Muhammad Kamran, Petra Marschner, Aasma Parveen, Thi Hoang Ha Truong, Zhe H. Weng
Organic fertilisers enhance crop drought resilience by improving nitrogen (N) and phosphorus (P) use efficiency and soil-plant water relations. However, the underlying mechanisms governing their effects across different drought timings in wheat under sandy soils remain unclear. This 120-day controlled-environment experiment assessed how compost, sheep manure, and their combinations applied at 25 g kg−1 ameliorate wheat yield under drought (35%WHC; −10 kPa) imposed at two timings: early- (tillering, 20 DAS) and late-stage drought (heading, 60 DAS) in a sandy soil. The manure alone and combined amendments (CM50SM50 ≈ CM25SM75, ≈CM75SM25 > SM100) retained more soil moisture compared to the compost alone treatment. Compared with the control, compost and the half-half-blend with manure increased grain yield by up to 2.3-fold under early drought and only 1.4-fold under late drought. The compost-rich treatments increased root N uptake by 2.6–3.5 fold and sustained grain-based N utilisation efficiency during early drought. Manure-rich treatments showed higher P uptake, but P utilisation efficiency remained lower compared with the compost-rich treatments across drought timings. During early drought, half-half-blend increased soil organic carbon by 90%, and plant available water by 21% over the unamended control. Compost-rich treatments improved microbial N mineralisation under early drought by increasing microbial biomass nitrogen by 8.1-fold and nitrate-N by 2.4-fold. The Partial Least Squares Path Modelling analysis confirmed the relationship between field capacity, microbial activity, nutrient availability, and grain yield. Oveall, manure-rich treatments enhanced moisture retention, while compost-rich treatments balanced nutrient acquisition and utilisation by rapid P supply from manure with sustained N mineralisation from compost, enhancing wheat resilience more under early than late drought. Therefore, we recommend compost and manure combination as a potential approach to increase dryland wheat yield during early-stage droughts in sandy soils.
有机肥通过改善氮、磷利用效率和土壤-植物水分关系提高作物抗旱性。然而,控制它们在不同干旱时间对沙质土壤下小麦影响的潜在机制尚不清楚。这项为期120天的受控环境试验评估了堆肥、羊粪及其组合施用25 g kg - 1如何改善沙质土壤中干旱(35%WHC; - 10 kPa)条件下的小麦产量:早期(分蘖期,20 DAS)和后期干旱(抽穗期,60 DAS)。单独施用粪肥和复合改良剂(CM50SM50≈CM25SM75,≈CM75SM25 > SM100)比单独施用堆肥保留了更多的土壤水分。与对照相比,堆肥和半混肥在干旱早期增产2.3倍,在干旱后期增产1.4倍。富堆肥处理提高了干旱早期根系氮素吸收量2.6 ~ 3.5倍,提高了籽粒氮素的持续利用效率。富粪肥处理的磷吸收量高于富堆肥处理,但磷利用效率仍低于富堆肥处理。在干旱早期,与未处理的对照相比,半混合处理增加了90%的土壤有机碳和21%的植物有效水分。富堆肥处理改善了早期干旱条件下微生物氮矿化,使微生物生物量氮增加8.1倍,硝态氮增加2.4倍。偏最小二乘路径模型分析证实了农田容量、微生物活性、养分有效性和粮食产量之间的关系。总体而言,富粪肥处理提高了水分保持能力,而富粪肥处理通过肥料快速提供P和堆肥持续的N矿化来平衡养分获取和利用,增强了小麦在干旱早期而非后期的抗旱性。因此,我们推荐堆肥和粪肥组合作为一种潜在的方法,以提高旱地小麦产量在早期干旱的沙质土壤。
{"title":"Wheat Yield Response to Organic Fertilisers Depends on Drought Timing in a Sandy Soil","authors":"Muhammad Kamran, Petra Marschner, Aasma Parveen, Thi Hoang Ha Truong, Zhe H. Weng","doi":"10.1002/sae2.70133","DOIUrl":"https://doi.org/10.1002/sae2.70133","url":null,"abstract":"<p>Organic fertilisers enhance crop drought resilience by improving nitrogen (N) and phosphorus (P) use efficiency and soil-plant water relations. However, the underlying mechanisms governing their effects across different drought timings in wheat under sandy soils remain unclear. This 120-day controlled-environment experiment assessed how compost, sheep manure, and their combinations applied at 25 g kg<sup>−</sup><sup>1</sup> ameliorate wheat yield under drought (35%WHC; −10 kPa) imposed at two timings: early- (tillering, 20 DAS) and late-stage drought (heading, 60 DAS) in a sandy soil. The manure alone and combined amendments (CM<sub>50</sub>SM<sub>50</sub> ≈ CM<sub>25</sub>SM<sub>75,</sub> ≈CM<sub>75</sub>SM<sub>25</sub> > SM<sub>100</sub>) retained more soil moisture compared to the compost alone treatment. Compared with the control, compost and the half-half-blend with manure increased grain yield by up to 2.3-fold under early drought and only 1.4-fold under late drought. The compost-rich treatments increased root N uptake by 2.6–3.5 fold and sustained grain-based N utilisation efficiency during early drought. Manure-rich treatments showed higher P uptake, but P utilisation efficiency remained lower compared with the compost-rich treatments across drought timings. During early drought, half-half-blend increased soil organic carbon by 90%, and plant available water by 21% over the unamended control. Compost-rich treatments improved microbial N mineralisation under early drought by increasing microbial biomass nitrogen by 8.1-fold and nitrate-N by 2.4-fold. The Partial Least Squares Path Modelling analysis confirmed the relationship between field capacity, microbial activity, nutrient availability, and grain yield. Oveall, manure-rich treatments enhanced moisture retention, while compost-rich treatments balanced nutrient acquisition and utilisation by rapid P supply from manure with sustained N mineralisation from compost, enhancing wheat resilience more under early than late drought. Therefore, we recommend compost and manure combination as a potential approach to increase dryland wheat yield during early-stage droughts in sandy soils.</p>","PeriodicalId":100834,"journal":{"name":"Journal of Sustainable Agriculture and Environment","volume":"5 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2026-01-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/sae2.70133","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146096602","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Xiaoxiao Zheng, Fengjie Cheng, Shuyu Li, Rou Xia, Yutong Sun, Yuwen Wang, Wen Zhai, Jun Chen, Jie Xiong, Ge Ding, Bingchao Zhang, Laiqiang Song, Lunlin Chen
Silique number is an important yield trait in rapeseed. Identifying the genetic loci and analyzing the molecular mechanism of this trait are of great significance for increasing rapeseed yield. In this study, we conducted a quantitative trait loci (QTL) analysis for silique number using a recombinant inbred line (RIL) population, and detected seven QTLs for silique number across two environments, explaining 5.97%–9.05% of the phenotypic variation. The transcriptome sequencing analysis of extreme lines with more silique and less silique showed sulfur and glycosyl compounds metabolism is crucial for flower bud differentiation in shoot apical meristem (SAM) of rapeseed. By integrating the QTL mapping results with transcriptome data, we identified four candidate genes involved in regulating silique number, including BnaA06g27290D, BnaA06g27360D, BnaC06g10070D and BnaC06g10100D. The findings not only enhance the understanding of the genetic and molecular basis of silique formation but also provide valuable genetic loci and gene resources for molecular breeding aimed at yield improvement in rapeseed.
{"title":"QTL Mapping Combined With Transcriptome Analysis to Identify Candidate Genes for Silique Number in Rapeseed","authors":"Xiaoxiao Zheng, Fengjie Cheng, Shuyu Li, Rou Xia, Yutong Sun, Yuwen Wang, Wen Zhai, Jun Chen, Jie Xiong, Ge Ding, Bingchao Zhang, Laiqiang Song, Lunlin Chen","doi":"10.1002/sae2.70131","DOIUrl":"https://doi.org/10.1002/sae2.70131","url":null,"abstract":"<p>Silique number is an important yield trait in rapeseed. Identifying the genetic loci and analyzing the molecular mechanism of this trait are of great significance for increasing rapeseed yield. In this study, we conducted a quantitative trait loci (QTL) analysis for silique number using a recombinant inbred line (RIL) population, and detected seven QTLs for silique number across two environments, explaining 5.97%–9.05% of the phenotypic variation. The transcriptome sequencing analysis of extreme lines with more silique and less silique showed sulfur and glycosyl compounds metabolism is crucial for flower bud differentiation in shoot apical meristem (SAM) of rapeseed. By integrating the QTL mapping results with transcriptome data, we identified four candidate genes involved in regulating silique number, including <i>BnaA06g27290D, BnaA06g27360D, BnaC06g10070D and BnaC06g10100D</i>. The findings not only enhance the understanding of the genetic and molecular basis of silique formation but also provide valuable genetic loci and gene resources for molecular breeding aimed at yield improvement in rapeseed.</p>","PeriodicalId":100834,"journal":{"name":"Journal of Sustainable Agriculture and Environment","volume":"5 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2026-01-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/sae2.70131","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146016282","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Md Belal Hossain, Ketema Zeleke, De Li Liu, K. M. Shamsul Haque, Bin Wang
Assessing the impact of climate change is crucial for addressing the challenges of sustaining and increasing rice production. This study employed the APSIM model driven by climate data from 27 global climate models under SSP245 and SSP585 emission scenarios to evaluate climate change effects on irrigated and rainfed rice in three key rice-growing regions (Rangpur, Bogura, and Rajshahi) in northwest Bangladesh. Relative changes in climate variables, rice yield, and yield components were analysed for the near future (NF: 2031–2065) and far future (FF: 2066–2100), compared to a baseline period (1988–2022). Results indicate a substantial increase in temperature during FF under the SSP585 scenario, with maximum temperature rising by up to 3.3°C (3.1°C) and minimum temperature up to 3.7°C (3.3°C) during irrigated (rainfed) rice seasons. This increase could shorten the growth period of irrigated and rainfed rice by up to 18 days and 10 days, respectively, under SSP585. Rice yields were projected to increase in the NF by up to 14.7% (irrigated) and 6.5% (rainfed) under SSP245. However, yields were expected to decline in the FF by 21% (irrigated) and 11% (rainfed) under SSP585 scenario. These projected yield changes are primarily explained by variations in spikelet number (NSP) and spikelet fertility (SPFERT) across locations. While projected climate conditions enhance NSP by 22% (irrigated) and 11% (rainfed) due to increased CO2 concentration and solar radiation, SPFERT was projected to decline sharply, by up to 47% and 35% in irrigated and rainfed rice seasons, respectively, in the FF under SSP585. The change in SPFERT was largely attributed to the change in elevated maximum temperatures during the anthesis period across the locations. While yields may increase in NF, an adaptation strategy is needed to sustain rice production during far future in Bangladesh.
{"title":"Modelling Climate Change Impact on Rice Growth and Yield in Northwest Bangladesh","authors":"Md Belal Hossain, Ketema Zeleke, De Li Liu, K. M. Shamsul Haque, Bin Wang","doi":"10.1002/sae2.70116","DOIUrl":"https://doi.org/10.1002/sae2.70116","url":null,"abstract":"<p>Assessing the impact of climate change is crucial for addressing the challenges of sustaining and increasing rice production. This study employed the APSIM model driven by climate data from 27 global climate models under SSP245 and SSP585 emission scenarios to evaluate climate change effects on irrigated and rainfed rice in three key rice-growing regions (Rangpur, Bogura, and Rajshahi) in northwest Bangladesh. Relative changes in climate variables, rice yield, and yield components were analysed for the near future (NF: 2031–2065) and far future (FF: 2066–2100), compared to a baseline period (1988–2022). Results indicate a substantial increase in temperature during FF under the SSP585 scenario, with maximum temperature rising by up to 3.3°C (3.1°C) and minimum temperature up to 3.7°C (3.3°C) during irrigated (rainfed) rice seasons. This increase could shorten the growth period of irrigated and rainfed rice by up to 18 days and 10 days, respectively, under SSP585. Rice yields were projected to increase in the NF by up to 14.7% (irrigated) and 6.5% (rainfed) under SSP245. However, yields were expected to decline in the FF by 21% (irrigated) and 11% (rainfed) under SSP585 scenario. These projected yield changes are primarily explained by variations in spikelet number (NSP) and spikelet fertility (SPFERT) across locations. While projected climate conditions enhance NSP by 22% (irrigated) and 11% (rainfed) due to increased CO<sub>2</sub> concentration and solar radiation, SPFERT was projected to decline sharply, by up to 47% and 35% in irrigated and rainfed rice seasons, respectively, in the FF under SSP585. The change in SPFERT was largely attributed to the change in elevated maximum temperatures during the anthesis period across the locations. While yields may increase in NF, an adaptation strategy is needed to sustain rice production during far future in Bangladesh.</p>","PeriodicalId":100834,"journal":{"name":"Journal of Sustainable Agriculture and Environment","volume":"5 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2026-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/sae2.70116","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146002466","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Plant microorganisms are an essential component of the host and perform critical functions in plant development and health. Emerging evidence shows that plants use their root exudates to recruit beneficial microbes that protect them against abiotic and biotic stresses, including diseases. However, the metabolic responses of plant under pathogen infection remain underexplored. In this study, using a manipulative experiment, we employed amplicon sequencing and untargeted metabolomics to investigate the response of rhizosphere microbial communities and metabolites of root exudates to potato-wilt disease caused by Ralstonia solanacearum (RS) across two developmental stages (vegetative and tuber bulking). Our results revealed that β-diversity showed distinct shifts in bacterial and fungal communities between healthy and diseased plants. Higher relative abundance of bacterial taxa from genera, Bradyrhizobium, Cadidatus, Paenibacillus and the fungal genus Terramyces were observed in the rhizosphere of healthy plants. Similarly, Burkholderia spp and the fungal Apiotrichum spp dominated the rhizosphere of diseased plants across the developmental stages. Further compared to healthy plants, microbial functional potentials and metabolomic profiles of root exudates linked to pathogen resistance were significantly enhanced in diseased plants. Particularly, metabolites from alkaloids, triterpenoids and polyketides were enriched in disease plants and exhibited associations with microbial groups known to influence host immunity, nutrient acquisition and stress adaptation. We observed that variations in disease index were associated with the identified enriched metabolites. Our integrative analysis provides evidence for multifaceted signalling, sensing between plants, pathogens and beneficial microbiota that may shape plant health status and microbiome assembly under pathogen pressure. These insights not only advance our understanding of crop pathophysiology but also lay the foundation for developing targeted biological strategies or metabolic markers for early disease detection and sustainable crop protection.
{"title":"Responses of Root Microbiome and Metabolome Are Linked to Crop Disease Severity","authors":"Ayomide Emmanuel Fadiji, Brajesh K. Singh","doi":"10.1002/sae2.70129","DOIUrl":"https://doi.org/10.1002/sae2.70129","url":null,"abstract":"<p>Plant microorganisms are an essential component of the host and perform critical functions in plant development and health. Emerging evidence shows that plants use their root exudates to recruit beneficial microbes that protect them against abiotic and biotic stresses, including diseases. However, the metabolic responses of plant under pathogen infection remain underexplored. In this study, using a manipulative experiment, we employed amplicon sequencing and untargeted metabolomics to investigate the response of rhizosphere microbial communities and metabolites of root exudates to potato-wilt disease caused by <i>Ralstonia solanacearum</i> (RS) across two developmental stages (vegetative and tuber bulking). Our results revealed that β-diversity showed distinct shifts in bacterial and fungal communities between healthy and diseased plants. Higher relative abundance of bacterial taxa from genera, <i>Bradyrhizobium, Cadidatus, Paenibacillus</i> and the fungal genus <i>Terramyces</i> were observed in the rhizosphere of healthy plants. Similarly, <i>Burkholderia</i> spp and the fungal <i>Apiotrichum</i> spp dominated the rhizosphere of diseased plants across the developmental stages. Further compared to healthy plants, microbial functional potentials and metabolomic profiles of root exudates linked to pathogen resistance were significantly enhanced in diseased plants. Particularly, metabolites from alkaloids, triterpenoids and polyketides were enriched in disease plants and exhibited associations with microbial groups known to influence host immunity, nutrient acquisition and stress adaptation. We observed that variations in disease index were associated with the identified enriched metabolites. Our integrative analysis provides evidence for multifaceted signalling, sensing between plants, pathogens and beneficial microbiota that may shape plant health status and microbiome assembly under pathogen pressure. These insights not only advance our understanding of crop pathophysiology but also lay the foundation for developing targeted biological strategies or metabolic markers for early disease detection and sustainable crop protection.</p>","PeriodicalId":100834,"journal":{"name":"Journal of Sustainable Agriculture and Environment","volume":"5 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2026-01-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/sae2.70129","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146002086","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Lekshmy V. Sankarapillai, Kambham Raja Reddy, Krishna N. Reddy, Raju Bheemanahalli
The increasing frequency and unpredictability of adverse growing conditions pose significant challenges to crop productivity and ecosystem sustainability. Early-stage vigour strongly influences crop establishment and yield potential, making it essential to understand sorghum responses for developing resilient cultivars. This study examined physiological, morphological and biomass responses of 12 grain sorghum hybrids/inbreds to high temperature (HT), low temperature (LT), drought (DS), salinity (SS), low nitrogen (LN) and elevated CO2 (eCO2) comapred to control (CNT). Stomatal and non-stomatal traits were assessed to determine their contribution to early growth performance. LT emerged as the most detrimental stress, causing the largest reductions in above-ground biomass (76%) and canopy temperature regulation, while HT, SS, DS and LN also negatively affected shoot growth to varying degrees (> 20%). DS increased root biomass, whereas LT suppressed both shoot and root biomass. In contrast, eCO2 had a minimal impact, with traits remaining largely comparable to those in CNT. Genotypes responses varied with stress: inbred SC35 maintained tolerance across multiple stresses, while RTx430 and LGS06B19 were highly susceptible. These results demonstrate that abiotic stresses significantly constrain early sorghum growth and development, with LT (chilling) being the most limiting factor. Identifying and using genotypes with broad early-stage stress tolerance, such as SC35, will accelerate development of stress-resilient cultivars under increasingly unpredictable growing conditions. Future work on combined stress effects is essential for developing multi-stress resilient sorghum.
{"title":"Physiological and Morphological Responses of Grain Sorghum to Varying Temperature, Irrigation and Carbon Dioxide Levels","authors":"Lekshmy V. Sankarapillai, Kambham Raja Reddy, Krishna N. Reddy, Raju Bheemanahalli","doi":"10.1002/sae2.70123","DOIUrl":"https://doi.org/10.1002/sae2.70123","url":null,"abstract":"<p>The increasing frequency and unpredictability of adverse growing conditions pose significant challenges to crop productivity and ecosystem sustainability. Early-stage vigour strongly influences crop establishment and yield potential, making it essential to understand sorghum responses for developing resilient cultivars. This study examined physiological, morphological and biomass responses of 12 grain sorghum hybrids/inbreds to high temperature (HT), low temperature (LT), drought (DS), salinity (SS), low nitrogen (LN) and elevated CO<sub>2</sub> (eCO<sub>2</sub>) comapred to control (CNT). Stomatal and non-stomatal traits were assessed to determine their contribution to early growth performance. LT emerged as the most detrimental stress, causing the largest reductions in above-ground biomass (76%) and canopy temperature regulation, while HT, SS, DS and LN also negatively affected shoot growth to varying degrees (> 20%). DS increased root biomass, whereas LT suppressed both shoot and root biomass. In contrast, eCO<sub>2</sub> had a minimal impact, with traits remaining largely comparable to those in CNT. Genotypes responses varied with stress: inbred SC35 maintained tolerance across multiple stresses, while RTx430 and LGS06B19 were highly susceptible. These results demonstrate that abiotic stresses significantly constrain early sorghum growth and development, with LT (chilling) being the most limiting factor. Identifying and using genotypes with broad early-stage stress tolerance, such as SC35, will accelerate development of stress-resilient cultivars under increasingly unpredictable growing conditions. Future work on combined stress effects is essential for developing multi-stress resilient sorghum.</p>","PeriodicalId":100834,"journal":{"name":"Journal of Sustainable Agriculture and Environment","volume":"5 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2026-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/sae2.70123","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145909086","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}