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Roll with the punches: Fibroblast growth factor 10 alleviates pyroptosis of alveolar epithelial cells in different immune niches 顺势而为:成纤维细胞生长因子10减轻不同免疫龛中肺泡上皮细胞的焦亡。
IF 6.8 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2026-01-02 DOI: 10.1002/ctm2.70569
Tianchang Wei, Xiaoyan Chen, Jian Xu, Weiqi Mao, Zhenlin Yang, Yuhan Wang, Yufan Li, Wenting Jin, Cuicui Chen, Cuiping Zhang, Yuanlin Song
<div> <section> <h3> Background</h3> <p>Acute respiratory distress syndrome (ARDS) is a life-threatening condition characterized by high mortality with no specific treatments. Fibroblast growth factor 10 (FGF10) is recognized for its tissue repair and anti-inflammatory roles in injured lungs; however, its clinical relevance and mechanistic role in ARDS remain unclear.</p> </section> <section> <h3> Methods</h3> <p>Serum FGF10 levels were measured in patients with ARDS and analyzed for associations with clinical outcomes. An LPS-induced mouse model of acute lung injury (ALI) was used to evaluate the effects of FGF10 treatment in vivo. Single-cell RNA sequencing of lineage-traced alveolar epithelial cells (AECs) was performed to identify transcriptional changes following FGF10 administration. In vitro co-culture systems involving macrophages or neutrophils with AECs were established to investigate immune cell-specific mechanisms.</p> </section> <section> <h3> Results</h3> <p>We found that serum FGF10 levels were significantly reduced in ARDS patients, and this reduction correlated with poor prognosis. Moreover, FGF10 treatment alleviated lung inflammation by decreasing inflammatory cell infiltration and pro-inflammatory cytokine release in mice. Leveraging single-cell RNA sequencing of lineage tracing alveolar epithelial cells (AECs), we identified that the mRNA expression of <i>Ripk1</i>, <i>Casp8</i>, and <i>Casp3</i> were decreased after FGF10 treatment. In in vitro co-culture experiments, we noticed that FGF10 did not inhibit macrophage pyroptosis. Instead, FGF10 effectively blocked the downstream RIPK1/caspase-8/caspase-3/gasdermin E (GSDME) signaling pathway in AECs. Additionally, FGF10 suppressed AMP-activated protein kinase (AMPK) activation by modulating ATP production, thereby preventing RIPK1 cleavage.</p> </section> <section> <h3> Conclusion</h3> <p>FGF10 alleviates acute lung injury by inhibiting AMPK-RIPK1/caspase-8/caspase-3/GSDME-mediated pyroptosis in AECs primed by distinct immune cell populations, supporting its potential as a therapeutic strategy for ARDS.</p> </section> <section> <h3> Key points</h3> <div> <ul> <li>Our study reveals a marked decrease of serum FGF10 levels in ARDS patients, correlating with P/F ratio, hospitalisation days and mortality rates.</li> <li>We clarify how FGF10 prevents AECs' pyroptosis triggered by di
背景:急性呼吸窘迫综合征(ARDS)是一种危及生命的疾病,其特点是死亡率高,无特异性治疗。成纤维细胞生长因子10 (FGF10)在肺损伤中具有组织修复和抗炎作用;然而,其在ARDS中的临床相关性和机制作用尚不清楚。方法:检测ARDS患者血清FGF10水平,并分析其与临床结局的关系。采用lps诱导的小鼠急性肺损伤(ALI)模型,在体内评价FGF10的治疗效果。对谱系追踪的肺泡上皮细胞(AECs)进行单细胞RNA测序,以确定FGF10给药后的转录变化。建立了巨噬细胞或中性粒细胞与aec体外共培养系统,以研究免疫细胞特异性机制。结果:我们发现ARDS患者血清FGF10水平显著降低,且这种降低与预后不良相关。此外,FGF10治疗通过降低小鼠炎症细胞浸润和促炎细胞因子释放来减轻肺部炎症。利用对肺泡上皮细胞(AECs)进行谱系追踪的单细胞RNA测序,我们发现FGF10处理后,Ripk1、Casp8和Casp3的mRNA表达降低。在体外共培养实验中,我们注意到FGF10没有抑制巨噬细胞的焦亡。相反,FGF10在aec中有效阻断了下游RIPK1/caspase-8/caspase-3/gasdermin E (GSDME)信号通路。此外,FGF10通过调节ATP的产生抑制amp活化蛋白激酶(AMPK)的激活,从而阻止RIPK1的裂解。结论:FGF10通过抑制AMPK-RIPK1/caspase-8/caspase-3/ gsdme介导的AECs焦亡,减轻急性肺损伤,支持其作为ARDS治疗策略的潜力。重点:我们的研究显示ARDS患者血清FGF10水平显著下降,与P/F比、住院天数和死亡率相关。我们阐明了FGF10如何以不同的方式阻止不同免疫细胞浸润引发的aec焦亡。FGF10恢复ATP水平,通过AMPK减弱RIPK1磷酸化,破坏aec的焦亡。
{"title":"Roll with the punches: Fibroblast growth factor 10 alleviates pyroptosis of alveolar epithelial cells in different immune niches","authors":"Tianchang Wei,&nbsp;Xiaoyan Chen,&nbsp;Jian Xu,&nbsp;Weiqi Mao,&nbsp;Zhenlin Yang,&nbsp;Yuhan Wang,&nbsp;Yufan Li,&nbsp;Wenting Jin,&nbsp;Cuicui Chen,&nbsp;Cuiping Zhang,&nbsp;Yuanlin Song","doi":"10.1002/ctm2.70569","DOIUrl":"10.1002/ctm2.70569","url":null,"abstract":"&lt;div&gt;\u0000 \u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Background&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;Acute respiratory distress syndrome (ARDS) is a life-threatening condition characterized by high mortality with no specific treatments. Fibroblast growth factor 10 (FGF10) is recognized for its tissue repair and anti-inflammatory roles in injured lungs; however, its clinical relevance and mechanistic role in ARDS remain unclear.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Methods&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;Serum FGF10 levels were measured in patients with ARDS and analyzed for associations with clinical outcomes. An LPS-induced mouse model of acute lung injury (ALI) was used to evaluate the effects of FGF10 treatment in vivo. Single-cell RNA sequencing of lineage-traced alveolar epithelial cells (AECs) was performed to identify transcriptional changes following FGF10 administration. In vitro co-culture systems involving macrophages or neutrophils with AECs were established to investigate immune cell-specific mechanisms.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Results&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;We found that serum FGF10 levels were significantly reduced in ARDS patients, and this reduction correlated with poor prognosis. Moreover, FGF10 treatment alleviated lung inflammation by decreasing inflammatory cell infiltration and pro-inflammatory cytokine release in mice. Leveraging single-cell RNA sequencing of lineage tracing alveolar epithelial cells (AECs), we identified that the mRNA expression of &lt;i&gt;Ripk1&lt;/i&gt;, &lt;i&gt;Casp8&lt;/i&gt;, and &lt;i&gt;Casp3&lt;/i&gt; were decreased after FGF10 treatment. In in vitro co-culture experiments, we noticed that FGF10 did not inhibit macrophage pyroptosis. Instead, FGF10 effectively blocked the downstream RIPK1/caspase-8/caspase-3/gasdermin E (GSDME) signaling pathway in AECs. Additionally, FGF10 suppressed AMP-activated protein kinase (AMPK) activation by modulating ATP production, thereby preventing RIPK1 cleavage.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Conclusion&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;FGF10 alleviates acute lung injury by inhibiting AMPK-RIPK1/caspase-8/caspase-3/GSDME-mediated pyroptosis in AECs primed by distinct immune cell populations, supporting its potential as a therapeutic strategy for ARDS.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Key points&lt;/h3&gt;\u0000 \u0000 &lt;div&gt;\u0000 &lt;ul&gt;\u0000 \u0000 &lt;li&gt;Our study reveals a marked decrease of serum FGF10 levels in ARDS patients, correlating with P/F ratio, hospitalisation days and mortality rates.&lt;/li&gt;\u0000 \u0000 &lt;li&gt;We clarify how FGF10 prevents AECs' pyroptosis triggered by di","PeriodicalId":10189,"journal":{"name":"Clinical and Translational Medicine","volume":"16 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2026-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12759039/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145892130","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Melatonin-engineered MSCs-exosomes deliver USP4 to stabilise ARNTL and inhibit clock rhythmic ferroptosis for enhanced flap survival 褪黑素工程的msc -外泌体传递USP4以稳定ARNTL并抑制时钟节律性铁下垂,从而提高皮瓣存活率。
IF 6.8 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2026-01-02 DOI: 10.1002/ctm2.70565
Xiaoqiong Jiang, Yu Wang, Xuanlong Zhang, Huiming Deng, Liangyu Fang, Chaire Tafadzwa, Jiangnan Yao, Hao Chen, Anqi Ye, Kailiang Zhou, Xiangwei Ling, Jian Xiao

Background

This study investigates the impact of sleep restriction (SR) on flap viability and its underlying mechanisms. It reveals that SR triggers clock rhythmic ferroptosis, which leads to impaired skin barrier function and increased flap necrosis.

Methods

A retrospective analysis of sleep quality in 344 patients undergoing flap surgery proved that SR is a risk factor for flap necrosis. Further research demonstrated that SR increases the level of ferroptosis, disrupts the circadian rhythm of ferroptosis and exacerbates flap damage in human and murine models.

Results

In order to address this clinical issue, the use of melatonin (MT)-preconditioned bone marrow mesenchymal stromal cells-derived exosomes (MEXOs) was found to enhance the therapeutic efficacy of flap repair by mitigating clock rhythmic ferroptosis. Mechanistically, MT increased m6A modification to stabilise and enhance the translation of ubiquitin-specific protease 4 (USP4) mRNA within MEXOs. USP4 delivered by MEXOs directly interacted with and deubiquitinated ARNTL, a core circadian regulator, stabilising its protein levels and suppressing ferroptosis in flap.

Conclusions

These findings identify SR-induced clock rhythmic ferroptosis as a critical pathological driver of flap failure and propose a novel exosome-based strategy targeting the USP4–ARNTL axis to enhance skin barrier integrity and flap survival, offering translational potential for clinical reconstructive surgery.

Key points

  1. This study identifies SR-induced clock rhythmic ferroptosis as a pivotal pathological process in flap necrosis.

  2. We reveal a potential therapeutic mechanism in which USP4-enriched MEXOs can effectively repair SR-induced flap necrosis.

  3. USP4-enriched MEXOs represent a novel therapy for SR-induced flap necrosis by stabilizing ARNTL to inhibit clock rhythmic ferroptosis.

背景:本研究旨在探讨睡眠限制对皮瓣活力的影响及其潜在机制。结果表明,SR触发时钟节律性铁下垂,导致皮肤屏障功能受损,皮瓣坏死增加。方法:对344例皮瓣手术患者的睡眠质量进行回顾性分析,证实SR是皮瓣坏死的危险因素。进一步的研究表明,在人和小鼠模型中,SR增加了铁下垂水平,破坏了铁下垂的昼夜节律,加剧了皮瓣损伤。结果:为了解决这一临床问题,使用褪黑素(MT)预处理骨髓间充质基质细胞衍生外泌体(MEXOs)可以通过减轻时钟节律性铁下垂来提高皮瓣修复的治疗效果。从机制上讲,MT增加了m6A修饰,以稳定和增强MEXOs中泛素特异性蛋白酶4 (USP4) mRNA的翻译。由mexo传递的USP4直接与核心昼夜节律调节因子ARNTL相互作用并去泛素化,稳定其蛋白水平并抑制皮瓣铁下垂。结论:这些发现确定了sr诱导的时钟节律性铁上塌是皮瓣失败的关键病理驱动因素,并提出了一种新的基于外泌体的靶向USP4-ARNTL轴的策略,以增强皮肤屏障完整性和皮瓣存活,为临床重建手术提供了转化潜力。本研究确定sr诱导的时钟节律性铁下垂是皮瓣坏死的关键病理过程。我们揭示了一种潜在的治疗机制,其中usp4富集的MEXOs可以有效修复sr诱导的皮瓣坏死。富含usp4的mexo通过稳定ARNTL抑制时钟节律性铁下垂,代表了sr诱导皮瓣坏死的一种新疗法。
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引用次数: 0
Correction to ‘SUMOylation of PUM2 promotes the vasculogenic mimicry of glioma cells via regulating CEBPD’ 更正“PUM2的SUMOylation通过调节CEBPD促进胶质瘤细胞的血管生成模拟”。
IF 6.8 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2026-01-02 DOI: 10.1002/ctm2.70559

Wang D, Ruan X, Liu X, et al. SUMOylation of PUM2 promotes the vasculogenic mimicry of glioma cells via regulating CEBPD. Clin Transl Med. 2020;10(5):e168. doi:10.1002/ctm2.168

[Description of error]

In Figure 2g, the image of the U251 control group was inadvertently taken from an earlier draft version rather than the finalised version. Consequently, the control group image may appear to display a slightly higher apparent cell density compared with the sh-NC group, which could lead to a minor visual misinterpretation.

After carefully re-examining all original data, we confirmed that this mistake was due to the incorrect selection of a representative image for the control group. Therefore, this correction does not alter the results, statistical analyses, or conclusions of the paper.

The corrected version of Figure 2g is provided below. We sincerely apologise for this oversight and for any confusion it may have caused.

王东,阮鑫,刘鑫,等。PUM2的summoylation通过调节CEBPD促进胶质瘤细胞的血管生成模拟。中华临床医学杂志,2010;10(5):518 - 518。在图2g中,U251对照组的图像无意中取自较早的草案版本,而不是最终版本。因此,与sh-NC组相比,对照组图像可能显示出略高的表观细胞密度,这可能导致轻微的视觉误解。在仔细重新检查所有原始数据后,我们确认这个错误是由于不正确地选择了对照组的代表性图像。因此,此更正不会改变论文的结果、统计分析或结论。图2g的更正版本如下:对于这一疏忽以及由此造成的任何混乱,我们深表歉意。
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引用次数: 0
Fallopian tube lavage sampling towards early detection of pre-invasive ovarian cancer 输卵管灌洗取样对侵袭前卵巢癌早期发现的价值。
IF 6.8 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2026-01-02 DOI: 10.1002/ctm2.70557
Melanie Seaton, Sarah Harbach, Joanne Oke, Thomas D. J. Walker, Jessica Dalton-O'Reilly, Julian Selley, Daniel R. Brison, James Bolton, Stefan Meyer, David Knight, Richard J. Edmondson, Christine K. Schmidt
<p>Dear Editor,</p><p>Most high-grade serous ovarian cancer (HGSOC) cases arise from pre-invasive fallopian tube (FT) lesions, known as serous tubal intraepithelial carcinomas (STICs). Yet, despite an estimated 6- to 7-year window-of-opportunity, no clinical test exists for detecting these at an early, treatable stage.<span><sup>1</sup></span> To address this, we developed and applied a novel sampling technique to obtain FT lavage, enabling analysis of early tumour-associated molecular changes in FT-derived biofluids.</p><p>To establish the feasibility of this technique, we collected 27 FT lavages from high-risk <i>BRCA1/2</i> mutation carriers, ovarian neoplasm (ON) patients, and control individuals with benign or non-tubal gynaecological conditions (Figure 1A and B; Supplementary Discussions 1 and 2). Lavages were acquired from FTs directly after surgical removal by inserting a PBS-filled syringe into the FT lumen beyond the fimbrial end and flushing towards the utero-tubal junction (Figure 2A). Sampling away from the fimbriae enabled us to test for signals diffusing from any lesions proximally along the tube, where they would be accessible via minimally invasive trans-cervical falloposcopy,<span><sup>2</sup></span> supporting potential clinical feasibility (Supplementary Discussion 3).</p><p>As FTs were flushed post-surgical removal, effects of blood contamination on downstream analysis were reduced through selective depletion of common blood proteins during sample preparation (Figure 2A), and removal of abundant plasma proteins during analysis (Figure S1). Proteomic analysis revealed > 2000 proteins per sample with significant overlap between samples (Figure S1a and b, Table S1), including FT-resident mucins (MUC16/CA125, MUC5B, MUC5AC) and oviduct-specific glycoprotein 1 (OVGP1). No major differences in the numbers of the top 400 plasma proteins detected were identified between samples (mean ± SD = 316 ± 13.2), and this was proportionally slight (8.7%) compared to overall protein numbers (Figure S1a). Intra-patient comparison showed strong correlation between left and right FT samples for most pairs (<i>R</i><sup>2 </sup>>0.9, Figure S2a–d), overall indicating FT lavage as a promising resource for comparative proteomic analysis across risk and disease states.</p><p>To assess the ability of FT lavage to distinguish between neoplastic and non-neoplastic samples, we compared proteomes of a left and right FT lavage from a patient with a unilateral ovarian neoplasm (MFC6), thereby controlling for inter-patient variability and confounding factors. Despite high overall correlation (<i>R</i><sup>2 </sup>= 0.9933), several tumour-promoting proteins were enriched in the neoplasm-associated FT, such as SPTAN1, which is overexpressed in early OC lesions in the FT,<span><sup>3</sup></span> while tumour suppressor fructose-1,6-bisphosphatase 1 (FBP1)<span><sup>4</sup></span> was reduced (Figure 2B, Table S2), suggesting that our workflow has potenti
大多数高级别浆液性卵巢癌(HGSOC)病例起源于侵袭前输卵管(FT)病变,即浆液性输卵管上皮内癌(STICs)。然而,尽管估计有6到7年的机会窗口,目前还没有临床试验可以在早期发现这些可治疗的阶段为了解决这个问题,我们开发并应用了一种新的采样技术来获得FT灌洗,从而能够分析FT衍生生物体液中早期肿瘤相关的分子变化。为了确定该技术的可行性,我们从高危BRCA1/2突变携带者、卵巢肿瘤(ON)患者和良性或非输卵管妇科疾病的对照个体中收集了27例FT灌洗(图1A和B;补充讨论1和2)。手术切除后直接从FTs中进行灌洗,将一个充满pbs的注射器插入叶缘末端以外的FT管腔,并向子宫-输卵管交界处冲洗(图2A)。远离菌毛的采样使我们能够检测任何病变近端沿输卵管扩散的信号,在那里可以通过微创经宫颈输卵管镜检查,2支持潜在的临床可行性(补充讨论3)。由于FTs在手术后被冲洗,通过在样品制备过程中选择性地去除常见的血液蛋白(图2A)和在分析过程中去除丰富的血浆蛋白(图S1),降低了血液污染对下游分析的影响。蛋白质组学分析显示,每个样品中有2000个蛋白存在显著的重叠(图S1a和b,表S1),包括FT-resident粘蛋白(MUC16/CA125, MUC5B, MUC5AC)和输卵管特异性糖蛋白1 (OVGP1)。样品之间检测到的前400种血浆蛋白的数量没有明显差异(mean±SD = 316±13.2),与总蛋白数量相比,这一比例很小(8.7%)(图S1a)。患者内部比较显示,大多数对左、右FT样本之间具有很强的相关性(R2 &gt;0.9,图S2a-d),总体上表明FT灌洗是跨风险和疾病状态比较蛋白质组学分析的有前途的资源。为了评估FT灌洗区分肿瘤和非肿瘤样本的能力,我们比较了单侧卵巢肿瘤患者(MFC6)左、右FT灌洗的蛋白质组,从而控制了患者间的变异性和混杂因素。尽管总体相关性很高(R2 = 0.9933),但肿瘤相关的FT中富集了几种促进肿瘤的蛋白,如SPTAN1,它在FT的早期OC病变中过度表达3,而肿瘤抑制因子果糖-1,6-双磷酸酶1 (FBP1)4则减少(图2B,表S2),这表明我们的工作流程有潜力识别与肿瘤进展和局部肿瘤变化相关的FT灌洗蛋白。接下来,我们假设高危人群的一个子集可能已经表现出与疾病进展相关的早期分子变化,通过与癌症相关的FT谱的比较可以检测到。因此,我们比较了高风险和卵巢肿瘤组与低风险对照组的FT灌洗蛋白质组(图2C)。支持我们的假设,在brca1 /2突变组和卵巢肿瘤组中,82种蛋白通常比对照组升高两倍以上或等于两倍(图2D,表S1和S2)。有相当比例的蛋白代表了女性生殖系统,除了鉴定出之前与OC无关的蛋白外,我们还发现了其他在OC进展、转移和预后中具有确定作用的蛋白(图2D,表S2)。关键蛋白包括PTGFRN,在OC患者的血浆中比对照组更频繁检测到,ITGA6,与OC细胞的增殖和转移增加有关,6和ZBP1,据报道,在brca1突变的细胞中,OC7中有一种坏死坏死介质,其增强子区在brca1突变的细胞中过表达,与我们的brca突变的FT灌胃中ZBP1的富集一致值得注意的是,研究人员发现了几种用于晚期疾病和OC药物靶点的生物标志物,强调了早期检测的潜在相关性。细胞成分富集突出了细胞外蛋白和细胞膜蛋白作为主要的基因本体,以及细胞外囊泡(图S3a),表明分泌活性增加是这些蛋白的潜在来源。功能蛋白网络和聚类分析显示与肌动蛋白、细胞凋亡、纤毛和信号传导相关的网络(图S3b)。中心EGFR簇与ITGA6、EPCAM和其他参与癌症通路的因子,包括MAPK和PI3K-AKT相关(表S2)。其他簇包括与癌变和FT上皮相关的蛋白质。不同风险/卵巢肿瘤组的分层聚类显示,brca1 /2突变组具有相似的蛋白谱(图S3c)。 此外,对照组与单侧肿瘤妇女未受影响的FTs密切相关。值得注意的是,后者没有用于定义蛋白质特征,这强调了我们的方法在癌症早期检测方面的潜力。进一步对个体洗脑进行分层聚类,发现两个主要聚类,对照和大多数brca突变样本与卵巢肿瘤明显分离,反映了平均和大多数高风险FTs之间的预期分子相似性(图3A)。然而,在一个brca1突变个体中,来自其FTs的灌洗液单独聚集,brca12与HGSOC样本聚集更紧密(图3A)。为了确定这种异常的分子谱是否与组织学变化相关,我们进一步检查了两个FTs边缘末端FFPE块的H&amp;E切片。结果显示,在一个FT中有一个STIC病变,其形态典型,p53表达异常,免疫组化显示Ki67增殖指数升高(图3B)。根据SEE-FIM协议,病变在最初的标准切片和完全取样叶缘末端时未被检测到。虽然一个实例不足以得出确切的结论,但考虑到在更深的切片中进一步检测到STIC病变的罕见性,这不太可能是偶然的(补充讨论4)。为了验证我们的发现并进一步确定其与STIC鉴定的相关性,我们对来自3名患者的独立队列的5个STIC病变进行了免疫荧光染色(图4A和B)。ITGA6、EGFR和EPCAM是从我们的82个候选蛋白特征中选择出来的,因为它们在我们的STRING网络中的中心地位,并预测了它们在未来治疗靶向中的表面存在。与邻近的健康FT上皮(FTE)相比,tic中ITGA6的染色一致增加,而EPCAM的改变不太明显(图4B和C)。尽管EGFR强度存在差异,但健康FTE的强根尖染色与tic的弥漫性染色形成对比(图4D和E),反映了极性丧失10,并提示了FT液体中蛋白质积累的不同机制。总之,我们在FTs灌洗中发现了一个候选特征,可以在高风险BRCA突变携带者中回顾性识别STIC病变。虽然需要在更大的队列中进行进一步的探索和验证(补充讨论5),但我们的研究结果指出了一个有希望的方向,即采用侵入性卵巢癌风险管理策略,可以帮助延迟或消除侵入性预防性手术的需要,同时保留高风险妇女的生育能力。该项目由CKS和RJE构思和监督。MS和SH在JO, TDJW和JDO'R的支持下进行了实验,并进行了数据分析和解释。JS和DK进行了质谱工作流程。JB提供病理专业知识并进行回顾性STIC评估。SM和DRB为相关临床环境提供了重要的见解。所有作者审阅并讨论了研究结果,并对稿件提供了反馈。作者承认由BBSRC大卫菲利普斯奖学金(BB/N019997/1至CKS), MRC研究资助(MR/X008754/1至CKS), CRUK国际癌症早期检测联盟(ced)计划资助(卵巢癌新颖早期标志物(NEMO) - ACEPGM-2023/100001),曼彻斯特学术健康科学中心妇女和儿童领域先进技术泵启动奖,以及MCRC/CRUK和CRUK MB博士奖学金给MS和JO。作者声明无利益冲突。输卵管灌洗液和福尔马林固定石蜡包埋输卵管组织通过曼彻斯特大学NHS基金会信托(MFT)生物库获得,该生物库根据人体组织管理局(HTA)批准的伦理申请(REC14/NW/1260和REC19/NW/0644)获得。所有患者均提供书面知情同意书,并被纳入前瞻性研究。所使用的方法和技术的细节在补充方法部分中概述。输卵管灌洗质谱蛋白质组学数据见表S1。原始数据可以通过PRIDE存储库(登录号:PXD072299)访问。
{"title":"Fallopian tube lavage sampling towards early detection of pre-invasive ovarian cancer","authors":"Melanie Seaton,&nbsp;Sarah Harbach,&nbsp;Joanne Oke,&nbsp;Thomas D. J. Walker,&nbsp;Jessica Dalton-O'Reilly,&nbsp;Julian Selley,&nbsp;Daniel R. Brison,&nbsp;James Bolton,&nbsp;Stefan Meyer,&nbsp;David Knight,&nbsp;Richard J. Edmondson,&nbsp;Christine K. Schmidt","doi":"10.1002/ctm2.70557","DOIUrl":"10.1002/ctm2.70557","url":null,"abstract":"&lt;p&gt;Dear Editor,&lt;/p&gt;&lt;p&gt;Most high-grade serous ovarian cancer (HGSOC) cases arise from pre-invasive fallopian tube (FT) lesions, known as serous tubal intraepithelial carcinomas (STICs). Yet, despite an estimated 6- to 7-year window-of-opportunity, no clinical test exists for detecting these at an early, treatable stage.&lt;span&gt;&lt;sup&gt;1&lt;/sup&gt;&lt;/span&gt; To address this, we developed and applied a novel sampling technique to obtain FT lavage, enabling analysis of early tumour-associated molecular changes in FT-derived biofluids.&lt;/p&gt;&lt;p&gt;To establish the feasibility of this technique, we collected 27 FT lavages from high-risk &lt;i&gt;BRCA1/2&lt;/i&gt; mutation carriers, ovarian neoplasm (ON) patients, and control individuals with benign or non-tubal gynaecological conditions (Figure 1A and B; Supplementary Discussions 1 and 2). Lavages were acquired from FTs directly after surgical removal by inserting a PBS-filled syringe into the FT lumen beyond the fimbrial end and flushing towards the utero-tubal junction (Figure 2A). Sampling away from the fimbriae enabled us to test for signals diffusing from any lesions proximally along the tube, where they would be accessible via minimally invasive trans-cervical falloposcopy,&lt;span&gt;&lt;sup&gt;2&lt;/sup&gt;&lt;/span&gt; supporting potential clinical feasibility (Supplementary Discussion 3).&lt;/p&gt;&lt;p&gt;As FTs were flushed post-surgical removal, effects of blood contamination on downstream analysis were reduced through selective depletion of common blood proteins during sample preparation (Figure 2A), and removal of abundant plasma proteins during analysis (Figure S1). Proteomic analysis revealed &gt; 2000 proteins per sample with significant overlap between samples (Figure S1a and b, Table S1), including FT-resident mucins (MUC16/CA125, MUC5B, MUC5AC) and oviduct-specific glycoprotein 1 (OVGP1). No major differences in the numbers of the top 400 plasma proteins detected were identified between samples (mean ± SD = 316 ± 13.2), and this was proportionally slight (8.7%) compared to overall protein numbers (Figure S1a). Intra-patient comparison showed strong correlation between left and right FT samples for most pairs (&lt;i&gt;R&lt;/i&gt;&lt;sup&gt;2 &lt;/sup&gt;&gt;0.9, Figure S2a–d), overall indicating FT lavage as a promising resource for comparative proteomic analysis across risk and disease states.&lt;/p&gt;&lt;p&gt;To assess the ability of FT lavage to distinguish between neoplastic and non-neoplastic samples, we compared proteomes of a left and right FT lavage from a patient with a unilateral ovarian neoplasm (MFC6), thereby controlling for inter-patient variability and confounding factors. Despite high overall correlation (&lt;i&gt;R&lt;/i&gt;&lt;sup&gt;2 &lt;/sup&gt;= 0.9933), several tumour-promoting proteins were enriched in the neoplasm-associated FT, such as SPTAN1, which is overexpressed in early OC lesions in the FT,&lt;span&gt;&lt;sup&gt;3&lt;/sup&gt;&lt;/span&gt; while tumour suppressor fructose-1,6-bisphosphatase 1 (FBP1)&lt;span&gt;&lt;sup&gt;4&lt;/sup&gt;&lt;/span&gt; was reduced (Figure 2B, Table S2), suggesting that our workflow has potenti","PeriodicalId":10189,"journal":{"name":"Clinical and Translational Medicine","volume":"16 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2026-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12759042/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145892126","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Pan-cancer multi-omics reveals DCAF7 as an immune-modulating prognostic driver and Wnt/β-catenin activator in hepatocellular carcinoma 泛癌多组学显示DCAF7在肝细胞癌中是免疫调节预后驱动因子和Wnt/β-catenin激活因子。
IF 6.8 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-12-31 DOI: 10.1002/ctm2.70572
Ruina Luan, Hanbin Lin, Xin Zhao, Jianpeng Li, Maohe Chen, Shiping Luo, Xinjian Lin
<div> <section> <h3> Background</h3> <p>DDB1 and CUL4-associated factor 7 (DCAF7) is a WD-repeat adaptor that recruits substrates to the CUL4DDB1 ubiquitinligase complex, but its pan-cancer relevance and mechanistic contribution to tumor progression remain unclear.</p> </section> <section> <h3> Methods</h3> <p>Multi-omics datasets (genomic, transcriptomic, epigenomic, proteomic and single-cell) from 33 tumor types were integrated to define DCAF7 expression, regulation, and clinical significance. Somatic alterations and copy-number variation were analysed across cohorts, and promoter methylation and RNA modification signatures were interrogated. Immune associations were assessed by computational deconvolution and checkpoint-gene profiling. Pathway and network analyses were performed to infer DCAF7-linked programmes. Mechanistic and functional validation was conducted in hepatocellular carcinoma (LIHC) cell lines (HepG2, Huh7) using DCAF7 perturbation and pharmacologic Wnt inhibition.</p> </section> <section> <h3> Results</h3> <p>DCAF7 was overexpressed in most cancers, consistent with copy-number gain, focal promoter hypomethylation and putative m<sup>6</sup>A-linked post-transcriptional regulation, whereas hypermethylation at two CpG loci predicted poor prognosis in LIHC. DCAF7 alterations, predominantly amplifications, were associated with shorter overall survival in LIHC and positively correlated with DCAF7 mRNA abundance across cohorts. Immunogenomic analyses linked high DCAF7 to CD4<sup>+</sup> T-cell enrichment, broad upregulation of checkpoint genes (PD-1/PD-L1, CTLA-4, TIGIT), and increased tumour mutational burden, microsatellite instability and neoantigen load, suggesting an immune-evasive phenotype. Network and enrichment analyses converged on canonical Wnt/β-catenin, Hippo and cell-cycle programs. In vitro, DCAF7 promoted LIHC cell proliferation and migration by stabilising β-catenin via increased inhibitory Ser9 phosphorylation of GSK-3β, thereby inducing c-Myc and cyclin D1; DCAF7 knockdown or the Wnt inhibitor XAV939 attenuated these effects. Drug-response modelling further predicted increased sensitivity of DCAF7-high tumours to 17-AAG, docetaxel and alsterpaullone.</p> </section> <section> <h3> Conclusions</h3> <p>DCAF7 is frequently activated by genetic and epigenetic mechanisms across cancers, associates with an immunotherapy-relevant tumour immune milieu, and drives Wnt/β-catenindependent malignant phenotypes in LIHC. These findings support DCAF7 as a prognostic biomarker and a candidate therapeutic target, particularly for strat
背景:DDB1和cul4相关因子7 (DCAF7)是一种WD-repeat接头,可向CUL4DDB1泛素连接酶复合物募集底物,但其泛癌相关性和对肿瘤进展的机制贡献尚不清楚。方法:整合来自33种肿瘤类型的多组学数据(基因组学、转录组学、表观基因组学、蛋白质组学和单细胞组学),确定DCAF7的表达、调控及其临床意义。体细胞改变和拷贝数变异在队列中进行了分析,启动子甲基化和RNA修饰特征被询问。通过计算反褶积和检查点基因谱来评估免疫关联。进行通路和网络分析以推断dcaf7相关程序。在肝细胞癌(LIHC)细胞系(HepG2, Huh7)中,通过DCAF7的扰动和Wnt的药理学抑制进行了机制和功能验证。结果:DCAF7在大多数癌症中过表达,与拷贝数增加、局灶启动子低甲基化和推测的m6a相关的转录后调控一致,而两个CpG位点的高甲基化预示着LIHC的不良预后。DCAF7的改变(主要是扩增)与LIHC患者较短的总生存期相关,并与各组DCAF7 mRNA丰度呈正相关。免疫基因组学分析将高DCAF7与CD4+ t细胞富集、检查点基因(PD-1/PD-L1、CTLA-4、TIGIT)的广泛上调以及肿瘤突变负担、微卫星不稳定性和新抗原负荷增加联系起来,表明存在免疫逃避表型。网络和富集分析集中在典型的Wnt/β-catenin、Hippo和细胞周期程序上。在体外,DCAF7通过增加抑制GSK-3β的Ser9磷酸化来稳定β-catenin,从而诱导c-Myc和cyclin D1,从而促进LIHC细胞的增殖和迁移;DCAF7敲除或Wnt抑制剂XAV939可减弱这些作用。药物反应模型进一步预测dcaf7高肿瘤对17-AAG、多西紫杉醇和阿斯特保龙的敏感性增加。结论:DCAF7在癌症中经常被遗传和表观遗传机制激活,与免疫治疗相关的肿瘤免疫环境相关,并在LIHC中驱动Wnt/β- catenen不依赖的恶性表型。这些发现支持DCAF7作为预后生物标志物和候选治疗靶点,特别是在LIHC分层干预中。重点:DCAF7在多种肿瘤中表达上调,并与不良预后相关,尤其是在LIHC中。DCAF7高表达与CD4+ T细胞浸润、免疫检查点基因上调和肿瘤突变负担增加有关,提示其在肿瘤免疫逃逸中起作用。DCAF7通过增强GSK-3β Ser9磷酸化来稳定β-catenin,从而驱动c-Myc/cyclin D1表达,促进LIHC的增殖和迁移。高dcaf7肿瘤对17-AAG、多西他赛和CDK/GSK-3抑制剂具有治疗脆弱性,揭示了潜在的靶向治疗策略。
{"title":"Pan-cancer multi-omics reveals DCAF7 as an immune-modulating prognostic driver and Wnt/β-catenin activator in hepatocellular carcinoma","authors":"Ruina Luan,&nbsp;Hanbin Lin,&nbsp;Xin Zhao,&nbsp;Jianpeng Li,&nbsp;Maohe Chen,&nbsp;Shiping Luo,&nbsp;Xinjian Lin","doi":"10.1002/ctm2.70572","DOIUrl":"10.1002/ctm2.70572","url":null,"abstract":"&lt;div&gt;\u0000 \u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Background&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;DDB1 and CUL4-associated factor 7 (DCAF7) is a WD-repeat adaptor that recruits substrates to the CUL4DDB1 ubiquitinligase complex, but its pan-cancer relevance and mechanistic contribution to tumor progression remain unclear.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Methods&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;Multi-omics datasets (genomic, transcriptomic, epigenomic, proteomic and single-cell) from 33 tumor types were integrated to define DCAF7 expression, regulation, and clinical significance. Somatic alterations and copy-number variation were analysed across cohorts, and promoter methylation and RNA modification signatures were interrogated. Immune associations were assessed by computational deconvolution and checkpoint-gene profiling. Pathway and network analyses were performed to infer DCAF7-linked programmes. Mechanistic and functional validation was conducted in hepatocellular carcinoma (LIHC) cell lines (HepG2, Huh7) using DCAF7 perturbation and pharmacologic Wnt inhibition.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Results&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;DCAF7 was overexpressed in most cancers, consistent with copy-number gain, focal promoter hypomethylation and putative m&lt;sup&gt;6&lt;/sup&gt;A-linked post-transcriptional regulation, whereas hypermethylation at two CpG loci predicted poor prognosis in LIHC. DCAF7 alterations, predominantly amplifications, were associated with shorter overall survival in LIHC and positively correlated with DCAF7 mRNA abundance across cohorts. Immunogenomic analyses linked high DCAF7 to CD4&lt;sup&gt;+&lt;/sup&gt; T-cell enrichment, broad upregulation of checkpoint genes (PD-1/PD-L1, CTLA-4, TIGIT), and increased tumour mutational burden, microsatellite instability and neoantigen load, suggesting an immune-evasive phenotype. Network and enrichment analyses converged on canonical Wnt/β-catenin, Hippo and cell-cycle programs. In vitro, DCAF7 promoted LIHC cell proliferation and migration by stabilising β-catenin via increased inhibitory Ser9 phosphorylation of GSK-3β, thereby inducing c-Myc and cyclin D1; DCAF7 knockdown or the Wnt inhibitor XAV939 attenuated these effects. Drug-response modelling further predicted increased sensitivity of DCAF7-high tumours to 17-AAG, docetaxel and alsterpaullone.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Conclusions&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;DCAF7 is frequently activated by genetic and epigenetic mechanisms across cancers, associates with an immunotherapy-relevant tumour immune milieu, and drives Wnt/β-catenindependent malignant phenotypes in LIHC. These findings support DCAF7 as a prognostic biomarker and a candidate therapeutic target, particularly for strat","PeriodicalId":10189,"journal":{"name":"Clinical and Translational Medicine","volume":"16 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2025-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12754573/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145862350","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Single-nucleus RNA sequencing reveals the distinct heterogeneity of primary pulmonary sarcomas (PPS) and pulmonary sarcomatoid carcinoma (PSC) 单核RNA测序揭示了原发性肺肉瘤(PPS)和肺肉瘤样癌(PSC)的明显异质性。
IF 6.8 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-12-30 DOI: 10.1002/ctm2.70566
Jianfei Zhu, Yanlu Xiong, Shouzheng Ma, Jun Wei, Jiakuan Chen, Wenchen Wang, Qianqian Duan, Qin Zhang, Dongsheng Chen, Wanglong Deng, Tao Jiang, Jie Lei
<div> <section> <h3> Background</h3> <p>Primary pulmonary sarcomas (PPS) and pulmonary sarcomatoid carcinoma (PSC) are rare and aggressive diseases that pose significant diagnostic challenges, requiring extensive sampling and comprehensive evaluation. To date, the single-cell characteristics and distinctions between these two conditions have not been thoroughly investigated.</p> </section> <section> <h3> Methods</h3> <p>In this study, we employed single-nucleus RNA sequencing (snRNA-seq) to characterise the cellular heterogeneity of PSC and PPS. Our analysis included 20 PSC samples, seven PPS samples and two non-malignant control samples obtained from adjacent normal tissue.</p> </section> <section> <h3> Results</h3> <p>Our results revealed that the majority of cells in PSC were of epithelial origin, while fibroblasts predominated in PPS. Specifically, AT2 cells, a major source of epithelial cells in PSC, underwent malignant transformation primarily through epithelial–mesenchymal transition, suggesting AT2 cells may serve as the origin of PSC. High Mobility Group AT-Hook 2 (HMGA2) expression was elevated in malignant AT2 cells of PSC and correlated with an unfavourable prognosis. Moreover, MET-mutated patients have a significantly higher expression level of HMGA2 (<i>p</i> < .001). In PPS, fibroblasts constituted the majority, only lipofibroblasts exhibited malignant features. A direct comparison between PSC and PPS lipofibroblasts revealed largely similar expression profiles, with the exception of an enrichment in DNA repair pathways specifically observed in PPS lipofibroblasts.</p> </section> <section> <h3> Conclusion</h3> <p>These findings provide novel insights of PSC and PPS at the single-cell level.</p> </section> <section> <h3> Key points</h3> <div> <ul> <li><b>Distinct Cellular Origins</b>: PSC arises primarily from epithelial (AT2) cells via EMT, whereas PPS is predominantly fibroblast-derived.</li> <li><b>Prognostic Driver HMGA2</b>: Elevated HMGA2 in malignant AT2 cells correlates with poor prognosis and is significantly higher in MET-mutated PSC.</li> <li><b>Pathway Divergence in Malignant Cells</b>: Malignant lipofibroblasts in PPS share a similar profile with PSC but uniquely enrich DNA repair pathways.</li> </ul> </div> </section>
背景:原发性肺肉瘤(PPS)和肺肉瘤样癌(PSC)是罕见的侵袭性疾病,对诊断提出了重大挑战,需要广泛的采样和全面的评估。迄今为止,这两种情况的单细胞特征和区别尚未得到彻底的研究。方法:在本研究中,我们采用单核RNA测序(snRNA-seq)表征PSC和PPS的细胞异质性。我们的分析包括20个PSC样本,7个PPS样本和2个来自邻近正常组织的非恶性对照样本。结果:我们的研究结果显示,PSC中大多数细胞是上皮细胞,而PPS中以成纤维细胞为主。具体来说,作为PSC上皮细胞主要来源的AT2细胞主要通过上皮-间质转化发生恶性转化,提示AT2细胞可能是PSC的起源。高迁移率组AT-Hook 2 (HMGA2)在PSC恶性AT2细胞中表达升高,与不良预后相关。此外,met突变的患者HMGA2的表达水平显著升高(p)。结论:这些发现在单细胞水平上为PSC和PPS提供了新的见解。不同的细胞起源:PSC主要由上皮细胞(AT2)通过EMT产生,而PPS主要来源于成纤维细胞。预后驱动因素HMGA2:恶性AT2细胞中HMGA2升高与预后不良相关,在met突变的PSC中显著升高。恶性细胞的途径分化:PPS中的恶性脂肪成纤维细胞与PSC具有相似的特征,但独特地丰富了DNA修复途径。
{"title":"Single-nucleus RNA sequencing reveals the distinct heterogeneity of primary pulmonary sarcomas (PPS) and pulmonary sarcomatoid carcinoma (PSC)","authors":"Jianfei Zhu,&nbsp;Yanlu Xiong,&nbsp;Shouzheng Ma,&nbsp;Jun Wei,&nbsp;Jiakuan Chen,&nbsp;Wenchen Wang,&nbsp;Qianqian Duan,&nbsp;Qin Zhang,&nbsp;Dongsheng Chen,&nbsp;Wanglong Deng,&nbsp;Tao Jiang,&nbsp;Jie Lei","doi":"10.1002/ctm2.70566","DOIUrl":"10.1002/ctm2.70566","url":null,"abstract":"&lt;div&gt;\u0000 \u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Background&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;Primary pulmonary sarcomas (PPS) and pulmonary sarcomatoid carcinoma (PSC) are rare and aggressive diseases that pose significant diagnostic challenges, requiring extensive sampling and comprehensive evaluation. To date, the single-cell characteristics and distinctions between these two conditions have not been thoroughly investigated.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Methods&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;In this study, we employed single-nucleus RNA sequencing (snRNA-seq) to characterise the cellular heterogeneity of PSC and PPS. Our analysis included 20 PSC samples, seven PPS samples and two non-malignant control samples obtained from adjacent normal tissue.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Results&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;Our results revealed that the majority of cells in PSC were of epithelial origin, while fibroblasts predominated in PPS. Specifically, AT2 cells, a major source of epithelial cells in PSC, underwent malignant transformation primarily through epithelial–mesenchymal transition, suggesting AT2 cells may serve as the origin of PSC. High Mobility Group AT-Hook 2 (HMGA2) expression was elevated in malignant AT2 cells of PSC and correlated with an unfavourable prognosis. Moreover, MET-mutated patients have a significantly higher expression level of HMGA2 (&lt;i&gt;p&lt;/i&gt; &lt; .001). In PPS, fibroblasts constituted the majority, only lipofibroblasts exhibited malignant features. A direct comparison between PSC and PPS lipofibroblasts revealed largely similar expression profiles, with the exception of an enrichment in DNA repair pathways specifically observed in PPS lipofibroblasts.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Conclusion&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;These findings provide novel insights of PSC and PPS at the single-cell level.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Key points&lt;/h3&gt;\u0000 \u0000 &lt;div&gt;\u0000 &lt;ul&gt;\u0000 \u0000 &lt;li&gt;&lt;b&gt;Distinct Cellular Origins&lt;/b&gt;: PSC arises primarily from epithelial (AT2) cells via EMT, whereas PPS is predominantly fibroblast-derived.&lt;/li&gt;\u0000 \u0000 &lt;li&gt;&lt;b&gt;Prognostic Driver HMGA2&lt;/b&gt;: Elevated HMGA2 in malignant AT2 cells correlates with poor prognosis and is significantly higher in MET-mutated PSC.&lt;/li&gt;\u0000 \u0000 &lt;li&gt;&lt;b&gt;Pathway Divergence in Malignant Cells&lt;/b&gt;: Malignant lipofibroblasts in PPS share a similar profile with PSC but uniquely enrich DNA repair pathways.&lt;/li&gt;\u0000 &lt;/ul&gt;\u0000 &lt;/div&gt;\u0000 &lt;/section&gt;\u0000 ","PeriodicalId":10189,"journal":{"name":"Clinical and Translational Medicine","volume":"16 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2025-12-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12753329/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145862379","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
CLINICAL AND TRANSLATIONAL MEDICINE 临床和转化医学
IF 6.8 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-12-28 DOI: 10.1002/ctm2.70585
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引用次数: 0
RNF39 promotes colorectal cancer progression by driving RINT1 degradation and suppressing ER stress-induced apoptosis RNF39通过驱动RINT1降解和抑制内质网应激诱导的细胞凋亡来促进结直肠癌的进展。
IF 6.8 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-12-28 DOI: 10.1002/ctm2.70577
Lu Chen, Chunluan Yuan, Teng Yu, Kaiyuan Hui, Xiuming Li, Xiaozhu Shen, Xiaodong Jiang, Bin Liu
<div> <section> <h3> Background</h3> <p>Colorectal adenocarcinoma (COAD) cells exploit stress-adaptation programs, such as the unfolded protein response (UPR), to survive in hostile tumour microenvironments. However, the role of specific E3 ubiquitin ligases in regulating these survival pathways remains poorly understood. We investigated Ring Finger Protein 39 (RNF39), an E3 ligase previously implicated in immune signalling, as a potential regulator of COAD progression.</p> </section> <section> <h3> Methods</h3> <p>We analyzed RNF39 expression using public transcriptomic datasets (TCGA, GEO) and a clinical COAD cohort via immunohistochemistry. Functional roles were assessed in COAD cell lines using shRNA knockdown, CRISPR/Cas9 knockout, and overexpression systems. In vitro assays (proliferation, invasion, colony formation) and in vivo xenograft models were employed. Mechanistic investigations included co-immunoprecipitation, ubiquitination assays, chromatin immunoprecipitation, and luciferase reporter assays to delineate the MEF2D-RNF39-RINT1 axis.</p> </section> <section> <h3> Results</h3> <p>RNF39 was aberrantly upregulated in COAD tissues, and its high expression correlated with poor patient survival. We identified the transcription factor MEF2D as a direct activator of RNF39. Functionally, RNF39 promoted COAD cell proliferation and invasion in vitro and tumour growth in vivo, dependent on its E3 ligase activity. Mechanistically, RNF39 directly interacted with, polyubiquitinated (K48-linked), and promoted the proteasomal degradation of RAD50-interacting protein 1 (RINT1). Consequently, RNF39 depletion stabilized RINT1, amplified the UPR and CHOP expression, and sensitized cells to ER stress-induced apoptosis. Crucially, the anti-tumour phenotypes of RNF39 loss were partially reversed by simultaneous RINT1 knockdown.</p> </section> <section> <h3> Conclusion</h3> <p>RNF39 acts as a pro-tumorigenic E3 ligase in COAD by driving the degradation of RINT1, thereby suppressing ER stress-induced apoptosis and promoting malignant progression. Our findings delineate a novel MEF2D-RNF39-RINT1 signalling axis that governs tumour cell adaptation to stress. Targeting RNF39 could represent a promising therapeutic strategy to overcome stress resistance in COAD.</p> </section> <section> <h3> Key points</h3> <div> <ul> <li>RNF39 is identified as an oncogenic E3 ubiquitin ligase that is upregulated in col
背景:结直肠癌(COAD)细胞利用应激适应程序,如未折叠蛋白反应(UPR),在敌对的肿瘤微环境中生存。然而,特异性E3泛素连接酶在调节这些生存途径中的作用仍然知之甚少。我们研究了环指蛋白39 (RNF39),一种先前与免疫信号有关的E3连接酶,作为COAD进展的潜在调节因子。方法:我们使用公共转录组数据集(TCGA, GEO)和临床COAD队列通过免疫组织化学分析RNF39表达。使用shRNA敲除、CRISPR/Cas9敲除和过表达系统评估COAD细胞系的功能作用。采用体外实验(增殖、侵袭、菌落形成)和体内异种移植物模型。机制研究包括共免疫沉淀、泛素化测定、染色质免疫沉淀和荧光素酶报告基因测定,以描绘MEF2D-RNF39-RINT1轴。结果:RNF39在COAD组织中异常上调,其高表达与患者生存差相关。我们发现转录因子MEF2D是RNF39的直接激活因子。在功能上,RNF39通过其E3连接酶活性促进COAD细胞体外增殖和侵袭以及体内肿瘤生长。机制上,RNF39直接与多泛素化(k48连接)相互作用,并促进rad50相互作用蛋白1 (RINT1)的蛋白酶体降解。因此,RNF39缺失稳定了RINT1,扩增了UPR和CHOP的表达,并使细胞对内质网应激诱导的凋亡敏感。至关重要的是,RNF39缺失的抗肿瘤表型通过同时下调RINT1而部分逆转。结论:RNF39在COAD中作为促瘤性E3连接酶,通过驱动RINT1降解,从而抑制内质网应激诱导的细胞凋亡,促进恶性进展。我们的研究结果描绘了一种新的MEF2D-RNF39-RINT1信号轴,该信号轴控制肿瘤细胞对压力的适应。靶向RNF39可能是一种很有前途的治疗策略,可以克服COAD的应激抗性。重点:RNF39是一种致癌E3泛素连接酶,在结直肠癌中表达上调,与预后不良相关。在机制上,RNF39靶向肿瘤抑制因子RINT1,以实现k48相关的多泛素化和蛋白酶体降解。通过降解RINT1, RNF39抑制未折叠蛋白反应(UPR),限制内质网(ER)应激诱导的细胞凋亡,从而促进肿瘤进展。该研究揭示了一种新的MEF2D-RNF39-RINT1轴调控应激适应,将RNF39定位为结直肠癌的潜在预后生物标志物和治疗靶点。
{"title":"RNF39 promotes colorectal cancer progression by driving RINT1 degradation and suppressing ER stress-induced apoptosis","authors":"Lu Chen,&nbsp;Chunluan Yuan,&nbsp;Teng Yu,&nbsp;Kaiyuan Hui,&nbsp;Xiuming Li,&nbsp;Xiaozhu Shen,&nbsp;Xiaodong Jiang,&nbsp;Bin Liu","doi":"10.1002/ctm2.70577","DOIUrl":"10.1002/ctm2.70577","url":null,"abstract":"&lt;div&gt;\u0000 \u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Background&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;Colorectal adenocarcinoma (COAD) cells exploit stress-adaptation programs, such as the unfolded protein response (UPR), to survive in hostile tumour microenvironments. However, the role of specific E3 ubiquitin ligases in regulating these survival pathways remains poorly understood. We investigated Ring Finger Protein 39 (RNF39), an E3 ligase previously implicated in immune signalling, as a potential regulator of COAD progression.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Methods&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;We analyzed RNF39 expression using public transcriptomic datasets (TCGA, GEO) and a clinical COAD cohort via immunohistochemistry. Functional roles were assessed in COAD cell lines using shRNA knockdown, CRISPR/Cas9 knockout, and overexpression systems. In vitro assays (proliferation, invasion, colony formation) and in vivo xenograft models were employed. Mechanistic investigations included co-immunoprecipitation, ubiquitination assays, chromatin immunoprecipitation, and luciferase reporter assays to delineate the MEF2D-RNF39-RINT1 axis.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Results&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;RNF39 was aberrantly upregulated in COAD tissues, and its high expression correlated with poor patient survival. We identified the transcription factor MEF2D as a direct activator of RNF39. Functionally, RNF39 promoted COAD cell proliferation and invasion in vitro and tumour growth in vivo, dependent on its E3 ligase activity. Mechanistically, RNF39 directly interacted with, polyubiquitinated (K48-linked), and promoted the proteasomal degradation of RAD50-interacting protein 1 (RINT1). Consequently, RNF39 depletion stabilized RINT1, amplified the UPR and CHOP expression, and sensitized cells to ER stress-induced apoptosis. Crucially, the anti-tumour phenotypes of RNF39 loss were partially reversed by simultaneous RINT1 knockdown.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Conclusion&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;RNF39 acts as a pro-tumorigenic E3 ligase in COAD by driving the degradation of RINT1, thereby suppressing ER stress-induced apoptosis and promoting malignant progression. Our findings delineate a novel MEF2D-RNF39-RINT1 signalling axis that governs tumour cell adaptation to stress. Targeting RNF39 could represent a promising therapeutic strategy to overcome stress resistance in COAD.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Key points&lt;/h3&gt;\u0000 \u0000 &lt;div&gt;\u0000 &lt;ul&gt;\u0000 \u0000 &lt;li&gt;RNF39 is identified as an oncogenic E3 ubiquitin ligase that is upregulated in col","PeriodicalId":10189,"journal":{"name":"Clinical and Translational Medicine","volume":"16 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2025-12-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12745170/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145848857","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A multi-omic biomarker signature in pre-treatment rectal tumours stratifies patients with different pathological responses to neoadjuvant treatment 治疗前直肠肿瘤的多组学生物标志物标记对新辅助治疗不同病理反应的患者进行分层。
IF 6.8 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-12-26 DOI: 10.1002/ctm2.70576
Laura E. Kane, Croí E. Buckley, Rebecca M. O'Brien, Meghana S. Menon, Aisling B. Heeran, Xiaofei Yin, Timothy S. Nugent, Noel E. Donlon, John V Reynolds, Adnan Hafeez, Diarmuid S. O'Ríordáin, Robert A. Hannon, Paul Neary, Reza Kalbassi, Brian J. Mehigan, Paul H. McCormick, Cara Dunne, John O. Larkin, Lorraine Brennan, Michael E. Kelly, Jacintha O'Sullivan, Niamh Lynam-Lennon
<p>Dear Editor,</p><p>Rectal cancer (RC) incidence is rising, particularly in individuals < 50 years, who present with aggressive, treatment-refractory tumours.<span><sup>1</sup></span> Resistance to neoadjuvant treatment (neo-tx) is a significant problem, with no biomarkers of response currently in use. Tumours of similar clinical characteristics can have vastly different responses to neo-tx, suggesting the dichotomy in response is due to differences in the tumour molecular environment. Alterations in mitochondrial function and energy metabolism play a role in the pathogenesis of gastrointestinal cancers,<span><sup>2, 3</sup></span> implicating the metabolome as a potential untapped source of predictive biomarkers. To address this unmet need, we performed multi-omic analysis of metabolomic and transcriptomic profiles from normal, non-cancer rectal tissue and pre-treatment RC biopsies (Supporting Information) to identify alterations associated with the pathogenesis of RC.</p><p>Liquid chromatography-mass spectrometry revealed 29 metabolites significantly altered in RC tissue (<i>n </i>= 32) compared to non-cancer rectal tissue (<i>n </i>= 20) (Figure 1A). Pathway analysis uncovered 65 upregulated and four downregulated pathways significantly associated with altered metabolites (Figure 1B). Most altered metabolites were lipid molecules or mediators of lipid metabolism, suggesting that remodelling of lipid metabolism is a feature of RC. Diacyl phosphatidylcholines (PCs) are important mediators of lipid metabolism, supporting other studies highlighting a role for choline metabolism and lipid remodelling in tumourigenesis.<span><sup>4</sup></span> SM C18:0 and SM (OH) C22:1 are sphingolipids, important structural lipid components of biological membranes, which support the physiological function of the colon and are deregulated in RC.<span><sup>5</sup></span> Interestingly, cancer cells hydrolyse sphingomyelin to maintain production of PCs,<span><sup>4</sup></span> suggesting a mechanism for the concomitant increase in PCs and decrease in sphingomyelins demonstrated in RC here.</p><p>Real-time metabolic analysis demonstrated that (Figure 1C)OCR rates and OCR/ECAR ratios were significantly decreased in RC compared to non-cancer rectal tissue, highlighting metabolic remodelling in RC. Inhibition of mitochondrial metabolism results in accelerated turnover of PCs in neuronal cells,<span><sup>6</sup></span> suggesting a mechanism underlying the altered choline metabolism demonstrated in RC.</p><p>Transcriptomics revealed 2337 genes differentially expressed between RC (<i>n </i>= 31) and non-cancer rectal tissue (<i>n </i>= 28) (Figure 1D). Pathway analysis revealed 41 upregulated and seven downregulated pathways significantly associated with altered genes (Figure 1E). Interestingly, several of the most altered genes play roles in mitochondrial respiration. <i>ND2</i>, <i>ND3</i> and <i>ND5</i> encode subunits of the NADH dehydrogenase enzyme, a crucial
亲爱的编辑,直肠癌(RC)的发病率正在上升,特别是在50岁以上的个体中,他们表现出侵袭性,难治性肿瘤对新辅助治疗(neo-tx)的耐药是一个重要的问题,目前还没有生物标志物的反应。临床特征相似的肿瘤可能对neo-tx有截然不同的反应,这表明反应的二分法是由于肿瘤分子环境的差异。线粒体功能和能量代谢的改变在胃肠道癌症的发病机制中发挥作用,2,3暗示代谢组是一种潜在的未开发的预测性生物标志物来源。为了解决这一未满足的需求,我们对正常、非癌性直肠组织和治疗前直肠癌活检的代谢组学和转录组学进行了多组学分析,以确定与直肠癌发病机制相关的改变。液相色谱-质谱分析显示,与非癌直肠组织(n = 20)相比,癌组织中有29种代谢物显著改变(n = 32)(图1A)。通路分析发现65条上调通路和4条下调通路与代谢产物改变显著相关(图1B)。大多数改变的代谢物是脂质分子或脂质代谢介质,这表明脂质代谢的重塑是RC的一个特征。二酰基磷脂酰胆碱(PCs)是脂质代谢的重要介质,支持其他研究强调胆碱代谢和脂质重塑在肿瘤发生中的作用SM C18:0和SM (OH) C22:1是鞘脂,是生物膜的重要结构脂质成分,支持结肠的生理功能,在RC中不受调节。有趣的是,癌细胞水解鞘磷脂以维持pc的产生,这表明在RC中证明了pc同时增加和鞘磷脂减少的机制。实时代谢分析显示(图1C),与非癌性直肠组织相比,癌性直肠组织的OCR率和OCR/ECAR比值显著降低,突出了癌性直肠组织的代谢重塑。线粒体代谢的抑制导致神经元细胞中pc的更新加速,6这表明在RC中证实了胆碱代谢改变的机制。转录组学显示,有2337个基因在直肠癌组织(n = 31)和非癌直肠组织(n = 28)之间存在差异表达(图1D)。通路分析显示41条上调通路和7条下调通路与基因改变显著相关(图1E)。有趣的是,一些改变最多的基因在线粒体呼吸中起作用。ND2, ND3和ND5编码NADH脱氢酶的亚基,NADH脱氢酶是电子传递链的关键组成部分,支持在RC组织中显示的改变的OCR。在治疗前的RC活检中,改变的代谢物与OCR、ECAR、OCR/ECAR比值以及几个临床变量(包括改进的Ryan肿瘤反应评分(TRS))有显著相关性(TRS1 =完全缓解,TRS1 =接近完全缓解,TRS2 =部分缓解)(图2A)。两种代谢物与TRS显著相关:血清素和lysoPC a C16:1(图2B)。无监督分层聚类在TRS2中显示出良好的分组,TRS0和TRS1之间几乎没有区别,表明两者之间的表达谱相似(图2C)。只有lysoPC a C16:1与临床变量有显著相关性(图2D)。SLC6A4在CRC组织中的表达,其转录5 -羟色胺,对无复发生存无显著影响(图2E),而SLC6A4的低表达导致进展后生存显著恶化(图2F)。5 -羟色胺可增强结肠癌患者的放射敏感性,7提示TRS2患者血清素降低是neo-tx耐药的机制之一。改变的基因与几个临床变量有显著相关性(图3A)。RPL30和CXCL14在TRS2中显著上调,而SNORA81、SNORD50A、LCN2和SNORA64在TRS2中与TRS0相比显著下调(图3B)。RPL30的表达增加与癌基因MYC的扩增有关,从而促进细胞毒性治疗的耐药性在一些癌症中,SNORD50A的缺失与较差的生存结果相关有趣的是,SNORD50A结合并抑制癌基因KRAS, SNORD50A的耗尽导致MAPK级联的激活,9参与肿瘤对治疗的耐药,10提示在RC中neo-tx耐药的潜在作用。基于基因表达的TRS分离得到了改进,TRS0和TRS2区分明显(图3C)。一些基因与临床变量有显著相关性(图3D)。低CXCL14表达与总体(图3E)和进展后生存期(图3F)明显较差相关。 高RPL30与较长的总生存期显著相关(图3G);然而,它导致无复发生存(图3H)和进展后生存(图3I)显著恶化,这与TRS2患者的高RPL30一致。同样,低LCN2表达与较差的总生存率相关(图3J)。改变的基因和代谢物被整合到一个8个特征的多组学生物标志物面板中。由于没有匹配的TRS3患者转录组数据,只有TRS0 (n = 3)、TRS1 (n = 6)和TRS2 (n = 5)组可以纳入最终分析。TRS0和TRS2分别使用这8个特征进行聚类,TRS1分布在它们之间(图4A)。主成分分析显示了类似的模式,血清素、SNORA64、SNORD50A、SNORA81、RPL30和CXCL14对组分离的贡献最大(图4B)。单独检查各特征的表达情况,TRS0和TRS2的单独特征表达水平较高,而TRS1位于TRS0和TRS2的范围内(图4C)。留一交叉验证表明,TRS0与TRS1/TRS2的区别较差(曲线下面积[AUC] = 0.273,灵敏度= 0%,特异性= 54.5%),可能是由于组间样本的不平衡(TRS0 = 3, TRS1/TRS2 = 11),因此不能准确地代表这些组间面板的性能(图4D)。与TRS2相比,TRS0的分类准确率要高得多(AUC = 0.933,灵敏度= 100%,特异性= 80%),这与观察到的不同表达谱一致(图4B,C)。最后,在该试点队列中,TRS0/TRS1与TRS2表现出完美的分类(AUC = 1, Sensitivity = 100%, Specificity = 100%),表明总体而言,TRS2患者的表达谱与TRS0和TRS1不同,两者之间的关系更为密切(图4D)。在一个试点队列中,我们证明直肠肿瘤具有代谢和转录组重塑,强调脂质代谢改变是直肠肿瘤的共同特征,提出了一种新的治疗靶向方法。我们还确定了一个新的多组学8-生物标志物面板,在代表全TRS谱的独立队列验证后,有潜力作为neo-tx病理反应的预测标志,以改善患者分层。劳拉e凯恩:数据策展,正式分析和写作-原始草案。Croí E. Buckley:调查,数据管理和形式分析。丽贝卡·M. o .布莱恩:数据管理和资源。Meghana S. Menon:数据管理和资源。Aisling B. Heeran:数据管理和资源。尹晓飞:调查与形式分析。Timothy S. Nugent:临床样本和临床数据。Noel E. Donlon:临床样本和临床数据。约翰·v·雷诺兹:资源。Adnan Hafeez:临床样本。Diarmuid S. O.R-ordáin:临床样本。Robert A. Hannon:临床样本。Paul Neary:临床样本。Reza Kalbassi:临床样本。Brian J. Mehigan:临床样本。Paul H. McCormick:临床样本。卡拉·邓恩:临床样本。John O. Larkin:临床样本。洛林·布伦南:形式分析和写作——审查和编辑。迈克尔E.凯利:临床样本,临床数据和写作-审查和编辑。贾辛塔O.沙利文:概念,监督和写作-审查和编辑。概念化、监督、资金获取、写作。原稿和写作-审查和编辑。作者声明无利益冲突。这项研究由卫生研究委员会(爱尔兰)资助,资助号:EIA-2017-020。我们也感谢SFI研究基础设施计划下的综合分子分析平台(CMAP)的资助,参考编号:18/RI/5702。勒。凯恩得到了爱尔兰研究基
{"title":"A multi-omic biomarker signature in pre-treatment rectal tumours stratifies patients with different pathological responses to neoadjuvant treatment","authors":"Laura E. Kane,&nbsp;Croí E. Buckley,&nbsp;Rebecca M. O'Brien,&nbsp;Meghana S. Menon,&nbsp;Aisling B. Heeran,&nbsp;Xiaofei Yin,&nbsp;Timothy S. Nugent,&nbsp;Noel E. Donlon,&nbsp;John V Reynolds,&nbsp;Adnan Hafeez,&nbsp;Diarmuid S. O'Ríordáin,&nbsp;Robert A. Hannon,&nbsp;Paul Neary,&nbsp;Reza Kalbassi,&nbsp;Brian J. Mehigan,&nbsp;Paul H. McCormick,&nbsp;Cara Dunne,&nbsp;John O. Larkin,&nbsp;Lorraine Brennan,&nbsp;Michael E. Kelly,&nbsp;Jacintha O'Sullivan,&nbsp;Niamh Lynam-Lennon","doi":"10.1002/ctm2.70576","DOIUrl":"10.1002/ctm2.70576","url":null,"abstract":"&lt;p&gt;Dear Editor,&lt;/p&gt;&lt;p&gt;Rectal cancer (RC) incidence is rising, particularly in individuals &lt; 50 years, who present with aggressive, treatment-refractory tumours.&lt;span&gt;&lt;sup&gt;1&lt;/sup&gt;&lt;/span&gt; Resistance to neoadjuvant treatment (neo-tx) is a significant problem, with no biomarkers of response currently in use. Tumours of similar clinical characteristics can have vastly different responses to neo-tx, suggesting the dichotomy in response is due to differences in the tumour molecular environment. Alterations in mitochondrial function and energy metabolism play a role in the pathogenesis of gastrointestinal cancers,&lt;span&gt;&lt;sup&gt;2, 3&lt;/sup&gt;&lt;/span&gt; implicating the metabolome as a potential untapped source of predictive biomarkers. To address this unmet need, we performed multi-omic analysis of metabolomic and transcriptomic profiles from normal, non-cancer rectal tissue and pre-treatment RC biopsies (Supporting Information) to identify alterations associated with the pathogenesis of RC.&lt;/p&gt;&lt;p&gt;Liquid chromatography-mass spectrometry revealed 29 metabolites significantly altered in RC tissue (&lt;i&gt;n &lt;/i&gt;= 32) compared to non-cancer rectal tissue (&lt;i&gt;n &lt;/i&gt;= 20) (Figure 1A). Pathway analysis uncovered 65 upregulated and four downregulated pathways significantly associated with altered metabolites (Figure 1B). Most altered metabolites were lipid molecules or mediators of lipid metabolism, suggesting that remodelling of lipid metabolism is a feature of RC. Diacyl phosphatidylcholines (PCs) are important mediators of lipid metabolism, supporting other studies highlighting a role for choline metabolism and lipid remodelling in tumourigenesis.&lt;span&gt;&lt;sup&gt;4&lt;/sup&gt;&lt;/span&gt; SM C18:0 and SM (OH) C22:1 are sphingolipids, important structural lipid components of biological membranes, which support the physiological function of the colon and are deregulated in RC.&lt;span&gt;&lt;sup&gt;5&lt;/sup&gt;&lt;/span&gt; Interestingly, cancer cells hydrolyse sphingomyelin to maintain production of PCs,&lt;span&gt;&lt;sup&gt;4&lt;/sup&gt;&lt;/span&gt; suggesting a mechanism for the concomitant increase in PCs and decrease in sphingomyelins demonstrated in RC here.&lt;/p&gt;&lt;p&gt;Real-time metabolic analysis demonstrated that (Figure 1C)OCR rates and OCR/ECAR ratios were significantly decreased in RC compared to non-cancer rectal tissue, highlighting metabolic remodelling in RC. Inhibition of mitochondrial metabolism results in accelerated turnover of PCs in neuronal cells,&lt;span&gt;&lt;sup&gt;6&lt;/sup&gt;&lt;/span&gt; suggesting a mechanism underlying the altered choline metabolism demonstrated in RC.&lt;/p&gt;&lt;p&gt;Transcriptomics revealed 2337 genes differentially expressed between RC (&lt;i&gt;n &lt;/i&gt;= 31) and non-cancer rectal tissue (&lt;i&gt;n &lt;/i&gt;= 28) (Figure 1D). Pathway analysis revealed 41 upregulated and seven downregulated pathways significantly associated with altered genes (Figure 1E). Interestingly, several of the most altered genes play roles in mitochondrial respiration. &lt;i&gt;ND2&lt;/i&gt;, &lt;i&gt;ND3&lt;/i&gt; and &lt;i&gt;ND5&lt;/i&gt; encode subunits of the NADH dehydrogenase enzyme, a crucial ","PeriodicalId":10189,"journal":{"name":"Clinical and Translational Medicine","volume":"16 1","pages":""},"PeriodicalIF":6.8,"publicationDate":"2025-12-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12743138/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145843204","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
FABP4-mediated lipid droplet accumulation drives epithelial–mesenchymal transition and aggravates alveolar epithelial barrier disruption fabp4介导的脂滴积累驱动上皮-间质转化,加重肺泡上皮屏障破坏。
IF 6.8 1区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2025-12-26 DOI: 10.1002/ctm2.70563
Zihao Shen, Yuanpu Qi, Mingyu Chu, Minchao Wu, Chen Feng, Xiangyu Li, Zhaoyang Liu, Linjie Si, Yongliang Wang, Jialin Zhang, Xiaoning Lu, Peng Lu

Background

Acute respiratory distress syndrome (ARDS) frequently develops after cardiopulmonary bypass (CPB), with lung ischemia/reperfusion injury (LIRI) as a major contributing factor. However, the role of fatty acid-binding protein 4 (FABP4) in the pathogenesis of CPB-associated ARDS remains poorly understood.

Methods

Experimental LIRI models were established in vivo and in vitro to investigate the role of FABP4 in alveolar epithelial injury. Lipid droplets (LDs) accumulation, fatty acid (FA) metabolism, epithelial-mesenchymal transition (EMT), and alveolar epithelial barrier (AEB) integrity were assessed using molecular, cellular, and functional approaches. Pharmacological and genetic interventions were applied to evaluate the contribution of FABP4-mediated signaling pathways.

Results

LIRI induced autocrine FABP4 signaling in alveolar epithelial cells, leading to pronounced LDs accumulation and disruption of AEB integrity. FABP4 activation enhanced FA metabolism and promoted EMT, which played a critical role in epithelial barrier dysfunction. Mechanistically, FABP4 activated the p38 MAPK pathway, resulting in ULK1 phosphorylation, suppression of lipophagy, and subsequent LDs formation, thereby driving EMT. Inhibition of LDs accumulation effectively attenuated EMT and alleviated AEB disruption.

Conclusion

FABP4 serves as a key metabolic regulator linking lipid reprogramming to EMT and alveolar epithelial barrier disruption during LIRI. Targeting FABP4-mediated lipid metabolism may represent a promising therapeutic strategy for preventing ARDS following CPB.

Key points

  • LIRI induces autocrine FABP4 signaling in alveolar epithelial cells.
  • FABP4 promotes lipid droplets accumulation by inhibiting lipophagy through p38 MAPKULK1 signaling.
  • FABP4-driven lipid metabolic reprogramming triggers EMT and disrupts alveolar epithelial barrier integrity.
  • Targeting FABP4 or lipid droplets accumulation may offer therapeutic potential for CPB-associated ARDS.
背景:急性呼吸窘迫综合征(ARDS)在体外循环(CPB)术后经常发生,肺缺血/再灌注损伤(LIRI)是主要的诱发因素。然而,脂肪酸结合蛋白4 (FABP4)在cpb相关ARDS发病机制中的作用尚不清楚。方法:采用活体和体外LIRI模型,研究FABP4在肺泡上皮损伤中的作用。脂滴(ld)积累、脂肪酸(FA)代谢、上皮-间质转化(EMT)和肺泡上皮屏障(AEB)完整性通过分子、细胞和功能方法进行评估。应用药理学和遗传学干预来评估fabp4介导的信号通路的作用。结果:LIRI诱导肺泡上皮细胞自分泌FABP4信号,导致明显的LDs积累和AEB完整性破坏。FABP4激活增强FA代谢,促进EMT,在上皮屏障功能障碍中起关键作用。在机制上,FABP4激活p38 MAPK通路,导致ULK1磷酸化,抑制脂噬,并随后形成ld,从而驱动EMT。抑制LDs积累有效地减弱了EMT,减轻了AEB的破坏。结论:FABP4是LIRI期间脂质重编程与EMT和肺泡上皮屏障破坏之间的关键代谢调节因子。靶向fabp4介导的脂质代谢可能是预防CPB后ARDS的一种有希望的治疗策略。重点:LIRI诱导肺泡上皮细胞自分泌FABP4信号。FABP4通过p38 MAPKULK1信号传导抑制脂噬,促进脂滴积累。fabp4驱动的脂质代谢重编程触发EMT并破坏肺泡上皮屏障的完整性。靶向FABP4或脂滴积聚可能为cpb相关ARDS提供治疗潜力。
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引用次数: 0
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Clinical and Translational Medicine
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