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Correction: lncRNA THAP7-AS1, transcriptionally activated by SP1 and post-transcriptionally stabilized by METTL3-mediated m6A modification, exerts oncogenic properties by improving CUL4B entry into the nucleus 更正:lncRNA THAP7-AS1由SP1转录激活,转录后由METTL3介导的m6A修饰稳定,通过改善CUL4B进入细胞核发挥致癌特性。
IF 13.7 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-09 DOI: 10.1038/s41418-024-01335-0
Hai-Ting Liu, Yong-Xin Zou, Wen-jie Zhu,  Sen-Liu, Guo-hao Zhang, Ran-Ran Ma, Xiang-yu Guo, Peng Gao
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引用次数: 0
TFEB controls syncytiotrophoblast formation and hormone production in placenta TFEB 控制胎盘中合胞滋养细胞的形成和激素分泌
IF 13.7 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-07-04 DOI: 10.1038/s41418-024-01337-y
Marcella Cesana, Gennaro Tufano, Francesco Panariello, Nicolina Zampelli, Chiara Soldati, Margherita Mutarelli, Sandro Montefusco, Giuseppina Grieco, Lucia Vittoria Sepe, Barbara Rossi, Edoardo Nusco, Giada Rossignoli, Giorgia Panebianco, Fabrizio Merciai, Emanuela Salviati, Eduardo Maria Sommella, Pietro Campiglia, Graziano Martello, Davide Cacchiarelli, Diego Luis Medina, Andrea Ballabio
TFEB, a bHLH-leucine zipper transcription factor belonging to the MiT/TFE family, globally modulates cell metabolism by regulating autophagy and lysosomal functions. Remarkably, loss of TFEB in mice causes embryonic lethality due to severe defects in placentation associated with aberrant vascularization and resulting hypoxia. However, the molecular mechanism underlying this phenotype has remained elusive. By integrating in vivo analyses with multi-omics approaches and functional assays, we have uncovered an unprecedented function for TFEB in promoting the formation of a functional syncytiotrophoblast in the placenta. Our findings demonstrate that constitutive loss of TFEB in knock-out mice is associated with defective formation of the syncytiotrophoblast layer. Indeed, using in vitro models of syncytialization, we demonstrated that TFEB translocates into the nucleus during syncytiotrophoblast formation and binds to the promoters of crucial placental genes, including genes encoding fusogenic proteins (Syncytin-1 and Syncytin-2) and enzymes involved in steroidogenic pathways, such as CYP19A1, the rate-limiting enzyme for the synthesis of 17β-Estradiol (E2). Conversely, TFEB depletion impairs both syncytial fusion and endocrine properties of syncytiotrophoblast, as demonstrated by a significant decrease in the secretion of placental hormones and E2 production. Notably, restoration of TFEB expression resets syncytiotrophoblast identity. Our findings identify that TFEB controls placental development and function by orchestrating both the transcriptional program underlying trophoblast fusion and the acquisition of endocrine function, which are crucial for the bioenergetic requirements of embryonic development.
TFEB是一种属于MiT/TFE家族的bHLH-亮氨酸拉链转录因子,通过调节自噬和溶酶体功能在全球范围内调节细胞代谢。值得注意的是,小鼠体内 TFEB 的缺失会导致胚胎死亡,这是由于胎盘的严重缺陷与异常血管化和由此导致的缺氧有关。然而,这种表型背后的分子机制仍然难以捉摸。通过将体内分析与多组学方法和功能测定相结合,我们发现了 TFEB 在促进胎盘中功能性合胞滋养细胞形成方面前所未有的功能。我们的研究结果表明,基因敲除小鼠中 TFEB 的组成性缺失与合胞滋养层的缺陷形成有关。事实上,我们利用体外合胞化模型证明,TFEB 在合胞滋养细胞形成过程中会转位到细胞核中,并与关键胎盘基因的启动子结合,这些基因包括编码合胞化蛋白(Syncytin-1 和 Syncytin-2)的基因和参与类固醇生成途径的酶,如 CYP19A1,它是合成 17β 雌二醇(E2)的限速酶。相反,TFEB 的缺失会损害合胞滋养细胞的合胞融合和内分泌特性,表现为胎盘激素的分泌和 E2 的产生显著减少。值得注意的是,恢复 TFEB 的表达可重置合胞滋养细胞的特性。我们的研究结果表明,TFEB 通过协调滋养细胞融合的转录程序和内分泌功能的获得来控制胎盘的发育和功能,这对于胚胎发育的生物能量需求至关重要。
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引用次数: 0
TRIM65 deficiency alleviates renal fibrosis through NUDT21-mediated alternative polyadenylation TRIM65的缺乏可通过NUDT21介导的替代多腺苷酸化减轻肾脏纤维化。
IF 13.7 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-29 DOI: 10.1038/s41418-024-01336-z
Sisi Wei, Xuan Huang, Qing Zhu, Tao Chen, Yan Zhang, Juan Tian, Tingyu Pan, Lv Zhang, Tao Xie, Qi Zhang, Xian Kuang, Enjun Lei, Yong Li
Chronic kidney disease (CKD) is a major global health concern and the third leading cause of premature death. Renal fibrosis is the primary process driving the progression of CKD, but the mechanisms behind it are not fully understood, making treatment options limited. Here, we find that the E3 ligase TRIM65 is a positive regulator of renal fibrosis. Deletion of TRIM65 results in a reduction of pathological lesions and renal fibrosis in mouse models of kidney fibrosis induced by unilateral ureteral obstruction (UUO)- and folic acid. Through screening with a yeast-hybrid system, we identify a new interactor of TRIM65, the mammalian cleavage factor I subunit CFIm25 (NUDT21), which plays a crucial role in fibrosis through alternative polyadenylation (APA). TRIM65 interacts with NUDT21 to induce K48-linked polyubiquitination of lysine 56 and proteasomal degradation, leading to the inhibition of TGF-β1-mediated SMAD and ERK1/2 signaling pathways. The degradation of NUDT21 subsequently altered the length and sequence content of the 3′UTR (3′UTR-APA) of several pro-fibrotic genes including Col1a1, Fn-1, Tgfbr1, Wnt5a, and Fzd2. Furthermore, reducing NUDT21 expression via hydrodynamic renal pelvis injection of adeno-associated virus 9 (AAV9) exacerbated UUO-induced renal fibrosis in the normal mouse kidneys and blocked the protective effect of TRIM65 deletion. These findings suggest that TRIM65 promotes renal fibrosis by regulating NUDT21-mediated APA and highlight TRIM65 as a potential target for reducing renal fibrosis in CKD patients.
慢性肾脏病(CKD)是全球关注的主要健康问题,也是导致过早死亡的第三大原因。肾脏纤维化是推动 CKD 进展的主要过程,但其背后的机制尚未完全明了,因此治疗方案有限。在这里,我们发现 E3 连接酶 TRIM65 是肾脏纤维化的正向调节因子。在单侧输尿管梗阻(UUO)和叶酸诱导的肾脏纤维化小鼠模型中,TRIM65的缺失会导致病理病变和肾脏纤维化的减少。通过酵母杂交系统的筛选,我们发现了TRIM65的一个新的互作因子--哺乳动物裂解因子I亚基CFIm25(NUDT21),它通过替代多腺苷酸化(APA)在肾脏纤维化中发挥关键作用。TRIM65 与 NUDT21 相互作用,诱导赖氨酸 56 的 K48 链接多泛素化和蛋白酶体降解,从而抑制 TGF-β1 介导的 SMAD 和 ERK1/2 信号通路。NUDT21 的降解随后改变了几个促纤维化基因(包括 Col1a1、Fn-1、Tgfbr1、Wnt5a 和 Fzd2)3'UTR(3'UTR-APA)的长度和序列内容。此外,通过肾盂水动力注射腺相关病毒9(AAV9)减少NUDT21的表达会加剧UUO诱导的正常小鼠肾脏纤维化,并阻断TRIM65缺失的保护作用。这些研究结果表明,TRIM65通过调节NUDT21介导的APA促进肾脏纤维化,并强调TRIM65是减轻慢性肾脏病患者肾脏纤维化的潜在靶点。
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引用次数: 0
Determinants of p53 DNA binding, gene regulation, and cell fate decisions p53 DNA 结合、基因调控和细胞命运决定的决定因素。
IF 13.7 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-29 DOI: 10.1038/s41418-024-01326-1
Martin Fischer, Morgan A. Sammons
The extent to which transcription factors read and respond to specific information content within short DNA sequences remains an important question that the tumor suppressor p53 is helping us answer. We discuss recent insights into how local information content at p53 binding sites might control modes of p53 target gene activation and cell fate decisions. Significant prior work has yielded data supporting two potential models of how p53 determines cell fate through its target genes: a selective target gene binding and activation model and a p53 level threshold model. Both of these models largely revolve around an analogy of whether p53 is acting in a “smart” or “dumb” manner. Here, we synthesize recent and past studies on p53 decoding of DNA sequence, chromatin context, and cellular signaling cascades to elicit variable cell fates critical in human development, homeostasis, and disease.
转录因子在多大程度上读取并响应短 DNA 序列中的特定信息内容仍然是一个重要问题,肿瘤抑制因子 p53 正在帮助我们回答这个问题。我们将讨论最近对 p53 结合位点的局部信息内容如何控制 p53 靶基因激活模式和细胞命运决定的见解。关于 p53 如何通过其靶基因决定细胞命运,之前的大量工作已经产生了支持两种潜在模型的数据:选择性靶基因结合和激活模型以及 p53 水平阈值模型。这两种模式在很大程度上都围绕着一个类比,即 p53 是以 "聪明 "还是 "愚蠢 "的方式发挥作用。在此,我们综合了最近和过去有关 p53 对 DNA 序列、染色质环境和细胞信号级联进行解码以诱导对人类发育、稳态和疾病至关重要的可变细胞命运的研究。
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引用次数: 0
FRMD6 determines the cell fate towards senescence: involvement of the Hippo-YAP-CCN3 axis FRMD6 决定细胞走向衰老的命运:Hippo-YAP-CN3 轴的参与
IF 13.7 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-26 DOI: 10.1038/s41418-024-01333-2
Jung-Jin Park, Su Jin Lee, Minwoo Baek, Ok-Jun Lee, Seungyoon Nam, Jaehong Kim, Jin Young Kim, Eun-Young Shin, Eung-Gook Kim
Cellular senescence, a hallmark of aging, is pathogenically linked to the development of aging-related diseases. This study demonstrates that FRMD6, an upstream component of the Hippo/YAP signaling cascade, is a key regulator of senescence. Proteomic analysis revealed that FRMD6 is upregulated in senescent IMR90 fibroblasts under various senescence-inducing conditions. Silencing FRMD6 mitigated the senescence of IMR90 cells, suggesting its requirement in senescence. Conversely, the overexpression of FRMD6 alone induced senescence in cells and in lung tissue, establishing a causal link. The elevated FRMD6 levels correlated well with increased levels of the inhibitory phosphorylated YAP/TAZ. We identified cellular communication network factor 3 (CCN3), a key component of the senescence-associated secretory phenotype regulated by YAP, whose administration attenuated FRMD6-induced senescence in a dose-dependent manner. Mechanistically, FRMD6 interacted with and activated MST kinase, which led to YAP/TAZ inactivation. The expression of FRMD6 was regulated by the p53 and SMAD transcription factors in senescent cells. Accordingly, the expression of FRMD6 was upregulated by TGF-β treatment that activates those transcription factors. In TGF-β-treated IMR90 cells, FRMD6 mainly segregated with p21, a senescence marker, but rarely segregated with α-SMA, a myofibroblast marker, which suggests that FRMD6 has a role in directing cells towards senescence. Similarly, in TGF-β-enriched environments, such as fibroblastic foci (FF) from patients with idiopathic pulmonary fibrosis, FRMD6 co-localized with p16 in FF lining cells, while it was rarely detected in α-SMA-positive myofibroblasts that are abundant in FF. In sum, this study identifies FRMD6 as a novel regulator of senescence and elucidates the contribution of the FRMD6-Hippo/YAP-CCN3 axis to senescence.
细胞衰老是衰老的标志之一,与衰老相关疾病的发生有着病理联系。本研究证明,Hippo/YAP 信号级联的上游成分 FRMD6 是衰老的关键调控因子。蛋白质组分析表明,在各种衰老诱导条件下,衰老的 IMR90 成纤维细胞中 FRMD6 上调。沉默 FRMD6 可减轻 IMR90 细胞的衰老,这表明衰老过程中需要 FRMD6。相反,单独过表达 FRMD6 会诱导细胞和肺组织衰老,从而建立了因果关系。FRMD6 水平的升高与抑制性磷酸化 YAP/TAZ 水平的升高密切相关。我们发现了细胞通讯网络因子 3 (CCN3),它是由 YAP 调控的衰老相关分泌表型的一个关键成分,服用 CCN3 能以剂量依赖的方式减轻 FRMD6 诱导的衰老。从机理上讲,FRMD6 与 MST 激酶相互作用并激活 MST 激酶,从而导致 YAP/TAZ 失活。衰老细胞中 FRMD6 的表达受 p53 和 SMAD 转录因子的调控。因此,激活这些转录因子的 TGF-β 处理会上调 FRMD6 的表达。在经 TGF-β 处理的 IMR90 细胞中,FRMD6 主要与衰老标记 p21 分离,但很少与肌成纤维细胞标记 α-SMA 分离,这表明 FRMD6 在引导细胞走向衰老方面发挥作用。同样,在TGF-β富集的环境中,如特发性肺纤维化患者的成纤维细胞灶(FF),FRMD6与FF内衬细胞中的p16共定位,而在FF中大量存在的α-SMA阳性成肌细胞中却很少检测到FRMD6。总之,本研究确定了 FRMD6 是衰老的新型调控因子,并阐明了 FRMD6-Hippo/YAP-CCN3 轴对衰老的贡献。
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引用次数: 0
E3 ubiquitin ligase TRIM31 alleviates dopaminergic neurodegeneration by promoting proteasomal degradation of VDAC1 in Parkinson’s Disease model E3泛素连接酶TRIM31通过促进帕金森病模型中VDAC1的蛋白酶体降解来缓解多巴胺能神经退行性病变
IF 13.7 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-25 DOI: 10.1038/s41418-024-01334-1
Ze Zhao, Xiaomeng Song, Yimeng Wang, Lu Yu, Gan Huang, Yiquan Li, Runzhe Zong, Tengfei Liu, Qiuran Ji, Yi Zheng, Bingyu Liu, Qingfen Zhu, Lin Chen, Chengjiang Gao, Huiqing Liu
Mitochondrial dysfunction plays a pivotal role in the pathogenesis of Parkinson’s disease (PD). As a mitochondrial governor, voltage-dependent anion channel 1 (VDAC1) is critical for cell survival and death signals and implicated in neurodegenerative diseases. However, the mechanisms of VDAC1 regulation are poorly understood and the role of tripartite motif-containing protein 31 (TRIM31), an E3 ubiquitin ligase which is enriched in mitochondria, in PD remains unclear. In this study, we found that TRIM31−/− mice developed age associated motor defects and dopaminergic (DA) neurodegeneration spontaneously. In addition, TRIM31 was markedly reduced both in nigrostriatal region of PD mice induced by MPTP and in SH-SY5Y cells stimulated by MPP+. TRIM31 deficiency significantly aggravated DA neurotoxicity induced by MPTP. Mechanistically, TRIM31 interacted with VDAC1 and catalyzed the K48-linked polyubiquitination to degrade it through its E3 ubiquitin ligase activity. In conclusion, we demonstrated for the first time that TRIM31 served as an important regulator in DA neuronal homeostasis by facilitating VDAC1 degradation through the ubiquitin-proteasome pathway. Our study identified TRIM31 as a novel potential therapeutic target and pharmaceutical intervention to the interaction between TRIM31 and VDAC1 may provide a promising strategy for PD.
线粒体功能障碍在帕金森病(PD)的发病机制中起着关键作用。作为线粒体调控因子,电压依赖性阴离子通道 1(VDAC1)对细胞存活和死亡信号至关重要,并与神经退行性疾病有关。然而,人们对 VDAC1 的调控机制知之甚少,而线粒体中富含的 E3 泛素连接酶--含三方基序蛋白 31(TRIM31)在帕金森病中的作用仍不清楚。在这项研究中,我们发现 TRIM31-/- 小鼠会自发出现与年龄相关的运动缺陷和多巴胺能(DA)神经变性。此外,TRIM31在MPTP诱导的PD小鼠黑质区域和MPP+刺激的SH-SY5Y细胞中均显著减少。TRIM31缺乏会明显加重MPTP诱导的DA神经毒性。从机理上讲,TRIM31与VDAC1相互作用,并通过其E3泛素连接酶活性催化K48连接的多泛素化,从而降解VDAC1。总之,我们首次证明了TRIM31通过泛素蛋白酶体途径促进VDAC1降解,从而成为DA神经元稳态的重要调节因子。我们的研究发现,TRIM31是一个新的潜在治疗靶点,对TRIM31和VDAC1之间的相互作用进行药物干预可能会为治疗帕金森病提供一种有前景的策略。
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引用次数: 0
Disrupting CCDC137-mediated LZTS2 and β-TrCP interaction in the nucleus inhibits hepatocellular carcinoma development via β-catenin and AKT 破坏 CCDC137 在细胞核中介导的 LZTS2 和 β-TrCP 相互作用可通过 β-catenin 和 AKT 抑制肝细胞癌的发展
IF 12.4 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-25 DOI: 10.1038/s41418-024-01328-z
Lei Xu, Qiumeng Liu, Hailing Liu, Feimu Fan, Pengcheng Li, Shiwei Yue, Jie Mo, Zhicheng Liu, Renshun Dong, Xuewu Zhang, Hanhua Dong, Huifang Liang, Xiaoping Chen, Bixiang Zhang, Lin Chen, Jin Chen

Hepatocellular carcinoma (HCC) is a highly heterogeneous solid tumor, with its biological characteristics intricately linked to the activation of oncogenes. This research specifically explored CCDC137, a molecule within the CCDC family exhibiting the closest association with HCC. Our investigation aimed to unravel the role, underlying mechanisms, and potential therapeutic implications of CCDC137 in the context of HCC. We observed a close correlation between elevated CCDC137 expression and poor prognosis in HCC patients, along with a promotive effect on HCC progression in vitro and in vivo. Mechanistically, we identified LZTS2, a negative regulator of β-catenin, as the binding protein of CCDC137. CCDC137 facilitated K48-linked poly-ubiquitination of LZTS2 at lysine 467 via recruiting E3 ubiquitin ligase β-TrCP in the nucleus, triggering AKT phosphorylation and activation of β-catenin pathway. Moreover, the 1-75 domain of CCDC137 was responsible for the formation of the CCDC137-LZTS2-β-TrCP complex. Subsequently, designed peptides targeting the 1-75 domain of CCDC137 to disrupt CCDC137-LZTS2 interaction demonstrated efficacy in inhibiting HCC progression. This promising outcome was further supported by HCC organoids and patient-derived xenograft (PDX) models, underscoring the potential clinical utility of the peptides. This study elucidated the mechanism of the CCDC137-LZTS2-β-TrCP protein complex in HCC and offered clinically significant therapeutic strategies targeting this complex.

肝细胞癌(HCC)是一种高度异质性的实体肿瘤,其生物学特征与癌基因的活化密切相关。本研究特别探讨了 CCDC137,这是 CCDC 家族中与 HCC 关系最密切的一个分子。我们的研究旨在揭示 CCDC137 在 HCC 中的作用、内在机制和潜在治疗意义。我们观察到 CCDC137 表达的升高与 HCC 患者的不良预后密切相关,并在体外和体内对 HCC 的进展有促进作用。从机理上讲,我们发现 LZTS2(β-catenin 的负调控因子)是 CCDC137 的结合蛋白。CCDC137通过在细胞核中招募E3泛素连接酶β-TrCP,促进K48连接的LZTS2在赖氨酸467处的多泛素化,从而引发AKT磷酸化并激活β-catenin通路。此外,CCDC137的1-75结构域还负责形成CCDC137-LZTS2-β-TrCP复合物。随后,针对 CCDC137 的 1-75 结构域设计的多肽破坏了 CCDC137-LZTS2 的相互作用,在抑制 HCC 进展方面取得了疗效。HCC器官组织和患者异种移植(PDX)模型进一步证实了这一令人鼓舞的结果,凸显了多肽的潜在临床用途。这项研究阐明了CCDC137-LZTS2-β-TrCP蛋白复合物在HCC中的作用机制,并提供了针对该复合物的具有临床意义的治疗策略。
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引用次数: 0
The m6A methyltransferase METTL3 drives neuroinflammation and neurotoxicity through stabilizing BATF mRNA in microglia. m6A甲基转移酶METTL3通过稳定小胶质细胞中的BATF mRNA驱动神经炎症和神经毒性。
IF 13.7 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-20 DOI: 10.1038/s41418-024-01329-y
Xun Wu, Haixiao Liu, Jin Wang, Shenghao Zhang, Qing Hu, Tinghao Wang, Wenxing Cui, Yingwu Shi, Hao Bai, Jinpeng Zhou, Liying Han, Leiyang Li, Tianzhi Zhao, Yang Wu, Jianing Luo, Dayun Feng, Wei Guo, Shunnan Ge, Yan Qu

Persistent neuroinflammation and progressive neuronal loss are defining features of acute brain injury including traumatic brain injury (TBI) and cerebral stroke. Microglia, the most abundant type of brain-resident immune cells, continuously surveil the environment and play a central role in shaping the inflammatory state of the central nervous system (CNS). In the study, we discovered that the protein expression of METTL3 (a m6A methyltransferase) was upregulated in inflammatory microglia independent of increased Mettl3 gene transcription following TBI in both human and mouse subjects. Subsequently, we identified TRIP12, a HECT-domain E3 ubiquitin ligase, as a negative regulator of METTL3 protein expression by facilitating METTL3 K48-linked polyubiquitination. Importantly, selective ablation of Mettl3 inhibited microglial pathogenic activities, diminished neutrophil infiltration, rescued neuronal loss and facilitated functional recovery post-TBI. Using MeRIP-seq and CUT&Tag sequencing, we identified that METTL3 promoted the expression of Basic Leucine Zipper Transcriptional Factor ATF-Like (BATF), which in turn directly bound to a cohort of characteristic inflammatory cytokines and chemokine genes. Enhanced activities of BATF in microglia elicited TNF-dependent neurotoxicity and can also promote neutrophil recruitment through releasing CXCL2. Pharmacological inhibition of METTL3 using a BBB-penetrating drug-loaded nano-system showed satisfactory therapeutic effects in both TBI and stroke mouse models. Collectively, our findings identified METTL3-m6A-BATF axis as a potential therapeutic target for terminating detrimental neuroinflammation and progressive neuronal loss following acute brain injury. METTL3 protein is significantly up-regulated in inflammatory microglia due to the decreased proteasomal degradation mediated by TRIP12 and ERK-USP5 pathways. METTL3 stabilized BATF mRNA stability and promoted BATF expression through the m6A-IGF2BP2-dependent mechanism. Elevated expression of BATF elicits a pro-inflammatory gene program in microglia, and aggravates neuroinflammatory response including local immune responses and peripheral immune cell infiltration. Genetic deletion or pharmaceutically targeting METTL3-BATF axis suppressed microglial pro-inflammatory activities and promoted neurological recovery following TBI and stroke.

持续的神经炎症和进行性神经元损失是包括创伤性脑损伤(TBI)和脑卒中在内的急性脑损伤的显著特征。小胶质细胞是脑驻留免疫细胞中数量最多的一种,它们不断监测周围环境,在中枢神经系统(CNS)炎症状态的形成过程中发挥着核心作用。在这项研究中,我们发现在人和小鼠受到创伤性脑损伤后,炎性小胶质细胞中 METTL3(一种 m6A 甲基转移酶)的蛋白表达上调,而与 Mettl3 基因转录增加无关。随后,我们确定了 TRIP12(一种 HECT 域 E3 泛素连接酶)通过促进 METTL3 K48 链接的多泛素化而成为 METTL3 蛋白表达的负调控因子。重要的是,选择性消减Mettl3可抑制小胶质细胞的致病活动,减少中性粒细胞浸润,挽救神经元损失并促进创伤后功能恢复。通过 MeRIP-seq 和 CUT&Tag 测序,我们发现 METTL3 促进了碱性亮氨酸拉链转录因子 ATF-Like (BATF)的表达,而 BATF 又直接与一系列特征性炎症细胞因子和趋化因子基因结合。小胶质细胞中 BATF 活性的增强会诱发 TNF 依赖性神经毒性,还能通过释放 CXCL2 促进中性粒细胞的募集。在创伤性脑损伤和脑卒中小鼠模型中,使用 BBB 穿透性药物载荷纳米系统对 METTL3 进行药理抑制显示出令人满意的治疗效果。总之,我们的研究结果发现,METTL3-m6A-BATF 轴是终止急性脑损伤后有害神经炎症和进行性神经元损失的潜在治疗靶点。由于 TRIP12 和 ERK-USP5 通路介导的蛋白酶体降解减少,METTL3 蛋白在炎性小胶质细胞中明显上调。METTL3 可稳定 BATF mRNA 的稳定性,并通过 m6A-IGF2BP2 依赖性机制促进 BATF 的表达。BATF 的表达升高会引起小胶质细胞中的促炎基因程序,并加重神经炎症反应,包括局部免疫反应和外周免疫细胞浸润。基因缺失或药物靶向 METTL3-BATF 轴可抑制小胶质细胞促炎活动,促进创伤性脑损伤和中风后的神经功能恢复。
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引用次数: 0
An update on the tumor-suppressive functions of the RasGAP protein DAB2IP with focus on therapeutic implications 更新 RasGAP 蛋白 DAB2IP 的肿瘤抑制功能,重点关注其治疗意义。
IF 13.7 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-20 DOI: 10.1038/s41418-024-01332-3
Rossella De Florian Fania, Arianna Bellazzo, Licio Collavin
The dynamic crosstalk between tumor and stromal cells is a major determinant of cancer aggressiveness. The tumor-suppressor DAB2IP (Disabled homolog 2 interacting protein) plays an important role in this context, since it modulates cell responses to multiple extracellular inputs, including inflammatory cytokines and growth factors. DAB2IP is a RasGAP and negatively controls Ras-dependent mitogenic signals. In addition, it modulates other major oncogenic pathways, including TNFα/NF-κB, WNT/β-catenin, PI3K/AKT, and androgen receptor signaling. In line with its tumor-suppressive role, DAB2IP is frequently inactivated in cancer by transcriptional and post-transcriptional mechanisms, including promoter methylation, microRNA-mediated downregulation, and protein-protein interactions. Intriguingly, some observations suggest that downregulation of DAB2IP in cells of the tumor stroma could foster establishment of a pro-metastatic microenvironment. This review summarizes recent insights into the tumor-suppressive functions of DAB2IP and the consequences of its inactivation in cancer. In particular, we explore potential approaches aimed at reactivating DAB2IP, or augmenting its expression levels, as a novel strategy in cancer treatment. We suggest that reactivation or upregulation of DAB2IP would concurrently attenuate multiple oncogenic pathways in both cancer cells and the tumor microenvironment, with implications for improved treatment of a broad spectrum of tumors.
肿瘤和基质细胞之间的动态串扰是癌症侵袭性的主要决定因素。肿瘤抑制因子 DAB2IP(残障同源物 2 互作蛋白)在这种情况下发挥着重要作用,因为它能调节细胞对多种细胞外输入的反应,包括炎症细胞因子和生长因子。DAB2IP 是一种 RasGAP,对 Ras 依赖性有丝分裂信号起负性控制作用。此外,它还能调节其他主要致癌途径,包括 TNFα/NF-κB、WNT/β-catenin、PI3K/AKT 和雄激素受体信号传导。与 DAB2IP 的肿瘤抑制作用相一致的是,DAB2IP 在癌症中经常通过转录和转录后机制失活,包括启动子甲基化、microRNA 介导的下调以及蛋白质与蛋白质之间的相互作用。耐人寻味的是,一些观察结果表明,肿瘤基质细胞中 DAB2IP 的下调可能会促进有利于转移的微环境的建立。本综述总结了最近对 DAB2IP 的肿瘤抑制功能及其在癌症中失活的后果的见解。特别是,我们探讨了旨在重新激活 DAB2IP 或提高其表达水平的潜在方法,以此作为治疗癌症的新策略。我们认为,重新激活或上调 DAB2IP 将同时减弱癌细胞和肿瘤微环境中的多种致癌途径,这对改善多种肿瘤的治疗具有重要意义。
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引用次数: 0
Atg7 autophagy-independent role on governing neural stem cell fate could be potentially applied for regenerative medicine 独立于 Atg7 自噬的神经干细胞命运调控作用有望应用于再生医学
IF 13.7 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-06-19 DOI: 10.1038/s41418-024-01330-5
Yao Shen, Tingting Li, Chengyang Sun, Xin Cheng, Zhi Chen, Guang Wang, Xuesong Yang
A literature review showed that Atg7 biological role was associated with the development and pathogenesis of nervous system, but very few reports focused on Atg7 role on neurogenesis at the region of spinal cord, so that we are committed to explore the subject. Atg7 expression in neural tube is incrementally increased during neurogenesis. Atg7 neural-specific knockout mice demonstrated the impaired motor function and imbalance of neuronal and glial cell differentiation during neurogenesis, which was similarly confirmed in primary neurosphere culture and reversely verified by Atg7 overexpression in unilateral neural tubes of gastrula chicken embryos. Furthermore, activating autophagy in neural stem cells (NSCs) of neurospheres did not rescue Atg7 deficiency-suppressed neuronal differentiation, but Atg7 overexpression on the basis of autophagy inhibition could reverse Atg7 deficiency-suppressed neuronal differentiation, which provides evidence for the existence of Atg7 role of autophagy-independent function. The underlying mechanism is that Atg7 deficiency directly caused the alteration of cell cycle length of NSCs, which is controlled by Atg7 through specifically binding Mdm2, thereby affecting neuronal differentiation during neurogenesis. Eventually, the effect of overexpressing Atg7-promoting neuronal differentiation was proved in spinal cord injury model as well. Taken together, this study revealed that Atg7 was involved in regulating neurogenesis by a non-autophagic signaling process, and this finding also shed light on the potential application in regenerative medicine.
文献综述显示,Atg7的生物学作用与神经系统的发育和发病机制有关,但很少有报道关注Atg7在脊髓区域神经发生中的作用,因此我们致力于探讨这一主题。Atg7在神经管中的表达在神经发生过程中逐渐增加。Atg7神经特异性基因敲除小鼠在神经发生过程中表现出运动功能受损以及神经元和胶质细胞分化失衡,这一点在原代神经球培养中得到了类似的证实,而在单侧鸡胚胃神经管中Atg7的过表达则得到了反向验证。此外,激活神经球神经干细胞(NSCs)的自噬并不能挽救Atg7缺乏所抑制的神经元分化,但在抑制自噬的基础上过表达Atg7却能逆转Atg7缺乏所抑制的神经元分化,这为Atg7存在自噬依赖性功能提供了证据。其基本机制是Atg7缺乏直接导致了NSCs细胞周期长度的改变,而Atg7是通过特异性结合Mdm2来控制NSCs细胞周期长度的,从而影响了神经发生过程中神经元的分化。最终,在脊髓损伤模型中也证实了过表达Atg7促进神经元分化的作用。综上所述,这项研究揭示了Atg7通过非自噬信号转导过程参与调节神经发生,这一发现也为再生医学的潜在应用提供了启示。
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Cell Death and Differentiation
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