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Low-energy glycine formation and spectral masking in star-forming regions. 恒星形成区的低能甘氨酸形成和光谱掩蔽。
IF 6.2 2区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2026-01-06 DOI: 10.1038/s42004-025-01870-y
Eric Mates-Torres, Albert Rimola

The presence of amino acids in comets and meteorites has long suggested that prebiotic molecules may have formed in space and contributed to the origins of life on Earth. Glycine, the simplest amino acid, has been identified in several extraterrestrial environments, although its detection in the interstellar medium, including prestellar cores and protostellar regions, remains elusive. Here, we investigate a novel catalytic pathway for glycine formation on silicate grains during relatively warm (> 150 K) stages of star formation. Using atomistic simulations, the feasibility of a Strecker-type synthesis and a direct neutral mechanism involving reactivity between formaldehyde, carbon monoxide and ammonia on forsterite surfaces, the major constituent of interstellar dust, is assessed. Results show that the Strecker pathway is limited by high activation barriers, whereas the proposed direct mechanism proceeds through low-energy surface-stabilized intermediates leading to spontaneous formation of glycine in a single-barrier exoergic process. Additionally, glycine strongly adsorbs onto the mineral surface and is unlikely to desorb under warm conditions. A vibrational analysis reveals that glycine formed through this pathway exhibits spectrally distinct features, including suppression and shifting of characteristic bands, which may account for its persistent non-detection in astronomical observations.

长期以来,彗星和陨石中氨基酸的存在表明,益生元分子可能是在太空中形成的,并对地球上生命的起源做出了贡献。甘氨酸是最简单的氨基酸,已经在几个地外环境中被发现,尽管它在星际介质(包括星前核心和原恒星区域)中的探测仍然难以捉摸。在这里,我们研究了在相对温暖(bb0 ~ 150k)的恒星形成阶段在硅酸盐颗粒上形成甘氨酸的一种新的催化途径。利用原子模拟,评估了斯特莱克式合成和直接中性机制的可行性,该机制涉及甲醛,一氧化碳和氨在星际尘埃的主要成分forsterite表面的反应性。结果表明,Strecker途径受到高激活障碍的限制,而提出的直接机制是通过低能量的表面稳定中间体在单屏障的外能过程中自发形成甘氨酸。此外,甘氨酸强烈吸附在矿物表面,在温暖的条件下不太可能解吸。振动分析表明,通过这一途径形成的甘氨酸在光谱上表现出明显的特征,包括特征波段的抑制和移动,这可能是其在天文观测中持续未被发现的原因。
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引用次数: 0
Convex Hartree-Fock theory for modeling ground state conical intersections. 模拟基态圆锥交点的凸Hartree-Fock理论。
IF 6.2 2区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2026-01-05 DOI: 10.1038/s42004-025-01842-2
Federico Rossi, Henrik Koch

Accurate modeling of conical intersections is crucial in nonadiabatic molecular dynamics, as these features govern processes such as radiationless transitions and photochemical reactions. Conventional electronic structure methods, including Hartree-Fock, density functional theory, and their time-dependent extensions, struggle in this regime. Due to their single reference nature and separate treatment of ground and excited states, they fail to capture ground state intersections. Multiconfigurational approaches overcome these limitations, but at a prohibitive computational cost. In this work, we propose a modified Hartree-Fock framework, referred to as Convex Hartree-Fock, that optimizes the reference within a tailored subspace by removing projections along selected Hessian eigenvectors. The ground and excited states are then obtained through subsequent Hamiltonian diagonalization. We validate the approach across several test cases and benchmark its performance against time-dependent Hartree-Fock within the Tamm-Dancoff approximation.

锥形交点的精确建模在非绝热分子动力学中是至关重要的,因为这些特征控制着诸如无辐射跃迁和光化学反应等过程。传统的电子结构方法,包括Hartree-Fock,密度泛函理论,以及它们的时间相关扩展,在这种情况下挣扎。由于它们的单一参考性质和基态和激发态的单独处理,它们无法捕获基态交集。多配置方法克服了这些限制,但计算成本高得令人望而却步。在这项工作中,我们提出了一个改进的Hartree-Fock框架,称为凸Hartree-Fock,它通过去除沿选定的Hessian特征向量的投影来优化定制子空间中的引用。然后通过随后的哈密顿对角化得到基态和激发态。我们在几个测试用例中验证了该方法,并在tam - dancoff近似中根据时间相关的Hartree-Fock对其性能进行了基准测试。
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引用次数: 0
2025 Editors' highlights. 2025编辑要闻。
IF 6.2 2区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2026-01-05 DOI: 10.1038/s42004-025-01884-6
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引用次数: 0
Modelling and estimation of chemical reaction yields from high-throughput experiments. 高通量实验中化学反应产率的建模和估计。
IF 6.2 2区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2026-01-03 DOI: 10.1038/s42004-025-01866-8
Tatyana Krivobokova, Razvan-Andrei Morariu, Gianluca Finocchio, Boris Maryasin

Machine learning (ML) and artificial intelligence (AI) techniques are transforming the way chemical reactions are studied today. Datasets from high-throughput experimentation (HTE) are generated to better understand the reaction conditions crucial for outcomes such as yields and selectivities. However, it is often overlooked that datasets from such designed experiments possess a specific structure, which can be captured by a statistical model. Ignoring these data structures when applying ML/AI algorithms can result in misleading conclusions. In contrast, leveraging knowledge about the data-generating process yields reliable, interpretable, and comprehensive insights into reaction mechanisms. A particularly complex dataset is available for the Buchwald-Hartwig amination. Using this dataset, a statistical model for such HTE-generated chemical data is introduced, and a parameter estimation algorithm is developed. Based on the estimated model, new insights into the Buchwald-Hartwig amination are discussed. Our approach is applicable to a wide range of HTE-generated data for chemical reactions and beyond.

机器学习(ML)和人工智能(AI)技术正在改变当今研究化学反应的方式。生成高通量实验(HTE)的数据集,以便更好地了解对产率和选择性等结果至关重要的反应条件。然而,经常被忽视的是,来自这种设计实验的数据集具有特定的结构,可以通过统计模型捕获。在应用ML/AI算法时忽略这些数据结构可能会导致误导性结论。相反,利用关于数据生成过程的知识可以产生对反应机制的可靠的、可解释的和全面的见解。一个特别复杂的数据集可用于Buchwald-Hartwig检验。利用该数据集,介绍了该类化学数据的统计模型,并开发了参数估计算法。基于估计模型,讨论了对Buchwald-Hartwig模型的新见解。我们的方法适用于广泛的hte生成的化学反应和其他数据。
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引用次数: 0
Rapid vinyl thianthrenium tetrafluoroborate-promoted thioacid-based native chemical ligation and its applications in chemical protein synthesis. 快速四氟硼酸乙烯基噻吩促进硫代酸天然化学连接及其在化学蛋白质合成中的应用。
IF 6.2 2区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2026-01-02 DOI: 10.1038/s42004-025-01811-9
Hanghang Li, Shujuan Xu, Zhichao Zhang, Rujie Xie, Jingying Liu, Junjie Ma, Congshen Zheng, Changmai Chen, Wei Chen, Jiaan Liu

Native chemical ligation (NCL) has emerged as the most extensively employed chemoselective reaction in chemical protein synthesis (CPS). Nevertheless, the inherently low reactivity of peptide alkyl thioesters often necessitates the use of excessive nucleophilic additives in NCL to facilitate the reaction. Herein, we describe a rapid, and additive-free peptide ligation reaction between peptide thioacid and N-terminal cysteinyl peptide without epimerization in the present vinyl thianthrenium tetrafluoroborate (VTT). VTT promotes quantitative and chemoselective activation of fully unprotected C-terminal peptide thioacids into thioester intermediates, which demonstrate exceptional reactivity, facilitating rapid NCL in an additive-free manner with high yields. This additive-free strategy is fully compatible with post-ligation desulfurization, allowing for a streamlined one-pot process that enhances the overall efficiency and simplicity of CPS workflows. The effectiveness of this methodology is demonstrated by synthesizing hyalomin-3 from two fragments through a one-pot thioesterification-ligation-desulfurization protocol and ubiquitin through a one-pot C-to-N sequential three-segment condensation (six steps in one pot).

天然化学结扎(NCL)是化学蛋白合成(CPS)中应用最广泛的化学选择反应。然而,肽烷基硫酯固有的低反应性往往需要在NCL中使用过量的亲核添加剂来促进反应。在此,我们描述了在目前的四氟硼酸乙烯硫铵(VTT)中,肽硫酸和n端半胱氨酸肽之间的快速、无添加剂的肽连接反应,没有外映体化。VTT促进了完全无保护的c端肽硫酸在硫酯中间体中的定量和化学选择性活化,这些中间体表现出特殊的反应性,促进了无添加剂、高产率的快速NCL。这种无添加剂的策略与结扎后脱硫完全兼容,允许简化的一锅过程,提高了CPS工作流程的整体效率和简单性。通过一锅硫代酯化-连接-脱硫工艺从两个片段合成透明蛋白-3,通过一锅c - n顺序三段缩合(一锅六步)合成泛素,证明了该方法的有效性。
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引用次数: 0
Trimorphism of a binary cocrystal system with hydrogen-bonded zig-zag, double helix and quadruple helix structures. 具有氢键之字形、双螺旋和四螺旋结构的二元共晶体系的三态性。
IF 6.2 2区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-31 DOI: 10.1038/s42004-025-01856-w
Andrew J E Duncan, Celymar Ortiz-de León, María G Vasquez-Ríos, Dale C Swenson, Leonard R MacGillivray

Helices are present in the most important biomolecules (i.e., RNA, DNA). Helices are formed in biology and the laboratory using subunits with information encoded based on molecular recognition. The production of abiotic helical structures is an ongoing goal in synthetic and materials chemistry and has involved the development of organic and metal-organic materials that rely on complementarity of noncovalent forces (e.g. hydrogen bonds, coordination bonds) for helix formation. Herein, we describe a series of supramolecular isomers of three hydrogen-bonded organic cocrystals involving components that self-assemble and show progression at the structural level from a zig-zag chain to a double helix and to a quadruple helix. The isomers constitute a form of trimorphism involving a binary cocrystal system and we show that the polymeric structures can be interconverted through solvent-mediated phase transformations. We demonstrate the cocrystal involving the double helix to possess components that undergo an intermolecular [2 + 2] photodimerization in the crystalline state.

螺旋存在于最重要的生物分子中(如RNA、DNA)。在生物学和实验室中,螺旋是用基于分子识别编码信息的亚基形成的。非生物螺旋结构的生产是合成和材料化学的一个持续目标,涉及有机和金属-有机材料的发展,这些材料依赖于非共价力(如氢键、配位键)的互补性来形成螺旋。在本文中,我们描述了一系列三个氢键有机共晶的超分子异构体,涉及自组装成分,并在结构水平上显示从锯齿链到双螺旋和四螺旋的进展。这些同分异构体构成了一种涉及二元共晶体系的三聚体形式,我们表明聚合物结构可以通过溶剂介导的相变相互转化。我们证明了涉及双螺旋的共晶具有在晶体状态下经历分子间[2 + 2]光二聚化的成分。
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引用次数: 0
Recent advances in mechanistic studies and catalyst development for electrochemical nitrate reduction to ammonia. 硝酸电化学还原制氨机理研究及催化剂开发进展。
IF 6.2 2区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-31 DOI: 10.1038/s42004-025-01864-w
Debasish Halder, Sujan Sen, Sounak Roy

Increasing nitrate (NO3-) concentration in water bodies due to anthropogenic activities has become a leading environmental challenge of the 21st century. Electrochemical nitrate reduction reaction (eNO3RR) offers a sustainable solution by simultaneously removing nitrates and producing ammonia, a valuable feedstock. However, eNO3RR possesses significant challenges, such as efficiency, competing reactions, product selectivity, catalyst stability, etc. This review article highlights the importance of eNO3RR, its mechanistic pathway, in-situ/operando techniques to understand the mechanistic pathway, reactor design, analytical challenges in product estimation, and catalyst designing strategies. This work uniquely integrates in-situ studies, mechanistic insights, and design principles to establish clear structure-activity correlations for advancing eNO3RR catalysts. We conclude with current challenges and prospects to guide future research toward efficient and selective catalysts for eNO3RR-driven ammonia production.

人类活动导致水体中硝态氮(NO3-)浓度升高已成为21世纪面临的主要环境挑战。电化学硝酸还原反应(eNO3RR)通过同时去除硝酸盐和产生氨(一种有价值的原料)提供了一种可持续的解决方案。然而,eNO3RR在效率、竞争反应、产物选择性、催化剂稳定性等方面面临着重大挑战。这篇综述文章强调了eNO3RR的重要性,它的机制途径,原位/operando技术来理解机制途径,反应器设计,产品估计中的分析挑战,以及催化剂设计策略。这项工作独特地整合了原位研究,机理见解和设计原则,为推进en3rr催化剂建立了明确的结构-活性相关性。最后,我们总结了当前面临的挑战和展望,以指导未来研究高效和选择性的en3rr驱动制氨催化剂。
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引用次数: 0
Recyclable and efficient silica-supported copper hydrogenation catalyst. 可回收高效的硅载体铜加氢催化剂。
IF 6.2 2区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-29 DOI: 10.1038/s42004-025-01867-7
Anjali Katkar, Krishnamay Pal, Ajit Garade, Anant R Kapdi

Many hydrogenation reactions still depend on noble-metal catalysts, which limits their broader use because of high cost and supply concerns. Developing effective catalysts from abundant materials that operate under mild reaction conditions remains a significant challenge. Here, we show the preparation of a copper silicate catalyst using an ammonia evaporation method that delivers exceptional performance in converting nitroarenes to anilines. The catalyst maintains high activity and stability, providing yields above 99 percent under mild conditions. Structural and surface analyses reveal well-dispersed copper species whose combined contributions promote both hydrogen activation and substrate conversion. This behaviour enables a cost-effective and sustainable alternative to noble-metal catalysts. The material also demonstrates robust recyclability, retaining activity over repeated use, and scale-up tests confirm its practical viability. These results highlight the promise of copper-based systems for efficient and industrially relevant hydrogenation processes.

许多氢化反应仍然依赖于贵金属催化剂,这限制了它们的广泛应用,因为高成本和供应问题。从丰富的材料中开发出在温和反应条件下运行的有效催化剂仍然是一个重大挑战。在这里,我们展示了使用氨蒸发方法制备硅酸铜催化剂,该方法在将硝基芳烃转化为苯胺方面具有优异的性能。该催化剂具有较高的活性和稳定性,在温和条件下的产率可达99%以上。结构和表面分析揭示了分散良好的铜种,它们的共同贡献促进了氢活化和底物转化。这种特性使贵金属催化剂成为一种具有成本效益和可持续性的替代品。该材料还显示出强大的可回收性,在重复使用中保持活性,并且放大测试证实了其实际可行性。这些结果突出了铜基系统在高效和工业相关加氢过程中的前景。
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引用次数: 0
Time-evolving photoreconfigurable self-assembly for integrated fluorochromic cellulosic emitter. 集成荧光纤维素发射器的时间演变光可重构自组装。
IF 6.2 2区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-29 DOI: 10.1038/s42004-025-01868-6
Fengfan Zhu, Xiao-Fang Hou, Hongyang Zhang, Juping Wang, Naixu Li, Bo Fu, Jiancheng Zhou, Xu-Man Chen

Light-driven dissipative self-assembly has garnered substantial attention due to its precise spatiotemporal controllability. However, achieving synergistic integration of spatial manipulation fidelity, architectural programmability, and dynamic reconfigurability within a free-standing platform remains a formidable challenge. Herein, we report a light-driven hierarchical dissipative self-assembly paradigm with temporally programmable fluorochromism, achieved through molecular-engineered coordination of dynamic macrocyclic host-guest interactions within sustainable cellulose matrices. Protonated vinylpyridium-derived merocyanine is designed and synthesized to construct light-controlled differential binding architectures with cucurbiturils. This system demonstrates quantitatively reversible interconversion between spiropyran and merocyanine states through alternating photoactivation (475 nm) and thermal relaxation. Structural modulation of host-guest stoichiometry between 1:2 and 1:1 induces nanoscale morphological switching between spherical and cuboid assemblies, accompanied by time-resolved fluorescence chromism. Leveraging the inherent affinity between cucurbiturils and cellulose nanofibrils, we engineered light-fueled hierarchical architectures into freestanding cellulosic papers, exhibiting self-erasing transient photowriting and multilevel anti-counterfeiting functions. The non-covalent host-guest architecture and reprocessable cellulose matrix synergistically enable material recyclability. This spatiotemporally programmed dissipative self-assembly system pioneers sustainable cellulose platforms for adaptive optoelectronics and smart sensing.

光驱动耗散自组装由于其精确的时空可控性而引起了广泛的关注。然而,在独立平台内实现空间操作保真度、建筑可编程性和动态可重构性的协同集成仍然是一个艰巨的挑战。在此,我们报告了一种具有时间可编程荧光性的光驱动分层耗散自组装范式,通过可持续纤维素基质内动态大环主客相互作用的分子工程协调实现。设计并合成了质子化乙烯基吡啶衍生的merocyanine,以构建与葫芦酚的光控差异结合结构。该体系通过交替光激活(475 nm)和热松弛,证明了螺吡喃和merocyanine状态之间定量可逆的相互转化。主客体化学计量在1:2和1:1之间的结构调制诱导了球形和长方体组件之间的纳米级形态切换,并伴有时间分辨荧光色度。利用葫芦醛和纤维素纳米原纤维之间的内在亲和力,我们设计了光燃料分层结构到独立的纤维素纸中,具有自擦瞬态照相和多级防伪功能。非共价主客体结构和可再处理的纤维素基质协同作用使材料可回收利用。这种时空程序化的耗散自组装系统开创了自适应光电子学和智能传感的可持续纤维素平台。
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引用次数: 0
Visualization-guided growth of CsPbBr3 microcrystals via water-induced phase transition. 水诱导相变CsPbBr3微晶的可视化生长。
IF 6.2 2区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-29 DOI: 10.1038/s42004-025-01840-4
Yichi Zhong, Qian Wang, Jian Huang, Chuanyu Zhang, Kun Qian, Zhanpeng Wang, Hongyu Yang, Jingzhou Li, Hongxing Dong, Long Zhang

This work presents a visual growth strategy based on water-induced phase transitions, which enables real-time tracking and structural regulation of Cs4PbBr6-to-CsPbBr3 microcrystal transformation under ambient conditions without the need for high-energy beams or vacuum. Driven by the difference in the dissolution rates of CsBr and PbBr2 in water, the slow progression of the reaction interface allows clear observation of crystal morphology evolution under a conventional fluorescence microscope. The microcrystals obtained through strategy possess highly regular structural morphology and superior optical properties. In the experiments, micron-scale-wire exhibiting size-dependent polarized emission and bulk-microcrystals supporting multimode lasing emission were successfully constructed. Further analysis revealed the significant influence of crystal size on excited-state dynamics, cavity mode selectivity, and emission characteristics, thereby establishing a direct link between structural visual regulation and functional photon output. This work delivers mechanistic insights and experimental evidence for controllable fabrication of low-threshold lasers and polarized light-emitting devices.

本工作提出了一种基于水诱导相变的可视化生长策略,该策略可以在环境条件下实时跟踪和调节cs4pbbr6到cspbbr3的微晶转变,而不需要高能光束或真空。由于CsBr和PbBr2在水中溶解速率的差异,反应界面的缓慢进展使得在常规荧光显微镜下可以清楚地观察到晶体形态的演变。该策略制备的微晶体具有高度规则的结构形态和优异的光学性能。在实验中,成功地构建了具有尺寸依赖性极化发射的微米尺度线和支持多模激光发射的块体微晶体。进一步分析表明,晶体尺寸对激发态动力学、腔模式选择性和发射特性有显著影响,从而在结构视觉调节和功能光子输出之间建立了直接联系。这项工作为低阈值激光器和偏振发光器件的可控制造提供了机理见解和实验证据。
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引用次数: 0
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