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Software for Salmonella Surveillance Report 沙门氏菌监测报告软件
Pub Date : 2025-10-21 DOI: 10.2903/sp.efsa.2025.EN-9427
Julie Schenk, Machteld Varewyck, Tobias Verbeke, Open Analytics NV

In specific contract No 4 issued under the framework agreement OC/EFSA/MESE/2023/03, EFSA requested Open Analytics NV to reproduce the Salmonella chapter from the European Union One Health – Zoonoses Report Union Summary Report in R Markdown and implement a web application to manage the R Markdown chapters and generate a Word report from it. The R Markdown is parametrized, tables and figures have been reproduced where applicable. The online tool is based on the R package rmdUI, developed by Open Analytics NV. This package allows users to create versions of the report, load chapters in the online tool, edit (text) paragraphs and finally export the full report to a Word document. Additionally, the online tool provides functions to run a quick data validation when uploading new datafiles in an admin tab with restricted access.

在框架协议OC/EFSA/MESE/2023/03下发布的第4号具体合同中,EFSA要求Open Analytics NV在R Markdown中复制欧盟单一健康-人畜共患病报告联盟总结报告中的沙门氏菌章节,并实现一个web应用程序来管理R Markdown章节,并从中生成Word报告。R Markdown是参数化的,表格和数字在适用的地方被复制。在线工具基于Open Analytics NV开发的R包rmdUI。该包允许用户创建报告版本,在在线工具中加载章节,编辑(文本)段落,最后将完整的报告导出为Word文档。此外,在线工具还提供了在访问受限的管理选项卡中上传新数据文件时运行快速数据验证的功能。
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引用次数: 0
Software for TSE Surveillance Report TSE监测报告软件
Pub Date : 2025-10-15 DOI: 10.2903/sp.efsa.2025.EN-9429
Han Bossier, Machteld Varewyck, Tobias Verbeke, Open Analytics NV

In specific contract No 2 issued under the framework agreement OC/EFSA/MESE/2023/03, EFSA requested Open Analytics NV to reproduce the European Union Summary Report on TSE surveillance (TSE report) in R Markdown and implement a web application to manage the R Markdown chapters and generate a Word report from it. The R Markdown is parametrized, tables and figures have been reproduced where applicable. The online tool is based on the R package rmdUI, developed by Open Analytics NV. This package allows users to create versions of the report, load chapters in the online tool, edit (text) paragraphs and finally export the full report to a Word document. Additionally, the online tool provides functions to run a data validation. As well as a tab for admin users to upload/download the raw and derived data.

在框架协议OC/EFSA/MESE/2023/03下发布的第2号具体合同中,EFSA要求Open Analytics NV在R Markdown中复制欧盟关于TSE监测的总结报告(TSE报告),并实现一个web应用程序来管理R Markdown章节,并从中生成Word报告。R Markdown是参数化的,表格和数字在适用的地方被复制。在线工具基于Open Analytics NV开发的R包rmdUI。该包允许用户创建报告版本,在在线工具中加载章节,编辑(文本)段落,最后将完整的报告导出为Word文档。此外,在线工具还提供了运行数据验证的函数。以及管理员用户上传/下载原始和派生数据的选项卡。
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引用次数: 0
Country Report of Croatia for Pesticides Residues business data collection 克罗地亚关于农药残留业务数据收集的国别报告
Pub Date : 2025-10-07 DOI: 10.2903/sp.efsa.2025.EN-9655
Nikolaos Kollaros, Konstantinos Theofilopoulos, Anna Polychroniou, Network Research Belgium (NRB) S.A.

Analysis and mapping of national data flows and processes relevant to EFSA's business data collections is a long-standing EFSA objective, originally launched with EFSA's SIGMA project in 2018-2019 and further continued with the launch of a focused activity to “Develop, pilot and document a methodology for the data flow mapping and analysis in the European Member States” in 2023. The aim of latter activity is to apply a generic methodology for the analysis of any business data collection at Member State level with the ultimate purpose for countries and EFSA to increase understanding of data flows at national level, where existing challenges rely on and what common solutions could be implemented. This report presents results from the execution of the aforementioned methodology on Croatia for the analysis of national data flows which contribute data to Pesticides Residues business data collection. The report contains information on the steps, participant organizations and actors, tools, systems, formats, structural and content metadata, as well as challenges and “pain points” identified in the country's internal data flows related to the collection of selected data. The presented information has been generated based on the responses submitted by the participating Member State to a survey developed in the context of the data flow mapping and analysis methodology as well as relevant discussions held in a post-survey interview with the country. Though the information presented on the current report represents real-world data, it must be clarified that the survey and the follow-up interview with the MS, have been both performed during the activity of the Data Flow Mapping methodology.

分析和绘制与欧洲食品安全局业务数据收集相关的国家数据流和流程是欧洲食品安全局的长期目标,最初是在2018-2019年与欧洲食品安全局的SIGMA项目一起启动的,并在2023年启动了一项重点活动,以“开发、试点和记录欧洲成员国数据流绘制和分析的方法”。后一项活动的目的是应用一种通用方法来分析会员国一级的任何商业数据收集,其最终目的是使各国和欧洲食品安全局增进对国家一级数据流动的了解,现有挑战依赖于国家一级,以及可以实施哪些共同解决办法。本报告介绍了克罗地亚执行上述方法分析国家数据流的结果,这些数据流为农药残留业务数据收集提供了数据。该报告包含有关步骤、参与组织和行为者、工具、系统、格式、结构和内容元数据的信息,以及在该国与收集选定数据有关的内部数据流中确定的挑战和“痛点”。所提供的资料是根据参加调查的会员国对在数据流绘图和分析方法范围内进行的调查所作的答复以及在调查后与该国进行的面谈中进行的有关讨论而产生的。虽然当前报告中提供的信息代表了真实世界的数据,但必须澄清的是,调查和与MS的后续访谈都是在数据流映射方法的活动中进行的。
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引用次数: 0
Country Report of Norway for Prevalence of Zoonoses and Pathogens business data collection 挪威关于人畜共患病和病原体流行情况的国家报告商业数据收集
Pub Date : 2025-10-07 DOI: 10.2903/sp.efsa.2025.EN-9641
Nikolaos Kollaros, Konstantinos Theofilopoulos, Anna Polychroniou, Network Research Belgium (NRB) S.A.

Analysis and mapping of national data flows and processes relevant to EFSA's business data collections is a long-standing EFSA objective, originally launched with EFSA's SIGMA project in 2018-2019 and further continued with the launch of a focused activity to “Develop, pilot and document a methodology for the data flow mapping and analysis in the European Member States” in 2023. The aim of latter activity is to apply a generic methodology for the analysis of any business data collection at Member State level with the ultimate purpose for countries and EFSA to increase understanding of data flows at national level, where existing challenges rely on and what common solutions could be implemented. This report presents results from the execution of the aforementioned methodology on Norway for the analysis of national data flows which contribute data to Prevalence of Zoonoses and Pathogens business data collection. The report contains information on the steps, participant organizations and actors, tools, systems, formats, structural and content metadata, as well as challenges and “pain points” identified in the country's internal data flows related to the collection of the selected data. The presented information has been generated based on the responses submitted by the participating Member State to a survey developed in the context of the data flow mapping and analysis methodology as well as relevant discussions held in a post-survey interview with the country. Though the information presented on the current report represents real-world data, it must be clarified that the survey and the follow-up interview with the MS, have been both performed during the activity of the Data Flow Mapping methodology.

分析和绘制与欧洲食品安全局业务数据收集相关的国家数据流和流程是欧洲食品安全局的长期目标,最初是在2018-2019年与欧洲食品安全局的SIGMA项目一起启动的,并在2023年启动了一项重点活动,以“开发、试点和记录欧洲成员国数据流绘制和分析的方法”。后一项活动的目的是应用一种通用方法来分析会员国一级的任何商业数据收集,其最终目的是使各国和欧洲食品安全局增进对国家一级数据流动的了解,现有挑战依赖于国家一级,以及可以实施哪些共同解决办法。本报告介绍了在挪威执行上述方法分析国家数据流的结果,这些数据流为人畜共患病流行率和病原体业务数据收集提供了数据。该报告包含有关步骤、参与组织和行为者、工具、系统、格式、结构和内容元数据的信息,以及在该国与收集选定数据相关的内部数据流中确定的挑战和“痛点”。所提供的资料是根据参加调查的会员国对在数据流绘图和分析方法范围内进行的调查所作的答复以及在调查后与该国进行的面谈中进行的有关讨论而产生的。虽然当前报告中提供的信息代表了真实世界的数据,但必须澄清的是,调查和与MS的后续访谈都是在数据流映射方法的活动中进行的。
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引用次数: 0
Country Report of Norway for Food Consumption business data collection 挪威食品消费业务数据收集国别报告
Pub Date : 2025-10-07 DOI: 10.2903/sp.efsa.2026.EN-9656
Nikolaos Kollaros, Konstantinos Theofilopoulos, Anna Polychroniou, Network Research Belgium (NRB) S.A.

Analysis and mapping of national data flows and processes relevant to EFSA's business data collections is a long-standing EFSA objective, originally launched with EFSA's SIGMA project in 2018-2019 and further continued with the launch of a focused activity to “Develop, pilot and document a methodology for the data flow mapping and analysis in the European Member States” in 2023. The aim of latter activity is to apply a generic methodology for the analysis of any business data collection at Member State level with the ultimate purpose for countries and EFSA to increase understanding of data flows at national level, where existing challenges rely on and what common solutions could be implemented. This report presents results from the execution of the aforementioned methodology on Norway for the analysis of national data flows which contribute data to Food Consumption business data collection. The report contains information on the steps, participant organizations and actors, tools, systems, formats, structural and content metadata, as well as challenges and “pain points” identified in the country's internal data flows related to the collection of the selected data. The presented information has been generated based on the responses submitted by the participating Member State to a survey developed in the context of the data flow mapping and analysis methodology as well as relevant discussions held in a post-survey interview with the country. Though the information presented on the current report represents real-world data, it must be clarified that the survey and the follow-up interview with the MS, have been both performed during the activity of the Data Flow Mapping methodology.

分析和绘制与欧洲食品安全局业务数据收集相关的国家数据流和流程是欧洲食品安全局的长期目标,最初是在2018-2019年与欧洲食品安全局的SIGMA项目一起启动的,并在2023年启动了一项重点活动,以“开发、试点和记录欧洲成员国数据流绘制和分析的方法”。后一项活动的目的是应用一种通用方法来分析会员国一级的任何商业数据收集,其最终目的是使各国和欧洲食品安全局增进对国家一级数据流动的了解,现有挑战依赖于国家一级,以及可以实施哪些共同解决办法。本报告介绍了上述方法在挪威的执行结果,用于分析为食品消费业务数据收集提供数据的国家数据流。该报告包含有关步骤、参与组织和行为者、工具、系统、格式、结构和内容元数据的信息,以及在该国与收集选定数据相关的内部数据流中确定的挑战和“痛点”。所提供的资料是根据参加调查的会员国对在数据流绘图和分析方法范围内进行的调查所作的答复以及在调查后与该国进行的面谈中进行的有关讨论而产生的。虽然当前报告中提供的信息代表了真实世界的数据,但必须澄清的是,调查和与MS的后续访谈都是在数据流映射方法的活动中进行的。
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引用次数: 0
Country Report of Austria for Chemical Contaminants Occurrence business data collection 奥地利国家化学污染物发生业务数据收集报告
Pub Date : 2025-10-07 DOI: 10.2903/sp.efsa.2025.EN-9653
Nikolaos Kollaros, Konstantinos Theofilopoulos, Anna Polychroniou, Network Research Belgium (NRB) S.A.

Analysis and mapping of national data flows and processes relevant to EFSA's business data collections is a long-standing EFSA objective, originally launched with EFSA's SIGMA project in 2018-2019 and further continued with the launch of a focused activity to “Develop, pilot and document a methodology for the data flow mapping and analysis in the European Member States” in 2023. The aim of latter activity is to apply a generic methodology for the analysis of any business data collection at Member State level with the ultimate purpose for countries and EFSA to increase understanding of data flows at national level, where existing challenges rely on and what common solutions could be implemented. This report presents results from the execution of the aforementioned methodology on Austria for the analysis of national data flows which contribute data to Chemical Contaminants Occurrence business data collection. The report contains information on the steps, participant organizations and actors, tools, systems, formats, structural and content metadata, as well as challenges and “pain points” identified in the country's internal data flows related to the collection of selected data. The presented information has been generated based on the responses submitted by the participating Member State to a survey developed in the context of the data flow mapping and analysis methodology as well as relevant discussions held in a post-survey interview with the country. Though the information presented on the current report represents real-world data, it must be clarified that the survey and the follow-up interview with the MS, have been both performed during the activity of the Data Flow Mapping methodology.

分析和绘制与欧洲食品安全局业务数据收集相关的国家数据流和流程是欧洲食品安全局的长期目标,最初是在2018-2019年与欧洲食品安全局的SIGMA项目一起启动的,并在2023年启动了一项重点活动,以“开发、试点和记录欧洲成员国数据流绘制和分析的方法”。后一项活动的目的是应用一种通用方法来分析会员国一级的任何商业数据收集,其最终目的是使各国和欧洲食品安全局增进对国家一级数据流动的了解,现有挑战依赖于国家一级,以及可以实施哪些共同解决办法。本报告介绍了在奥地利执行上述方法分析国家数据流的结果,这些数据流为化学污染物发生业务数据收集提供了数据。该报告包含有关步骤、参与组织和行为者、工具、系统、格式、结构和内容元数据的信息,以及在该国与收集选定数据有关的内部数据流中确定的挑战和“痛点”。所提供的资料是根据参加调查的会员国对在数据流绘图和分析方法范围内进行的调查所作的答复以及在调查后与该国进行的面谈中进行的有关讨论而产生的。虽然当前报告中提供的信息代表了真实世界的数据,但必须澄清的是,调查和与MS的后续访谈都是在数据流映射方法的活动中进行的。
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引用次数: 0
Country Report of Estonia for Pesticides Residues business data collection 爱沙尼亚关于农药残留业务数据收集的国别报告
Pub Date : 2025-10-07 DOI: 10.2903/sp.efsa.2025.EN-9651
Nikolaos Kollaros, Konstantinos Theofilopoulos, Anna Polychroniou, Network Research Belgium (NRB) S.A.

Analysis and mapping of national data flows and processes relevant to EFSA's business data collections is a long-standing EFSA objective, originally launched with EFSA's SIGMA project in 2018-2019 and further continued with the launch of a focused activity to “Develop, pilot and document a methodology for the data flow mapping and analysis in the European Member States” in 2023. The aim of latter activity is to apply a generic methodology for the analysis of any business data collection at Member State level with the ultimate purpose for countries and EFSA to increase understanding of data flows at national level, where existing challenges rely on and what common solutions could be implemented. This report presents results from the execution of the aforementioned methodology on Estonia for the analysis of national data flows which contribute data to Pesticides Residues business data collection. The report contains information on the steps, participant organizations and actors, tools, systems, formats, structural and content metadata, as well as challenges and “pain points” identified in the country's internal data flows related to the collection of the selected data. The presented information has been generated based on the responses submitted by the participating Member State to a survey developed in the context of the data flow mapping and analysis methodology as well as relevant discussions held in a post-survey interview with the country. Though the information presented on the current report represents real-world data, it must be clarified that the survey and the follow-up interview with the MS, have been both performed during the activity of the Data Flow Mapping methodology.

分析和绘制与欧洲食品安全局业务数据收集相关的国家数据流和流程是欧洲食品安全局的长期目标,最初是在2018-2019年与欧洲食品安全局的SIGMA项目一起启动的,并在2023年启动了一项重点活动,以“开发、试点和记录欧洲成员国数据流绘制和分析的方法”。后一项活动的目的是应用一种通用方法来分析会员国一级的任何商业数据收集,其最终目的是使各国和欧洲食品安全局增进对国家一级数据流动的了解,现有挑战依赖于国家一级,以及可以实施哪些共同解决办法。本报告介绍了在爱沙尼亚执行上述方法分析国家数据流的结果,这些数据流为农药残留业务数据收集提供了数据。该报告包含有关步骤、参与组织和行为者、工具、系统、格式、结构和内容元数据的信息,以及在该国与收集选定数据相关的内部数据流中确定的挑战和“痛点”。所提供的资料是根据参加调查的会员国对在数据流绘图和分析方法范围内进行的调查所作的答复以及在调查后与该国进行的面谈中进行的有关讨论而产生的。虽然当前报告中提供的信息代表了真实世界的数据,但必须澄清的是,调查和与MS的后续访谈都是在数据流映射方法的活动中进行的。
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引用次数: 0
Country Report of France for Veterinary Medicinal Product Residues business data collection 法国关于兽药残留物业务数据收集的国别报告
Pub Date : 2025-10-07 DOI: 10.2903/sp.efsa.2025.EN-9646
Nikolaos Kollaros, Konstantinos Theofilopoulos, Anna Polychroniou, Network Research Belgium (NRB) S.A.

Analysis and mapping of national data flows and processes relevant to EFSA's business data collections is a long-standing EFSA objective, originally launched with EFSA's SIGMA project in 2018-2019 and further continued with the launch of a focused activity to “Develop, pilot and document a methodology for the data flow mapping and analysis in the European Member States” in 2023. The aim of latter activity is to apply a generic methodology for the analysis of any business data collection at Member State level with the ultimate purpose for countries and EFSA to increase understanding of data flows at national level, where existing challenges rely on and what common solutions could be implemented. This report presents results from the execution of the aforementioned methodology on France for the analysis of national data flows which contribute data to Veterinary Medicinal Product Residues business data collection. The report contains information on the steps, participant organisations and actors, tools, systems, formats, structural and content metadata, as well as challenges and “pain points” identified in the country's internal data flows related to the collection of the selected data. The presented information has been generated based on the responses submitted by the participating Member State to a survey developed in the context of the data flow mapping and analysis methodology as well as relevant discussions held in a post-survey interview with the country. Though the information presented on the current report represents real-world data, it must be clarified that the survey and the follow-up interview with the MS, have been both performed during the activity of the Data Flow Mapping methodology.

分析和绘制与欧洲食品安全局业务数据收集相关的国家数据流和流程是欧洲食品安全局的长期目标,最初是在2018-2019年与欧洲食品安全局的SIGMA项目一起启动的,并在2023年启动了一项重点活动,以“开发、试点和记录欧洲成员国数据流绘制和分析的方法”。后一项活动的目的是应用一种通用方法来分析会员国一级的任何商业数据收集,其最终目的是使各国和欧洲食品安全局增进对国家一级数据流动的了解,现有挑战依赖于国家一级,以及可以实施哪些共同解决办法。本报告介绍了在法国执行上述方法分析国家数据流的结果,这些数据流为兽药残留物业务数据收集提供了数据。该报告包含有关步骤、参与组织和行为者、工具、系统、格式、结构和内容元数据的信息,以及在该国与收集选定数据相关的内部数据流中确定的挑战和“痛点”。所提供的资料是根据参加调查的会员国对在数据流绘图和分析方法范围内进行的调查所作的答复以及在调查后与该国进行的面谈中进行的有关讨论而产生的。虽然当前报告中提供的信息代表了真实世界的数据,但必须澄清的是,调查和与MS的后续访谈都是在数据流映射方法的活动中进行的。
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引用次数: 0
Country Report of Croatia for Prevalence of Zoonoses and Pathogens business data collection 克罗地亚关于人畜共患病和病原体流行情况的国家报告商业数据收集
Pub Date : 2025-10-07 DOI: 10.2903/sp.efsa.2025.EN-9650
Nikolaos Kollaros, Konstantinos Theofilopoulos, Anna Polychroniou, Network Research Belgium (NRB) S.A.

Analysis and mapping of national data flows and processes relevant to EFSA's business data collections is a long-standing EFSA objective, originally launched with EFSA's SIGMA project in 2018-2019 and further continued with the launch of a focused activity to “Develop, pilot and document a methodology for the data flow mapping and analysis in the European Member States” in 2023. The aim of latter activity is to apply a generic methodology for the analysis of any business data collection at Member State level with the ultimate purpose for countries and EFSA to increase understanding of data flows at national level, where existing challenges rely on and what common solutions could be implemented. This report presents results from the execution of the aforementioned methodology on Croatia for the analysis of national data flows which contribute data to Prevalence of Zoonoses and Pathogens business data collection. The report contains information on the steps, participant organizations and actors, tools, systems, formats, structural and content metadata, as well as challenges and “pain points” identified in the country's internal data flows related to the collection of selected data. The presented information has been generated based on the responses submitted by the participating Member State to a survey developed in the context of the data flow mapping and analysis methodology as well as relevant discussions held in a post-survey interview with the country. Though the information presented on the current report represents real-world data, it must be clarified that the survey and the follow-up interview with the MS, have been both performed during the activity of the Data Flow Mapping methodology.

分析和绘制与欧洲食品安全局业务数据收集相关的国家数据流和流程是欧洲食品安全局的长期目标,最初是在2018-2019年与欧洲食品安全局的SIGMA项目一起启动的,并在2023年启动了一项重点活动,以“开发、试点和记录欧洲成员国数据流绘制和分析的方法”。后一项活动的目的是应用一种通用方法来分析会员国一级的任何商业数据收集,其最终目的是使各国和欧洲食品安全局增进对国家一级数据流动的了解,现有挑战依赖于国家一级,以及可以实施哪些共同解决办法。本报告介绍了在克罗地亚执行上述方法分析国家数据流的结果,这些数据流为人畜共患病和病原体流行情况的业务数据收集提供了数据。该报告包含有关步骤、参与组织和行为者、工具、系统、格式、结构和内容元数据的信息,以及在该国与收集选定数据有关的内部数据流中确定的挑战和“痛点”。所提供的资料是根据参加调查的会员国对在数据流绘图和分析方法范围内进行的调查所作的答复以及在调查后与该国进行的面谈中进行的有关讨论而产生的。虽然当前报告中提供的信息代表了真实世界的数据,但必须澄清的是,调查和与MS的后续访谈都是在数据流映射方法的活动中进行的。
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引用次数: 0
Data Flow Mapping Methodology European Summary Report 数据流映射方法欧洲摘要报告
Pub Date : 2025-10-07 DOI: 10.2903/sp.efsa.2025.EN-9654
Nikolaos Kollaros, Konstantinos Theofilopoulos, Anna Polychroniou, Network Research Belgium (NRB) S.A.

Analysis and mapping of national data flows and processes relevant to EFSA's business data collections launched with the launch of a focused activity to “Develop, pilot and document a methodology for the data flow mapping and analysis in the European Member States” in 2023. The aim of latter activity is to apply a generic methodology for the analysis of any business data collection at Member State level with the ultimate purpose for countries and EFSA to increase understanding of data flows at national level, where existing challenges rely on and what common solutions could be implemented. The results of the methodology applied for each different EFSA business data collection is included in the corresponding country reports of the Member State. Additionally, the Country Challenges and Solutions reports focused on the challenges and “pain points” identified in each respective country's internal data flows along with the proposal of possible solutions. This leads to the creation of the European Summary Report. This report is a comprehensive summary analysis document using information from data flow mapping and analysis activities conducted in European Member States (MS) according to the EFSA data flow mapping methodology as depicted in the Country Reports and Country Challenges and Solutions reports.

与欧洲食品安全局业务数据收集相关的国家数据流和流程的分析和映射,将于2023年启动一项重点活动,以“制定、试点和记录欧洲成员国数据流映射和分析的方法”。后一项活动的目的是应用一种通用方法来分析会员国一级的任何商业数据收集,其最终目的是使各国和欧洲食品安全局增进对国家一级数据流动的了解,现有挑战依赖于国家一级,以及可以实施哪些共同解决办法。欧洲食品安全局每一项不同的商业数据收集所采用的方法的结果都包括在成员国相应的国别报告中。此外,国家挑战和解决方案报告侧重于每个国家内部数据流中确定的挑战和“痛点”,并提出可能的解决方案。这导致了《欧洲概要报告》的诞生。本报告是一份综合总结分析文件,使用来自数据流映射和分析活动的信息,根据国家报告和国家挑战和解决方案报告中描述的欧洲食品安全局数据流映射方法在欧洲成员国(MS)进行。
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引用次数: 0
期刊
EFSA Supporting Publications
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