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Protein tyrosine nitration 蛋白质酪氨酸硝化
Pub Date : 2024-06-01 DOI: 10.1016/j.rbc.2024.100030
Harry Ischiropoulos

Protein tyrosine nitration is a post-translational modification originating from the biological chemistry of nitric oxide. This article highlights key milestones, discusses apparent controversies and perspectives that have emerged in the last 35 years of research on protein tyrosine nitration. Since the execution of nitric oxide signaling is accomplished entirely by protein post translational modifications (PTMs), the prospect that protein tyrosine nitration augments nitric oxide signaling remains an intriguing but incomplete concept deserving further consideration.

蛋白质酪氨酸硝化是一种源于一氧化氮生物化学的翻译后修饰。本文重点介绍了过去 35 年中蛋白质酪氨酸硝化研究的重要里程碑,讨论了明显的争议和出现的观点。由于一氧化氮信号转导的执行完全由蛋白质翻译后修饰(PTMs)完成,因此蛋白质酪氨酸硝化可增强一氧化氮信号转导的前景仍然是一个有趣但不完整的概念,值得进一步研究。
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引用次数: 0
Role of sulfane sulfur species in elemental tellurium nanorod formation in mammalian cells 哺乳动物细胞中碲元素纳米棒形成过程中的硫磺物种作用
Pub Date : 2024-06-01 DOI: 10.1016/j.rbc.2024.100029
Yu-ki Tanaka , Hiroki Yanagi , Ayako Shiokawa , Akihiro Matsunaga , Mari Shimura , Satoshi Matsuyama , Yasunori Fukumoto , Noriyuki Suzuki , Yasumitsu Ogra

Tellurium (Te) is an industrially useful element but its oxyanions, such as tellurite and tellurate, are naturally occurring chemical forms that can become a potential source of toxicity to humans and animals. As a means of mitigating the toxicity of Te oxyanions, the formation of less toxic zero-valent elemental Te (Te0) nanostructures has been observed in various species including bacteria, fungi, green algae, and higher plants. In this study, we investigated the formation of Te0 nanorods in human hepatoma HepG2 cells. We detected electron-dense Te nanorods in lysosomes after exposure to potassium tellurite. The amount of Te nanorods in the cells gradually increased with the exposure period. Interestingly, the amount of Te in the insoluble fraction of the culture supernatant was approximately 10 times higher than that in HepG2 cells, suggesting that extracellular reducing agents originating from HepG2 cells transformed tetravalent Te (TeO32−) into Te0 in the culture medium. As an extracellular reducing agent, sulfane sulfur species were considered responsible for the reduction of Te(IV). Then, by inhibiting cystathionine γ-lyase with propargylglycine (PPG), we were able to reduce the amount of sulfane sulfur species generated in the cells. In the presence of PPG, the amount of insoluble Te in the culture supernatant, which was possibly composed of Te0 nanorods, was significantly decreased. The results suggest that sulfane sulfur species are involved in the formation of Te0 nanorods from tellurite in mammalian cells and play a critical role in the amelioration of Te oxyanion toxicity.

碲(Te)是一种工业上有用的元素,但它的氧阴离子(如碲化物和碲酸盐)是天然存在的化学形式,可能对人类和动物产生潜在的毒性。为了减轻碲氧阴离子的毒性,在细菌、真菌、绿藻和高等植物等不同物种中观察到了毒性较低的零价元素碲(Te0)纳米结构的形成。在本研究中,我们研究了 Te0 纳米棒在人类肝癌 HepG2 细胞中的形成。暴露于碲化钾后,我们在溶酶体中检测到了电子致密的 Te 纳米棒。细胞中 Te 纳米棒的数量随着暴露时间的延长而逐渐增加。有趣的是,培养上清中不溶部分的 Te 量比 HepG2 细胞中的高出约 10 倍,这表明来自 HepG2 细胞的细胞外还原剂将培养基中的四价 Te(TeO32-)转化成了 Te0。作为一种细胞外还原剂,硫烷硫种被认为是还原 Te(IV)的罪魁祸首。然后,通过使用丙炔甘氨酸(PPG)抑制胱硫醚γ-裂解酶,我们能够减少细胞中产生的烷硫物种的数量。在 PPG 的存在下,培养上清液中的不溶性 Te(可能由 Te0 纳米棒组成)数量显著减少。这些结果表明,烷硫物种参与了哺乳动物细胞中碲形成 Te0 纳米棒的过程,并在改善碲氧阴离子毒性方面发挥了关键作用。
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引用次数: 0
Protein nitration in the artery wall: A contributor to cardiovascular disease? 动脉壁中的蛋白质硝化:心血管疾病的诱因?
Pub Date : 2024-06-01 DOI: 10.1016/j.rbc.2024.100032
Michael J. Davies

Nitration is a well-established post-translational modification of selected free amino acids, as well as proteins, lipids and nucleic acids. Considerable evidence is now available for the formation of long-lived species containing an added –NO2 function on the aromatic rings of tyrosine (Tyr) and tryptophan (Trp) residues (both free and on proteins), to purine nucleobases (and particularly guanine), and to unsaturated lipids within biological systems. Multiple potential mechanisms that give rise to these nitrated species have been identified including reactions of the potent oxidant and nitrating species peroxynitrous acid/peroxynitrite (ONOOH/ONOO) and via oxidative reactions of heme proteins/enzymes (e.g. peroxidases) with the biologically-relevant anion nitrite (NO2). NO2 is likely to be a key intermediate, though involvement of HNO2, NO2+ and NO2Cl has also been proposed. The resulting nitrated products have been widely employed as qualitative or quantitative biomarkers of nitration events in vitro and in vivo. Increasing evidence suggests that at least some of these products are not benign species, with evidence for pro-inflammatory actions. In this article the mechanisms and role of nitration, and particularly that on proteins within the artery wall, in cardiovascular disease is discussed, together with emerging data suggesting that low levels of nitration occur within biological systems in the absence of added oxidants. Both stimulated and endogenous nitration may play a role in modulating cell signaling, alter the structure and function of both cellular- and extracellular proteins, and contribute to various inflammatory pathologies, including atherosclerosis.

硝化作用是对某些游离氨基酸以及蛋白质、脂类和核酸进行的一种行之有效的翻译后修饰。目前已有大量证据表明,在生物系统中,酪氨酸(Tyr)和色氨酸(Trp)残基(游离的和蛋白质上的)、嘌呤核碱基(尤其是鸟嘌呤)和不饱和脂质的芳香环上会形成含有附加 -NO2 功能的长效物质。已确定了产生这些硝化物种的多种潜在机制,包括强氧化剂和硝化物种过氧化亚氮酸/过氧化亚氮酸(ONOOH/ONOO-)的反应,以及血红素蛋白/酶(如过氧化物酶)与生物相关阴离子亚硝酸盐(NO2-)的氧化反应。-NO2 很可能是一个关键的中间产物,但也有人认为 HNO2、NO2+ 和 NO2Cl 也参与了反应。由此产生的硝化产物已被广泛用作体外和体内硝化事件的定性或定量生物标记。越来越多的证据表明,这些产物中至少有一些不是良性的,有证据表明它们具有促炎作用。本文讨论了硝化在心血管疾病中的机制和作用,特别是动脉壁蛋白质上的硝化,以及新出现的数据表明,在没有添加氧化剂的情况下,生物系统中也会发生低水平的硝化。受刺激的硝化和内源性硝化都可能在调节细胞信号、改变细胞内外蛋白质的结构和功能方面发挥作用,并导致各种炎症性病变,包括动脉粥样硬化。
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引用次数: 0
Purine, nucleoside, and DNA nitration by peroxynitrite: Mechanistic considerations 过氧化亚硝酸对嘌呤、核苷和 DNA 的硝化作用:机理研究
Pub Date : 2024-05-15 DOI: 10.1016/j.rbc.2024.100028
Ana G. Sánchez, Deborah J. Keszenman, R. Daniel Peluffo

Nitro-oxidative stress affects DNA, leading to special chemical modifications of nucleobases and deoxyribose, impacting DNA integrity and stability. Because of the importance of the topic, the state of the knowledge on purine, nucleoside, and DNA nitration by the reactive nitrogen species peroxynitrite was reviewed. Following a description of the chemical and physicochemical characteristics of purines and peroxynitrite, purine nitro-oxidation and its products, the reaction mechanisms, and the recently reported kinetic behavior of 8-NitroGua formation are discussed. Moreover, novel computational studies report structural and conformational DNA changes resulting from the formation of guanine nitration products. Given the relevance of the subject, surprisingly few publications deal with this topic, even considering the past five years.

硝基氧化应激会影响 DNA,导致核碱基和脱氧核糖发生特殊的化学修饰,从而影响 DNA 的完整性和稳定性。鉴于该主题的重要性,我们回顾了活性氮物种过氧化亚硝酸盐对嘌呤、核苷和 DNA 硝化作用的认识现状。在描述了嘌呤和过亚硝酸的化学和物理化学特征之后,讨论了嘌呤硝基氧化及其产物、反应机制以及最近报道的 8-NitroGua 形成的动力学行为。此外,新的计算研究报告了鸟嘌呤硝化产物的形成所导致的 DNA 结构和构象变化。鉴于该主题的相关性,即使考虑到过去五年的情况,涉及该主题的出版物也少得令人吃惊。
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引用次数: 0
Nitro-fatty acid signaling: Therapeutic potential in inflammatory diseases 硝基脂肪酸信号传导:炎症性疾病的治疗潜力
Pub Date : 2024-05-14 DOI: 10.1016/j.rbc.2024.100027
Homero Rubbo, Andrés Trostchansky

This review explores the interaction between nitric oxide-derived reactive species and unsaturated fatty acids, leading to the formation of electrophilic nitroalkenes, named nitro-fatty acids (NO2-FA). These species serve as endogenously produced anti-inflammatory signaling mediators, demonstrating protective effects in pre-clinical animal disease models. The discussion herein focuses on the cell signaling actions of NO2-FA, drawing insights from both existing knowledge and recent in vivo data. Additionally, this review addresses the potential pharmacological utility of NO2-FA and ongoing trials, highlighting their promising prospects based on the gathered information.

这篇综述探讨了一氧化氮衍生的活性物种与不饱和脂肪酸之间的相互作用,从而形成亲电的硝基烯烃,即硝基脂肪酸(NO2-FA)。这些物质可作为内源性抗炎信号介质,在临床前动物疾病模型中显示出保护作用。本文将重点讨论 NO2-FA 的细胞信号传导作用,从现有知识和最新体内数据中汲取启示。此外,这篇综述还探讨了 NO2-FA 的潜在药理作用和正在进行的试验,并根据收集到的信息强调了它们的广阔前景。
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引用次数: 0
The chemical biology of dinitrogen trioxide 三氧化二氮的化学生物学
Pub Date : 2024-05-09 DOI: 10.1016/j.rbc.2024.100026
Matías N. Möller , Darío A. Vitturi

Dinitrogen trioxide (N2O3) mediates low-molecular weight and protein S- and N-nitrosation, with recent reports suggesting a role in the formation of nitrating intermediates as well as in nitrite-dependent hypoxic vasodilatation. However, the reactivity of N2O3 in biological systems results in an extremely short half-life that renders this molecule essentially undetectable by currently available technologies. As a result, evidence for in vivo N2O3 formation derives from the detection of nitrosated products as well as from in vitro kinetic determinations, isotopic labeling studies, and spectroscopic analyses. This review will discuss mechanisms of N2O3 formation, reactivity and decomposition, as well as address the role of sub-cellular localization as a key determinant of its actions. Finally, evidence will be discussed supporting different roles for N2O3 as a biologically relevant signaling molecule.

三氧化二氮(N2O3)可介导低分子量、蛋白质 S-和 N-亚硝基化,最近的报告表明,它在硝化中间产物的形成以及亚硝酸盐依赖性缺氧性血管扩张中发挥了作用。然而,由于 N2O3 在生物系统中的反应性,其半衰期极短,目前可用的技术基本上检测不到这种分子。因此,体内 N2O3 形成的证据来自亚硝酸盐化产物的检测以及体外动力学测定、同位素标记研究和光谱分析。本综述将讨论 N2O3 的形成、反应和分解机制,并探讨亚细胞定位作为其作用的关键决定因素的作用。最后,还将讨论支持 N2O3 作为生物相关信号分子发挥不同作用的证据。
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引用次数: 0
Direct fitting improves the accuracy of the horse radish peroxidase competition assay for peroxidase activity 直接拟合提高了萝卜过氧化物酶竞争测定法测定过氧化物酶活性的准确性
Pub Date : 2024-04-26 DOI: 10.1016/j.rbc.2024.100025
Christopher J. Barry , Ché S. Pillay , Johann M. Rohwer

The peroxiredoxins are an important antioxidant protein family and their ability to neutralise oxidants is regularly investigated using horse radish peroxidase in a competition assay system. In this method, the rate constant of a peroxiredoxin is calculated from the fractional inhibition of horse radish peroxidase activity caused by competition with the peroxiredoxin for an oxidant substrate. We developed a model capable of simulating this assay and, using this model, demonstrate that the fractional inhibition calculation significantly and systematically mis-estimates the rate constant under fairly common conditions. We go on to develop a method for fitting simulated assay time-courses to experimental data directly, which significantly outperforms the fractional inhibition method yielding more accurate results. Based on our findings, we recommend using the direct fitting approach to determine peroxidase rate constants from horseradish peroxidase experiments.

过氧化还原酶是一个重要的抗氧化蛋白家族,人们经常使用竞争分析系统中的萝卜过氧化物酶来研究它们中和氧化剂的能力。在这种方法中,过氧化还原酶的速率常数是通过与过氧化还原酶竞争氧化剂底物而导致的萝卜过氧化物酶活性抑制分数计算出来的。我们开发了一个能够模拟这种检测方法的模型,并利用该模型证明,在相当常见的条件下,分数抑制率计算会明显地、系统地误估速率常数。我们进而开发了一种方法,可将模拟测定的时间历程与实验数据直接拟合,其效果明显优于分数抑制法,得出的结果也更准确。根据我们的研究结果,我们建议使用直接拟合法来确定辣根过氧化物酶实验中的过氧化物酶速率常数。
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引用次数: 0
Decoding the enigmatic last gasotransmitter. The intriguing journey of HNO: From hidden origins to clues on reactivity and detection 解密神秘的最后一种气体递质。令人好奇的 HNO 之旅:从隐秘的起源到反应性和检测的线索。
Pub Date : 2024-04-22 DOI: 10.1016/j.rbc.2024.100024
Sebastian A. Suarez

This review focuses on HNO, a molecule of immense chemical and biological importance that has intrigued scientists for decades. Despite its elusive and transient nature, HNO may play an important role in various physiological processes, particularly in cardiovascular regulation. This review thoroughly examines the formation, chemical properties, and biological significance of HNO and highlights ongoing research efforts to unravel its mysteries. Challenges in studying HNO arise from its high reactivity, short half-life, and complex interactions with other nitrogen oxides, particularly nitric oxide. Detection and quantification of HNO in biological systems pose difficulties, prompting the development of advanced techniques. Active research into endogenous HNO formation is revealing intricate pathways within biological systems, the elucidation of which is crucial for exploiting its therapeutic potential. The multifaceted role of HNO in cardiovascular regulation, influencing vasorelaxation, blood pressure reduction, and enhanced cardiac contractility, underscores its profound impact on the circulatory system. Ongoing research holds promise for treating conditions such as hypertension and heart failure. As clinical applications expand, HNO research may unlock treatments for cardiovascular disease, inflammatory disorders, and cancer. The recent discovery of endogenous HNO production in plants adds a new dimension. While numerous clues have emerged, the scientific saga underscores that mysteries persist, evolve, and beckon to perpetual exploration in the realm of science.

HNO 是一种具有重要化学和生物学意义的分子,几十年来一直吸引着科学家的目光。尽管 HNO 具有难以捉摸和瞬时的特性,但它可能在各种生理过程,尤其是心血管调节过程中发挥着重要作用。本综述深入探讨了 HNO 的形成、化学性质和生物学意义,并重点介绍了为揭开其神秘面纱而正在进行的研究工作。研究 HNO 所面临的挑战来自于它的高反应性、短半衰期以及与其他氮氧化物(尤其是一氧化氮)之间复杂的相互作用。检测和定量生物系统中的 HNO 带来了困难,因此需要开发先进的技术。对内源性 HNO 形成的积极研究正在揭示生物系统中错综复杂的途径,而阐明这些途径对于开发其治疗潜力至关重要。HNO 在心血管调节中发挥着多方面的作用,影响着血管舒张、血压降低和心脏收缩力的增强,凸显了它对循环系统的深远影响。正在进行的研究为治疗高血压和心力衰竭等疾病带来了希望。随着临床应用的扩大,HNO 研究可能会开启心血管疾病、炎症性疾病和癌症的治疗方法。最近在植物中发现的内源性 HNO 的产生又增加了一个新的层面。虽然已经出现了许多线索,但这一科学传奇强调了科学领域的奥秘始终存在、不断发展,并召唤着人们不断探索。
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引用次数: 0
Oxidized guanosines induce mitochondrial dysfunction and loss of viability in β-cells 氧化鸟苷诱导β细胞线粒体功能障碍并丧失活力
Pub Date : 2024-04-04 DOI: 10.1016/j.rbc.2024.100022
Inga Sileikaite-Morvaközi , Ksenia Morozova , Nadezda A. Brazhe , Olga Sosnovtseva , Claus Desler , Thomas Mandrup-Poulsen , Michael J. Davies , Clare L. Hawkins

The production of reactive oxygen species and oxidative stress promote β-cell dysfunction and impair insulin secretion, thereby contributing to the pathogenesis of type 2 diabetes mellitus (T2DM). The nucleobase guanine is highly sensitive to oxidation, which results in the formation of 8-oxoguanosine (8oxoG) and 8-oxodeoxyguanosine (8oxodG). The urinary excretion of 8oxoG is associated with the risk of mortality in people with T2DM, including from diabetic complications such as cardiovascular disease. However, the cellular mechanisms responsible for this association are poorly defined. Therefore, in this study, we examined the effect of 8oxoG, 8oxodG and other oxidized guanosine derivatives, on the INS-1E β-cell line. Exposure of INS-1E cells to 8oxoG and 8oxodG decreased metabolic activity and promoted cell death by apoptosis. The change in cell viability was similar to that induced by treatment of INS-1E cells with the inflammatory cytokines interleukin 1β (Il-1β) and tumour necrosis factor α (TNFα). Changes in mitochondrial membrane permeability and superoxide radical formation were also observed with 8oxoG, but there was no significant change in the oxidation state of mitochondrial cytochromes or hydrogen peroxide levels in the INS-1E cells. Interestingly, exposure to 8oxoG and 8-oxodG also increased the mRNA expression of stress response genes, including NADPH dehydrogenase quinone 1 (NQO1), and thioredoxin-interacting protein (TXNIP). Together, these results support a potential role of oxidized guanosine derivatives in the induction of β-cell dysfunction, which could be relevant to the pathogenesis of T2DM.

活性氧的产生和氧化应激会促进β细胞功能障碍,影响胰岛素分泌,从而导致2型糖尿病(T2DM)的发病。核碱基鸟嘌呤对氧化高度敏感,会形成 8-氧代鸟苷(8oxoG)和 8-氧代脱氧鸟苷(8oxodG)。尿液中排出的 8oxoG 与 T2DM 患者的死亡风险有关,包括心血管疾病等糖尿病并发症。然而,造成这种关联的细胞机制尚不明确。因此,在本研究中,我们研究了 8oxoG、8oxodG 和其他氧化鸟苷衍生物对 INS-1E β 细胞系的影响。将 INS-1E 细胞暴露于 8oxoG 和 8oxodG 会降低代谢活性,促进细胞凋亡。细胞活力的变化类似于用白细胞介素 1β (Il-1β)和肿瘤坏死因子 α (TNFα)处理 INS-1E 细胞所引起的变化。8oxoG 还可观察到线粒体膜通透性和超氧自由基形成的变化,但 INS-1E 细胞中线粒体细胞色素的氧化状态或过氧化氢水平没有显著变化。有趣的是,暴露于 8oxoG 和 8-oxodG 还增加了应激反应基因的 mRNA 表达,包括 NADPH 脱氢酶醌 1(NQO1)和硫氧还蛋白相互作用蛋白(TXNIP)。这些结果共同支持了氧化鸟苷衍生物在诱导β细胞功能障碍中的潜在作用,这可能与T2DM的发病机制有关。
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引用次数: 0
Lactoperoxidase catalytically oxidize hydrogen sulfide via intermediate formation of sulfheme derivatives 乳过氧化物酶通过中间形成硫heme 衍生物催化氧化硫化氢
Pub Date : 2024-04-04 DOI: 10.1016/j.rbc.2024.100021
Bessie B. Ríos-González , Andrea Domán , Tamás Ditrói , Dorottya Garai , Leishka D. Crespo , Gary J. Gerfen , Paul G. Furtmüller , Péter Nagy , Juan López-Garriga

The biological chemistry of hydrogen sulfide (H2S) with physiologically important heme proteins is in the focus of redox biology research. In this study, we investigated the interactions of lactoperoxidase (LPO) with H2S in the presence and absence of molecular dioxygen (O2) or hydrogen peroxide (H2O2). Under anaerobic conditions, native LPO forms no heme-H2S complex upon sulfide exposure. However, under aerobic conditions or in the presence of H2O2 the formation of both ferrous and ferric sulfheme (sulfLPO) derivatives was observed based on the appearances of their characteristic optical absorptions at 638 nm and 727 nm, respectively. Interestingly, we demonstrate that LPO can catalytically oxidize H2S by H2O2 via intermediate formation of relatively short-lived ferrous and ferric sulfLPO derivatives. Pilot product analyses suggested that the turnover process generates oxidized sulfide species, which include sulfate (SO42−) and inorganic polysulfides (HSx; x = 2–5). These results indicated that H2S can serve as a non-classical LPO substrate by inducing a reversible sulfheme-like modification of the heme porphyrin ring during turnover. Furthermore, electron paramagnetic resonance data suggest that H2S can act as a scavenger of H2O2 in the presence of LPO without detectable formation of any carbon-centered protein radical species, suggesting that H2S might be capable of protecting the enzyme from radical-mediated damage. We propose possible mechanisms, which explain our results as well as contrasting observations with other heme proteins, where either no sulfheme formation was observed or the generation of sulfheme derivatives provided a dead end for enzyme functions.

硫化氢(H2S)与生理上重要的血红素蛋白的生物化学作用是氧化还原生物学研究的重点。在本研究中,我们研究了乳过氧化物酶(LPO)在分子二氧(O2)或过氧化氢(H2O2)存在和不存在的情况下与 H2S 的相互作用。在厌氧条件下,原生 LPO 暴露于硫化物时不会形成血红素-H2S 复合物。然而,在有氧条件下或有 H2O2 存在时,根据亚铁和铁硫heme(sulfLPO)衍生物分别在 638 纳米和 727 纳米出现的特征性光学吸收,可以观察到它们的形成。有趣的是,我们证明了 LPO 可以催化 H2O2 氧化 H2S,中间形成相对短效的亚铁和铁硫LPO 衍生物。先导产物分析表明,翻转过程会产生氧化的硫化物,其中包括硫酸盐(SO42-)和无机多硫化物(HSx-;x = 2-5)。这些结果表明,H2S 可作为非典型 LPO 底物,在翻转过程中诱导血红素卟啉环发生类似硫heme 的可逆修饰。此外,电子顺磁共振数据表明,在存在 LPO 的情况下,H2S 可作为 H2O2 的清除剂,而不会形成任何可检测到的碳中心蛋白自由基物种,这表明 H2S 可能能够保护酶免受自由基介导的损伤。我们提出了可能的机制,以解释我们的研究结果以及与其他血红素蛋白的对比观察结果,在其他血红素蛋白中,要么没有观察到亚硫酰血红素的形成,要么亚硫酰血红素衍生物的生成为酶的功能提供了一个死胡同。
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引用次数: 0
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Redox Biochemistry and Chemistry
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