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Détermination de lˈétat dˈamaigrissement des civelles (Anguilla Anguilla) en migration en zones côtière et estuarienne 测定lˈd状态ˈ消耗量)榆树(安圭拉)在河口及沿海地区迁移
Pub Date : 2001-04-01 DOI: 10.1016/S0764-4469(00)01304-4
Marie-Noëlle de Casamajor , Raymonde Lecomte-Finiger , Patrick Prouzet

The objective of this work is to characterise the variations of the quality of the glass eels recruitment during a season of migration, from November till March and before and after the transition from marine to continental environment. The emaciation state measured from the ratio DNA/Dry weight and percentage of body water is analysed from a sampling of glass-eels collected at sea and in estuary, in the South of the Bay of Biscay during the migration period 1999/2000. The length and the mass are taken into account, they decrease during the season while the individuals are more and more pigmented. However, our work shows that groups of glass eels arriving on the coasts of the Bay of Biscay are homogeneous from the point of view of their energetic and hydride reserves with a high individual variability within these groups. Also no significant difference in losses of water and energetic reserve were observed among the individuals migrating at the beginning and during tide stream. Fluctuations of the biochemical indication and the percentage of water between the glass eels caught in sea and in estuary show that the transition between maritime and continental environment is not a mobilising event of a lot of energy for glass eels. Differences were only observed in December.

这项工作的目的是描述玻璃鳗在迁徙季节(从11月到3月)以及从海洋环境过渡到大陆环境前后的质量变化。从1999/2000年迁徙期间在比斯开湾南部的海上和河口采集的玻璃鳗样本中,通过DNA/干重比率和身体水分百分比测量的消瘦状态进行了分析。考虑到长度和质量,它们在季节中减少,而个体的色素越来越多。然而,我们的工作表明,从能量和氢化物储量的角度来看,到达比斯开湾海岸的玻璃鳗鱼群体是均匀的,这些群体内部具有很高的个体可变性。在潮初和潮中迁徙个体的水分损失和能量储备也没有显著差异。在海洋和河口捕获的玻璃鳗之间的生化指标和水分百分比的波动表明,海洋和大陆环境之间的转变对玻璃鳗来说不是一个大量能量调动的事件。只有在12月份才观察到差异。
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引用次数: 10
Le daltonisme et la génétique du vieillissement 色盲和衰老的遗传学
Pub Date : 2001-04-01 DOI: 10.1016/S0764-4469(00)01288-9
François Schächter , Michel Foulon , Michel Poulain

In order to test whether mutations giving rise to color vision deficiencies are more frequently inherited from older fathers, an exhaustive screening of births in the Namur region has allowed to isolate a sample of 225 descending sons of maternal grandfathers who were older than 45 years at their daughter’s birth. The incidence of color vision defects was compared between this set of cases and three control groups totalling 959 boys from independent families. While these comparisons were not conclusive, we propose new hypotheses concerning the population dynamics of color vision deficiencies. Neomutations in X-linked pigment genes may be a marker of the overall genetic load borne by the X chromosome. Selection against such loaded X chromosomes may occur in the second generation, either in the course of embryogenesis, or during female gametogenesis. The future assessment of these novel hypotheses relies on the arbitration of molecular genetics.

为了测试导致色觉缺陷的突变是否更频繁地遗传自年长的父亲,对那慕尔地区的新生儿进行了详尽的筛查,分离出225名在女儿出生时年龄超过45岁的外祖父的后代。将这组病例与三个独立家庭的959名男孩的色觉缺陷发生率进行比较。虽然这些比较不是结论性的,但我们提出了关于色觉缺陷群体动态的新假设。X连锁色素基因的突变可能是X染色体总体遗传负荷的一个标志。对这种负载X染色体的选择可能发生在第二代,要么在胚胎发生过程中,要么在雌性配子体发生过程中。这些新假设的未来评估依赖于分子遗传学的仲裁。
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引用次数: 0
Carbon isotope discrimination and mineral composition of three organs in durum wheat genotypes grown under Mediterranean conditions 地中海条件下硬粒小麦基因型三个器官的碳同位素鉴定和矿物组成
Pub Date : 2001-04-01 DOI: 10.1016/S0764-4469(01)01307-5
Othmane Merah

Carbon isotope discrimination (Δ) has been proposed as a good criterion for transpiration efficiency and grain yield improvement. Its measurement, however, remains very expensive. Ash content (ma) has been proposed as an alternative criterion for Δ in bread wheat and barley. The aims of this study were (i) to analyse the relationships between Δ and mineral composition in different durum wheat plant parts and (ii) to compare the variation of these traits between landraces and improved varieties from different geographic origins. For this purpose, Δ, ma, and composition in four minerals (K, Mg, P and Si) were assessed in flag leaves and awns at anthesis, and in mature grains of ten durum wheat genotypes grown under rainfed Mediterranean conditions. The three plant parts differed significantly for the measured traits. Significant correlations were noted between Δ and ma in the flag leaf and in the grain. Silicon content in flag leaves and potassium content in awns were also positively related to Δ of the considered plant part. The coefficient of correlation between Δ and ma was generally higher than that observed between individual mineral content and Δ, suggesting that ma is the better alternative criterion for Δ. In addition, grain yield was related to grain Δ and both ma and potassium content in awns. Harvest index was correlated with Δ and ma of grain and flag leaf. These results emphasised that ma values in flag leaf and grain represent the efficiency of carbon partitioning to the grain. Improved varieties showed higher Δ and ma values than landraces. Differences between Middle-East and West Mediterranean genotypes for the measured traits were also presented and discussed.

碳同位素鉴别(Δ)被认为是蒸腾效率和提高粮食产量的良好标准。然而,它的测量仍然非常昂贵。灰分含量(ma)已被提议作为面包、小麦和大麦中Δ的替代标准。本研究的目的是:(i)分析Δ与不同硬粒小麦植株部位矿物成分之间的关系;(ii)比较这些性状在不同地理来源的地方品种和改良品种之间的差异。为此,在地中海雨养条件下生长的10种硬粒小麦基因型的旗叶、花期芒和成熟籽粒中,对Δ、ma和4种矿物质(K、Mg、P和Si)的组成进行了评估。3个植株部位的测定性状差异显著。旗叶和籽粒中Δ与ma呈极显著相关。旗叶中硅含量和草坪中钾含量也与所考虑的植物部位Δ呈正相关。Δ与ma之间的相关系数普遍高于单项矿物含量与Δ之间的相关系数,表明ma是Δ的较好替代判据。此外,籽粒产量与籽粒Δ及芒中钾、钾含量均有关。收获指数与籽粒和旗叶的Δ、ma相关。这些结果强调,旗叶和籽粒中的ma值代表了碳向籽粒的分配效率。改良品种的Δ和ma值均高于地方品种。中东和西地中海基因型在测定性状上的差异也进行了介绍和讨论。
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引用次数: 20
Le tardiglaciaire des Ételles (Alpes françaises du Nord) : instabilité climatique et dynamique de végétation etelles(法国北部阿尔卑斯)的晚冰期:气候不稳定和植被动态
Pub Date : 2001-04-01 DOI: 10.1016/S0764-4469(01)01311-7
Fernand David

A detailed pollen analysis has been conducted in a new sedimentary sequence taken at Les Ételles (700 m), in the hill vegetation belt in the Chaîne des Hurtières (Northern French Alps). The Lateglacial history of the vegetation has been supported by 10 AMS datings. Variations in relative abundance of main pollen taxa were compared with variations in ð 18O in Swiss lacustrine sediments and with the GRIP ice-core record. Those highlight how the vegetation reacted to minor climatic oscillations. The Lateglacial spread of Quercus, Alnus and Corylus in the region is confirmed, thus allowing a new interpretation of some Lateglacial sedimentary sequences at an adjacent region (Bas-Dauphiné).

在法国北部阿尔卑斯cha ne des hurti丘陵植被带的Les Ételles(700米),对一个新的沉积序列进行了详细的花粉分析。植被的冰河历史得到了10个AMS定年的支持。将主要花粉分类群的相对丰度变化与瑞士湖泊沉积物中ð 18O的变化以及GRIP冰芯记录进行了比较。它们突出了植被如何对轻微的气候波动作出反应。证实了该地区栎科、桤木科和榛科的冰川分布,从而对邻近地区的一些冰川沉积序列(下- dauphin)进行了新的解释。
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引用次数: 12
Purification of several pectin methyltransferases from cell suspension cultures of flax (Linum usitatissimum L.) 亚麻悬浮细胞中几种果胶甲基转移酶的纯化
Pub Date : 2001-04-01 DOI: 10.1016/S0764-4469(01)01309-9
Thierry Bourlard, Marie-Pierre Bruyant-Vannier, Annick Schaumann, Philippe Bruyant, Claudine Morvan

Three pectin methyltransferases (PMT5, PMT7, PMT18; EC 2.1.1.6.x) were solubilized from the endo-membrane complex of flax cells, with 0.05 % Triton X-100. After a 3 step-chromatography procedure, PMT7 and PMT5 were purified to apparent homogeneity. PMT5 and PMT7 differed regarding their optimum pH (5 or 7), the methyl acceptor (low or highly methylesterified pectin), their focusing pH range (6–7 or 8–9) and relative molecular mass (40 ± 5 or 110 ± 10 kDa). SDS-PAGE of PMT5 and PMT7 did not reveal bands at 40 or 110 kDa but only a silver stained band of about 18 kDa. Two independent methods (photo labelling and enzymatic activity) showed that this silver-stained band corresponded to a methyltransferase with affinity for pectins. This polypeptide was of the same size as the enzyme designed PMT18 (18 ± 3 kDa; pI 4–4.5) recovered during size exclusion chromatography of either PMT7 or PMT5, suggesting that PMT18 bears the catalytic site of PMT5 and PMT7.

三种果胶甲基转移酶(PMT5, PMT7, PMT18;EC 2.1.1.6.x)用0.05% Triton X-100从亚麻细胞的膜内复合物中溶解。经过3步色谱法,PMT7和PMT5被纯化到明显的均匀性。PMT5和PMT7在最佳pH值(5或7)、甲基受体(低或高甲基化果胶)、聚焦pH范围(6-7或8-9)和相对分子质量(40±5或110±10 kDa)方面存在差异。PMT5和PMT7的SDS-PAGE未显示40和110 kDa的条带,仅显示约18 kDa的银色条带。两种独立的方法(光标记和酶活性)表明,这条银染带对应于一种与果胶有亲和力的甲基转移酶。该多肽与设计的酶PMT18大小相同(18±3 kDa;在PMT7和PMT5的粒径隔离层析中都恢复了pI 4-4.5),表明PMT18具有PMT5和PMT7的催化位点。
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引用次数: 4
Binding energy and the information content of some elementary biological processes 一些基本生物过程的结合能和信息量
Pub Date : 2001-04-01 DOI: 10.1016/S0764-4469(00)01291-9
Jacques Ricard

Protein interactions within a multimolecular complex can result in information and energy transfer between proteins. This can lead in turn to the emergence of novel functions of some proteins of the complex. Various examples of this situation can be found in the scientific literature. This is probably the case for prion protein, chloroplast phosphoribulokinase bound to glyceraldehyde phosphate dehydrogenase, Ras system, and pancreatic lipase bound to biomembranes, to cite but a few. Any enzyme reaction, or enzyme reaction network, carries Shannon entropy and information. On contrary to genome entropy, the entropy of enzyme reactions and metabolic sequences is sensitive to ‘external’ signals, such as substrate, effector and proton concentrations. Complex structural organization of the cell is associated with a higher entropy content, and one can calculate the gain of entropy and information due to integration and complexity. One may conclude from this brief analysis that the informational content of a living cell is much larger than that of its genome.

多分子复合物内的蛋白质相互作用可导致蛋白质之间的信息和能量传递。这反过来又会导致复合体中某些蛋白质的新功能的出现。在科学文献中可以找到这种情况的各种例子。这可能是朊病毒蛋白、与甘油醛磷酸脱氢酶结合的叶绿体磷酸核激酶、Ras系统和与生物膜结合的胰脂肪酶的情况,仅举几例。任何酶反应,或酶反应网络,都带有香农熵和信息。与基因组熵相反,酶反应和代谢序列的熵对“外部”信号敏感,如底物、效应物和质子浓度。细胞的复杂结构组织与较高的熵含量相关,由于集成和复杂性,可以计算熵和信息的增益。从这个简短的分析可以得出结论,活细胞的信息量比它的基因组的信息量大得多。
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引用次数: 5
An algorithm for targeted convergence of Euler or Newton iterations 欧拉或牛顿迭代的目标收敛算法
Pub Date : 2001-04-01 DOI: 10.1016/S0764-4469(00)01303-2
René Thomas , Richard d’Ari

The concept of multistationarity has become essential for understanding cell differentiation. For this reason theoretical biologists have more and more frequently to determine the steady values, often multiple, of systems of non-linear differential equations. It is well known that iteration processes of current use converge or not towards a fixed point depending on the absolute value of the slope of the iteration function in the vicinity of the considered fixed point. A number of methods have been developed to obtain or accelerate convergence. As biologists, we do not pretend to review these works. Rather, we propose here a simple algorithm which permits to converge at will towards a chosen type of steady state. Others and we have used this procedure extensively for years for the analysis of complex biological systems. A compact program (using Mathematica) is available.

多平稳性的概念已经成为理解细胞分化的必要条件。因此,理论生物学家越来越频繁地需要确定非线性微分方程系统的稳定值,通常是多个稳定值。众所周知,当前使用的迭代过程收敛与否取决于迭代函数在所考虑的不动点附近的斜率的绝对值。已经开发了许多方法来获得或加速收敛。作为生物学家,我们不会假装审查这些工作。相反,我们在这里提出一个简单的算法,它允许向选定的稳态类型任意收敛。其他人和我们多年来一直广泛使用这种方法来分析复杂的生物系统。可以使用一个紧凑的程序(使用Mathematica)。
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引用次数: 2
A comprehensive phylogeny of the Phaeophyceae based on nrDNA sequences resolves the earliest divergences 基于nrDNA序列的斑藻科综合系统发育解决了最早的分歧
Pub Date : 2001-04-01 DOI: 10.1016/S0764-4469(01)01306-3
Florence Rousseau , Renaud Burrowes , Akira F Peters , Ralph Kuhlenkamp , Bruno de Reviers

The present study is the first comprehensive phylogeny of the class of the Phaeophyceae. For 67 species representing all orders of the class, the sequences of the 3’-end of the small and the 5ˈ-end of the large subunit nrRNA genes were aligned and analysed. A further analysis based on sequences of the 3’-end of the small and of the complete sequences of the 28S gene of the large subunits was also performed, but for only eight taxa. In both analyses, Tribonema marinum (Xanthophyceae) was used as outgroup. The analyses showed the Dictyotales as diverging first, followed by the Sphacelariales, then the Syringodermatales. Most of the orders currently accepted were confirmed as monophyletic groups but the Laminariales and Tilopteridales remained polyphyletic. The relationships of the remaining orders to each other were not resolved with the present data set. Ascoseira, included for the first time in a molecular study, appeared as a separate lineage without any clear relationship with other algae possessing conceptacles (Splachnidium and Fucales). Algae with stellate plastids, never studied in a global context, were polyphyletic; this result is consistent with their plastid ultrastructure and is discussed in detail. As further result of the present study, the South African genus Bifurcariopsis appeared as the sister taxon of the North Atlantic genus Himanthalia, and Xiphophora appeared as the sister taxon of Hormosira rather than as a member of the Fucaceae; the taxonomic position of these genera is discussed.

本研究是首个全面的藻门类系统发育研究。对代表该纲所有目的67种进行了小亚基nrRNA基因3′端和大亚基nrRNA基因5′端序列的比对和分析。基于小亚基的3′端序列和大亚基的28S基因全序列也进行了进一步的分析,但仅对8个分类群进行了分析。在这两项分析中,均以海曲菌(Tribonema marinum)作为外类群。分析表明,盘形门首先分化,其次是球形门,然后是注射器皮门。目前接受的大多数目被确认为单系群,但叠层目和蒂翼目仍然是多系群。剩余订单之间的关系在现有的数据集中没有得到解决。Ascoseira首次被纳入分子研究,作为一个独立的谱系出现,与其他具有概念的藻类(Splachnidium和Fucales)没有任何明确的关系。具有星状质体的藻类,从未在全球范围内研究过,是多系的;这一结果与它们的质体超微结构一致,并进行了详细的讨论。作为本研究的进一步结果,南非的Bifurcariopsis属作为北大西洋Himanthalia属的姊妹分类单元出现,Xiphophora作为Hormosira的姊妹分类单元出现,而不是作为Fucaceae的成员;讨论了这些属的分类地位。
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引用次数: 72
Basal teleosts and the question of elopomorph monophyly. Morphological and molecular approaches 基底硬骨鱼与发育形态单系问题。形态学和分子方法
Pub Date : 2001-04-01 DOI: 10.1016/S0764-4469(00)01302-0
Arnaud Filleul , Sébastien Lavoué

The methodology used by previous authors to resolve the relationships of the elopomorphan taxa is criticized. The morphological characters that have been proposed to support the monophyly of the Elopomorpha are reviewed and it is shown that most of them are weak. A new hypothesis of relationships is proposed on the basis of nucleotidic sequences of ribosomal RNA 18S, 16S and 12S. In order to really test all the possible relationships, the monophyly of the Elopomorpha was not considered a priori. The tree was rooted on Amia calva and Lepisosteus osseus and the ingroup taxa sampling was subsequently increased. The obtained topology shows that the Elopomorpha is a non-monophyletic taxon. Elopiforms, anguilliforms, albuliforms and notacanthiforms are considered here as four monophyletic, incertae sedis taxa among basal teleosts.

对以往作者用来解决elopomomorphan类群关系的方法提出了批评。综述了近年来提出的支持其单系性的形态学特征,认为大多数形态学特征都很弱。根据核糖体RNA 18S、16S和12S的核苷酸序列,提出了一种新的关系假设。为了真正检验所有可能的关系,eloopomorpha的单系性并没有被认为是先天的。这棵树的根是Amia calva和Lepisosteus osseus,随后增加了群内分类群的采样。所获得的拓扑结构表明,Elopomorpha是一个非单系分类群。在这里,Elopiforms、anguilliforms、albuliforms和notacanthiforms被认为是四个单系的、不完全的硬骨鱼类群。
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引用次数: 28
Établissement des étages de végétation holocène : vers la modélisation complète d’un massif 全新世植被层的建立:朝向地块的完整建模
Pub Date : 2001-03-01 DOI: 10.1016/S0764-4469(00)01284-1
Fernand David

Pollen and macro-remains were analysed in a sixth site (La Gouille 1 800 m) of the Chaîne des Hurtières (northern French Alps). Nine A.M.S. dates support the chronology. Thus, the establishment of the vegetation belt of a massif can be modelled in the northern French Alps. Betula invaded sub-Alpine grasslands as early as 10 000 14C BP. Around 9 600 14C BP shrublands with Corylus, Alnus and Sorbus were established before the spread of Abies at the site approximately 8 200 14C BP. A decrease in Abies prior to 8 100 14C BP occurred during the Venediger climatic oscillation. At around 2 940 14C BP, a strong regression of Abies due to human action is noted with the expansion of Alnus viridis. Recently, a second Abies retraction led to the present sparce P. cembra and Alnus viridis vegetation cover.

在法国北部阿尔卑斯山脉cha ne des hurti的第6个地点(1 800 m的La Gouille)对花粉和大型遗骸进行了分析。9个ams日期支持这个年表。因此,一个地块的植被带的建立可以模拟在法国阿尔卑斯山北部。桦树早在10000 14C BP就侵入亚高山草原。在冷杉类传播之前,在约8200 BP的14C BP遗址上已建立了约9600个14C BP的灌木林,其中有山楂、桤木和酢浆草。在8 100 14C BP之前,冷杉的减少发生在Venediger气候振荡期间。在2940 - 14C BP左右,由于人类活动,冷杉发生了强烈的退化,绿桤木(Alnus viridis)扩大。近年来,冷杉的第二次退缩导致了目前空间的青花桤木和翠绿桤木植被覆盖。
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引用次数: 10
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