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IF 3.3 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-08-01 DOI: 10.1016/S1355-8145(24)00111-1
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引用次数: 0
Unraveling the intricacies of cold-inducible RNA-binding protein: A comprehensive review 揭示冷诱导 RNA 结合蛋白的复杂性:全面回顾。
IF 3.3 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-07-03 DOI: 10.1016/j.cstres.2024.07.001

Cold-inducible RNA-binding protein (CIRP) is a versatile RNA-binding protein, pivotal in modulating cellular responses to diverse stress stimuli including cold shock, ultraviolet radiation, hypoxia, and infections, with a principal emphasis on cold stress. The temperature range of 32–34 °C is most suitable for CIRP expression. The human CIRP is an 18–21 kDa polypeptide containing 172 amino acids coded by a gene located on chromosome 19p13.3. CIRP has an RNA-recognition motif (RRM) and an arginine-rich motif (RGG), both of which have roles in coordinating numerous cellular activities. CIRP itself also undergoes conformational changes in response to diverse environmental stress. Transcription factors such as hypoxia-inducible factor 1 alpha and nuclear factor-kappa B have been implicated in coordinating CIRP transcription in response to specific stimuli. The potential of CIRP to relocate from the nucleus to the cytoplasm upon exposure to different stimuli enhances its varied functional roles across different cellular compartments. The different functions include decreasing nutritional demand, apoptosis suppression, modulation of translation, and preservation of cytoskeletal integrity at lower temperatures. This review explores the diverse functions and regulatory mechanisms of CIRP, shedding light on its involvement in various cellular processes and its implications for human health and disease.

冷诱导 RNA 结合蛋白(CIRP)是一种多功能的 RNA 结合蛋白,在调节细胞对冷休克、紫外线辐射、缺氧和感染等各种应激刺激的反应中起着关键作用,主要作用于冷应激。32-34°C 的温度范围最适合 CIRP 的表达。人类 CIRP 是一种 18-21kDa 的多肽,含有 172 个氨基酸,由位于染色体 19p13.3 上的基因编码。CIRP 有一个 RNA 识别基序(RRM)和一个富含精氨酸的基序(RGG),这两个基序在协调多种细胞活动中发挥作用。CIRP 本身也会在各种环境压力下发生构象变化。缺氧诱导因子 1 alpha(HIF-1α)和核因子-kappa B(NF-κB)等转录因子与协调 CIRP 在特定刺激下的转录有关。在受到不同刺激时,CIRP 有可能从细胞核转移到细胞质,这增强了它在不同细胞区的不同功能作用。不同的功能包括降低营养需求、抑制细胞凋亡、调节翻译以及在较低温度下保持细胞骨架的完整性。这篇综述探讨了 CIRP 的各种功能和调控机制,揭示了它在各种细胞过程中的参与及其对人类健康和疾病的影响。
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引用次数: 0
Genome-wide DNA methylation profiles regulate distinct heat stress response in zebu (Bos indicus) and crossbred (Bos indicus × Bos taurus) cattle 全基因组 DNA 甲基化图谱调控斑马牛(Bos indicus)和杂交牛(Bos indicus X Bos taurus)不同的热应激反应。
IF 3.3 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-06-25 DOI: 10.1016/j.cstres.2024.06.005
Basavaraj Sajjanar , Mohd Tanzeel Aalam , Owais Khan , Sujoy K Dhara , Jyotirmoy Ghosh , Ravi Kumar Gandham , Praveen K Gupta , Pallab Chaudhuri , Triveni Dutt , Gyanendra Singh , Bishnu Prasad Mishra

Epigenetic variations result from long-term adaptation to environmental factors. The Bos indicus (zebu) adapted to tropical conditions, whereas Bos taurus adapted to temperate conditions; hence native zebu cattle and its crossbred (B indicus × B taurus) show differences in responses to heat stress. The present study evaluated genome-wide DNA methylation profiles of these two breeds of cattle that may explain distinct heat stress responses. Physiological responses to heat stress and estimated values of Iberia heat tolerance coefficient and Benezra's coefficient of adaptability revealed better relative thermotolerance of Hariana compared to the Vrindavani cattle. Genome-wide DNA methylation patterns were different for Hariana and Vrindavani cattle. The comparison between breeds indicated the presence of 4599 significant differentially methylated CpGs with 756 hypermethylated and 3845 hypomethylated in Hariana compared to the Vrindavani cattle. Further, we found 79 genes that showed both differential methylation and differential expression that are involved in cellular stress response functions. Differential methylations in the microRNA coding sequences also revealed their functions in heat stress responses. Taken together, epigenetic differences represent the potential regulation of long-term adaptation of Hariana (B indicus) cattle to the tropical environment and relative thermotolerance.

表观遗传变异源于对环境因素的长期适应。斑马牛(Bos indicus)适应热带环境,而牛适应温带环境,因此本地斑马牛及其杂交品种(B indicus X B taurus)对热应激的反应存在差异。本研究评估了这两个牛种的全基因组 DNA 甲基化图谱,这可能解释了不同的热应激反应。对热应激的生理反应以及伊比利亚耐热系数(HTC)和贝内兹拉适应性系数(BCA)的估计值表明,与弗林达瓦尼牛相比,哈里亚纳牛的相对耐热性更好。哈里亚纳牛和弗林达瓦尼牛的全基因组 DNA 甲基化模式不同。品种间的比较表明,Hariana 牛与 Vrindavani 牛相比,存在 4599 个显著的差异甲基化 CpGs(DMC),其中 756 个为高甲基化,3845 个为低甲基化。此外,我们还发现有 79 个基因同时表现出不同的甲基化和不同的表达,这些基因涉及细胞应激反应功能。微小核糖核酸(microRNA)编码序列的甲基化差异也揭示了它们在热应激反应中的功能。综上所述,表观遗传学差异代表了哈里亚纳牛(B indicus)对热带环境和相对耐热性的长胚期适应性的潜在调控。
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引用次数: 0
The influence of HSP inducers on salinity stress in sterlet sturgeon (Acipenser ruthenus): In vitro study on HSP expression, immune responses, and antioxidant capacity HSP诱导剂对鲟鱼(Acipenser ruthenus)盐度胁迫的影响:关于HSP表达、免疫反应和抗氧化能力的体外研究。
IF 3.3 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-06-22 DOI: 10.1016/j.cstres.2024.06.004
Sevda Zarei , Hossein Ghafouri , Leila Vahdatiraad , Behrooz Heidari

Heat shock proteins (HSPs) play a crucial role in antioxidant systems, immune responses, and enzyme activation during stress conditions. Salinity changes can cause stress and energy expenditure in fish, resulting in mortality, especially in fingerlings. The purpose of this study was to examine the relationship between salinity and HSPs in stressed fish by assessing the effects of various HSP inducers (HSPis), including Pro-Tex® (800 mM), amygdalin (80 mM), and a novel synthetic compound derived from pirano piranazole (80 µM), on isolated cells from Sterlet Sturgeon (Acipenser ruthenus) exposed to 13 ‰ salinity (S13). After liver, kidney, and gill cells were cultured, the HSPi compounds were treated in vitro in the presence and absence of salinity. The expression patterns of HSP27, HSP70, and HSP90 were assessed by Western blotting. Biochemical enzymes (aspartate aminotransferase, alanine aminotransferase, alkaline phosphatase, and lactate dehydrogenase), cortisol levels, and immune parameters (component 3, immunoglobulin M, and lysozyme) were measured before and after treatment with HSPis and HSPi + S13. According to these findings, HSPis positively modulate HSP expression, immune responses, and antioxidant levels. Furthermore, they increased in vitro cell survival by maintaining cortisol levels and biochemical enzyme activities in A. ruthenus under saline conditions (P < 0.0001). In conclusion, HSPis can increase A. ruthenus resistance to salinity stress. However, the results also indicated that these compounds can reverse the adverse effects of salinity. The effectiveness of this approach depends on further research into the effects of these ecological factors on the health status of the species, especially in vivo and in combination with other stresses.

热休克蛋白(HSPs)在应激条件下的抗氧化系统、免疫反应和酶活化中发挥着至关重要的作用。盐度变化会导致鱼类应激和能量消耗,造成死亡,尤其是幼鱼。本研究的目的是通过评估各种 HSP 诱导剂(HSPis),包括 Pro-Tex® (800mM)、杏仁苷 (80mM) 和一种从 pirano piranazole 提取的新型合成化合物 (80µM),对暴露在 13‰ 盐度(S13)下的鲟鱼(Acipenser ruthenus)离体细胞的影响,来研究盐度与应激鱼体内 HSPs 之间的关系。培养肝脏、肾脏和鳃细胞后,在有盐度和无盐度条件下对 HSPi 复合物进行体外处理。用 Western 印迹法评估 HSP27、HSP70 和 HSP90 的表达模式。在使用 HSPis 和 HSPi + S13 处理前后测量了生化酶(AST、ALT、ALP 和 LDH)、皮质醇水平和免疫参数(C3、IgM 和 LYZ)。根据这些研究结果,HSPis 能积极调节 HSP 表达、免疫反应和抗氧化剂水平。此外,在生理盐水条件下,HSPis 还能维持芦竹的皮质醇水平和生化酶活性,从而提高体外细胞存活率(P ˂ 0.0001)。总之,HSPis 能增强芦竹对盐胁迫的抵抗力。不过,研究结果也表明,这些化合物可以逆转盐度的不利影响。这种方法的有效性取决于进一步研究这些生态因素对物种健康状况的影响,特别是在体内以及与其他胁迫结合时的影响。
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引用次数: 0
Genome-wide identification of the HSP70 genes in Pacific oyster Magallana gigas and their response to heat stress 在全基因组范围内鉴定太平洋牡蛎中的 HSP70 基因及其对热应激的反应。
IF 3.3 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-06-21 DOI: 10.1016/j.cstres.2024.06.002
Hongbo Lu , Chang Liu , Chuanyan Yang , Zhaoyu He , Lingling Wang , Linsheng Song

Heat shock protein 70 (HSP70), the most prominent and well-characterized stress protein in animals, plays an important role in assisting animals in responding to various adverse conditions. In the present study, a total of 113 HSP70 gene family members were identified in the updated genome of Magallana gigas (designated MgHSP70) (previously known as Crassostrea gigas). There were 75, 12, 11, and 8 HSP70s located in the cytoplasm, nucleus, mitochondria, and endoplasmic reticulum, respectively, and 7 HSP70s were located in both the nucleus and cytoplasm. Among 113 MgHSP70 genes, 107 were unevenly distributed in 8 chromosomes of M. gigas with the greatest number in chromosome 07 (61 genes, 57.01%). The MgHSP70 gene family members were mainly assigned into five clusters, among which the HSPa12 subfamily underwent lineage-specific expansion, consisting of 89 members. A total of 68 MgHSP70 genes (60.18%) were tandemly duplicated and formed 30 gene pairs, among which 14 gene pairs were under strong positive selection. In general, the expression of MgHSP70s was tissue-specific, with the highest expression in labial palp and gill and the lowest expression in adductor muscle and hemocytes. There were 35, 31, and 47 significantly upregulated genes at 6, 12, and 24 h after heat shock treatment (28 °C), respectively. The expression patterns of different tandemly duplicated genes exhibited distinct characteristics after shock treatment, indicating that these genes may have different functions. Nevertheless, genes within the same tandemly duplicated group exhibit similar expression patterns. Most of the tandemly duplicated HSP70 gene pairs showed the highest expression levels at 24 h. This study provides a comprehensive description of the MgHSP70 gene family in M. gigas and offers valuable insights into the functions of HSP70 in the mollusc adaptation of oysters to environmental stress.

热休克蛋白 70(HSP70)是动物体内最重要的应激蛋白,在协助动物应对各种不利条件方面发挥着重要作用。本研究在更新后的千头鳕(Magallana gigas)基因组中发现了 113 个 HSP70 基因家族成员(命名为 MgHSP70)(以前称为千头鳕)。分别有 75 个、12 个、11 个和 8 个 HSP70 位于细胞质、细胞核、线粒体和内质网中,有 7 个 HSP70 同时位于细胞核和细胞质中。在113个MgHSP70基因中,有107个基因不均匀地分布在千足虫的8条染色体上,其中以07号染色体上的基因数最多(61个,占57.01%)。MgHSP70基因家族成员主要分为5个群组,其中HSPa12亚家族发生了特异性扩增,由89个成员组成。共有 68 个 MgHSP70 基因(占 60.18%)串联重复,形成 30 个基因对,其中 14 个基因对处于强正向选择状态。一般来说,MgHSP70s的表达具有组织特异性,在唇掌和鳃中表达最高,在内收肌和血细胞中表达最低。热休克处理(28 °C)后6、12和24小时,分别有35、31和47个基因明显上调。不同串联重复基因的表达模式在热应激后表现出不同的特征,表明这些基因可能具有不同的功能。然而,同一串联重复组中的基因表现出相似的表达模式。大多数串联重复的 HSP70 基因对在 24 小时内表现出最高的表达水平。本研究全面描述了千岛牡蛎的 MgHSP70 基因家族,并为了解 HSP70 在牡蛎对环境压力的软体适应中的功能提供了有价值的见解。
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引用次数: 0
Biochemical characterization of ClpB and DnaK from Anaplasma phagocytophilum 噬噬原虫 ClpB 和 DnaK 的生化特征。
IF 3.3 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-06-20 DOI: 10.1016/j.cstres.2024.06.003
Chathurange B. Ranaweera , Sunitha Shiva , Swetha Madesh , Deepika Chauhan , Roman R. Ganta , Michal Zolkiewski

Anaplasma phagocytophilum is an intracellular tick-transmitted bacterial pathogen that infects neutrophils in mammals and causes granulocytic anaplasmosis. In this study, we investigated the molecular chaperones ClpB and DnaK from A. phagocytophilum. In Escherichia coli, ClpB cooperates with DnaK and its co-chaperones DnaJ and GrpE in ATP-dependent reactivation of aggregated proteins. Since ClpB is not produced in metazoans, it is a promising target for developing antimicrobial therapies, which generates interest in studies on that chaperone’s role in pathogenic bacteria. We found that ClpB and DnaK are transcriptionally upregulated in A. phagocytophilum 3–5 days after infection of human HL-60 and tick ISE6 cells, which suggests an essential role of the chaperones in supporting the pathogen’s intracellular life cycle. Multiple sequence alignments show that A. phagocytophilum ClpB and DnaK contain all structural domains that were identified in their previously studied orthologs from other bacteria. Both A. phagocytophilum ClpB and DnaK display ATPase activity, which is consistent with their participation in the ATP-dependent protein disaggregation system. However, despite a significant sequence similarity between the chaperones from A. phagocytophilum and those from E. coli, the former were not as effective as their E. coli orthologs during reactivation of aggregated proteins in vitro and in supporting the survival of E. coli cells under heat stress. We conclude that the A. phagocytophilum chaperones might have evolved with distinct biochemical properties to maintain the integrity of pathogenic proteins under unique stress conditions of an intracellular environment of host cells.

噬细胞无形体(Anaplasma phagocytophilum)是一种细胞内蜱传细菌病原体,会感染哺乳动物的中性粒细胞并导致粒细胞无形体病。在这项研究中,我们研究了噬吞噬细胞嗜血杆菌的分子伴侣 ClpB 和 DnaK。在大肠杆菌中,ClpB 与 DnaK 及其辅助伴侣 DnaJ 和 GrpE 合作,在 ATP 依赖性条件下重新激活聚集蛋白。由于ClpB不在类人猿体内产生,因此它是开发抗菌疗法的一个有希望的目标,这引起了人们对该伴侣在病原菌中作用的研究兴趣。我们发现,噬细胞噬甲虫在感染人类 HL-60 细胞和蜱 ISE6 细胞 3-5 天后,ClpB 和 DnaK 转录上调,这表明伴侣蛋白在支持病原体的细胞内生命周期中发挥着重要作用。多重序列比对结果表明,噬细胞甲虫 ClpB 和 DnaK 含有之前研究的其他细菌同源物中发现的所有结构域。噬菌体 ClpB 和 DnaK 都具有 ATP 酶活性,这与它们参与 ATP 依赖性蛋白质分解系统是一致的。然而,尽管噬噬甲虫的伴侣蛋白与大肠杆菌的伴侣蛋白在序列上有很大的相似性,但前者在体外重新激活聚集蛋白和支持大肠杆菌细胞在热应激下存活的效果却不如大肠杆菌的同源物。我们的结论是,噬噬甲虫伴侣蛋白可能具有独特的生化特性,能在宿主细胞内环境的独特应激条件下维持致病蛋白的完整性。
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引用次数: 0
Mild heat shock at 40 °C increases levels of autophagy: Role of Nrf2 40ºC 的轻度热休克可提高自噬水平:Nrf2 的作用。
IF 3.3 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-06-14 DOI: 10.1016/j.cstres.2024.06.001
Mélanie Grondin, Claire Chabrol, Diana A. Averill-Bates

The exposure to low doses of stress induces an adaptive survival response that involves the upregulation of cellular defense systems such as heat shock proteins (Hsps), anti-apoptosis proteins, and antioxidants. Exposure of cells to elevated, non-lethal temperatures (39–41 °C) is an adaptive survival response known as thermotolerance, which protects cells against subsequent lethal stress such as heat shock (>41.5 °C). However, the initiating factors in this adaptive survival response are not understood. This study aims to determine whether autophagy can be activated by heat shock at 40 °C and if this response is mediated by the transcription factor Nrf2. Thermotolerant cells, which were developed during 3 h at 40 °C, were resistant to caspase activation at 42 °C. Autophagy was activated when cells were heated from 5 to 60 min at 40 °C. Levels of acidic vesicular organelles (AVOs) and autophagy proteins Beclin-1, LC3-II/LC3-I, Atg7, Atg5, Atg12–Atg5, and p62 were increased. When Nrf2 was overexpressed or depleted in cells, levels of AVOs and autophagy proteins were higher in unstressed cells, compared to the wild type. Stress induced by mild heat shock at 40 °C further increased levels of most autophagy proteins in cells with overexpression or depletion of Nrf2. Colocalization of p62 and Keap1 occurred. When Nrf2 levels are low, activation of autophagy would likely compensate as a defense mechanism to protect cells against stress. An improved understanding of autophagy in the context of cellular responses to physiological heat shock could be useful for cancer treatment by hyperthermia and the protective role of adaptive responses against environmental stresses.

暴露于低剂量的应激会诱发一种适应性生存反应,其中涉及热休克蛋白(Hsp)、抗凋亡蛋白和抗氧化剂等细胞防御系统的上调。将细胞暴露于非致命的高温(39-41°C)是一种适应性生存反应,被称为耐热性,可保护细胞免受随后的致命应激,如热休克(>41.5°C)。然而,这种适应性生存反应的启动因素尚不清楚。本研究旨在确定自噬是否能被40°C的热休克激活,以及这种反应是否由转录因子Nrf2介导。耐热细胞在40°C条件下生长3小时,在42°C条件下对caspase激活具有抵抗力。当细胞在40°C下加热5至60分钟时,自噬被激活。酸性囊泡细胞器(AVO)和自噬蛋白Beclin-1、LC3-II/LC3-I、Atg7、Atg5、Atg12-Atg5和p62的水平均升高。与野生型相比,当细胞中的Nrf2被过表达或耗竭时,未受压细胞中的AVOs和自噬蛋白水平较高。40ºC轻度热休克诱导的应激进一步提高了Nrf2过表达或缺失细胞中大多数自噬蛋白的水平。p62和Keap1发生了共定位。当Nrf2水平较低时,自噬的激活很可能会作为一种防御机制来保护细胞免受压力。进一步了解细胞对生理性热休克的反应中的自噬现象,对通过热疗治疗癌症以及对环境压力的适应性反应的保护作用很有帮助。
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引用次数: 0
An update on the status of HSP90 inhibitors in cancer clinical trials HSP90 抑制剂在癌症临床试验中的最新进展。
IF 3.3 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-06-13 DOI: 10.1016/j.cstres.2024.05.005
Shraddha Rastogi , Abhinav Joshi , Nahoko Sato , Sunmin Lee , Min-Jung Lee , Jane B. Trepel , Len Neckers

The evolutionary conserved molecular chaperone heat shock protein 90 (HSP90) plays an indispensable role in tumorigenesis by stabilizing client oncoproteins. Although the functionality of HSP90 is tightly regulated, cancer cells exhibit a unique dependence on this chaperone, leading to its overexpression, which has been associated with poor prognosis in certain malignancies. While various strategies targeting heat shock proteins (HSPs) involved in carcinogenesis have been explored, only inhibition of HSP90 has consistently and effectively resulted in proteasomal degradation of its client proteins. To date, a total of 22 HSP90 inhibitors (HSP90i) have been tested in 186 cancer clinical trials, as reported by clinicaltrials.gov. Among these trials, 60 % have been completed, 10 % are currently active, and 30 % have been suspended, terminated, or withdrawn. HSP90 inhibitors (HSP90i) have been used as single agents or in combination with other drugs for the treatment of various cancer types in clinical trials. Notably, improved clinical outcomes have been observed when HSP90i are used in combination therapies, as they exhibit a synergistic antitumor effect. However, as single agents, HSP90i have shown limited clinical activity due to drug-related toxicity or therapy resistance. Recently, active trials conducted in Japan evaluating TAS-116 (pimitespib) have demonstrated promising results with low toxicity as monotherapy and in combination with the immune checkpoint inhibitor nivolumab. Exploratory biomarker analyses performed in various trials have demonstrated target engagement that suggests the potential for identifying patient populations that may respond favorably to the therapy. In this review, we discuss the advances made in the past 5 years regarding HSP90i and their implications in anticancer therapeutics. Our focus lies in evaluating drug efficacy, prognosis forecast, pharmacodynamic biomarkers, and clinical outcomes reported in published trials. Through this comprehensive review, we aim to shed light on the progress and potential of HSP90i as promising therapeutic agents in cancer treatment.

进化保守的分子伴侣 HSP90 通过稳定客户癌蛋白,在肿瘤发生过程中发挥着不可或缺的作用。虽然 HSP90 的功能受到严格调控,但癌细胞对这种伴侣蛋白表现出独特的依赖性,导致其过度表达,这与某些恶性肿瘤的不良预后有关。虽然针对与致癌有关的热休克蛋白的各种策略已被探索过,但只有抑制 HSP90 才能持续有效地导致其客户蛋白的蛋白酶体降解。根据 clinicaltrials.gov 的报告,迄今为止,共有 22 种 HSP90 抑制剂在 186 项癌症临床试验中接受了测试。在这些试验中,60%已经完成,10%正在进行中,30%已经暂停、终止或撤销。在临床试验中,HSP90 抑制剂被用作单药或与其他药物联用治疗各种癌症类型。值得注意的是,由于 HSP90 抑制剂具有协同抗肿瘤作用,因此在联合疗法中使用 HSP90 抑制剂可改善临床疗效。然而,作为单药,HSP90 抑制剂因药物相关毒性或耐药性而显示出有限的临床活性。最近,日本对 TAS-116(pimitespib)进行了积极的试验评估,结果表明该药作为单药或与免疫检查点抑制剂 nivolumab 联用时毒性低,前景看好。各种试验中进行的探索性生物标志物分析表明,靶点参与表明有可能识别出对疗法有良好反应的患者群体。在本综述中,我们将讨论过去五年中有关 HSP90 抑制剂的研究进展及其对抗癌疗法的影响。我们的重点在于评估药物疗效、预后预测、药效生物标志物以及已发表试验报告的临床结果。通过这篇全面的综述,我们希望阐明 HSP90 抑制剂在癌症治疗中的进展和潜力。
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引用次数: 0
Editorial Board Members/Copyright 编委会成员/版权
IF 3.8 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-06-01 DOI: 10.1016/S1355-8145(24)00104-4
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引用次数: 0
Cover and caption 封面和标题
IF 3.8 3区 生物学 Q3 CELL BIOLOGY Pub Date : 2024-06-01 DOI: 10.1016/S1355-8145(24)00103-2
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引用次数: 0
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Cell Stress & Chaperones
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