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Multi-omics integration reveals the oncogenic role of eccDNAs in diffuse large B-cell lymphoma through STING signalling 多组学整合揭示了eccDNAs通过STING信号在弥漫大B细胞淋巴瘤中的致癌作用。
IF 7.9 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-08-25 DOI: 10.1002/ctm2.1815
Zijuan Wu, Wei Zhang, Luqiao Wang, Jiayan Leng, Yongle Li, Zhou Fan, Mengtao Zhan, Lei Cao, Yongning Jiang, Yan Jiang, Bing Sun, Jianxin Fu, Jianyong Li, Wenyu Shi, Hui Jin
<div> <section> <h3> Background</h3> <p>Extrachromosomal circular DNAs (eccDNAs), a type of double-stranded DNAs (dsDNAs) that facilitate the activation of the DNA sensing machinery, have been implicated in the progression and prognosis of various diseases. While the roles of eccDNAs remain contentious, their significance in diffuse large B-cell lymphoma (DLBCL) has not been reported.</p> </section> <section> <h3> Methods</h3> <p>Circular DNA sequencing (circle-seq) was used to demonstrate the expression profile of eccDNAs in DLBCL, and atomic force microscopy to validate the presence of eccDNAs. CCK-8 and scRNA-seq techniques were employed to uncover the activation of eccDNA in the STING pathway, leading to enhanced cell proliferation. Chemotherapeutic drugs were used to test the hypothesis that DNA damage induces the production of eccDNA, thereby activating the STING pathway independent of cGAS. GEO databases were used for verification of the prognosis of the eccDNA-related genes, and animal models were used to investigate the synergistic effects of DNA damage therapy in combination with STING inhibitors on anti-tumour responses.</p> </section> <section> <h3> Results</h3> <p>EccDNAs were widely expressed in DLBCL and associated with the prognosis of patients. Elevated abundance of eccDNAs promoted the progression of DLBCL. Chemotherapeutic drugs-induced DNA damage triggered the generation of eccDNAs, resulting in the activation of the STING signalling in a cGAS-independent manner. Moreover, inhibition of STING exerted a synergistic anti-tumour effect with cisplatin.</p> </section> <section> <h3> Conclusions</h3> <p>EccDNAs induced by DNA damage exert an oncogenic role in DLBCL via activating the STING signalling independently of cGAS. This finding offers a rational therapeutic strategy combining chemotherapy with targeting STING.</p> </section> <section> <h3> Highlights</h3> <div> <ul> <li>EccDNAs induced by DNA damage exert an oncogenic role in DLBCL via activating the STING signalling independently of cGAS.</li> <li>The combined treatment of chemotherapeutic drugs with STING inhibitor significantly delayed the tumor progression, providing new insights into the therapeutic strategy for patients with DLBCL, particularly the relapsed and/or refractory (R/R) ones.</li> </ul> </div> </section>
背景:染色体外环状DNAs(eccDNAs)是双链DNAs(dsDNAs)的一种,可促进DNA感应机制的激活,已被认为与多种疾病的进展和预后有关。尽管eccDNAs的作用仍有争议,但它们在弥漫大B细胞淋巴瘤(DLBCL)中的重要性尚未见报道:方法:采用环状DNA测序(circle-seq)来证明eccDNAs在DLBCL中的表达谱,并用原子力显微镜来验证eccDNAs的存在。利用CCK-8和scRNA-seq技术揭示了eccDNA在STING通路中的激活作用,从而导致细胞增殖增强。化疗药物被用来验证这样一个假设:DNA损伤会诱导eccDNA的产生,从而激活独立于cGAS的STING通路。利用GEO数据库验证了cccDNA相关基因的预后,并利用动物模型研究了DNA损伤疗法与STING抑制剂联合使用对抗肿瘤反应的协同作用:结果:eccDNA在DLBCL中广泛表达,并与患者的预后相关。eccDNAs丰度的升高促进了DLBCL的进展。化疗药物诱导的DNA损伤会触发eccDNAs的生成,从而以一种与cGAS无关的方式激活STING信号。此外,抑制STING与顺铂具有协同抗肿瘤作用:结论:DNA损伤诱导的EccDNA在DLBCL中通过激活STING信号(独立于cGAS)发挥致癌作用。这一发现为结合化疗和靶向 STING 的合理治疗策略提供了可能:DNA损伤诱导的EccDNA在DLBCL中通过激活STING信号(独立于cGAS)发挥致癌作用。化疗药物与STING抑制剂联合治疗可显著延缓肿瘤进展,为DLBCL患者,尤其是复发和/或难治性(R/R)DLBCL患者的治疗策略提供了新思路。
{"title":"Multi-omics integration reveals the oncogenic role of eccDNAs in diffuse large B-cell lymphoma through STING signalling","authors":"Zijuan Wu,&nbsp;Wei Zhang,&nbsp;Luqiao Wang,&nbsp;Jiayan Leng,&nbsp;Yongle Li,&nbsp;Zhou Fan,&nbsp;Mengtao Zhan,&nbsp;Lei Cao,&nbsp;Yongning Jiang,&nbsp;Yan Jiang,&nbsp;Bing Sun,&nbsp;Jianxin Fu,&nbsp;Jianyong Li,&nbsp;Wenyu Shi,&nbsp;Hui Jin","doi":"10.1002/ctm2.1815","DOIUrl":"10.1002/ctm2.1815","url":null,"abstract":"&lt;div&gt;\u0000 \u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Background&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;Extrachromosomal circular DNAs (eccDNAs), a type of double-stranded DNAs (dsDNAs) that facilitate the activation of the DNA sensing machinery, have been implicated in the progression and prognosis of various diseases. While the roles of eccDNAs remain contentious, their significance in diffuse large B-cell lymphoma (DLBCL) has not been reported.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Methods&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;Circular DNA sequencing (circle-seq) was used to demonstrate the expression profile of eccDNAs in DLBCL, and atomic force microscopy to validate the presence of eccDNAs. CCK-8 and scRNA-seq techniques were employed to uncover the activation of eccDNA in the STING pathway, leading to enhanced cell proliferation. Chemotherapeutic drugs were used to test the hypothesis that DNA damage induces the production of eccDNA, thereby activating the STING pathway independent of cGAS. GEO databases were used for verification of the prognosis of the eccDNA-related genes, and animal models were used to investigate the synergistic effects of DNA damage therapy in combination with STING inhibitors on anti-tumour responses.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Results&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;EccDNAs were widely expressed in DLBCL and associated with the prognosis of patients. Elevated abundance of eccDNAs promoted the progression of DLBCL. Chemotherapeutic drugs-induced DNA damage triggered the generation of eccDNAs, resulting in the activation of the STING signalling in a cGAS-independent manner. Moreover, inhibition of STING exerted a synergistic anti-tumour effect with cisplatin.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Conclusions&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;EccDNAs induced by DNA damage exert an oncogenic role in DLBCL via activating the STING signalling independently of cGAS. This finding offers a rational therapeutic strategy combining chemotherapy with targeting STING.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Highlights&lt;/h3&gt;\u0000 \u0000 &lt;div&gt;\u0000 &lt;ul&gt;\u0000 \u0000 &lt;li&gt;EccDNAs induced by DNA damage exert an oncogenic role in DLBCL via activating the STING signalling independently of cGAS.&lt;/li&gt;\u0000 \u0000 &lt;li&gt;The combined treatment of chemotherapeutic drugs with STING inhibitor significantly delayed the tumor progression, providing new insights into the therapeutic strategy for patients with DLBCL, particularly the relapsed and/or refractory (R/R) ones.&lt;/li&gt;\u0000 &lt;/ul&gt;\u0000 &lt;/div&gt;\u0000 &lt;/section&gt;\u0000 ","PeriodicalId":10189,"journal":{"name":"Clinical and Translational Medicine","volume":"14 8","pages":""},"PeriodicalIF":7.9,"publicationDate":"2024-08-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/ctm2.1815","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142055108","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
TCRvβ8 chimeric antigen receptor natural killer cells exhibit potent preclinical activity against T-cell malignancies TCRvβ8 嵌合抗原受体自然杀伤细胞对 T 细胞恶性肿瘤具有强大的临床前活性。
IF 7.9 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-08-23 DOI: 10.1002/ctm2.70004
Lianjun He, Yinmei He, Ye He, Xing Bao, Yuqiong Yang, Xueyi Qian, Ziyun Lin, Weijie He, Yao Wu, Huimin Shao, Lingjie Zhou, Lin Wan, Zhenyu Xu
<p>Dear Editor</p><p>T-cell malignancies, such as mainly T-cell lymphomas and T-cell acute lymphoblastic leukaemia (T-ALL),<span><sup>1</sup></span> are often associated with poor prognosis.<span><sup>2</sup></span> The effectiveness of immunotherapy for treating T cell leukaemias was not promising.<span><sup>3</sup></span> Recent research on therapeutic targets against T-cell malignancies has primarily focused on CD5 or CD7.<span><sup>4, 5</sup></span> However, targeting these T-cell antigens has led to the occurrence of T-cell disorders due to immune impairment. To address the above problems, we developed a chimeric antigen receptor-natural killer (CAR-NK) platform specifically eliminating malignant TCRvβ8 T-cells while preserving the majority of normal T-cells to avoid immune dysfunction. Both normal and malignant T-cells express a unique TCR β chain,<span><sup>6</sup></span> and clonal expansions of one or more TCRs are often observed in cases of T-cell malignancies,<span><sup>7</sup></span> making the TCR β chain an effective target for CAR therapy. While, there have been multiple reports about CAR-T therapy for targeting TCRvβ,<span><sup>8, 9</sup></span> using NK cells instead of autologous T-cells for CAR-T preparation, not only avoids the risk of contamination by malignant cells in the final product but also prevents fratricide during CAR-T preparation. Additionally, NK cells from healthy individuals have higher vitality and safety.</p><p>We utilized a lentiviral system to construct four TCRvβ8 CAR-NKs (Figure 1A). Among them, 4-1BB-CD3ζ exhibited higher transduction efficiency (Figure 1B and Figure S1A) and greater levels of cytotoxicity (Figure 1E), while showing no significant difference in terms of NK proportion (Figure 1C and Figure S1B) and expansion fold (Figure 1D). Therefore, we selected 4-1BB-CD3ζ CAR for further study.</p><p>The phenotype of CAR-NKs and Mock-NKs is similar (Figure S2A), while an increase in CD107a and interferon-gamma (IFN-γ) expression on CAR-NKs was induced after co-culture with Jurkat cells (Figure S2B). CAR-NKs exhibited promising cytotoxicity against TCRvβ8 positive cells (Figure 1F,G and Figure S3A,B) while having no killing effect on TCRvβ8<sup>−</sup> cells (Figure 1H,J and Figure S3C–E). Furthermore, to assess the activity of CAR-NKs against malignant T cells from a lymphoma patient, peripheral blood was collected and it was observed that CD3(+)/TCRvβ8(+) positive cells accounted for up to 80% by flow cytometry (Figure 1K). CAR-NKs exhibited an enhanced ability to eliminate malignant T cells compared to Mock-NKs (Figure 1L,M). Taken together, Vβ8-CAR-NKs may specifically target Vβ8<sup>+</sup> T leukaemia cells in vitro.</p><p>To monitor CAR-NK expansion and persistence, a repeated antigen stimulation protocol using Jurkat cells was developed (Figure S4A). TCRvβ8 CAR-NKs got an enrichment of CAR<sup>+</sup> cells and a continuous amplification after antigen stimulation (Figure S4B,C). Furthermore, CAR
10 为了研究抗原密度对 CAR-NKs 活性的影响,我们使用慢病毒系统在 CCRF-CEM 细胞上过表达 TCRvβ8,并通过流式细胞术建立了表达不同密度表面 TCRvβ8 的文库(图 3A,B)。与表达高浓度 TCRvβ8 的细胞系相比,CAR-NK 对表达低浓度 TCRvβ8 的细胞系的杀伤能力下降,而且 CAR-NK 的敏感性随着效应细胞比例的增加而增加(图 3C)。总之,这种CAR-NK产品的临床疗效可以根据初始恶性细胞的抗原表达来预测。为了确定CAR-NK在体内是否具有抗肿瘤作用,我们使用NTG小鼠建立了肿瘤携带模型(图4A)。结果发现,与对照组相比,CAR-NKs 组的肿瘤明显减少(图 4B、C)。与对照 NKs 组相比,CAR-NKs 组小鼠的存活期延长了(图 4D)。此外,CAR-NKs在治疗后90天仍可检测到(图4E),而肿瘤细胞几乎检测不到(图4F),这表明CAR-NKs具有持续的抗肿瘤作用。值得注意的是,注射 CAR-NKs 2 周后,CAR-NKs 不会攻击正常组织,也不会产生严重的副作用(图 S7)。随后,我们利用患者衍生的 T 细胞淋巴瘤细胞在 NTG 小鼠体内建立了异种移植模型(图 4G)。CAR-NKs治疗后恶性T细胞明显减少,而对照NKs组肿瘤进展缓慢,PBS组肿瘤负荷进展迅速(图4H)。不出所料,接受 CAR-NKs 治疗的小鼠生存期明显延长(图 4I)。第47天,恶性T细胞持续受到抑制(图4J),骨髓、外周血和脾脏中都检测到了CAR-NK细胞(图4K)。这些发现表明,CAR-NK 在体内具有持久的抗肿瘤细胞活性,不会对正常组织造成有害损伤。这一策略不仅有望根除T细胞恶性肿瘤,而且具有普遍性和高安全性,为T细胞恶性肿瘤治疗提供了一条新的治疗途径。徐振宇、何炼军和万琳设计了研究;何炼军、何烨、何银梅、鲍星、吴瑶和周玲杰完成了大部分实验;林婉、杨玉琼和林紫云负责收集临床研究样本;何练军、钱雪怡和邵慧敏进行数据分析;何练军、何晔、何银梅、鲍星、林婉和徐振宇撰写手稿。本研究得到安徽省高校优秀青年人才支持基金重点项目(gzyqZD2021143)、安徽省现代医药产业发展项目(2021/2022)、安徽省高校自然科学研究重点项目(2022AH051246)、生物大分子研究省级重点实验室开放基金(LAB202201)的资助。所有动物实验均经皖南医学院实验动物伦理委员会批准。
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引用次数: 0
PUS7-dependent pseudouridylation of ALKBH3 mRNA inhibits gastric cancer progression PUS7依赖的ALKBH3 mRNA伪酰化抑制胃癌的进展。
IF 7.9 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-08-23 DOI: 10.1002/ctm2.1811
Yongxia Chang, Hao Jin, Yun Cui, Feng Yang, Kanghua Chen, Wenjun Kuang, Chunxiao Huo, Zhangqi Xu, Ya Li, Aifu Lin, Bo Yang, Wei Liu, Shanshan Xie, Tianhua Zhou
<div> <section> <h3> Background</h3> <p>RNA pseudouridylation is a critical post-transcriptional modification that influences gene expression and impacts various biological functions. Despite its significance, the role of mRNA pseudouridylation in cancer remains poorly understood. This study investigates the impact of pseudouridine synthase 7 (PUS7)-mediated pseudouridylation of Alpha-ketoglutarate-dependent Dioxygenase alkB Homolog 3 (<i>ALKBH3</i>) mRNA in gastric cancer.</p> </section> <section> <h3> Methods</h3> <p>Immunohistochemistry and Western blotting were used to assess PUS7 protein levels in human gastric cancer tissues. The relationship between PUS7 and gastric cancer progression was examined using 3D colony formation assays and subcutaneous xenograft models. Real-time quantitative PCR (RT-qPCR), Western blotting, and polysome profiling assays were conducted to investigate how PUS7 regulates ALKBH3. A locus-specific pseudouridine (Ψ) detection assay was used to identify Ψ sites on <i>ALKBH3</i> mRNA.</p> </section> <section> <h3> Results</h3> <p>Our findings indicate a significant reduction of PUS7 in gastric cancer tissues compared to adjacent non-tumour tissues. Functional analyses reveal that PUS7 inhibits gastric cancer cell proliferation and tumour growth via its catalytic activity. Additionally, PUS7 enhances the translation efficiency of <i>ALKBH3</i> mRNA by modifying the U696 site with pseudouridine, thereby attenuating tumour growth. Importantly, ALKBH3 functions as a tumour suppressor in gastric cancer, with its expression closely correlated with PUS7 levels in tumour tissues.</p> </section> <section> <h3> Conclusions</h3> <p>PUS7-dependent pseudouridylation of <i>ALKBH3</i> mRNA enhances its translation, thereby suppressing gastric cancer progression. These findings highlight the potential significance of mRNA pseudouridylation in cancer biology and suggest a therapeutic target for gastric cancer.</p> </section> <section> <h3> Highlights</h3> <div> <ul> <li>PUS7 enhances the translation efficiency of ALKBH3 through its pseudouridylation activity on ALKBH3 mRNA, thereby inhibiting gastric tumourigenesis.</li> <li>The expression levels of PUS7 and ALKBH3 are significantly correlated in gastric tumours, which may be potential prognostic predictors and therapeutic targets for patients with gastric cancer.</li>
背景:RNA 伪核苷酸化是一种关键的转录后修饰,会影响基因表达并影响各种生物功能。尽管其意义重大,但人们对 mRNA 伪尿嘧啶化在癌症中的作用仍然知之甚少。本研究探讨了假尿苷合成酶7(PUS7)介导的α-酮戊二酸依赖性二氧合酶alkB同源物3(ALKBH3)mRNA假尿苷化对胃癌的影响:方法:采用免疫组织化学和 Western 印迹技术评估人胃癌组织中 PUS7 蛋白水平。采用三维集落形成试验和皮下异种移植模型检测了 PUS7 与胃癌进展之间的关系。研究人员还进行了实时定量 PCR(RT-qPCR)、Western 印迹和多聚体图谱分析,以探讨 PUS7 如何调控 ALKBH3。利用位点特异性假尿嘧啶(Ψ)检测试验确定了 ALKBH3 mRNA 上的Ψ位点:结果:我们的研究结果表明,与邻近的非肿瘤组织相比,胃癌组织中的 PUS7 明显减少。功能分析显示,PUS7 通过其催化活性抑制胃癌细胞增殖和肿瘤生长。此外,PUS7 通过用假尿苷修饰 U696 位点来提高 ALKBH3 mRNA 的翻译效率,从而抑制肿瘤生长。重要的是,ALKBH3在胃癌中发挥着肿瘤抑制因子的作用,其表达量与肿瘤组织中的PUS7水平密切相关:结论:PUS7 依赖的 ALKBH3 mRNA 伪尿苷化可增强其翻译,从而抑制胃癌的进展。这些发现凸显了 mRNA 伪酰化在癌症生物学中的潜在意义,并提出了胃癌的治疗靶点:PUS7通过对ALKBH3 mRNA的假苷酸化活性提高了ALKBH3的翻译效率,从而抑制了胃癌的发生。PUS7和ALKBH3在胃癌中的表达水平显著相关,可能是胃癌患者潜在的预后预测指标和治疗靶点。
{"title":"PUS7-dependent pseudouridylation of ALKBH3 mRNA inhibits gastric cancer progression","authors":"Yongxia Chang,&nbsp;Hao Jin,&nbsp;Yun Cui,&nbsp;Feng Yang,&nbsp;Kanghua Chen,&nbsp;Wenjun Kuang,&nbsp;Chunxiao Huo,&nbsp;Zhangqi Xu,&nbsp;Ya Li,&nbsp;Aifu Lin,&nbsp;Bo Yang,&nbsp;Wei Liu,&nbsp;Shanshan Xie,&nbsp;Tianhua Zhou","doi":"10.1002/ctm2.1811","DOIUrl":"10.1002/ctm2.1811","url":null,"abstract":"&lt;div&gt;\u0000 \u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Background&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;RNA pseudouridylation is a critical post-transcriptional modification that influences gene expression and impacts various biological functions. Despite its significance, the role of mRNA pseudouridylation in cancer remains poorly understood. This study investigates the impact of pseudouridine synthase 7 (PUS7)-mediated pseudouridylation of Alpha-ketoglutarate-dependent Dioxygenase alkB Homolog 3 (&lt;i&gt;ALKBH3&lt;/i&gt;) mRNA in gastric cancer.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Methods&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;Immunohistochemistry and Western blotting were used to assess PUS7 protein levels in human gastric cancer tissues. The relationship between PUS7 and gastric cancer progression was examined using 3D colony formation assays and subcutaneous xenograft models. Real-time quantitative PCR (RT-qPCR), Western blotting, and polysome profiling assays were conducted to investigate how PUS7 regulates ALKBH3. A locus-specific pseudouridine (Ψ) detection assay was used to identify Ψ sites on &lt;i&gt;ALKBH3&lt;/i&gt; mRNA.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Results&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;Our findings indicate a significant reduction of PUS7 in gastric cancer tissues compared to adjacent non-tumour tissues. Functional analyses reveal that PUS7 inhibits gastric cancer cell proliferation and tumour growth via its catalytic activity. Additionally, PUS7 enhances the translation efficiency of &lt;i&gt;ALKBH3&lt;/i&gt; mRNA by modifying the U696 site with pseudouridine, thereby attenuating tumour growth. Importantly, ALKBH3 functions as a tumour suppressor in gastric cancer, with its expression closely correlated with PUS7 levels in tumour tissues.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Conclusions&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;PUS7-dependent pseudouridylation of &lt;i&gt;ALKBH3&lt;/i&gt; mRNA enhances its translation, thereby suppressing gastric cancer progression. These findings highlight the potential significance of mRNA pseudouridylation in cancer biology and suggest a therapeutic target for gastric cancer.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Highlights&lt;/h3&gt;\u0000 \u0000 &lt;div&gt;\u0000 &lt;ul&gt;\u0000 \u0000 &lt;li&gt;PUS7 enhances the translation efficiency of ALKBH3 through its pseudouridylation activity on ALKBH3 mRNA, thereby inhibiting gastric tumourigenesis.&lt;/li&gt;\u0000 \u0000 &lt;li&gt;The expression levels of PUS7 and ALKBH3 are significantly correlated in gastric tumours, which may be potential prognostic predictors and therapeutic targets for patients with gastric cancer.&lt;/li&gt;\u0000 ","PeriodicalId":10189,"journal":{"name":"Clinical and Translational Medicine","volume":"14 8","pages":""},"PeriodicalIF":7.9,"publicationDate":"2024-08-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/ctm2.1811","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142035424","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Single-nucleus and spatial transcriptome reveal adrenal homeostasis in normal and tumoural adrenal glands 单核和空间转录组揭示了正常和肿瘤肾上腺的平衡状态
IF 7.9 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-08-21 DOI: 10.1002/ctm2.1798
Barbara Altieri, A. Kerim Secener, Somesh Sai, Cornelius Fischer, Silviu Sbiera, Panagiota Arampatzi, Stefan Kircher, Sabine Herterich, Laura-Sophie Landwehr, Sarah N. Vitcetz, Caroline Braeuning, Martin Fassnacht, Cristina L. Ronchi, Sascha Sauer

The human adrenal gland is a complex endocrine tissue. Studies on adrenal renewal have been limited to animal models or human foetuses. Enhancing our understanding of adult human adrenal homeostasis is crucial for gaining insights into the pathogenesis of adrenal diseases, such as adrenocortical tumours.

Here, we present a comprehensive cellular genomics analysis of the adult human normal adrenal gland, combining single-nuclei RNA sequencing and spatial transcriptome data to reconstruct adrenal gland homeostasis. As expected, we identified primary cells of the various zones of the adrenal cortex and medulla, but we also uncovered additional cell types. They constitute the adrenal microenvironment, including immune cells, mostly composed of a large population of M2 macrophages, and new cell populations, including different subpopulations of vascular-endothelial cells and cortical-neuroendocrine cells. Utilizing spatial transcriptome and pseudotime trajectory analysis, we support evidence of the centripetal dynamics of adrenocortical cell maintenance and the essential role played by Wnt/β-catenin, sonic hedgehog, and fibroblast growth factor pathways in the adult adrenocortical homeostasis. Furthermore, we compared single-nuclei transcriptional profiles obtained from six healthy adrenal glands and twelve adrenocortical adenomas. This analysis unveiled a notable heterogeneity in cell populations within the adenoma samples. In addition, we identified six distinct adenoma-specific clusters, each with varying distributions based on steroid profiles and tumour mutational status.

Overall, our results provide novel insights into adrenal homeostasis and molecular mechanisms potentially underlying early adrenocortical tumorigenesis and/or autonomous steroid secretion. Our cell atlas represents a powerful resource to investigate other adrenal-related pathologies.

人体肾上腺是一种复杂的内分泌组织。有关肾上腺更新的研究仅限于动物模型或人类胎儿。要深入了解肾上腺疾病(如肾上腺皮质肿瘤)的发病机理,加强对成年人类肾上腺稳态的了解至关重要。在这里,我们结合单核 RNA 测序和空间转录组数据,对成人正常肾上腺进行了全面的细胞基因组学分析,以重建肾上腺的稳态。不出所料,我们发现了肾上腺皮质和髓质各区的原始细胞,但我们还发现了其他细胞类型。它们构成了肾上腺微环境,包括免疫细胞(主要由大量 M2 巨噬细胞组成)和新细胞群,包括血管内皮细胞和皮质神经内分泌细胞的不同亚群。利用空间转录组和伪时间轨迹分析,我们证实了肾上腺皮质细胞维持的向心动力,以及 Wnt/β-catenin、声刺猬和成纤维细胞生长因子通路在成人肾上腺皮质稳态中的重要作用。此外,我们还比较了从六个健康肾上腺和十二个肾上腺皮质腺瘤中获得的单核转录谱。这项分析揭示了腺瘤样本中细胞群的显著异质性。此外,我们还发现了六个不同的腺瘤特异性群组,每个群组根据类固醇谱和肿瘤突变状态的不同而分布各异。总之,我们的研究结果为肾上腺稳态和早期肾上腺皮质肿瘤发生和/或自主类固醇分泌的潜在分子机制提供了新的见解。我们的细胞图谱是研究其他肾上腺相关病症的强大资源。
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引用次数: 0
Restoring expression of tumour suppressor PTEN by engineered circular RNA-enhanced Osimertinib sensitivity in non-small cell lung cancer 通过工程化环形 RNA 恢复肿瘤抑制因子 PTEN 的表达,增强非小细胞肺癌患者对奥希替尼的敏感性
IF 7.9 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-08-21 DOI: 10.1002/ctm2.1792
Haoran Li, Zheng Liu, Shaoyi Chen, Jingsheng Cai, Peiyu Wang, Kezhong Chen, Mantang Qiu
<p>Dear Editor,</p><p>This study provides a new strategy to construct circular RNA (circRNA) in vitro named NeoAna, with splicing sites concealed in CVB3_IRES. Re-storing phosphatase and tensin homologue deleted on chromosome 10 (PTEN) expression by engineered circRNA enhances sensitivity to Osimertinib in non-small lung cancer (NSCLC).</p><p>Previous Anabaena permuted intron-exon system could permit the circularisation of sequences up to 5 kb in length, significantly longer than previously reported; however, it is important to acknowledge the presence of ‘scar sequences’ in the final products (Figure 1A).<span><sup>1-3</sup></span> We designed the NeoAna systems to synthesise circRNAs (Figure 1B) without scar sequences (Figure S1). As shown in Figure 1C, the circRNA (enhanced green fluorescent protein [EGFP], as an example) is clearly observed and resistance to RNase R treatment. Indeed, the formation of circRNA was further confirmed by PCR and the exact splicing site was determined by Sanger sequencing (Figure 1D,E). Successful protein translation was confirmed in cells (Figure 1F,H). Then, in vitro transcription (IVT) products of NeoAna system were subjected to high-performance liquid chromatography and each fraction was transfected into 293T cells, and the main peak showed strongest protein expression (Figure 1G,I‒K). Then, we synthesised pseudo-uridine-modified linear EGFP (m1ψ-EGFP), cEGFP_Ana and cEGFP_NeoAna (Figure S2A) and transfected three RNAs into 293T and H1299 cells and green fluorescence and protein expression were observed in cells (Figure S2B,C). Compared with cEGFP_Ana, cEGFP_NeoAna induced weaker innate immunity response in 293T cells (Figure 1L). Besides, we found that the stability of cEGFP_NeoAna is comparable to that of cEGFP_Ana (Figure S3A).</p><p>The well-known tumour suppressor, PTEN is a negative regulator of epidermal growth factor receptor (EGFR) signalling pathway,<span><sup>4</sup></span> and PTEN protein expression is often lost in lung cancer.<span><sup>5</sup></span> Thus, restoring PTEN expression might reverse EGFR-TKI resistance.<span><sup>6</sup></span> We synthesised PTEN protein template with NeoAna system (Figure S3B‒E) and long-lasting PTEN protein expression was observed. Osimertinib-resistant cells were established in HCC827 and PC9 cells, since they harbour EGFR exon 19 deletion (Figure S4A‒E).</p><p>Cell Counting Kit-8 (CCK-8), colony formation and 5-ethynyl-2'-deoxyuridine (EdU) assays showed that cPTEN_NeoAna increased sensitivity to Osimertinib compared with control group (Figures 2A‒D, S4A and S3D). Annexin V-FITC and TUNEL assay both confirmed that apoptosis rate was increased by elevating the concentration of Osimertinib and the transfection of cPTEN_NeoAna (Figures 2E,F and S5) in PC9 Osimertinib-resistance (PC9OR) and HCC827 Osimertinib-resistance (HCC827OR) cells.</p><p>The cEGFP_NeoAna was encapsulated by lipid nanoparticles (LNP) to form the stable complex and observed under electron micr
亲爱的编辑,这项研究提供了一种在体外构建环状RNA(circRNA)的新策略,名为NeoAna,其剪接位点隐藏在CVB3_IRES中。通过工程化环状RNA重新恢复10号染色体上缺失的磷酸酶和天丝同源物(PTEN)的表达,可提高非小肺癌(NSCLC)患者对奥希替尼的敏感性。先前的 Anabaena permuted intron-exon 系统可实现长度达 5 kb 的序列环化,大大长于之前的报道;然而,必须承认最终产物中存在 "疤痕序列"(图 1A)1-3。我们设计的 NeoAna 系统可合成无疤痕序列的 circRNA(图 1B)(图 S1)。如图 1C 所示,circRNA(以增强型绿色荧光蛋白 [EGFP] 为例)可清晰观察到,并可抵抗 RNase R 处理。事实上,circRNA 的形成通过 PCR 得到了进一步证实,其确切的剪接位点也通过 Sanger 测序得到了确定(图 1D,E)。细胞中成功的蛋白质翻译也得到了证实(图 1F、H)。然后,将 NeoAna 系统的体外转录(IVT)产物进行高效液相色谱分析,并将各馏分转染到 293T 细胞中,结果显示主峰的蛋白表达最强(图 1G,I-K)。然后,我们合成了假尿苷修饰的线性 EGFP(m1ψ-EGFP)、cEGFP_Ana 和 cEGFP_NeoAna(图 S2A),并将三种 RNA 转染到 293T 和 H1299 细胞中,在细胞中观察到绿色荧光和蛋白表达(图 S2B、C)。与 cEGFP_Ana 相比,cEGFP_NeoAna 在 293T 细胞中诱导的先天免疫反应较弱(图 1L)。此外,我们发现 cEGFP_NeoAna 的稳定性与 cEGFP_Ana 相当(图 S3A)。众所周知,肿瘤抑制因子 PTEN 是表皮生长因子受体(EGFR)信号通路的负调控因子,4 并且 PTEN 蛋白表达在肺癌中经常丢失。细胞计数试剂盒-8(CCK-8)、菌落形成和 5-乙炔基-2'-脱氧尿苷(EdU)检测表明,与对照组相比,cPTEN_NeoAna 增加了奥希替尼的敏感性(图 2A-D、S4A 和 S3D)。Annexin V-FITC和TUNEL检测均证实,在PC9 Osimertinib耐药(PC9OR)和HCC827 Osimertinib耐药(HCC827OR)细胞中,提高Osimertinib浓度和转染cPTEN_NeoAna可增加细胞凋亡率(图2E、F和S5)。cEGFP_NeoAna 被脂质纳米颗粒(LNP)包裹形成稳定的复合物,并在电子显微镜下观察(图 S6A)。经测量,LNP_ cEGFP_NeoAna 的平均直径为 90.6 nm。cEGFP_NeoAna 和 cPTEN_NeoAna 的 LNP 封装率分别为 91.8% 和 90.6%。然后,我们将 LNP_cEGFP_NeoAna 转染到 A549 和 H1299 细胞中,观察到绿色荧光(图 S6C,D)。用 PC9OR 细胞建立异种移植小鼠模型,并通过瘤内注射 cPTEN_NeoAna(图 2G)。cPTEN_NeoAna 组小鼠的肿瘤体积、Ki-67 表达和 p-AKT 表达最低(图 2H-K)。此外,我们还发现 LNP 和 cPTEN_NeoAna 均无毒性(图 2L 和 S4E)。我们合成了m1ψ-PTEN、cPTEN_Ana和cPTEN_NeoAna(图S2G),并用这些RNA与Osimertinib联合处理细胞。然后,CCK-8 和集落形成试验表明,cPTEN_NeoAna 比 cPTEN_Ana 和 m1ψ-PTEN 更有效(图 3A-D),但没有显著的统计学差异。cPTEN_NeoAna 组的细胞凋亡率最高,且随着奥希替尼浓度的增加而增加(图 3E、F)。综上所述,与其他组相比,cPTEN_NeoAna 加 Osimertinib 组细胞的增殖能力最低,凋亡率最高。然后,我们建立了小鼠异种移植肿瘤模型,以评估 m1ψ-PTEN、cPTEN_Ana 和 cPTEN_NeoAna 在体内的疗效(图 3G)。我们观察到,cPTEN_NeoAna 的肿瘤体积在四组中最小,这与体外实验结果一致(图 3H-J)。免疫组化结果表明,PTEN 在三组中都得到了成功恢复(图 3K)。cPTEN_NeoAna 中 p-AKT 和 Ki-67 的表达量最低。与 PC9 和 HCC827 细胞相比,PTEN 蛋白在 PC9OR 和 HCC827OR 细胞中略有下降。
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引用次数: 0
Extracellular vesicles as the next-generation modulators of pharmacokinetics and pharmacodynamics of medications and their potential as adjuvant therapeutics 细胞外囊泡作为新一代药物药代动力学和药效学调节剂及其作为辅助疗法的潜力
IF 7.9 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-08-21 DOI: 10.1002/ctm2.70002
Jiaqi Liu, Joel Z. Nordin, Andrew J. McLachlan, Wojciech Chrzanowski

Background and main body

Pharmacokinetics (PK) and pharmacodynamics (PD) are central concepts to guide the dosage and administration of drug therapies and are essential to consider for both healthcare professionals and researchers in therapeutic planning and drug discovery. PK/PD properties of a drug significantly influence variability in response to treatment, including therapeutic failure or excessive medication-related harm. Furthermore, suboptimal PK properties constitute a significant barrier to further development for some candidate treatments in drug discovery. This article describes how extracellular vesicles (EVs) affect different aspects of PK and PD of medications and their potential to modulate PK and PD properties to address problematic PK/PD profiles of drugs. We reviewed EVs' intrinsic effects on cell behaviours and medication responses. We also described how surface and cargo modifications can enhance EV functionalities and enable them as adjuvants to optimise the PK/PD profile of conventional medications. Furthermore, we demonstrated that various bioengineering strategies can be used to modify the properties of EVs, hence enhancing their potential to modulate PK and PD profile of medications.

Conclusion

This review uncovers the critical role of EVs in PK and PD modulation and motivates further research and the development of assays to unfold EVs’ full potential in solving PK and PD-related problems. However, while we have shown that EVs play a vital role in modulating PK and PD properties of medications, we postulated that it is essential to define the context of use when designing and utilising EVs in pharmaceutical and medical applications.

Highlights

  • Existing solutions for pharmacokinetics and pharmacodynamics modulation are limited.
  • Extracellular vesicles can optimise pharmacokinetics as a drug delivery vehicle.
  • Biogenesis and administration of extracellular vesicles can signal cell response.
  • The pharmaceutical potential of extracellular vesicles can be enhanced by surface and cargo bioengineering.
  • When using extracellular vesicles as modulators of pharmacokinetics and pharmacodynamics, the ‘context of use’ must be considered.
背景和正文 药代动力学(PK)和药效学(PD)是指导药物治疗剂量和给药的核心概念,也是医护人员和研究人员在制定治疗计划和进行药物研发时必须考虑的因素。药物的 PK/PD 特性极大地影响着治疗反应的变化,包括治疗失败或与药物相关的过度伤害。此外,在药物发现过程中,不理想的 PK 特性会严重阻碍某些候选疗法的进一步开发。本文介绍了细胞外囊泡(EVs)如何影响药物PK和PD的不同方面,以及它们调节PK和PD特性以解决药物PK/PD谱问题的潜力。我们回顾了EVs对细胞行为和药物反应的内在影响。我们还介绍了表面和货物修饰如何增强 EV 的功能,并使其成为优化传统药物 PK/PD 特征的佐剂。此外,我们还展示了各种生物工程策略可用于改变 EVs 的特性,从而增强其调节药物 PK 和 PD 谱的潜力。 结论 本综述揭示了 EVs 在 PK 和 PD 调节中的关键作用,并激励人们进一步研究和开发检测方法,以充分发挥 EVs 在解决 PK 和 PD 相关问题方面的潜力。不过,虽然我们已经证明了 EVs 在调节药物 PK 和 PD 特性方面发挥着重要作用,但我们认为,在设计和利用 EVs 进行制药和医疗应用时,必须明确使用环境。 亮点 用于药代动力学和药效学调节的现有解决方案非常有限。 细胞外囊泡作为一种给药载体可以优化药代动力学。 细胞外囊泡的生物生成和给药可发出细胞反应信号。 细胞外囊泡的制药潜力可通过表面和货物生物工程得到增强。 将细胞外囊泡用作药代动力学和药效学调节剂时,必须考虑 "使用环境"。
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引用次数: 0
The healing power of sensory neurons: New horizons for diabetic and neuropathic tissue repair 感觉神经元的愈合能力:糖尿病和神经病理性组织修复的新视野
IF 7.9 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-08-21 DOI: 10.1002/ctm2.1813
Yen-Zhen Lu, Sanjay Ramakrishnan, Mikaël M. Martino
<p>Tissue repair and regeneration after injury is a highly complex process involving the coordination of multiple biological systems. Therefore, successful regenerative medicine strategies should harness the key mechanisms that control the tissue healing process, particularly when these mechanisms are disrupted by pathological conditions that impede normal healing. Nociceptive sensory neurons, or nociceptors, are specialized primary sensory neurons with nerve endings in tissues such as skin, muscles, and joints that detect and respond to noxious stimuli, including inflammatory mediators.<span><sup>1</sup></span> Although nociceptors have been shown to have pro-inflammatory activities in some contexts, they generally mediate anti-inflammatory processes<span><sup>1, 2</sup></span> and their activation has been shown to be involved in skin wound healing.<span><sup>3, 4</sup></span></p><p>Lu et al. investigated the role of peptidergic nociceptive sensory neurons in tissue repair and regeneration following acute injury in mice, exploring whether neuro-immune interactions could be harnessed to promote tissue healing.<span><sup>1</sup></span> They found that nociceptors extend their nerve endings into injured skin and muscle after acute injury and release calcitonin gene-related peptide (CGRP). CGRP from sensory neurons modulates neutrophils and monocytes/macrophages—the majority of immune cells accumulating in injured tissues—to create an anti-inflammatory and pro-healing environment. Mechanistically, the immunomodulatory and pro-healing effects of CGRP were mediated by the release of the extracellular matrix protein thrombospondin-1 (TSP-1) from neutrophils and macrophages, although CGRP may also exert direct effects. TSP-1 was shown to act in an autocrine/paracrine manner, promoting neutrophil efferocytosis by macrophages (clearance by engulfment) and polarizing macrophages to a pro-repair phenotype. Both processes are crucial to proper and timely tissue healing. In addition, TSP-1 was found to accelerate the death of neutrophil and pro-inflammatory macrophage , which could further contribute to reducing inflammation (Figure 1A). Despite these findings, a few questions still remain. For example, the precise mechanisms by which nociceptors are activated after acute injury and how nerve endings grow into injured tissue are not fully understood. Additionally, there may be critical feedback interactions between immune cells and nociceptors both at the injury site and in the dorsal root ganglia, where the cell bodies of sensory neurons are located. Furthermore, the neuro-immune-regenerative axis may also be significant in other tissues or contexts that involve similar mechanisms to tissue healing, such as cancer<span><sup>2</sup></span> and fibrotic tissue formation, both of which rely heavily on immunoregulation.</p><p>The discovery of a neuro-immune-regenerative axis mediated by CGRP is particularly relevant for patients with diabetes, as more than half
这表明,由具有更好稳定性和药代动力学的 CGRP 或 CGRP 类似物组成的疗法可以有效促进糖尿病患者以及免疫反应失调和周围神经系统受损的各种情况下的组织愈合。这类情况包括老年人群、烧伤患者和眼部神经病患者。7 CGRP 在组织愈合中的关键作用提出了一个关于在临床中使用 CGRP 抑制剂的重要问题。事实上,针对 CGRP 的单克隆抗体(如 erenumab、galcanezumab、fremanezumab 和 eptinezumab)以及作为 CGRP 受体拮抗剂的 gepants8 已被批准用于偏头痛的治疗和预防。虽然 CGRP 抑制剂尚未与重大不良事件相关联,但有病例研究报告称,使用 CGRP 单克隆抗体治疗偏头痛患者与全身炎症病理恶化和部分患者伤口愈合严重受损有关。尽管仍有一些重要问题需要进一步研究解决,但 Lu 等人已经揭示了一个关键的神经-免疫-再生轴,它可能对再生医学产生变革性影响。这一发现可用于为糖尿病和神经病患者设计新型再生疗法,从而改善各种疾病的治疗效果,提高整体生活质量。莫纳什大学已就本文所述的分子设计申请专利保护,Yen-Zhen Lu和Mikaël M. Martino被列为发明人。Sanjay Ramakrishna声明没有利益冲突。
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引用次数: 0
Potential mechanisms of cancer stem-like progenitor T-cell bio-behaviours 癌症干样祖细胞 T 细胞生物行为的潜在机制。
IF 7.9 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-08-21 DOI: 10.1002/ctm2.1817
Ling Ni

In situations involving continuous exposure to antigens, such as chronic infections or cancer, antigen-specific CD8+ T cells can become dysfunctional or exhausted. This change is marked by increased expression levels of inhibitory receptors (PD-1 and Tim-3). Stem-like progenitor exhausted (Tpex) cells, a subset of exhausted cells that express TCF-1 and are mainly found in the lymph nodes, demonstrate the ability to self-renew and exhibit a high rate of proliferation. Tpex cells can further differentiate into transitional intermediate exhausted (Tex-int) cells and terminally exhausted (Tex-term) cells. Alternatively, they can directly differentiate into Tex-term cells. Tpex cells are the predominant subset that respond to immune checkpoint inhibitors (ICI), making them a prime candidate for improving the efficacy of ICI therapy. This review article aimed to present the latest developments in the field of Tpex formation, expansion, and differentiation in the context of cancer, as well as their responses to ICIs in cancer immunotherapy. Consequently, it may be possible to develop novel treatments that exclusively target Tpex cells, thus improving overall treatment outcomes.

Key points

  • Tpex cells are located in lymph nodes and TLS.

  • Several pathways control the differentiation trajectories of Tpex cells, including epigenetic factors, transcription factors, cytokines, age, sex, etc.

在持续暴露于抗原(如慢性感染或癌症)的情况下,抗原特异性 CD8+ T 细胞会出现功能障碍或衰竭。这种变化的特征是抑制性受体(PD-1 和 Tim-3)的表达水平升高。干样祖细胞衰竭(Tpex)细胞是衰竭细胞的一个亚群,表达 TCF-1,主要存在于淋巴结中。Tpex细胞可进一步分化为过渡中间衰竭(Tex-int)细胞和终末衰竭(Tex-term)细胞。或者,它们也可以直接分化成 Tex-term 细胞。Tpex细胞是对免疫检查点抑制剂(ICI)有反应的主要亚群,是提高ICI疗效的主要候选细胞。这篇综述文章旨在介绍癌症背景下 Tpex 形成、扩增和分化领域的最新进展,以及它们在癌症免疫疗法中对 ICIs 的反应。因此,有可能开发出专门针对 Tpex 细胞的新型疗法,从而改善整体治疗效果。要点Tpex细胞位于淋巴结和TLS中。Tpex细胞的分化轨迹受多种途径控制,包括表观遗传因子、转录因子、细胞因子、年龄、性别等。
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引用次数: 0
Cyclic-di-GMP induces inflammation and acute lung injury through direct binding to MD2 环二-GMP 通过与 MD2 直接结合诱导炎症和急性肺损伤
IF 7.9 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-08-21 DOI: 10.1002/ctm2.1744
Chenchen Qian, Weiwei Zhu, Jiong Wang, Zhe Wang, Weiyang Tang, Xin Liu, Bo Jin, Yong Xu, Yuyang Zhang, Guang Liang, Yi Wang

Background

Severe bacterial infections can trigger acute lung injury (ALI) and acute respiratory distress syndrome, with bacterial pathogen-associated molecular patterns (PAMPs) exacerbating the inflammatory response, particularly in COVID-19 patients. Cyclic-di-GMP (CDG), one of the PAMPs, is synthesized by various Gram-positve and Gram-negative bacteria. Previous studies mainly focused on the inflammatory responses triggered by intracellular bacteria-released CDG. However, how extracellular CDG, which is released by bacterial autolysis or rupture, activates the inflammatory response remains unclear.

Methods

The interaction between extracellular CDG and myeloid differentiation protein 2 (MD2) was investigated using in vivo and in vitro models. MD2 blockade was achieved using specific inhibitor and genetic knockout mice. Site-directed mutagenesis, co-immunoprecipitation, SPR and Bis-ANS displacement assays were used to identify the potential binding sites of MD2 on CDG.

Results

Our data show that extracellular CDG directly interacts with MD2, leading to activation of the TLR4 signalling pathway and lung injury. Specific inhibitors or genetic knockout of MD2 in mice significantly alleviated CDG-induced lung injury. Moreover, isoleucine residues at positions 80 and 94, along with phenylalanine at position 121, are essential for the binding of MD2 to CDG.

Conclusion

These results reveal that extracellular CDG induces lung injury through direct interaction with MD2 and activation of the TLR4 signalling pathway, providing valuable insights into bacteria-induced ALI mechanisms and new therapeutic approaches for the treatment of bacterial co-infection in COVID-19 patients.

背景严重的细菌感染会引发急性肺损伤(ALI)和急性呼吸窘迫综合征,细菌病原体相关分子模式(PAMPs)会加剧炎症反应,尤其是在 COVID-19 患者中。环状二-GMP(CDG)是 PAMPs 之一,由各种革兰氏阳性和革兰氏阴性细菌合成。以往的研究主要集中于细胞内细菌释放的 CDG 所引发的炎症反应。然而,细菌自溶或破裂释放的细胞外 CDG 如何激活炎症反应仍不清楚。 方法 采用体内和体外模型研究了细胞外 CDG 与髓样体分化蛋白 2(MD2)之间的相互作用。使用特异性抑制剂和基因敲除小鼠实现了对 MD2 的阻断。利用定点突变、共免疫沉淀、SPR 和 Bis-ANS 位移试验来确定 MD2 在 CDG 上的潜在结合位点。 结果 我们的数据显示,细胞外 CDG 直接与 MD2 相互作用,导致 TLR4 信号通路的激活和肺损伤。特异性抑制剂或基因敲除 MD2 能明显减轻 CDG 引起的肺损伤。此外,第 80 和 94 位的异亮氨酸残基以及第 121 位的苯丙氨酸是 MD2 与 CDG 结合的关键。 结论 这些结果揭示了细胞外 CDG 通过与 MD2 直接相互作用和激活 TLR4 信号通路诱导肺损伤,为了解细菌诱导 ALI 的机制和治疗 COVID-19 患者细菌合并感染提供了有价值的新疗法。
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引用次数: 0
Circular RNA LIPH promotes pancreatic cancer glycolysis and progression through sponge miR-769-3p and interaction with GOLM1 环状 RNA LIPH 通过海绵 miR-769-3p 和与 GOLM1 的相互作用促进胰腺癌糖酵解和病情进展
IF 7.9 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2024-08-21 DOI: 10.1002/ctm2.70003
Yan Ma, Xiaomeng He, Yang Di, Wenyang Li, Lixiang Sun, Xin Zhang, Li Xu, Zhihui Bai, Zehuan Li, Lijun Cai, Huaqin Sun, Christopher Corpe, Jin Wang
<p>Dear Editor,</p><p>Pancreatic cancer (PaCa) is a highly malignant tumour of the digestive system and is one of the major causes of cancer-related death worldwide,<span><sup>1-3</sup></span> and only approximately 10% of PaCa patients survive for 1 year after diagnosis.<span><sup>4, 5</sup></span> Thus, investigations into sensitive and specific biomarkers for risk stratification are urgently needed for PaCa. Noncoding RNAs, including circRNAs, function as key ceRNAs (sponges) to regulate the expression of mRNAs, and their discovery greatly expanded the functional genetic information in carcinogenesis.<span><sup>6-8</sup></span> CircRNAs are highly stable, are not easily digested by RNase, and can be detected in the saliva, blood and other body fluids of patients with cancer.<span><sup>9, 10</sup></span></p><p>In this study, we revealed that a novel circular RNA (circLIPH/circ_0068398) was upregulated in pancreatic tumour tissue (Figure 1A). A high expression level of circLIPH was significantly correlated with tumour size, tumour stage and the percentage of Ki67-positive tumours (<i>p</i> < .05; Table S1). circLIPH and lipase H (LIPH) expression levels were also significantly greater in most PaCa cells than in the hTERT-immortalized epithelial (HPNE) control cells (Figure 1C,D). circLIPH is derived from exons 2 to 5 of the LIPH gene and has a length of 669 bp (Figure 1E); we amplified it from cDNA (not from gDNA) via divergent primers (Figure 1F). RNA fluorescence in situ hybridisation revealed circLIPH localisation primarily in the cytoplasm of PaCa cells (Figure 1G). We also demonstrated that circLIPH overexpression promoted the growth of BXPC-3 and PANC-1 cells via CCK-8 assays (Figure S1E,F), whereas si-circLIPH treatment significantly inhibited the proliferation of PaCa cells (Figure S1G,H). Colony formation assays (Figure S1I) revealed that circLIPH overexpression could effectively promote the growth of PaCa cells (Figure S1J) and that si-circLIPH treatment inhibited cancer cell proliferation (Figure S1K). Wound healing (Figure S1L) and Transwell invasion assays (Figure S1O) demonstrated that circLIPH overexpression markedly enhanced the migration (Figure S1M) and invasion abilities (Figure S1P) of PaCa cells, whereas si-circLIPH treatment impaired the migration (Figure S1N) and invasion (Figure S1Q) capabilities of PaCa cells. The protein levels of vimentin and Snail increased after circLIPH overexpression in PaCa cells, whereas the protein level of E-cadherin decreased significantly (Figure S1R), which suggests that circLIPH may serve as an oncogene that facilitates cancer cell progression and promotes the epithelial–mesenchymal transition (EMT) of PaCa cells.</p><p>To elucidate the molecular mechanism of circLIPH, seven candidate miRNAs were identified from the starBase, circBank and circInteractome databases (Figure 2A). Quantitative reverse transcription-polymerase chain reaction (qRT-PCR) analyses revealed that the level of miR-7
伤口愈合(图 3H、I)和 Transwell 试验(图 3K、L)显示,与对照组相比,miR-769-3p 高表达组 PaCa 细胞的迁移和侵袭能力下降。与此相反,miR-769-3p的缺失增加了PaCa细胞的迁移(图3J)和侵袭(图3M)。京都基因和基因组百科全书(KEGG)分析显示,miR-769-3p 的靶基因主要富集在 mTOR 信号通路中(图 3N)。过表达 GOLM1 会显著增加 p-PI3K、p-AKT、p-mTOR、波形蛋白和 Snail1 的蛋白水平,而 si-GOLM1 处理会显著降低这些蛋白的表达水平(图 3O)。过表达 miR-769-3p 不仅会降低 GOLM1、波形蛋白和 Snail1 的表达,还会降低 p-PI3K、p-AKT 和 p-mTOR 的蛋白水平,而在 PaCa 细胞中敲除 miR-769-3p 则会提高 mTOR 相关蛋白的水平(图 3P)。此外,miR-769-3p 处理缓解了 circLIPH 过表达诱导的 mTOR 通路激活(图 3P)。我们的数据表明,miR-769-3p 可通过 mTOR 信号通路抑制 PaCa 细胞的 EMT 进展。此外,细胞外酸化率(ECAR)测试显示,沉默 circLIPH 会减少 BXPC-3 和 PANC-1 细胞质子的产生,并降低细胞外酸化率(图 3Q,R)。最后,我们分析了在异种移植 PaCa 肿瘤模型中瘤内注射 si-circLIPH 的效果(图 4A)。si-circLIPH 处理组的肿瘤体积小于对照组(图 4B)。体内成像显示,si-circLIPH 能显著抑制肿瘤生长(图 4D-G)。qRT-PCR结果显示,相对于对照组和肿瘤组织,circLIPH敲除组中circLIPH、GOLM1、波形蛋白和Snail1的表达水平下调,而miR-769-3p和E-cadherin的表达水平上调(图4H)。免疫组化(IHC)分析显示,对照组肿瘤细胞的细胞质和细胞核中 Snail 呈阳性表达(图 4J),但在 circLIPH 敲除组的肿瘤细胞中则呈弱表达(图 4N);对照组肿瘤细胞的细胞质中波形蛋白呈弱阳性表达(图 4K),但在 circLIPH 敲除组的肿瘤细胞中则几乎不表达(图 4O)。另一方面,circLIPH敲除组肿瘤细胞的细胞质和细胞膜中证实了E-cadherin的阳性表达(图4P),而对照组肿瘤细胞的细胞质和细胞膜中则检测到微弱的表达(图4L),这表明抑制circLIPH抑制了体内的EMT过程。综上所述,我们的研究结果表明,circLIPH可能通过激活miR-769-3p/GOLM1/PI3K/AKT/mTOR轴发挥其致癌生物学效应(图4Q),而si-circLIPH能有效抑制circLIPH的表达,并在体内通过细胞凋亡抑制肿瘤生长。王进构思和设计了实验,获得了项目经费并指导了研究;马艳进行了实验;杨迪收集了临床组织;何晓萌和李文洋分析了数据;孙立祥、张鑫、徐莉、白志辉、李泽环、蔡丽君和孙华琴协助研究并对论文进行了严格审阅;王进、马艳和克里斯托弗-科佩对手稿进行了编辑。所有作者均已阅读并批准最终稿件。作者声明无利益冲突。患者肿瘤组织样本的采集已获得中国复旦大学附属中山医院(厦门)伦理委员会(B2024-018)和上海市公共卫生临床中心(2020-S027-02)的批准。所有动物实验均按照美国国立卫生研究院(NIH)《实验动物的护理和使用指南》进行,并经上海市公共卫生临床中心动物护理委员会批准(2020-A033-01)。
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Clinical and Translational Medicine
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