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Cover Picture: Synthesis and Antifungal Activities of Glucosamine Aromatic Derivatives Against Four Phytopathogenic Fungi of Crops (Chem. Biodiversity 11/2024) 封面图片:氨基葡萄糖芳香衍生物的合成及其对四种作物植物病原真菌的抗真菌活性(化学.)
IF 2.3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-16 DOI: 10.1002/cbdv.202471102
Lulu Wu, Lijun Shi, Liangxin Fan, Zhenliang Pan, Zhonglin Zhao, Hui Su, Caixia Wang, Nan Yang, Cuilian Xu, Guoyu Yang

Cover Feature. A series of diversified glucosamine derivatives was synthesized and their antifungal activity was examined against crop phytopathogens. One of compounds showed remarkable antifungal activity against Fusarium graminearum with EC50 value of 3.96 μg/mL. 3D-QSAR model with the statistically recommended values (r2=0.915, q2=0.872) showed that positive charge group or bulky group in the benzyl ring was favorable for the antifungal activity. More details can be found in article number e202401052 by Guoyu Yang and co-workers (see 10.1002/cbdv.202401052).

封面特点。研究人员合成了一系列多样化的氨基葡萄糖衍生物,并考察了它们对农作物植物病原菌的抗真菌活性。其中一个化合物对禾谷镰刀菌具有显著的抗真菌活性,EC50 值为 3.96 μg/mL。三维-QSAR 模型的统计推荐值(r2=0.915,q2=0.872)表明,苄基环中的正电荷基团或稠厚基团对抗真菌活性有利。更多详情可参见杨国宇及其合作者撰写的编号为 e202401052 的文章(见 10.1002/cbdv.202401052)。
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引用次数: 0
Front Cover: Heteroaryl Group Containing Trisubstituted Alkenes: Synthesis and Anti-Tumor Activity (Chem. Biodiversity 11/2024) 封面:含杂芳基的三取代烯:合成与抗肿瘤活性(化学生物多样性 11/2024)
IF 2.3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-16 DOI: 10.1002/cbdv.202471101
Jiatong Li, Ao Gu, Meng-Yao Li

Front Cover. The design and synthesis of molecules with anti-tumor activity are of paramount importance in the field of medicinal chemistry. Multi-substituted alkenes and heterocyclic compounds represent two scaffolds that demonstrate significant anti-tumor properties. By integrating hetero-aromatic rings into the multi-substituted alkene framework, a series of novel bioactive molecules can be developed. In article number e202401469, Meng-Yao Li and co-workers synthesized a variety of trisubstituted alkenes incorporating nitrogen, oxygen, and sulfur atoms, and subsequently evaluated their in vitro activities against gallbladder and pancreatic cancers (see 10.1002/cbdv.202401469).

封面。在药物化学领域,设计和合成具有抗肿瘤活性的分子至关重要。多取代烯类和杂环化合物是两种具有显著抗肿瘤特性的支架。通过将杂芳环整合到多取代烯框架中,可以开发出一系列新型生物活性分子。在编号为 e202401469 的文章中,李梦瑶及其合作者合成了多种含有氮、氧和硫原子的三取代烯类化合物,并随后评估了它们对胆囊癌和胰腺癌的体外活性(见 10.1002/cbdv.202401469)。
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引用次数: 0
Physicochemical Characteristics of 'Wushan Plum' Subjected to Three Drying Methods. 三种干燥方法下 "巫山杨梅 "的理化特征
IF 2.3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-16 DOI: 10.1002/cbdv.202402125
Si Tan, Guangzhen Xin, Xiang Ding, Wenfeng Li

In this study, the effects of hot air drying (HAD), freeze-drying (FD), and air-impingement jet drying (JD) on the physicochemical characteristics of 'Wushan plum' were analyzed. The results indicated three drying methods affected the browning, ascorbic acids, phenolic compounds, and antioxidant activities. The ascorbic acid content in HAD, FD, and JD samples was1.75±0.38, 5.88±0.56, and 4.73±0.75 mg/100 g, respectively, and the content of total phenolic compounds was 2.76±0.10, 3.05±0.04, and 2.83±0.24 mg/g, respectively. HAD samples had the lowest antioxidant activities as determined by DPPH·, ABTS+·, and FRAP assays. In addition, 11 phenolic compounds in 'Wushan plum' were quantified by UPLC-QqQ-MS/MS. The results showed that quercetin glycoside was the main compound, and its content was significantly reduced by these three drying methods. In all, this result indicated that JD would be a good choice for dying 'Wushan plum' considering the drying time, drying efficiency, and the integrated quality of the dried sample.

本研究分析了热空气干燥法(HAD)、冷冻干燥法(FD)和气流喷射干燥法(JD)对 "巫山杨梅 "理化特性的影响。结果表明,三种干燥方法都会影响褐变、抗坏血酸、酚类化合物和抗氧化活性。HAD、FD 和 JD 样品的抗坏血酸含量分别为(1.75±0.38)、(5.88±0.56)和(4.73±0.75)毫克/100 克,总酚类化合物含量分别为(2.76±0.10)、(3.05±0.04)和(2.83±0.24)毫克/克。经 DPPH-、ABTS+- 和 FRAP 试验测定,HAD 样品的抗氧化活性最低。此外,还采用 UPLC-QqQ-MS/MS 对'巫山杨梅'中的 11 种酚类化合物进行了定量分析。结果表明,槲皮素苷是主要的化合物,这三种干燥方法都显著降低了其含量。总之,这一结果表明,考虑到干燥时间、干燥效率和干燥样品的综合质量,JD 是对'巫山杨梅'进行干燥的良好选择。
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引用次数: 0
Chemical Constituents of the Deep-sea Derived Fungus Purpureocillium lilacinum XIA-9. 来自深海的真菌 Purpureocillium lilacinum XIA-9 的化学成分。
IF 2.3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-16 DOI: 10.1002/cbdv.202402766
Jia-Xin Duan, Yan-Lin Ma, Zhe-Wen Chen, Zheng-Biao Zou, Rong Chao, You Li, Bao-Fu Li, Yuan Wang, Ying-Ni Pan, Xian-Wen Yang

Two new sphingosine derivatives (1 and 2), two new vicinal diol analogs (3 and 4), one new diol analog (5), one new fatty acid (9), together with 19 known compounds (6-8, 10-24), were isolated from Purpureocillium lilacinum XIA-9. Their structures were determined by detailed analysis of the 1D and 2D NMR, HRESIMS, and optical rotatory data. Fusarubin 3-methyl ether (17) exhibited potent inhibition on RSL3 induced ferroptosis with the EC50 value of 0.1 μM.

从 Purpureocillium lilacinum XIA-9 中分离出了两种新的鞘氨醇衍生物(1 和 2)、两种新的邻位二元醇类似物(3 和 4)、一种新的二元醇类似物(5)、一种新的脂肪酸(9)以及 19 种已知化合物(6-8、10-24)。通过对一维和二维核磁共振、HRESIMS 和光学旋转数据的详细分析,确定了这些化合物的结构。Fusarubin 3-甲基醚(17)对 RSL3 诱导的铁变态反应有很强的抑制作用,EC50 值为 0.1 μM。
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引用次数: 0
Development of an Antiviral Medicinal Plant and Natural Product Database (avMpNp Database) from Biodiversity. 从生物多样性中开发抗病毒药用植物和天然产品数据库(avMpNp 数据库)。
IF 2.3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-15 DOI: 10.1002/cbdv.202400285
Daniela Quadros de Azevedo, João Vinícius Viera Nóia, Yasmim Carla M Ribeiro, Raphael Alves Dos Reis, Paulo Henrique Otoni Ribeiro, Gustavo Almeida Moura, Pamela Mendes, Ana Beatriz Barbosa de Souza, Sofia Carpini Mermejo, Mateus Sá Magalhães Serafim, Thaís Helena Maciel Fernandes, Anthony J O'Donoghue, Alessandra C Faria Aguiar Campos, Sérgio Vale Aguiar Campos, Vinícius Gonçalves Maltarollo, Rachel Oliveira Castilho

The construction of compound databases (DB) is a strategy for the rational search of bioactive compounds and drugs for new and old diseases. In order to bring greater impact to drug discovery, we propose the development of a DB of bioactive antiviral compounds. Several research groups have presented evidence of the antiviral activity of medicinal plants and compounds isolated from these plants. We believe that compiling these discoveries in a DB would benefit the scientific research community and increase the speed to discover new potential drugs and medicines. Thus, we present the Antiviral Medicinal Plant and Natural Product DB (avMpNp DB) as an important source for acquiring, organizing, and distributing knowledge related to natural products and antiviral drug discovery. The avMpNp DB contains a series of chemically diverse compounds with drug-like profiles. To test the potential of this DB, SARS-CoV-2 Mpro and PLpro enzymatic inhibition assays were performed for available compounds resulting in IC50 values ranging from 6.308±0.296 to 15.795±0.155 μM. As a perspective, artificial intelligence tools will be added to implement computational predictions, as well as other chemical functionalities that allow data validation.

构建化合物数据库(DB)是合理寻找生物活性化合物和新旧疾病药物的一种策略。为了给药物发现带来更大的影响,我们建议开发生物活性抗病毒化合物数据库。一些研究小组已经提出了药用植物和从这些植物中分离出来的化合物具有抗病毒活性的证据。我们相信,将这些发现汇编到数据库中将有利于科研界,并加快发现新的潜在药物和药品的速度。因此,我们提出了抗病毒药用植物和天然产品数据库(avMpNp DB),作为获取、组织和传播天然产品和抗病毒药物发现相关知识的重要来源。avMpNp 数据库包含一系列具有药物特征的化学多样性化合物。为测试该数据库的潜力,对现有化合物进行了 SARS-CoV-2 Mpro 和 PLpro 酶抑制试验,结果显示 IC50 值范围为 6.308±0.296 至 15.795±0.155 μM。展望未来,还将增加人工智能工具来实现计算预测,以及其他化学功能,以便进行数据验证。
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引用次数: 0
Benzofuran-chalcone derivatives as VEGFR-2 inhibitors: synthesis and anticancer evaluation. 作为 VEGFR-2 抑制剂的苯并呋喃-查尔酮衍生物:合成与抗癌评估。
IF 2.3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-15 DOI: 10.1002/cbdv.202401991
Yixin Liu, Chunfei Zhang, Xiao Zhang, Chunping Wan, Zewei Mao

The discovery and development of efficient VEGFR-2 inhibitors has become a research hotspot in cancer treatment. In this work, a series of new benzofuran-based chalcone derivatives have been prepared, and in vitro anticancer activities have been evaluated. The results revealed that derivatives showed selective cytotoxic activity against HCC1806, Hela and A549 cell lines, especially 5c exhibited excellent inhibitory effect on VEFGR-2 (IC50 = 1.07 nM). The molecular docking study indicated that 5c had an obvious binding site with the target VEGFR-2 (PDB ID: 4BSK). Therefore, the benzofuran-based chalcone derivatives could be potent VEGFR-2 inhibitors.

发现和开发高效的 VEGFR-2 抑制剂已成为癌症治疗的研究热点。本研究制备了一系列新的苯并呋喃基查耳酮衍生物,并对其进行了体外抗癌活性评价。结果表明,这些衍生物对HCC1806、Hela和A549细胞株具有选择性的细胞毒活性,尤其是5c对VEFGR-2具有很好的抑制作用(IC50 = 1.07 nM)。分子对接研究表明,5c 与靶标 VEGFR-2 有明显的结合位点(PDB ID:4BSK)。因此,苯并呋喃基查尔酮衍生物可能是有效的 VEGFR-2 抑制剂。
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引用次数: 0
Antibacterial Activity, GC MS Analysis and In Silico Validation of Bioactive Compound from Endophytic Fungus Lasiodiplodia pseudotheobromae EF-9. 内生真菌 Lasiodiplodia pseudotheobromae EF-9 的抗菌活性、气相色谱质谱分析和生物活性化合物的硅学验证。
IF 2.3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-14 DOI: 10.1002/cbdv.202401448
Kuppuswamy Kavitha, Udhayakumar Yuvaraj, Arumugam Rajalakshmi, Gopal Suresh, Manoharan Harini, Vadivel Prabakaran, Selvaraj Bharathi, Rengarajulu Puvanakrishnan, Balasubramanian Ramesh

Secondary metabolites synthesized by endophytic fungi have garnered significant interest for their broad applications in treating various ailments. In this study involving 20 plant samples, 11 endophytic fungi were isolated and cultured, and Lasiodiplodia pseudotheobromae EF-9, derived from Hibiscus rosa-sinensis, demonstrated greater antibacterial efficacy than the other isolated endophytes. Phylogenetic analyses using 18S rRNA gene confirmed the EF-9 identity as L. pseudotheobromae. Following mass production, the active compound was partially purified using column chromatography. The fraction collected at the 60th min exhibited good antibacterial activity against Bacillus coagulans (MTCC 6735) and Shigella flexneri (ATCC 12022), with an inhibition zone of approximately 20 mm in diameter. UV spectral studies revealed a wide absorption band at 430 nm. High Performance Liquid Chromatography (HPLC) of the active fraction showed a distinct peak with a retention time of 4.216 min at 430 nm absorbance. Gas Chromatography-Mass Spectrometry (GC-MS) identified the active compound in the L. pseudotheobromae EF-9 culture broth extract as Bis(2-ethylhexyl) phthalate, which displayed a peak at 16.856 min and covered 66.69% of the area in the spectral analysis.

内生真菌合成的次级代谢物因其在治疗各种疾病方面的广泛应用而备受关注。在这项涉及 20 种植物样本的研究中,分离并培养了 11 种内生真菌,其中来自木槿的 Lasiodiplodia pseudotheobromae EF-9 比其他分离的内生真菌具有更强的抗菌功效。利用 18S rRNA 基因进行的系统发育分析证实,EF-9 是 L. pseudotheobromae。批量生产后,使用柱层析法对活性化合物进行了部分纯化。第 60 分钟收集的馏分对凝结芽孢杆菌(MTCC 6735)和柔性志贺氏菌(ATCC 12022)具有良好的抗菌活性,抑制区直径约为 20 毫米。紫外光谱研究显示,在 430 纳米处有一个宽吸收带。活性成分的高效液相色谱(HPLC)显示,在 430 纳米吸光度处有一个明显的峰,保留时间为 4.216 分钟。气相色谱-质谱法(GC-MS)确定了假单胞菌 EF-9 培养液提取物中的活性化合物为邻苯二甲酸二(2-乙基己酯),其峰值出现在 16.856 分钟处,在光谱分析中覆盖了 66.69% 的面积。
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引用次数: 0
Discovery of New Immunomodulatory Anticancer Thalidomide Analogs: Design, Synthesis, Biological Evaluation and In Silico Studies. 发现新的免疫调节抗癌沙利度胺类似物:设计、合成、生物学评价和硅学研究。
IF 2.3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-14 DOI: 10.1002/cbdv.202401768
Abdallah E Abdallah, Ibrahim Eissa, Ahmed Mehany, Ismail Celik, Helmy Sakr, Khaled Metwaly, Khaled El-Adl, Mohamed Ayman Ali El-Zahabi

New thalidomide analogs have been designed and synthesized by hybridizing the immunomodulatory gutarimide moiety with three antiproliferative nuclei: quinazolinedione, phthalazinedione, and quinoxalinone. The biological results revealed the strong impact of quinazoline derivatives 7a and 28, and phthalazine based 20a against HepG-2, MCF-7, PC3, and HCT-116 cell lines, compared to thalidomide. In particular, compound 20a was the most promising as it had far better biological activity than thalidomide with regard to inhibition of TNF-α, IL-6, caspase 3, COX-I/II, and VEGFR-2, as well as cell cycle arrest, and apoptosis rate enhancement in MCF-7 cells, the most sensitive cell line to the current new molecules. Compound 20a caused reduction in levels of TNF-α and IL-6 by 75.22% and 82.51%, respectively. It elevated the caspase-3 level by 7.21-fold. Furthermore, IC50 against COX-I, COX-II, and VEGFR-2 were 0.65 μM, 0.33 μM, and 232 nM, respectively. In addition, it raised the apoptosis rate from 65.65% to 99.89%. Moreover, 20a was further examined through a docking study and a 200 ns molecular dynamics simulation for its complex with VEGFR-2, along with computational ADME properties. This work suggests the high significance of compounds 20a, 7a and 28, as lead compounds for development of new effective immunomodulatory antitumor drugs.

通过将具有免疫调节作用的古达亚胺分子与喹唑啉二酮、酞嗪二酮和喹喔啉酮这三种抗增殖核杂交,设计并合成了新的沙利度胺类似物。生物学结果表明,与沙利度胺相比,喹唑啉衍生物 7a 和 28 以及基于酞嗪的 20a 对 HepG-2、MCF-7、PC3 和 HCT-116 细胞株有很强的抑制作用。其中,化合物 20a 最有前途,因为它在抑制 TNF-α、IL-6、caspase 3、COX-I/II 和 VEGFR-2 方面的生物活性远远优于沙利度胺,而且还能抑制 MCF-7 细胞的细胞周期,提高其凋亡率,而 MCF-7 细胞是对目前的新分子最敏感的细胞系。化合物 20a 可使 TNF-α 和 IL-6 水平分别降低 75.22% 和 82.51%。它还能使 Caspase-3 水平升高 7.21 倍。此外,它对 COX-I、COX-II 和 VEGFR-2 的 IC50 分别为 0.65 μM、0.33 μM 和 232 nM。此外,它还将细胞凋亡率从 65.65% 提高到了 99.89%。此外,还通过对接研究和 200 ns 分子动力学模拟进一步研究了 20a 与血管内皮生长因子受体-2 的复合物以及计算 ADME 特性。这项工作表明,化合物 20a、7a 和 28 作为先导化合物,对开发新的有效免疫调节抗肿瘤药物具有重要意义。
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引用次数: 0
Chemical Information Network and Molecular Docking Inspire the Novel Indole Discovery Against Glioma from Tabernaemontana corymbosa. 化学信息网络和分子对接启发了从 Tabernaemontana corymbosa 中发现抗胶质瘤的新型吲哚。
IF 2.3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-14 DOI: 10.1002/cbdv.202402586
Yun-Lin Peng, Da Song, Yan Xue, Wei Han, Xia Liu, Ting-Ting Feng, Ying Zhou, Xin Wei

The alkaloid ingredients were considered to be responsible for the diverse pharmacological activities of the medicinal plant Tabernaemontana corymbosa (Roxb. ex Wall.). In the current finding, the systematic phytochemical investigation on T. corymbosa have been achieved. One new indole alkaloid tabercorympyline A (1) along with seven known indoles (2-8) were isolated from T. corymobsa. Their structures were elucidated by means of spectroscopic techniques and quantum chemical calculations. Tabercorympyline A (1) possessed the indole skeleton with rare N-containing nine membered ring. Chemical information network was used to comprehensively discover the clues for the glioma therapeutic leads from T. corymbosa alkaloids (TA). Inspired by chemical information network analysis, all the isolated compounds have been further validated their anti glioma activities in glioma cell line U251. Interestingly, the compounds 2, 3, 5, and 6 exhibited significant inhibitory effects on glioma cells in vitro. Molecular docking was ultimately used to indicate possible binding performance and mechanism between active compounds (2-3) and the core targets. This study sequentially assembled chemical information and network analysis, phytochemistry, molecular docking, and in vitro activity validation to comprehensively explore the effective compounds, related targets, and potential mechanisms of TA therapy for glioma.

生物碱成分被认为是药用植物 Tabernaemontana corymbosa(Roxb.)目前的研究结果对 T. corymbosa 进行了系统的植物化学调查。从 T. corymobsa 中分离出了一种新的吲哚生物碱 tabercorympyline A(1)和七种已知的吲哚(2-8)。通过光谱技术和量子化学计算阐明了它们的结构。Tabercorympyline A(1)具有吲哚骨架和罕见的含 N 的九元环。利用化学信息网络,全面发掘了蝙蝠葛碱(TA)治疗神经胶质瘤的线索。在化学信息网络分析的启发下,所有分离出的化合物都在胶质瘤细胞系 U251 中进一步验证了其抗胶质瘤活性。有趣的是,化合物 2、3、5 和 6 在体外对胶质瘤细胞有明显的抑制作用。分子对接最终被用来说明活性化合物(2-3)与核心靶点之间可能的结合性能和机制。本研究通过化学信息和网络分析、植物化学、分子对接和体外活性验证等方法,全面探讨了脑胶质瘤的有效化合物、相关靶点和TA治疗的潜在机制。
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引用次数: 0
Investigating the Antiproliferative Activity of Novel 4-Chloro-8-Nitro-1,2-Dihydro-3-Quinoline Acylhydrazones on Human Cervical Cancer Cell Lines. 研究新型 4-氯-8-硝基-1,2-二氢-3-喹啉酰肼对人类宫颈癌细胞株的抗增殖活性
IF 2.3 3区 化学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-14 DOI: 10.1002/cbdv.202401636
Vandana Nandakumar, Sentamil Selvi Ramasamy, Kaviyarasu Adhigaman, Deepak Arumugam, Shankar Ramasamy, Vivek Raju, Athimoolam Shunmuganarayanan, Suresh Thangaraj

A new series of acyl hydrazones have been synthesized from 4-chloro-8-nitro-1,2-dihydroquinoline-3-carbaldehyde. These compounds were characterized using various spectroscopic techniques. Density functional theoretical (DFT) studies were conducted to understand the correlation between electronic parameters and biological activity. The biological activity of the compounds was theoretically examined through molecular docking and ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity) analysis. The compounds demonstrated high absorption rates and were found to be non-hepatotoxic. Preliminary cytotoxicity screenings against HeLa cell lines identified compound 7 as the most potent, with an IC50 value of 18.8 μM. This compound was further selected for bioimaging studies. The results indicate that compound 7 induces apoptosis at its IC50 concentration, suggesting its potential as an anticancer agent.

由 4-氯-8-硝基-1,2-二氢喹啉-3-甲醛合成了一系列新的酰基肼。利用各种光谱技术对这些化合物进行了表征。为了了解电子参数与生物活性之间的相关性,对这些化合物进行了密度泛函理论(DFT)研究。通过分子对接和 ADMET(吸收、分布、代谢、排泄和毒性)分析,对这些化合物的生物活性进行了理论研究。结果表明,这些化合物的吸收率很高,而且没有肝毒性。对 HeLa 细胞系进行的初步细胞毒性筛选发现,化合物 7 的药效最强,IC50 值为 18.8 μM。该化合物被进一步选入生物成像研究。结果表明,化合物 7 在其 IC50 浓度下可诱导细胞凋亡,这表明它具有作为抗癌剂的潜力。
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引用次数: 0
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