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Analysis of the nearly full-length genome of a novel HIV-1 CRF01_AE/B/C recombinant strain isolated in Yunnan Province 云南分离的一株新的HIV-1 CRF01_AE/B/C重组株的近全长基因组分析
Q4 Immunology and Microbiology Pub Date : 2019-08-31 DOI: 10.3760/CMA.J.ISSN.0254-5101.2019.08.007
Jia-fa Liu, Mi Zhang, Bihui Yang, Xuemei Deng, A. Sun, Suyun Lei
Objective To analyze the genetic structure and recombination characteristics of a newly discovered HIV-1 unique recombinant strain in Yunnan Province. Methods During a test for drug-resistant HIV genotypes in Yunnan Province in 2016, a recombinant fragment was found in the pol region of a HIV-1 strain isolated from a patient. Two overlapping segments of the HIV-1 genome were amplified by RT-PCR, and then the products were sequenced. Recombination analysis was performed using RIP, jpHMM and SimPlot3.5 software. A phylogenetic tree was constructed for homology analysis by Neighbor-joining method using MEGA6.06 software. Results A nearly full-length HIV-1 gene sequence with 8 590 bp in length was obtained. Breakpoint analysis indicated that the sequence consisted of CRF01_AE and fragments of B and C subtypes. CRF01_AE was used as the backbone with B and C subtype fragments inserted. The positions were 791 to 1 171 for CRF01_AE, 1 172 to 2 652 for C subtype fragment, 2 653 to 2 977 for B subtype fragment, and 2 978 to 9 380 for CRF01_AE using HIV-1 HXB2 as the reference strain. Conclusions Some new strains formed by cross-recombination of CRF01_AE and B and C subtypes were discovered in Yunnan Province in recent years. It was found that the recombination pattern of the newly discovered strain was complex, suggesting that close attention should be paid to the changes in epidemic trends, which was of great importance to understand the current prevalence and epidemic trends of HIV-1. Key words: Human immunodeficiency virus type 1; Unique recombinant form; Near-full-length gene sequence analysis
目的分析云南省新发现的HIV-1独特重组株的遗传结构和重组特性。方法在云南省2016年的一次HIV耐药基因型检测中,从一名患者身上分离到一株HIV-1毒株的pol区发现一个重组片段。通过RT-PCR扩增HIV-1基因组的两个重叠片段,然后对产物进行测序。使用RIP、jpHMM和SimPlot3.5软件进行重组分析。使用MEGA6.06软件,通过邻居连接法构建系统发育树进行同源性分析。结果获得了全长8 590 bp的HIV-1基因序列。断点分析表明,该序列由CRF01_AE和B、C亚型片段组成。以CRF01_AE为骨架,插入B和C亚型片段。使用HIV-1HXB2作为参考菌株,CRF01_AE的位置为791-1 171,C亚型片段的位置为1 172-2 652,B亚型片段为2 653-2 977,CRF01TE的位置为2 978-9 380。结论云南省近年来发现了一些由CRF01_AE与B、C亚型交叉重组形成的新菌株。研究发现,新发现的毒株重组模式复杂,提示应密切关注流行趋势的变化,这对了解当前HIV-1的流行情况和流行趋势具有重要意义。关键词:人类免疫缺陷病毒1型;独特的重组形式;近全长基因序列分析
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引用次数: 0
Progress in norovirus research and vaccine development 诺如病毒研究和疫苗开发进展
Q4 Immunology and Microbiology Pub Date : 2019-08-31 DOI: 10.3760/CMA.J.ISSN.0254-5101.2019.08.011
Yanan Hou
Norovirus is one of the leading causes of acute non-bacterial gastroenteritis. Emergence of new genotypes due to frequent genetic recombination and antigenic drift increases the prevalence of norovirus infection worldwide. Norovirus infection has become a global public health concern. This review focused on disease burden, vaccine research, cell culture and animal models regarding norovirus infection. Key words: Norovirus; Gastroenteritis; Vaccine
诺如病毒是导致急性非细菌性肠胃炎的主要原因之一。由于频繁的基因重组和抗原漂移,新基因型的出现增加了全球诺如病毒感染的流行率。诺如病毒感染已成为全球公共卫生关注的问题。本文综述了诺如病毒感染的疾病负担、疫苗研究、细胞培养和动物模型。关键词:诺如病毒;胃肠炎;疫苗
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引用次数: 0
Analysis of genomic characteristics and virulence factors of emetic-type Bacillus cereus strains isolated in Hangzhou 杭州地区吐吐型蜡样芽孢杆菌基因组特征及毒力因子分析
Q4 Immunology and Microbiology Pub Date : 2019-08-31 DOI: 10.3760/CMA.J.ISSN.0254-5101.2019.08.002
Xiaodong Liu, Haoqiu Wang, X. Lou, W. Zheng, Zhibei Zheng, Tao Liu, Wei Zhang, Qi Chen, Shi Cheng
Objective To investigate the genomic characteristics and virulence factors of emetic-type Bacillus cereus strains isolated from food in Hangzhou for better understanding their pathogenic potential. Methods Real-time PCR was performed to detect the ces gene cluster (cereulide) in 132 Bacillus cereus strains isolated from food from 2015 to 2017. Genomes of cereulide-positive strains were sequenced using Illumina MiSeq sequencing platform. Genome annotation, virulence factor detection, comparative and evolutionary analysis were performed after the sequences of genomes were assembled. Results Twelve strains (9.09%) carried the ces gene. Their genome sizes ranged from 5.35 to 5.75 Mb and GC contents from 35.25 to 35.43 mol%. All of them harbored the full cereulide biosynthesis gene cluster, nonhemolytic enterotoxin (NHE)-encoding gene cluster (nheA, nheB and nheC) and hemolysin Ⅲ (hlyⅢ). The average nucleotide identity (ANI) between the 12 isolates and the reference strain NC7401 (Accession number: AP007209) was over 99.35%. Phylogenetic analysis demonstrated these strains were clustered into the same branch with local clinical isolates and the emetic-type Bacillus cereus strains of NC7401 and AH187. Conclusions The genomic sequences of the emetic-type Bacillus cereus strains isolated from food in Hangzhou area were highly similar to that of the reference strain NC7401. Results of the genomic analysis suggested that these isolates carried many virulence factors that were related to pathogenicity. Key words: Bacillus cereus; Genome sequencing; Virulence factor; Genomic analysis
目的研究杭州地区食物中呕吐型蜡样芽孢杆菌菌株的基因组特征和毒力因子,以更好地了解其致病潜力。方法采用实时PCR方法对2015~2017年从食品中分离的132株蜡样芽孢杆菌进行ces基因簇(cereulide)检测。使用Illumina MiSeq测序平台对蜡样蛋白阳性菌株的基因组进行测序。在组装基因组序列后进行基因组注释、毒力因子检测、比较和进化分析。结果12株(9.09%)携带ces基因。它们的基因组大小在5.35至5.75Mb之间,GC含量在35.25至35.43mol%之间。它们均携带完整的蜡样蛋白生物合成基因簇、非溶血性肠毒素(NHE)编码基因簇(nheA、nheB和nheC)和溶血素Ⅲ(hlyⅢ)。12株菌株与参考菌株NC7401(登录号:AP007209)的平均核苷酸同一性(ANI)超过99.35%。系统发育分析表明,这些菌株与NC7401和AH187的本地临床分离株和呕吐型蜡样芽孢杆菌菌株聚为同一分支。结论杭州地区从食品中分离到的呕吐型蜡样芽孢杆菌菌株与参考菌株NC7401的基因组序列高度相似。基因组分析结果表明,这些分离株携带许多与致病性有关的毒力因子。关键词:蜡样芽孢杆菌;基因组测序;毒力因子;基因组分析
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引用次数: 0
Molecular characteristics of qnrS1-positive Escherichia coli resistant to quinolone qnrS1阳性大肠杆菌对喹诺酮类药物耐药性的分子特征
Q4 Immunology and Microbiology Pub Date : 2019-08-31 DOI: 10.3760/CMA.J.ISSN.0254-5101.2019.08.001
Jiangqing Huang, Zhi-chang Zhao, Yao Chen, Yingping Cao, Bin Li
Objective To analyze the molecular characteristics of qnrS-positive Escherichia coli (E.coli) strains resistant to quinolone. Methods A total of 57 qnrS1-positive clinical isolates were collected from Fujian Medical University Union Hospital. Plasmid-mediated quinolone resistance (PMQR) genes [qnrA, qnrB, qnrC, qnrD, aac(6′)-Ib-cr, qepA and oqxAB] and β-lactamase genes (blaCTX-M-1, blaCTX-M-2, blaCTX-M-8, blaCTX-M-9, blaSHV and blaTEM) were detected by PCR and then sequenced. Agar dilution method was used to analyze the antimicrobial susceptibility of the qnrS1-positive strains. Phylogenetic analysis was conducted using PCR. Multilocus sequence typing (MLST) was performed for phenotyping. Enterobacterial repetitive intergenic consensus-polymerase chain reaction (ERIC-PCR) was used to evaluate the genetic similarity between those isolates. Transferability of the qnrS1 genes carried by the 57 strains was examined by conjugation test with the sodiumazide-resistant E. coli J53 as the recipient strain. Mutations in the quinolone resistance-determining regions (QRDR) in those strains were analyzed by PCR. Results All of the qnrS1-positive E. coli strains showed high resistance to quinolones. PMQR genes were harbored by 14 (24.6%) isolates. Extended spectrum β-lactamases (ESBLs)-producing isolates accounted for 68.4%. Mutations in the QRDR of gyrA, gyrB, parC and parE genes were found in 56 (98.2%) strains and the most frequent point mutations were S83L (89.5%) in gyrA gene, S80I (54.4%) in parC gene and P415V (28.1%) in parE gene. The qnrS1 gene was successful transferred from 13 (22.8%) isolates to E. coli J53 by conjugation. Five plasmid incompatibility groups were detected. Phylogenetic analysis showed that there were 36 (63.2%), 13 (22.8%), 1 (1.8%) and 7 (12.3%) isolates belonging to groups A, B1, B2 and D, respectively. The 57 qnrS1-positive E. coli strains were assigned to 50 ERIC types and 39 sequence types (ST) based on the results of ERIC-PCR and MLST. Conclusions Mutations in the QRDR in E. coli strains were associated with qnrS1 gene and might play a critical role in the dissemination of quinolone-resistant bacteria. Key words: qnrS; Escherichia coli; Quinolone resistance; Plasmid-mediated quinolone resistance; Quinolone resistance-determining region
目的分析qnrS阳性大肠杆菌对喹诺酮类药物耐药的分子特征。方法从福建医科大学附属协和医院采集57株qnrS1阳性临床分离株。通过PCR检测质粒介导的喹诺酮耐药性(PMQR)基因[qnrA、qnrB、qnrC、qnrD、aac(6′)-Ib-cr、qepA和oqxAB]和β-内酰胺酶基因(blaCTX-M-1、blaCTX-M-2、blaCTX-M-8、blaCTX-M-9、blaSHV和blaTEM),然后进行测序。采用琼脂稀释法对qnrS1阳性菌株的耐药性进行分析。利用聚合酶链式反应进行系统发育分析。进行多基因座序列分型(MLST)进行表型分析。采用肠杆菌重复基因间共有聚合酶链式反应(ERIC-PCR)评价分离株之间的遗传相似性。以耐叠氮化钠大肠杆菌J53为受体菌株,通过偶联试验检测了57株菌株携带的qnrS1基因的可转移性。通过聚合酶链式反应分析这些菌株的喹诺酮耐药性决定区(QRDR)的突变。结果所有qnrS1阳性大肠杆菌对喹诺酮类药物均表现出较高的耐药性。14株(24.6%)分离株携带PMQR基因。产超广谱β-内酰胺酶(ESBLs)的菌株占68.4%,56株(98.2%)发现gyrA、gyrB、parC和parE基因的QRDR突变,最常见的点突变是gyrA基因的S83L(89.5%)、parC基因的S80I(54.4%)和parE基因的P415V(28.1%)。qnrS1基因从13个(22.8%)分离株中通过偶联成功地转移到大肠杆菌J53中。检测到5个质粒不亲和群。系统发育分析表明,共有36株(63.2%)、13株(22.8%)、1株(1.8%)和7株(12.3%)分离株分别属于A、B1、B2和D组。根据ERIC-PCR和MLST的结果,将57株qnrS1阳性大肠杆菌分为50个ERIC型和39个序列型(ST)。结论大肠杆菌QRDR基因突变与qnrS1基因有关,可能在喹诺酮耐药菌的传播中起重要作用。关键词:qnrS;大肠杆菌;喹诺酮类耐药性;质粒介导的喹诺酮耐药性;喹诺酮类耐药性决定区
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引用次数: 0
Calcitonin gene-related peptide down-regulates the inflammatory response induced by lipopolysaccharide of Klebsiella pneumoniae 降钙素基因相关肽下调肺炎克雷伯菌脂多糖诱导的炎症反应
Q4 Immunology and Microbiology Pub Date : 2019-08-31 DOI: 10.3760/CMA.J.ISSN.0254-5101.2019.08.003
Xiaoxia Li, H. Lu, Zhiqun Zhang, G. Zhuo
Objective To investigate the effects of calcitonin gene-related peptide (CGRP) on the inflammatory response induced by lipopolysaccharide (LPS) of Klebsiella pneumoniae. Methods Klebsiella pneumoniae was cultured in vitro to extracted LPS. Different concentrations of LPS were used to stimulate BEAS-2B cells. The activation of human β defensin 2 (hBD-2) in these cells was detected by immunofluorescence assay before and after adding different concentrations of CGRP. MTT assay and flow cytometry were respectively used to detect the proliferation and apoptosis of BEAS-2B cells after LPS stimulation with and without CGRP treatment. Neutrophil granules released in the cells after CGRP treatment were detected using neutrophil gelatinase-related apolipoprotein (NGAL) as the marker. Results Immunofluorescence assay results showed that LPS at different concentrations could significantly increase the relative expression of hBD-2 in BEAS-2B cells, which was significantly inhibit by CGRP intervention. LPS at 50 ng/ml, 100 ng/ml and 200 ng/ml had no significant effect on the activity of BEAS-2B cells, while treatment with 400 ng/ml of LPS for 24 h could significantly reduce the activity and promote the apoptosis of BEAS-2B cells. In addition, remarkedly increased cell activity and suppressed cell apoptosis were induced when BEAS-2B cells were treated with 10 nmol/L of CGRP in combination with LPS. LPS at different concentrations could induce the release of neutrophil-specific granules, while the LPS-induce release could be significantly inhibited by 10 nmol/L of CGRP. Conclusions CGRP could inhibit the expression of hBD-2, promote cell proliferation and reduce the degranulation of neutrophils to down-regulate the inflammatory response induced by LPS of Klebsiella pneumoniae. Key words: Klebsiella pneumoniae; Calcitonin gene-related peptide; βdefensin; Inflammatory response
目的探讨降钙素基因相关肽(CGRP)对肺炎克雷伯菌脂多糖(LPS)诱导的炎症反应的影响。方法体外培养肺炎克雷伯菌提取脂多糖。用不同浓度的LPS刺激BEAS-2B细胞。采用免疫荧光法检测不同浓度CGRP前后人β防御素2 (hBD-2)在这些细胞中的活化情况。采用MTT法和流式细胞术分别检测CGRP处理和不处理LPS刺激后BEAS-2B细胞的增殖和凋亡情况。以中性粒细胞明胶酶相关载脂蛋白(NGAL)为标记物,检测CGRP处理后细胞中释放的中性粒细胞颗粒。结果免疫荧光分析结果显示,不同浓度的LPS均能显著提高BEAS-2B细胞中hBD-2的相对表达,而CGRP干预能显著抑制hBD-2的相对表达。50 ng/ml、100 ng/ml和200 ng/ml LPS对BEAS-2B细胞活性无显著影响,而400 ng/ml LPS处理24 h可显著降低BEAS-2B细胞活性,促进细胞凋亡。另外,10 nmol/L CGRP与LPS联合作用于BEAS-2B细胞后,细胞活性再次明显增强,细胞凋亡受到抑制。不同浓度的LPS均可诱导中性粒细胞特异性颗粒的释放,而10 nmol/L的CGRP可显著抑制LPS诱导的释放。结论CGRP可抑制hBD-2的表达,促进细胞增殖,减少中性粒细胞的脱粒,从而下调LPS诱导的肺炎克雷伯菌炎症反应。关键词:肺炎克雷伯菌;降钙素基因相关肽;βdefensin;炎症反应
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引用次数: 0
Eukaryotic expression and serodiagnostic potential of HIV-1 p24 antigen hiv - 1p24抗原的真核表达和血清诊断潜力
Q4 Immunology and Microbiology Pub Date : 2019-08-31 DOI: 10.3760/CMA.J.ISSN.0254-5101.2019.08.005
Wei-Zheng Song, Xiangyu Chen, Y. Shao, Y. Hao, Ying Wang
Objective To express HIV-1 capsid p24 antigen in an eukaryotic expression system and to evaluate its antigenicity and potential in the early diagnosis of HIV. Methods The full-length gene of HIV-1 p24 and the signal peptide DRVI gene were amplified by PCR. The signal peptide DRVI preceding the p24 gene was introduced using fusion PCR, and cloned into vector pDRVI1.0. Two recombinant plasmids pDRVI-p24 and pDRVI-p24s were constructed and transfected into 293F cells. Expression and secretion of p24 protein were detected by SDS-PAGE, Ni-NTA column chromatography and molecular sieve were used to purify p24s protein. The purified protein was identified by Western blot and indirect ELISA using human/mouse HIV-1-positive serum samples. Results The eukaryotic expression system for HIV-1 p24 antigen was successfully established with high efficiency. The target protein of interest with the signal peptide DRVI was obviously detected in the supernatants of cell culture. The recombinant protein had good specificity and sensitivity based on the results of serological tests using serum samples of five HIV-1-positive and five HIV-negative mice, 30 HIV-1-positive patients and 50 HIV-1-negative healthy individuals. Conclusions The eukaryotic expression system for HIV-1 p24 antigen was successfully established. The purified HIV-1 p24s antigen had good antigenicity. An indirect ELISA assay with good specificity and sensitivity for the detection of HIV-1 was preliminarily constructed and showed great potential for application. Key words: HIV-1; p24 core antigen; Eukaryotic expression; Serological diagnosis
目的在真核表达系统中表达HIV-1衣壳p24抗原,评价其抗原性及其在HIV早期诊断中的应用价值。方法采用PCR扩增HIV-1 p24全长基因和信号肽DRVI基因。采用融合PCR法将p24基因前的信号肽DRVI导入到pDRVI1.0载体中。构建重组质粒pDRVI-p24和pDRVI-p24s,并转染293F细胞。采用SDS-PAGE检测p24蛋白的表达和分泌情况,采用Ni-NTA柱层析和分子筛分离纯化p24s蛋白。利用人/小鼠hiv -1阳性血清样品,采用Western blot和间接ELISA方法对纯化蛋白进行鉴定。结果成功建立了HIV-1 p24抗原的真核表达体系。在细胞培养的上清液中明显检测到与信号肽DRVI相关的目标蛋白。利用5只hiv -1阳性和5只hiv -1阴性小鼠、30例hiv -1阳性患者和50例hiv -1阴性健康人的血清样本进行血清学检测,结果表明重组蛋白具有良好的特异性和敏感性。结论成功建立了hiv - 1p24抗原真核表达体系。纯化的HIV-1 p24s抗原具有良好的抗原性。初步构建了一种特异性和敏感性较好的间接ELISA检测HIV-1的方法,具有较大的应用潜力。关键词:HIV-1;P24核心抗原;真核表达;血清学诊断
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引用次数: 0
Glaucocalyxin A regulates STAT3 signaling pathway through influencing IL-6 expression in HCCLM3 cells 青萼素A通过影响IL-6在HCCLM3细胞中的表达调控STAT3信号通路
Q4 Immunology and Microbiology Pub Date : 2019-08-31 DOI: 10.3760/CMA.J.ISSN.0254-5101.2019.08.008
Linlin Zhu, Zhixuan Xu, Mingming Zhang
Objective To investigate the effects of glaucocalyxin A (GLA) on the expression of signal transduction and activator of transcription 3 (STAT3) signaling pathway in HCCLM3 cells for better understanding the role of GLA in tumor metastasis. Methods HCCLM3 cells were stimulated by different concentrations (0.1 ng/ml, 1 ng/ml, 10 ng/ml, 100 ng/ml and 1 000 ng/ml) of GLA for 48 h. Expression of IL-6, STAT3/pSTAT3Tyr705 and MMP9 at mRNA and protein levels were detected by qRT-PCR and Western blot, respectively. Transwell invasion and migration assays were performed to analyze cell invasion and migration. ELISA was used to measure the concentrations of IL-6 in culture media. Results Expression of IL-6 at mRNA and protein levels, STAT3Tyr705 phosphorylation, and the migration and invasion of HCCLM3 cells were significantly enhanced after stimulation of HCCLM3 cells with 0.1 ng/ml of GLA, but inhibited by GLA at the concentration of 1 000 ng/ml. Moreover, more IL-6 was secreted out of the HCCLM3 cells treated with 0.1 ng/ml of GLA. Conclusions GLA might affect the metastasis of HCCLM3 cells through regulating the expression of IL-6 and the phosphorylation of STAT3Tyr705. These regulatory effects were closely related to the concentration of GLA. Key words: Glaucocalyxin A; Interleukin-6; Signal transduction and activator of transcription 3; Hepatocarcinoma
目的探讨青光素A (glaucocalyxin A, GLA)对HCCLM3细胞信号转导及转录激活因子3 (STAT3)信号通路表达的影响,进一步了解GLA在肿瘤转移中的作用。方法用不同浓度的GLA (0.1 ng/ml、1 ng/ml、10 ng/ml、100 ng/ml、1 000 ng/ml)刺激HCCLM3细胞48 h,分别用qRT-PCR和Western blot检测IL-6、STAT3/pSTAT3Tyr705和MMP9 mRNA和蛋白水平的表达。Transwell侵袭和迁移实验分析细胞的侵袭和迁移。ELISA法测定培养基中IL-6的浓度。结果0.1 ng/ml GLA刺激HCCLM3细胞后,IL-6在mRNA和蛋白水平的表达、STAT3Tyr705的磷酸化、HCCLM3细胞的迁移和侵袭能力均显著增强,而1 000 ng/ml GLA对其有抑制作用。此外,0.1 ng/ml GLA处理的HCCLM3细胞分泌更多的IL-6。结论GLA可能通过调节IL-6的表达和STAT3Tyr705的磷酸化来影响HCCLM3细胞的转移。这些调节作用与GLA浓度密切相关。关键词:青萼新A;白细胞介素- 6;信号转导和转录激活因子3;肝癌
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引用次数: 0
Advance in Shiga toxin 志贺毒素研究进展
Q4 Immunology and Microbiology Pub Date : 2019-08-31 DOI: 10.3760/CMA.J.ISSN.0254-5101.2019.08.012
Xi Yang, X. Bai, Yan-mei Xu
Shiga toxin (Stx), which can be divided into Shiga toxin 1 (Stx1) and Shiga toxin 2 (Stx2), is an important virulence factor of Shigella spp. and certain strains of Escherichia coli. Stx, encoded by λ-like phage, blocks protein synthesis through removal of an adenine residue from the 28S rRNA. Stx can also induce apoptosis through multiple pathways. Humans may suffer from diarrhea, hemorrhagic colitis (HC) and hemolytic uremic syndrome (HUS) and even death when infected with Shiga toxin-producing bacteria. At present, there is no specific treatment for diseases caused by Stx. In recent years, the application of Stx in cancer therapy and imaging has aroused great interest. This review provided a brief overview of Stx in its nomenclature, typing, structure, genetics, pathogenesis and application perspectives. Key words: Shiga toxin; Shigella dysenteriae; Shiga toxin-producing Escherichia coli; λ-like phage
志贺毒素(Stx)是志贺菌和某些大肠杆菌的重要毒力因子,可分为志贺毒素1(Stx1)和志贺毒素2(Stx2)。Stx由λ样噬菌体编码,通过从28S rRNA中去除腺嘌呤残基来阻断蛋白质合成。Stx还可以通过多种途径诱导细胞凋亡。当感染志贺毒素产生菌时,人类可能会出现腹泻、出血性结肠炎(HC)和溶血性尿毒症综合征(HUS),甚至死亡。目前,Stx引起的疾病尚无特效治疗方法。近年来,Stx在癌症治疗和影像学中的应用引起了人们的极大兴趣。本文从Stx的命名、分型、结构、遗传学、发病机制和应用前景等方面对其进行了简要综述。关键词:志贺毒素;痢疾志贺菌;产志贺毒素的大肠杆菌;λ样噬菌体
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引用次数: 0
Molecular detection and sequence analysis of enteroviruses isolated from a suspected outbreak of aseptic meningitis 疑似无菌性脑膜炎暴发肠病毒的分子检测和序列分析
Q4 Immunology and Microbiology Pub Date : 2019-08-31 DOI: 10.3760/CMA.J.ISSN.0254-5101.2019.08.006
Guangming Zhang, Jianyi Mai, Zejun Wang, Sheng-li Meng, Z. Pang, Meng′an Chen, S. Shen
Objective To detect and analyze enteroviruses causing suspected aseptic meningitis in a kindergarten in Jinhua City, Zhejiang Province. Methods Viral RNA was extracted from samples and cDNA was prepared by reverse transcription. PCR was performed to amplify the partial sequences of the 5′-untranslated region (UTR) and VP1 gene of enteroviruses. Serotypes of the viruses were determined by comparing the homology between the partial sequences of VP1 gene. Phylogenetic tree of the partial VP1 sequences was constructed using MEGA6. Results This study included seven patients and twenty-six asymptomatic students. Coxsakievirus A10 (CV-A10) was detected in 48.5% of the students and echovirus 6 (Echo 6) in 21.2%. Besides, 12.1% of the students might be co-infected by the two viruses. Among the seven patients, six were infected by CV-A10 and the other one might have co-infection. According to the phylogenetic analysis, CV-A10 strains detected in this study were closely related to those isolated in China in recent years, including the strains isolated in Xiamen in 2015 and Yunnan in 2017, while the Echo 6 strains were phylogenetically related to those isolated in Yunnan, Guangzhou and Shandong in 2014. Conclusions CV-A10 and Echo 6 were detected in the cases with suspected aseptic meningitis and had close phylogenetic relationships to the strains appeared in China in recent years. Key words: Aseptic meningitis; Enterovirus; Coxsackievirus A10; Echovirus 6
目的检测和分析浙江省金华市某幼儿园疑似无菌性脑膜炎的肠道病毒。方法从样品中提取病毒核糖核酸,逆转录制备cDNA。用聚合酶链式反应扩增肠道病毒5′-非翻译区(UTR)和VP1基因的部分序列。通过比较VP1基因部分序列之间的同源性来确定病毒的血清型。利用MEGA6构建了VP1部分序列的系统发育树。结果本研究包括7名患者和26名无症状学生。柯萨基病毒A10(CV-A10)在48.5%的学生中检出,回声病毒6(Echo 6)在21.2%的学生中检测到,12.1%的学生可能同时感染这两种病毒。在7名患者中,6人感染了CV-A10,另1人可能有合并感染。根据系统发育分析,本研究检测到的CV-A10菌株与近年来在中国分离的菌株密切相关,包括2015年在厦门和2017年在云南分离的菌株,而Echo 6菌株与2014年在云南、广州和山东分离的菌株在系统发育上有关。结论CV-A10和Echo 6在疑似无菌性脑膜炎病例中检出,与近年来我国出现的菌株有密切的系统发育关系。关键词:无菌性脑膜炎;肠道病毒;柯萨奇病毒A10;回声病毒6
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引用次数: 0
Advances in novel vaccine adjuvants based on TLR4 agonists 基于TLR4激动剂的新型疫苗佐剂研究进展
Q4 Immunology and Microbiology Pub Date : 2019-08-31 DOI: 10.3760/CMA.J.ISSN.0254-5101.2019.08.013
Qiao Li, Yuepeng Wang, Yusen Zhou, Z. Kou
Toll-like receptor 4 (TLR4), a type Ⅰ transmembrane protein, has been extensively studied in the Toll-like receptor family at present. TLR4 ligands include lipopolysaccharides (LPS) present in the outer membrane of gram-negative bacteria and monophosphoryl lipid A (MPLA) which is a derivative of LPS. TLR4 agonists, alone, as a major component of compound adjuvants or in combination with other TLRs agonists, have been widely used as adjuvants in various vaccines and demonstrated great potential in vaccine development. This review addressed the discovery, application, features and prospect of novel vaccine adjuvants based on TLR4 agonists, aiming to provide reference for rational use of adjuvants and further development. Key words: Adjuvant; Immunostimulant; TLR4; Vaccine
toll样受体4 (TLR4)是目前toll样受体家族中被广泛研究的Ⅰ型跨膜蛋白。TLR4配体包括存在于革兰氏阴性菌外膜的脂多糖(LPS)和脂多糖衍生物单磷酰脂质A (MPLA)。TLR4激动剂作为复合佐剂的主要成分或与其他tlr激动剂联合使用,已被广泛应用于各种疫苗的佐剂中,在疫苗开发中显示出巨大的潜力。本文综述了基于TLR4激动剂的新型疫苗佐剂的发现、应用、特点及前景,旨在为佐剂的合理使用和进一步开发提供参考。关键词:佐剂;免疫增强药;TLR4;疫苗
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引用次数: 1
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中华微生物学和免疫学杂志
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