunohistochemistry (IHC) and enzyme-linked immunosorbent assay (ELISA) analyses. Results: The results indicated a 5-fold difference in serum GASP-1 levels between BPH and PCa, which was validated through GASP-1 IHC. Furthermore, a novel scoring system, the H-score, assesses GASP-1 granules' intensity and size, revealing a clear distinction between BPH and PCa. An additional analysis of GASP-1 expression between PCa cases with different Gleason scores reveals that GASP-1 overexpression correlates with PCa severity, providing insights into disease progression. Conclusions: The study supports GASP-1's role as a promising diagnostic marker, supplementing PSA testing, and offering improved risk stratification for PCa. Additionally, an open-source software system is introduced for an efficient GASP-1 granule color analysis, enhancing diagnostic accuracy.

背景/目标:前列腺癌(PCa)是一种常见的恶性肿瘤,需要准确的诊断方法将其与良性前列腺增生(BPH)等良性疾病区分开来。目前的诊断工具主要依赖血清前列腺特异性抗原(PSA)水平,缺乏特异性,导致过度诊断和对良性患者进行不必要的治疗。本研究探索将 G 蛋白偶联受体相关分选蛋白 1(GASP-1)作为检测 PCa 的更灵敏的生物标志物。研究方法研究了健康、良性前列腺增生和不同格里森评分的前列腺癌患者的前列腺组织芯片。使用针对 GASP-1 的多克隆抗体进行常规免疫组织化学(IHC)和酶联免疫吸附试验(ELISA)分析。结果显示结果表明,良性前列腺增生症和 PCa 患者的血清 GASP-1 水平相差 5 倍,GASP-1 IHC 验证了这一点。此外,一种新的评分系统--H 评分--可评估 GASP-1 颗粒的强度和大小,从而明确区分良性前列腺增生症和 PCa。对不同 Gleason 评分的 PCa 病例之间的 GASP-1 表达进行的额外分析表明,GASP-1 的过表达与 PCa 的严重程度相关,这为了解疾病的进展提供了线索。结论:该研究支持将 GASP-1 作为一种有前途的诊断标记物,作为 PSA 检测的补充,并改善 PCa 的风险分层。此外,该研究还介绍了一种开源软件系统,可用于高效的 GASP-1 颗粒颜色分析,从而提高诊断的准确性。
{"title":"G-Protein-Coupled Receptor-Associated Sorting Protein 1 Overexpression Is Involved in the Progression of Benign Prostatic Hyperplasia, Early-Stage Prostatic Malignant Diseases, and Prostate Cancer.","authors":"Cesar Torres-Luna, Shuanzeng Wei, Sreenivas Bhattiprolu, George Tuszynski, Vicki L Rothman, Declan McNulty, Jeff Yang, Frank N Chang","doi":"10.3390/cancers16213659","DOIUrl":"10.3390/cancers16213659","url":null,"abstract":"<p><p><b>Background/Objectives:</b> Prostate cancer (PCa) is a prevalent malignancy, necessitating accurate diagnostic methods to distinguish it from benign conditions such as benign prostatic hyperplasia (BPH). Current diagnostic tools, relying primarily on serum prostate-specific antigen (PSA) levels, lack specificity, leading to an over-diagnosis and unnecessary treatment of patients with benign conditions. This study explores G-protein-coupled receptor-associated sorting protein 1 (GASP-1) as a more sensitive biomarker for PCa detection. <b>Methods:</b> Prostate tissue microarrays of healthy, BPH, and prostate cancer patients with different Gleason scores were studied. Polyclonal antibodies targeted against GASP-1 were used for routine immunohistochemistry (IHC) and enzyme-linked immunosorbent assay (ELISA) analyses. <b>Results:</b> The results indicated a 5-fold difference in serum GASP-1 levels between BPH and PCa, which was validated through GASP-1 IHC. Furthermore, a novel scoring system, the H-score, assesses GASP-1 granules' intensity and size, revealing a clear distinction between BPH and PCa. An additional analysis of GASP-1 expression between PCa cases with different Gleason scores reveals that GASP-1 overexpression correlates with PCa severity, providing insights into disease progression. <b>Conclusions</b>: The study supports GASP-1's role as a promising diagnostic marker, supplementing PSA testing, and offering improved risk stratification for PCa. Additionally, an open-source software system is introduced for an efficient GASP-1 granule color analysis, enhancing diagnostic accuracy.</p>","PeriodicalId":9681,"journal":{"name":"Cancers","volume":"16 21","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-10-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11544983/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142615689","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Design Principles and Applications of Fluorescent Kinase Inhibitors for Simultaneous Cancer Bioimaging and Therapy. 同时进行癌症生物成像和治疗的荧光激酶抑制剂的设计原理和应用。
IF 4.5 2区 医学 Q1 ONCOLOGY Pub Date : 2024-10-30 DOI: 10.3390/cancers16213667
Ab Majeed Ganai, Eirinaios I Vrettos, Stavroula G Kyrkou, Vasiliki Zoi, Tabasum Khan Pathan, Rajshekhar Karpoormath, Penelope Bouziotis, George A Alexiou, George A Kastis, Nicholas E Protonotarios, Andreas G Tzakos

Kinase inhibitors are potent therapeutic agents in cancer treatment, but their effectiveness is frequently restricted by the inability to image the tumor microenvironment. To address this constraint, kinase inhibitor-fluorophore conjugates have emerged as promising theranostic agents, allowing for simultaneous cancer diagnosis and treatment. These conjugates are gaining attention for their ability to visualize malignant tissues and concurrently enhance therapeutic interventions. This review explores the design principles governing the development of multimodal inhibitors, highlighting their potential as platforms for kinase tracking and inhibition via bioimaging. The structural aspects of constructing such theranostic agents are critically analyzed. This work could shed light on this intriguing field and provide adequate impetus for developing novel theranostic compounds based on small molecule inhibitors and fluorophores.

激酶抑制剂是治疗癌症的有效药物,但由于无法对肿瘤微环境进行成像,其有效性常常受到限制。为解决这一制约因素,激酶抑制剂-荧光团共轭物已成为一种很有前景的治疗药物,可同时进行癌症诊断和治疗。这些共轭物因其可视化恶性组织并同时加强治疗干预的能力而备受关注。本综述探讨了开发多模式抑制剂的设计原则,强调了它们作为通过生物成像追踪和抑制激酶平台的潜力。文章对构建此类治疗剂的结构方面进行了批判性分析。这项工作可以阐明这一引人入胜的领域,并为开发基于小分子抑制剂和荧光团的新型治疗化合物提供足够的动力。
{"title":"Design Principles and Applications of Fluorescent Kinase Inhibitors for Simultaneous Cancer Bioimaging and Therapy.","authors":"Ab Majeed Ganai, Eirinaios I Vrettos, Stavroula G Kyrkou, Vasiliki Zoi, Tabasum Khan Pathan, Rajshekhar Karpoormath, Penelope Bouziotis, George A Alexiou, George A Kastis, Nicholas E Protonotarios, Andreas G Tzakos","doi":"10.3390/cancers16213667","DOIUrl":"10.3390/cancers16213667","url":null,"abstract":"<p><p>Kinase inhibitors are potent therapeutic agents in cancer treatment, but their effectiveness is frequently restricted by the inability to image the tumor microenvironment. To address this constraint, kinase inhibitor-fluorophore conjugates have emerged as promising theranostic agents, allowing for simultaneous cancer diagnosis and treatment. These conjugates are gaining attention for their ability to visualize malignant tissues and concurrently enhance therapeutic interventions. This review explores the design principles governing the development of multimodal inhibitors, highlighting their potential as platforms for kinase tracking and inhibition via bioimaging. The structural aspects of constructing such theranostic agents are critically analyzed. This work could shed light on this intriguing field and provide adequate impetus for developing novel theranostic compounds based on small molecule inhibitors and fluorophores.</p>","PeriodicalId":9681,"journal":{"name":"Cancers","volume":"16 21","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-10-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11545566/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142615604","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Tumor-Associated Tractography Derived from High-Angular-Resolution Q-Space MRI May Predict Patterns of Cellular Invasion in Glioblastoma. 从高角分辨Q空间磁共振成像得出的肿瘤相关切迹图可预测胶质母细胞瘤的细胞侵袭模式
IF 4.5 2区 医学 Q1 ONCOLOGY Pub Date : 2024-10-30 DOI: 10.3390/cancers16213669
Owen P Leary, John P Zepecki, Mattia Pizzagalli, Steven A Toms, David D Liu, Yusuke Suita, Yao Ding, Jihong Wang, Renjie He, Caroline Chung, Clifton D Fuller, Jerrold L Boxerman, Nikos Tapinos, Richard J Gilbert

Background: The invasion of glioblastoma cells beyond the visible tumor margin depicted by conventional neuroimaging is believed to mediate recurrence and predict poor survival. Radiomic biomarkers that are associated with the direction and extent of tumor infiltration are, however, non-existent.

Methods: Patients from a single center with newly diagnosed glioblastoma (n = 7) underwent preoperative Q-space magnetic resonance imaging (QSI; 3T, 64 gradient directions, b = 1000 s/mm2) between 2018 and 2019. Tumors were manually segmented, and patterns of inter-voxel coherence spatially intersecting each segmentation were generated to represent tumor-associated tractography. One patient additionally underwent regional biopsy of diffusion tract- versus non-tract-associated tissue during tumor resection for RNA sequencing. Imaging data from this cohort were compared with a historical cohort of n = 66 glioblastoma patients who underwent similar QSI scans. Associations of tractography-derived metrics with survival were assessed using t-tests, linear regression, and Kaplan-Meier statistics. Patient-derived glioblastoma xenograft (PDX) mice generated with the sub-hippocampal injection of human-derived glioblastoma stem cells (GSCs) were scanned under high-field conditions (QSI, 7T, 512 gradient directions), and tumor-associated tractography was compared with the 3D microscopic reconstruction of immunostained GSCs.

Results: In the principal enrollment cohort of patients with glioblastoma, all cases displayed tractography patterns with tumor-intersecting tract bundles extending into brain parenchyma, a phenotype which was reproduced in PDX mice as well as in a larger comparison cohort of glioblastoma patients (n = 66), when applying similar methods. Reconstructed spatial patterns of GSCs in PDX mice closely mirrored tumor-associated tractography. On a Kaplan-Meier survival analysis of n = 66 patients, the calculated intra-tumoral mean diffusivity predicted the overall survival (p = 0.037), as did tractography-associated features including mean tract length (p = 0.039) and mean projecting tract length (p = 0.022). The RNA sequencing of human tissue samples (n = 13 tumor samples from a single patient) revealed the overexpression of transcripts which regulate cell motility in tract-associated samples.

Conclusions: QSI discriminates tumor-specific patterns of inter-voxel coherence believed to represent white matter pathways which may be susceptible to glioblastoma invasion. These findings may lay the groundwork for future work on therapeutic targeting, patient stratification, and prognosis in glioblastoma.

背景:胶质母细胞瘤细胞的侵袭超出了传统神经影像学所描述的可见肿瘤边缘,这被认为是导致复发和预示不良生存率的因素。然而,与肿瘤浸润方向和范围相关的放射生物标志物尚不存在:2018年至2019年期间,来自一个中心的新诊断胶质母细胞瘤患者(n = 7)接受了术前Q空间磁共振成像(QSI;3T,64个梯度方向,b = 1000 s/mm2)。对肿瘤进行了人工分割,并生成了与每个分割相交的体素间相干性空间模式,以表示肿瘤相关的牵引成像。一名患者还在肿瘤切除过程中接受了扩散束与非扩散束相关组织的区域活检,以进行 RNA 测序。该组患者的成像数据与接受过类似 QSI 扫描的 n = 66 例胶质母细胞瘤患者的历史数据进行了比较。使用 t 检验、线性回归和 Kaplan-Meier 统计法评估了牵引成像衍生指标与存活率的关系。在高场条件(QSI、7T、512个梯度方向)下扫描了海马下注射人源胶质母细胞瘤干细胞(GSCs)生成的患者源胶质母细胞瘤异种移植(PDX)小鼠,并将肿瘤相关牵引图与免疫染色GSCs的三维显微重建进行了比较:结果:在主要入组的胶质母细胞瘤患者中,所有病例都显示出肿瘤相交束束延伸至脑实质的牵引成像模式,应用类似方法时,这种表型在PDX小鼠和更大的胶质母细胞瘤患者对比组(n = 66)中得以重现。在PDX小鼠中重建的GSC空间模式与肿瘤相关束图密切相关。在对 n = 66 例患者进行的卡普兰-梅耶尔生存分析中,计算得出的瘤内平均弥散率预测了患者的总生存率(p = 0.037),牵引相关特征包括平均牵引长度(p = 0.039)和平均投影牵引长度(p = 0.022)也预测了患者的总生存率。人体组织样本(来自一名患者的 13 个肿瘤样本)的 RNA 测序显示,在牵引相关样本中,调控细胞运动的转录本过度表达:QSI能分辨出肿瘤特异性的象素间相干性模式,这种模式被认为代表了可能易受胶质母细胞瘤侵袭的白质通路。这些发现可为今后胶质母细胞瘤的靶向治疗、患者分层和预后判断奠定基础。
{"title":"Tumor-Associated Tractography Derived from High-Angular-Resolution Q-Space MRI May Predict Patterns of Cellular Invasion in Glioblastoma.","authors":"Owen P Leary, John P Zepecki, Mattia Pizzagalli, Steven A Toms, David D Liu, Yusuke Suita, Yao Ding, Jihong Wang, Renjie He, Caroline Chung, Clifton D Fuller, Jerrold L Boxerman, Nikos Tapinos, Richard J Gilbert","doi":"10.3390/cancers16213669","DOIUrl":"10.3390/cancers16213669","url":null,"abstract":"<p><strong>Background: </strong>The invasion of glioblastoma cells beyond the visible tumor margin depicted by conventional neuroimaging is believed to mediate recurrence and predict poor survival. Radiomic biomarkers that are associated with the direction and extent of tumor infiltration are, however, non-existent.</p><p><strong>Methods: </strong>Patients from a single center with newly diagnosed glioblastoma (<i>n</i> = 7) underwent preoperative Q-space magnetic resonance imaging (QSI; 3T, 64 gradient directions, b = 1000 s/mm<sup>2</sup>) between 2018 and 2019. Tumors were manually segmented, and patterns of inter-voxel coherence spatially intersecting each segmentation were generated to represent tumor-associated tractography. One patient additionally underwent regional biopsy of diffusion tract- versus non-tract-associated tissue during tumor resection for RNA sequencing. Imaging data from this cohort were compared with a historical cohort of <i>n</i> = 66 glioblastoma patients who underwent similar QSI scans. Associations of tractography-derived metrics with survival were assessed using <i>t</i>-tests, linear regression, and Kaplan-Meier statistics. Patient-derived glioblastoma xenograft (PDX) mice generated with the sub-hippocampal injection of human-derived glioblastoma stem cells (GSCs) were scanned under high-field conditions (QSI, 7T, 512 gradient directions), and tumor-associated tractography was compared with the 3D microscopic reconstruction of immunostained GSCs.</p><p><strong>Results: </strong>In the principal enrollment cohort of patients with glioblastoma, all cases displayed tractography patterns with tumor-intersecting tract bundles extending into brain parenchyma, a phenotype which was reproduced in PDX mice as well as in a larger comparison cohort of glioblastoma patients (<i>n</i> = 66), when applying similar methods. Reconstructed spatial patterns of GSCs in PDX mice closely mirrored tumor-associated tractography. On a Kaplan-Meier survival analysis of <i>n</i> = 66 patients, the calculated intra-tumoral mean diffusivity predicted the overall survival (<i>p</i> = 0.037), as did tractography-associated features including mean tract length (<i>p</i> = 0.039) and mean projecting tract length (<i>p</i> = 0.022). The RNA sequencing of human tissue samples (<i>n</i> = 13 tumor samples from a single patient) revealed the overexpression of transcripts which regulate cell motility in tract-associated samples.</p><p><strong>Conclusions: </strong>QSI discriminates tumor-specific patterns of inter-voxel coherence believed to represent white matter pathways which may be susceptible to glioblastoma invasion. These findings may lay the groundwork for future work on therapeutic targeting, patient stratification, and prognosis in glioblastoma.</p>","PeriodicalId":9681,"journal":{"name":"Cancers","volume":"16 21","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-10-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11544887/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142613651","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Automated Organ Segmentation for Radiation Therapy: A Comparative Analysis of AI-Based Tools Versus Manual Contouring in Korean Cancer Patients. 放射治疗中的自动器官分割:基于人工智能的工具与韩国癌症患者手动勾画轮廓的比较分析。
IF 4.5 2区 医学 Q1 ONCOLOGY Pub Date : 2024-10-30 DOI: 10.3390/cancers16213670
Seo Hee Choi, Jong Won Park, Yeona Cho, Gowoon Yang, Hong In Yoon

Background: Accurate delineation of tumors and organs at risk (OARs) is crucial for intensity-modulated radiation therapy. This study aimed to evaluate the performance of OncoStudio, an AI-based auto-segmentation tool developed for Korean patients, compared with Protégé AI, a globally developed tool that uses data from Korean cancer patients.

Methods: A retrospective analysis of 1200 Korean cancer patients treated with radiotherapy was conducted. Auto-contours generated via OncoStudio and Protégé AI were compared with manual contours across the head and neck and thoracic, abdominal, and pelvic organs. Accuracy was assessed using the Dice similarity coefficient (DSC), mean surface distance (MSD), and 95% Hausdorff distance (HD). Feedback was obtained from 10 participants, including radiation oncologists, residents, and radiation therapists, via an online survey with a Turing test component.

Results: OncoStudio outperformed Protégé AI in 85% of the evaluated OARs (p < 0.001). For head and neck organs, OncoStudio achieved a similar DSC (0.70 vs. 0.70, p = 0.637) but significantly lower MSD and 95% HD values (p < 0.001). In thoracic organs, OncoStudio performed excellently in 90% of cases, with a significantly greater DSC (male: 0.87 vs. 0.82, p < 0.001; female: 0.95 vs. 0.87, p < 0.001). OncoStudio also demonstrated superior accuracy in abdominal (DSC 0.88 vs. 0.81, p < 0.001) and pelvic organs (male: DSC 0.95 vs. 0.85, p < 0.001; female: DSC 0.82 vs. 0.73, p < 0.001). Clinicians favored OncoStudio in 70% of cases, with 90% endorsing its clinical suitability for Korean patients.

Conclusions: OncoStudio, which is tailored for Korean patients, demonstrated superior segmentation accuracy across multiple anatomical regions, suggesting its suitability for radiotherapy planning in this population.

背景:准确划分肿瘤和危险器官(OAR)对于调强放射治疗至关重要。本研究旨在评估为韩国患者开发的基于人工智能的自动分割工具 OncoStudio 与全球开发的使用韩国癌症患者数据的工具 Protégé AI 的性能比较:方法:对 1200 名接受放疗的韩国癌症患者进行了回顾性分析。将通过 OncoStudio 和 Protégé AI 生成的自动轮廓与头颈部、胸部、腹部和盆腔器官的手动轮廓进行了比较。准确度通过狄斯相似系数(DSC)、平均表面距离(MSD)和 95% 豪斯多夫距离(HD)进行评估。10 位参与者(包括放射肿瘤专家、住院医生和放射治疗师)通过带有图灵测试组件的在线调查提供了反馈意见:结果:在 85% 的评估 OAR 中,OncoStudio 的表现优于 Protégé AI(p < 0.001)。在头颈部器官方面,OncoStudio 的 DSC 值与 Protégé AI 相似(0.70 vs. 0.70,p = 0.637),但 MSD 值和 95% HD 值明显低于 Protégé AI(p < 0.001)。在胸部器官中,OncoStudio 在 90% 的病例中表现优异,DSC 明显更高(男性:0.87 对 0.82,p < 0.001;女性:0.95 对 0.87,p < 0.001)。OncoStudio 对腹部器官(DSC 0.88 对 0.81,p < 0.001)和盆腔器官(男性:DSC 0.95 对 0.85,p < 0.001;女性:DSC 0.82 对 0.73,p < 0.001)的准确性也更高。70%的病例受到临床医生的青睐,90%的病例认可其在韩国患者中的临床适用性:结论:专为韩国患者量身定制的OncoStudio在多个解剖区域显示出卓越的分割准确性,表明其适用于该人群的放疗计划。
{"title":"Automated Organ Segmentation for Radiation Therapy: A Comparative Analysis of AI-Based Tools Versus Manual Contouring in Korean Cancer Patients.","authors":"Seo Hee Choi, Jong Won Park, Yeona Cho, Gowoon Yang, Hong In Yoon","doi":"10.3390/cancers16213670","DOIUrl":"10.3390/cancers16213670","url":null,"abstract":"<p><strong>Background: </strong>Accurate delineation of tumors and organs at risk (OARs) is crucial for intensity-modulated radiation therapy. This study aimed to evaluate the performance of OncoStudio, an AI-based auto-segmentation tool developed for Korean patients, compared with Protégé AI, a globally developed tool that uses data from Korean cancer patients.</p><p><strong>Methods: </strong>A retrospective analysis of 1200 Korean cancer patients treated with radiotherapy was conducted. Auto-contours generated via OncoStudio and Protégé AI were compared with manual contours across the head and neck and thoracic, abdominal, and pelvic organs. Accuracy was assessed using the Dice similarity coefficient (DSC), mean surface distance (MSD), and 95% Hausdorff distance (HD). Feedback was obtained from 10 participants, including radiation oncologists, residents, and radiation therapists, via an online survey with a Turing test component.</p><p><strong>Results: </strong>OncoStudio outperformed Protégé AI in 85% of the evaluated OARs (<i>p</i> < 0.001). For head and neck organs, OncoStudio achieved a similar DSC (0.70 vs. 0.70, <i>p</i> = 0.637) but significantly lower MSD and 95% HD values (<i>p</i> < 0.001). In thoracic organs, OncoStudio performed excellently in 90% of cases, with a significantly greater DSC (male: 0.87 vs. 0.82, <i>p</i> < 0.001; female: 0.95 vs. 0.87, <i>p</i> < 0.001). OncoStudio also demonstrated superior accuracy in abdominal (DSC 0.88 vs. 0.81, <i>p</i> < 0.001) and pelvic organs (male: DSC 0.95 vs. 0.85, <i>p</i> < 0.001; female: DSC 0.82 vs. 0.73, <i>p</i> < 0.001). Clinicians favored OncoStudio in 70% of cases, with 90% endorsing its clinical suitability for Korean patients.</p><p><strong>Conclusions: </strong>OncoStudio, which is tailored for Korean patients, demonstrated superior segmentation accuracy across multiple anatomical regions, suggesting its suitability for radiotherapy planning in this population.</p>","PeriodicalId":9681,"journal":{"name":"Cancers","volume":"16 21","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-10-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11544936/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142615442","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evolving Artificial Intelligence (AI) at the Crossroads: Potentiating Productive vs. Declining Disruptive Cancer Research. 处于十字路口的不断发展的人工智能(AI):癌症研究的生产性潜能与破坏性衰退。
IF 4.5 2区 医学 Q1 ONCOLOGY Pub Date : 2024-10-29 DOI: 10.3390/cancers16213646
Nilesh Kumar Sharma, Sachin C Sarode

Artificial intelligence (AI), encompassing several tools and platforms such as artificial "general" intelligence (AGI) and generative artificial intelligence (GenAI), has facilitated cancer research, enhancing productivity in terms of research publications and translational value for cancer patients. AGI tools, such as ChatGPT, assist preclinical and clinical scientists in identifying tumor heterogeneity, predicting therapy outcomes, and streamlining research publications. However, this perspective review also explores the potential of AI's influence on cancer research with regard to its impact on disruptive sciences and discoveries by preclinical and clinical scientists. The increasing reliance on AI tools may compromise biological intelligence, disrupting abstraction, creativity, and critical thinking. This could contribute to the declining trend of disruptive sciences, hindering landmark discoveries and innovations. This perspective review narrates the role of different forms of AI in the potentiation of productive cancer research and the potential disruption of disruptive sciences due to AI's influence.

人工智能(AI)包括多种工具和平台,如人工 "通用 "智能(AGI)和生成式人工智能(GenAI),它促进了癌症研究,提高了研究出版物的生产率和对癌症患者的转化价值。ChatGPT 等 AGI 工具可帮助临床前和临床科学家识别肿瘤异质性、预测治疗结果并简化研究论文的发表。不过,本视角综述还探讨了人工智能对癌症研究的潜在影响,即其对颠覆性科学以及临床前和临床科学家的发现的影响。对人工智能工具的日益依赖可能会损害生物智能,破坏抽象性、创造性和批判性思维。这可能会导致颠覆性科学的衰退趋势,阻碍具有里程碑意义的发现和创新。本视角综述阐述了不同形式的人工智能在促进富有成效的癌症研究中的作用,以及人工智能的影响可能对颠覆性科学造成的破坏。
{"title":"Evolving Artificial Intelligence (AI) at the Crossroads: Potentiating Productive vs. Declining Disruptive Cancer Research.","authors":"Nilesh Kumar Sharma, Sachin C Sarode","doi":"10.3390/cancers16213646","DOIUrl":"10.3390/cancers16213646","url":null,"abstract":"<p><p>Artificial intelligence (AI), encompassing several tools and platforms such as artificial \"general\" intelligence (AGI) and generative artificial intelligence (GenAI), has facilitated cancer research, enhancing productivity in terms of research publications and translational value for cancer patients. AGI tools, such as ChatGPT, assist preclinical and clinical scientists in identifying tumor heterogeneity, predicting therapy outcomes, and streamlining research publications. However, this perspective review also explores the potential of AI's influence on cancer research with regard to its impact on disruptive sciences and discoveries by preclinical and clinical scientists. The increasing reliance on AI tools may compromise biological intelligence, disrupting abstraction, creativity, and critical thinking. This could contribute to the declining trend of disruptive sciences, hindering landmark discoveries and innovations. This perspective review narrates the role of different forms of AI in the potentiation of productive cancer research and the potential disruption of disruptive sciences due to AI's influence.</p>","PeriodicalId":9681,"journal":{"name":"Cancers","volume":"16 21","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11544874/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142615651","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Evidence Base for Circulating Tumor DNA-Methylation in Non-Small Cell Lung Cancer: A Systematic Review and Meta-Analysis. 非小细胞肺癌循环肿瘤 DNA 甲基化的证据基础:系统回顾与元分析》。
IF 4.5 2区 医学 Q1 ONCOLOGY Pub Date : 2024-10-29 DOI: 10.3390/cancers16213641
Debora Maffeo, Angela Rina, Viola Bianca Serio, Athina Markou, Tomasz Powrózek, Vera Constâncio, Sandra P Nunes, Carmen Jerónimo, Alfonso Calvo, Francesca Mari, Elisa Frullanti, Diletta Rosati, Maria Palmieri

Background: Non-Small Cell Lung Cancer (NSCLC) remains a challenging disease to manage with effectiveness. Early detection and precise monitoring are crucial for improving patient outcomes. Circulating tumor DNA (ctDNA) offers a non-invasive cancer detection and monitoring method. Emerging biomarkers, such as ctDNA methylation, have shown promise in enhancing diagnostic accuracy and prognostic assessment in NSCLC. In this review, we examined the current evidence regarding ctDNA methylation's role in NSCLC detection through a systematic review of the existing literature and meta-analysis. Methods: We systematically searched PubMed, Medline, Embase, and Web of Science databases up to 26 June 2024 for studies on the role of ctDNA methylation analysis in NSCLC patients. We included studies from 2010 to 2024 on NSCLC patients. We excluded case reports, non-English articles, studies on cell lines or artificial samples, those without cfDNA detection, prognostic studies, and studies with non-extractable data or mixed cancer types. Funnel plots were visually examined for potential publication bias, with a p value < 0.05 indicating bias. Meta-analysis was conducted using R packages (meta, forestplot, and mada). Combined sensitivity, specificity, positive likelihood ratio (LR+), negative likelihood ratio (LR-), positive and negative predictive values, diagnostic odds ratio (DOR), and 95% confidence intervals (95% CI) were calculated. A summary receiver operating characteristic curve (SROC) and area under the curve (AUC) with related Standard Error (SE) were used to evaluate the overall diagnostic performance. Additionally, RASSF1A, APC, SOX17, SEPT9, and RARβ2 were analyzed, since their methylation was assessed in two or more studies. Results: From 38 candidate papers, we finally identified 12 studies, including 472 NSCLC patients. The pooled sensitivity was 0.62 (0.47-0.77) and the specificity was 0.90 (0.85-0.94). The diagnostic odds ratio was 15.6 (95% CI 9.36-26.09) and the area under the curve was 0.249 (SE = 0.138). The positive and negative predictive values were 5.38 (95% CI 3.89-7.44) and 0.34 (95% CI 0.22-0.54), respectively. For single genes, the specificity reached 0.83~0.96, except for RARβ2, but the sensitivity was relatively low for each gene. Significant heterogeneity across the included studies, the potential publication bias for specificity (p = 0.0231), and the need to validate the clinical utility of ctDNA methylation for monitoring treatment response and predicting outcomes in NSCLC patients represent the main limitations of this study. Conclusions: These results provide evidence of the significant potential of ctDNA methylation as a valuable biomarker for improving the diagnosis of NSCLC, advocating for its integration into clinical practice to enhance patient management.

背景:非小细胞肺癌(NSCLC非小细胞肺癌(NSCLC)仍然是一种难以有效控制的疾病。早期检测和精确监测对改善患者预后至关重要。循环肿瘤 DNA(ctDNA)提供了一种非侵入性癌症检测和监测方法。ctDNA甲基化等新兴生物标志物有望提高NSCLC的诊断准确性和预后评估。在这篇综述中,我们通过对现有文献的系统综述和荟萃分析,研究了有关ctDNA甲基化在NSCLC检测中作用的现有证据。研究方法我们系统检索了截至 2024 年 6 月 26 日的 PubMed、Medline、Embase 和 Web of Science 数据库中有关ctDNA 甲基化分析在 NSCLC 患者中作用的研究。我们纳入了 2010 年至 2024 年有关 NSCLC 患者的研究。我们排除了病例报告、非英文文章、细胞系或人工样本研究、未检测 cfDNA 的研究、预后研究以及无法提取数据或混合癌症类型的研究。对漏斗图进行直观检查,以确定是否存在潜在的发表偏倚,P 值小于 0.05 则表明存在偏倚。使用 R 软件包(meta、forestplot 和 mada)进行 Meta 分析。计算了综合灵敏度、特异性、阳性似然比(LR+)、阴性似然比(LR-)、阳性和阴性预测值、诊断几率比(DOR)和 95% 置信区间(95% CI)。受试者操作特征曲线(SROC)和曲线下面积(AUC)及相关标准误差(SE)用于评估总体诊断性能。此外,还对 RASSF1A、APC、SOX17、SEPT9 和 RARβ2 进行了分析,因为它们的甲基化在两项或多项研究中进行了评估。结果从 38 篇候选论文中,我们最终确定了 12 项研究,包括 472 名 NSCLC 患者。汇总灵敏度为 0.62(0.47-0.77),特异性为 0.90(0.85-0.94)。诊断几率比为 15.6(95% CI 9.36-26.09),曲线下面积为 0.249(SE = 0.138)。阳性和阴性预测值分别为 5.38(95% CI 3.89-7.44)和 0.34(95% CI 0.22-0.54)。除 RARβ2 外,单个基因的特异性达到 0.83~0.96,但每个基因的敏感性相对较低。本研究的主要局限性包括:纳入研究之间存在显著异质性、特异性可能存在发表偏倚(p = 0.0231),以及需要验证ctDNA甲基化在监测NSCLC患者治疗反应和预测预后方面的临床实用性。结论这些结果证明了ctDNA甲基化作为一种有价值的生物标记物在改善NSCLC诊断方面的巨大潜力,并倡导将其纳入临床实践以加强对患者的管理。
{"title":"The Evidence Base for Circulating Tumor DNA-Methylation in Non-Small Cell Lung Cancer: A Systematic Review and Meta-Analysis.","authors":"Debora Maffeo, Angela Rina, Viola Bianca Serio, Athina Markou, Tomasz Powrózek, Vera Constâncio, Sandra P Nunes, Carmen Jerónimo, Alfonso Calvo, Francesca Mari, Elisa Frullanti, Diletta Rosati, Maria Palmieri","doi":"10.3390/cancers16213641","DOIUrl":"10.3390/cancers16213641","url":null,"abstract":"<p><p><i>Background</i>: Non-Small Cell Lung Cancer (NSCLC) remains a challenging disease to manage with effectiveness. Early detection and precise monitoring are crucial for improving patient outcomes. Circulating tumor DNA (ctDNA) offers a non-invasive cancer detection and monitoring method. Emerging biomarkers, such as ctDNA methylation, have shown promise in enhancing diagnostic accuracy and prognostic assessment in NSCLC. In this review, we examined the current evidence regarding ctDNA methylation's role in NSCLC detection through a systematic review of the existing literature and meta-analysis. <i>Methods</i>: We systematically searched PubMed, Medline, Embase, and Web of Science databases up to 26 June 2024 for studies on the role of ctDNA methylation analysis in NSCLC patients. We included studies from 2010 to 2024 on NSCLC patients. We excluded case reports, non-English articles, studies on cell lines or artificial samples, those without cfDNA detection, prognostic studies, and studies with non-extractable data or mixed cancer types. Funnel plots were visually examined for potential publication bias, with a <i>p</i> value < 0.05 indicating bias. Meta-analysis was conducted using R packages (meta, forestplot, and mada). Combined sensitivity, specificity, positive likelihood ratio (LR+), negative likelihood ratio (LR-), positive and negative predictive values, diagnostic odds ratio (DOR), and 95% confidence intervals (95% CI) were calculated. A summary receiver operating characteristic curve (SROC) and area under the curve (AUC) with related Standard Error (SE) were used to evaluate the overall diagnostic performance. Additionally, <i>RASSF1A</i>, <i>APC</i>, <i>SOX17</i>, <i>SEPT9,</i> and <i>RARβ2</i> were analyzed, since their methylation was assessed in two or more studies. <i>Results</i>: From 38 candidate papers, we finally identified 12 studies, including 472 NSCLC patients. The pooled sensitivity was 0.62 (0.47-0.77) and the specificity was 0.90 (0.85-0.94). The diagnostic odds ratio was 15.6 (95% CI 9.36-26.09) and the area under the curve was 0.249 (SE = 0.138). The positive and negative predictive values were 5.38 (95% CI 3.89-7.44) and 0.34 (95% CI 0.22-0.54), respectively. For single genes, the specificity reached 0.83~0.96, except for <i>RARβ2</i>, but the sensitivity was relatively low for each gene. Significant heterogeneity across the included studies, the potential publication bias for specificity (<i>p</i> = 0.0231), and the need to validate the clinical utility of ctDNA methylation for monitoring treatment response and predicting outcomes in NSCLC patients represent the main limitations of this study. <i>Conclusions:</i> These results provide evidence of the significant potential of ctDNA methylation as a valuable biomarker for improving the diagnosis of NSCLC, advocating for its integration into clinical practice to enhance patient management.</p>","PeriodicalId":9681,"journal":{"name":"Cancers","volume":"16 21","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11544801/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142615746","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Histology Agnostic Drug Development: An Updated Review. 与组织学无关的药物开发:最新综述。
IF 4.5 2区 医学 Q1 ONCOLOGY Pub Date : 2024-10-29 DOI: 10.3390/cancers16213642
Kevin Nguyen, Karina Fama, Guadalupe Mercado, Yin Myat, Kyaw Thein

Recent advancements in oncology have led to the development of histology-agnostic therapies, which target genetic alterations irrespective of the tumor's tissue of origin. This review aimed to provide a comprehensive update on the current state of histology-agnostic drug development, focusing on key therapies, including pembrolizumab, larotrectinib, entrectinib, dostarlimab, dabrafenib plus trametinib, selpercatinib, trastuzumab deruxtecan, and reprotrectinib. We performed a detailed analysis of each therapy's mechanism of action, clinical trial outcomes, and associated biomarkers. The review further explores challenges in drug resistance, such as adaptive signaling pathways and neoantigen variability, as well as diagnostic limitations in identifying optimal patient populations. While these therapies have demonstrated efficacy in various malignancies, significant hurdles remain, including intratumoral heterogeneity and resistance mechanisms that diminish treatment effectiveness. We propose considerations for refining trial designs and emerging biomarkers, such as tumor neoantigen burden, to enhance patient selection. These findings illustrate the transformative potential of histology-agnostic therapies in precision oncology but highlight the need for continued research to optimize their use and overcome existing barriers.

肿瘤学的最新进展推动了组织学诊断疗法的发展,这种疗法不考虑肿瘤的原发组织,而是以基因改变为靶点。本综述旨在全面更新组织学诊断药物的开发现状,重点关注主要疗法,包括pembrolizumab、larotrectinib、entrectinib、dostarlimab、dabrafenib plus trametinib、selpercatinib、曲妥珠单抗deruxtecan和reprotrectinib。我们对每种疗法的作用机制、临床试验结果和相关生物标记物进行了详细分析。综述进一步探讨了耐药性方面的挑战,如适应性信号通路和新抗原的可变性,以及在确定最佳患者人群方面的诊断局限性。虽然这些疗法已在各种恶性肿瘤中显示出疗效,但仍存在重大障碍,包括肿瘤内异质性和降低治疗效果的耐药机制。我们提出了完善试验设计和新兴生物标志物(如肿瘤新抗原负荷)的注意事项,以加强对患者的选择。这些发现说明了组织学诊断疗法在精准肿瘤学中的变革潜力,但也强调了继续研究以优化其使用并克服现有障碍的必要性。
{"title":"Histology Agnostic Drug Development: An Updated Review.","authors":"Kevin Nguyen, Karina Fama, Guadalupe Mercado, Yin Myat, Kyaw Thein","doi":"10.3390/cancers16213642","DOIUrl":"10.3390/cancers16213642","url":null,"abstract":"<p><p>Recent advancements in oncology have led to the development of histology-agnostic therapies, which target genetic alterations irrespective of the tumor's tissue of origin. This review aimed to provide a comprehensive update on the current state of histology-agnostic drug development, focusing on key therapies, including pembrolizumab, larotrectinib, entrectinib, dostarlimab, dabrafenib plus trametinib, selpercatinib, trastuzumab deruxtecan, and reprotrectinib. We performed a detailed analysis of each therapy's mechanism of action, clinical trial outcomes, and associated biomarkers. The review further explores challenges in drug resistance, such as adaptive signaling pathways and neoantigen variability, as well as diagnostic limitations in identifying optimal patient populations. While these therapies have demonstrated efficacy in various malignancies, significant hurdles remain, including intratumoral heterogeneity and resistance mechanisms that diminish treatment effectiveness. We propose considerations for refining trial designs and emerging biomarkers, such as tumor neoantigen burden, to enhance patient selection. These findings illustrate the transformative potential of histology-agnostic therapies in precision oncology but highlight the need for continued research to optimize their use and overcome existing barriers.</p>","PeriodicalId":9681,"journal":{"name":"Cancers","volume":"16 21","pages":""},"PeriodicalIF":4.5,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11544807/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142615710","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Cancers
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1