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EDITORIAL NOTES AND NEWS 社论和新闻
IF 2.6 Q2 Agricultural and Biological Sciences Pub Date : 2021-12-06 DOI: 10.1643/0045-8511(2001)001[1177:]2.0.co;2
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引用次数: 0
Volume Contents 卷的内容
IF 2.6 Q2 Agricultural and Biological Sciences Pub Date : 2020-12-31 DOI: 10.1643/CT2020129
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引用次数: 0
Taxonomic Index 分类指数
IF 2.6 Q2 Agricultural and Biological Sciences Pub Date : 2020-12-31 DOI: 10.1643/ot-10-175
A Abatia 135, 225, 230 Abies 156, 182, 213, 365 Acacia 211, 214, 365 Acaena 130 Acalypha 23 Acanthaceae 135, 452 Acanthothecis 72 Acer 111, 214 Adiantaceae 134 Adiantum 384 Agaricales 58–61, 454 Agaricus 61 Ageratina 214, 225, 312 Aiouea 135 Alchornea 30, 44, 135 Alfaroa 135, 312 Alloplectus 44 Alnus 18, 19, 55–61, 130, 135, 214, 185, 365–366, 397, 398 Alsophila 135 Amanita 62–64 Amblycercus 314 angiosperms 3 Anomoporia 60 Anthurium 42, 44, 134, 195, 312, 378–380, 452 Anzia 72 Apiaceae 135, 398 Aporocactus 111 Araceae 42, 135, 377–379, 452 Araliaceae 133, 378, 452 Arachniodes 44 Arbutus 185, 214, 217, 365 Ardisia 44, 135, 229, 312 Arenaria 130, 306 Arpophyllum 384 Arundinaria 127 Asplenium 42, 44, 45, 134, 378, 381, 384 Asplundia 135 Asteraceae 42, 134, 135, 146, 148, 226, 302, 378, 398, 452 Aulacorhynchus 315 Aulonemia 44, 127, 135
Abatia 135、225、230 Abies 156、182、213、365 Acacia 211、214、365 Acaena 130 Acalypha 23 Acanthaceae 135、452 Acanthothecis 72 Acer 111、214 Adianaceae 134 Adiantum 384 Agaricales 58–61、454 Agaricus 61 Ageratina 214、225、312 Aiouea 135 Alchorena 30、44、135 Alfaroa 135、312 Alloplectus 44 Alnus 18、19、55–61、130、135、214、185、365–366、397,398 Alsophila 135 Amanita 62–64 Amblycercus 314被子植物3 Anomoporia 60 Anthurium 42,44,134,195,312,378–380452 Anzia 72 Apiaceae 135,398 Aporoactus 111 Araceae 42,135,377–379452 Araliaceae 133,378452 Arachniodes 44 Arbutus 185,214,217,365 Ardisia 44,135,229,312 Arenaria 130,306 Arpophyllum 384 Arundinaria 127 Asplenium 42,44、45,134,378381,384阿斯普伦迪亚135菊科421341351461481822302378398452 Aulacorhynchus 315 Aulonemia 44127135
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引用次数: 0
New Species of Leaf-litter Toad of the Rhinella margaritifera Species Group (Anura: Bufonidae) from Amazonia 文章标题亚马孙河蟾蜍种群落叶蟾蜍新种(无尾目:蟾蜍科)
IF 2.6 Q2 Agricultural and Biological Sciences Pub Date : 2020-12-28 DOI: 10.1643/CH2020043
Miquéias Ferrão, A. Lima, S. Ron, Sueny Paloma Lima dos Santos, J. Hanken
We describe through integrative taxonomy a new Amazonian species of leaf-litter toad of the Rhinella margaritifera species group. The new species inhabits open lowland forest in southwest Amazonia in Brazil, Peru, and Bolivia. It is closely related to a Bolivian species tentatively identified as Rhinella cf. paraguayensis. Both the new species and R. paraguayensis share an uncommon breeding strategy among their Amazonian congeners: each breeds in moderate to large rivers instead of small streams or ponds formed by rainwater. The new species is easily differentiated from other members of the R. margaritifera species group by having a strongly developed bony protrusion at the angle of the jaw, a snout–vent length of 63.4–84.7 mm in females and 56.3–72.3 mm in males, well-developed supratympanic crests with the proximal portion shorter than the parotoid gland in lateral view, a divided distal subarticular tubercle on finger III, and multinoted calls composed of groups of 7–9 pulsed notes and a dominant frequency of 1,012–1,163 Hz. Recent studies have shown that the upper Madeira Basin harbors a megadiverse fauna of anurans, including several candidate species. This is the first member of the R. margaritifera species group to be described from this region in recent years, and at least two additional unnamed species await formal description.
我们通过综合分类描述了一种新的亚马逊河流域落叶蟾蜍种群。这种新物种生活在巴西、秘鲁和玻利维亚亚马逊河西南部的开阔低地森林中。它与玻利维亚的一种物种密切相关,暂定为巴拉圭犀牛。这两种新物种和巴拉圭瓢虫都有一种在亚马逊同族中不常见的繁殖策略:它们都在中大型河流中繁殖,而不是在雨水形成的小溪或池塘中繁殖。该新种具有明显的颚角骨突出,雌性鼻口长度为63.4-84.7 mm,雄性为56.3-72.3 mm,鼓室上嵴发育良好,近端比腮腺短,指III远端关节下结节分裂,与其他marmartifera物种组成员区分起来容易。以及由7-9个脉冲音符组成的多音符呼叫,主频为1,012-1,163 Hz。最近的研究表明,上马德拉盆地拥有多种多样的无尾动物,包括几个候选物种。这是近年来在该地区发现的第一个玛格里蒂fera物种群成员,至少还有两个未命名的物种等待正式描述。
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引用次数: 5
EDITORIAL NOTES AND NEWS 社论和新闻
IF 2.6 Q2 Agricultural and Biological Sciences Pub Date : 2020-12-28 DOI: 10.1643/ct2020114
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引用次数: 0
Systematics and Taxonomy of Chapalichthys (Cyprinodontiformes: Goodeidae), a Small Genus of Live-Bearers from Central Mexico 墨西哥中部一小属活生昆虫的系统与分类(鲤齿目:好足科)
IF 2.6 Q2 Agricultural and Biological Sciences Pub Date : 2020-12-28 DOI: 10.1643/CI2020044
K. Piller, D. Bloom, J. Lyons, N. Mercado-Silva
The genus Chapalichthys (Cyprinodontiformes: Goodeidae) consists of three allopatrically distributed species that occur on the Mesa Central, Mexico. Chapalichthys encaustus primarily occurs in the Río Lerma-Santiago basin, whereas both C. peraticus and C. pardalis have restricted distributions in the adjacent Río Balsas basin. Taxonomic issues in the genus center around the validity of C. peraticus. A formal systematic and taxonomic assessment of the genus inclusive of all three species of Chapalichthys has never been conducted. Therefore, the objectives of this study were two-fold: 1) to assess the phylogenetic relationships among multiple populations and all three species of Chapalichthys using 1,047 bp of mtDNA (ND2) sequence data, and 2) in light of the phylogenetic results, to re-examine the taxonomic status of C. peraticus using meristic and pigmentation characters. The phylogeny indicates two clades, each consisting of a valid species. One clade includes multiple populations of C. encaustus, and a second clade consists of multiple individuals of C. pardalis and C. peraticus. Chapalichthys pardalis and C. peraticus possess nearly identical mitochondrial sequences for ND2. Morphologically, meristic counts of all characters examined showed overlap for all three species and provide no species-specific diagnostic information. Chapalichthys encaustus can be differentiated from C. pardalis and C. peraticus based on the presence of vertical bars along the lateral flank versus a spotted pattern in the other two species. Chapalichthys pardalis and C. peraticus cannot be differentiated from one another based on pigmentation or meristics. The results from this study support the recognition of only two species of Chapalichthys: C. encaustus and C. pardalis.
Chapalichthys属(cyprinodontiforma: Goodeidae)由三个分布在墨西哥中部梅萨的异域物种组成。Chapalichthys encaustus主要分布在Río Lerma-Santiago盆地,而C. peraticus和C. pardalis在邻近的Río Balsas盆地均有有限分布。属的分类学问题主要围绕着佩尔蒂乌斯的有效性展开。从未对包括所有三个种在内的沙帕利鱼属进行过正式的系统和分类评估。因此,本研究的目的有两个:1)利用1047 bp的mtDNA (ND2)序列数据来评估Chapalichthys多居群和所有3种之间的系统发育关系;2)根据系统发育结果,利用分生和色素特征来重新审视peraticus的分类地位。系统发育表明两个支系,每个支系由一个有效的物种组成。其中一个进化支包括伊库斯库斯的多个种群,另一个进化支包括帕达利库斯和佩拉蒂库斯的多个个体。pardalis和C. peraticus具有几乎相同的线粒体ND2序列。形态学上,所有性状的分生计数显示三个物种都有重叠,没有提供物种特异性的诊断信息。Chapalichthys encaustus与C. pardalis和C. peraticus的区别在于它们的侧翼上有垂直的条纹,而其他两个物种的侧翼上有斑点。pardalis和C. peraticus不能根据色素沉着或特征加以区分。本研究结果仅支持Chapalichthys属的两个种:C. encaustus和C. pardalis。
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引用次数: 0
BOOK REVIEWS 书评
IF 2.6 Q2 Agricultural and Biological Sciences Pub Date : 2020-12-28 DOI: 10.1643/CT2020109
E. Quah
When David Burnett and I founded Molecular Pathology six years ago, it was partly in the belief (which I am sure is correct) that pathologists, whether they work in haematology, oncological pathology, microbiology, or whatever, speak the same language in molecular terms. The publication of this book underlines that fact, and although my interest is, of course, largely in lymphoma pathology, there are many chapters in this publication that are of interest to me, not only on the technical side. For example, those with an interest in Epstein-Barr virus would also benefit from reading the sections on papilloma virus, human herpesvirus 8, cytomegalovirus, and, of course, the detection of translocations and so on in various leukaemias and lymphomas. However, interest does not stop at this level because surely to most of us telomerases and microsatellite instability are of fundamental interest. Also, for example, in our hospital we have studies under way on molecular aspects of thrombotic disorders and haemochromotosis. These comments serve to underline, on a somewhat personalised basis, the broad overlap between what would appear to be highly specialised contributions in this volume. At the beginning of the book there are three essential chapters on DNA and RNA extraction from wax embedded or frozen tissue, which should be read by all in this field. Furthermore, with the increase in frequency of mycobacterial disease worldwide, the section on the detection and speciation of mycobacteria in formalin fixed, wax embedded tissue sections is surely a taste of the future when—for example, staining of sections with the ZiehiNeeisen technique will surely become a technique of the past. Thus, although on initial scan of the contents of this book, it would appear to be the case that any one individual might find, say, only three or four chapters of relevance or interest, I do not feel that this is the case and I would recommend any pathologist (with a capital P!) to dip into this book because they are sure to benefit from it.
当大卫·伯内特和我在六年前创立分子病理学时,部分原因是相信(我确信这是正确的)病理学家,无论他们从事血液学、肿瘤病理学、微生物学还是其他领域的工作,在分子术语上讲的都是同一种语言。这本书的出版强调了这个事实,虽然我的兴趣,当然,主要是在淋巴瘤病理,这本书中有很多章节是我感兴趣的,不仅仅是在技术方面。例如,对爱泼斯坦-巴尔病毒感兴趣的人也可以阅读有关乳头状瘤病毒,人类疱疹病毒8,巨细胞病毒,当然还有各种白血病和淋巴瘤的易位检测等章节。然而,人们的兴趣并不止于此,因为对我们大多数人来说,端粒酶和微卫星不稳定性无疑是根本的兴趣所在。此外,例如,在我们医院,我们正在进行血栓性疾病和血色素中毒的分子方面的研究。这些评论在个人的基础上强调了本卷中看似高度专业化的贡献之间的广泛重叠。在书的开头有三个重要的章节DNA和RNA提取从蜡埋或冷冻组织,这应该由所有在这个领域阅读。此外,随着世界范围内分枝杆菌疾病的频率增加,在福尔马林固定、蜡埋组织切片中检测分枝杆菌和形成分枝杆菌的切片肯定是未来的趋势,例如,用ZiehiNeeisen技术对切片进行染色肯定会成为过去的技术。因此,尽管在对本书内容的初步浏览中,似乎任何一个人都可能发现,比如说,只有三到四章相关或感兴趣,但我不觉得情况是这样的,我建议任何病理学家(大写P!)深入研究这本书,因为他们肯定会从中受益。
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引用次数: 0
Comprehensive Analysis of Salamander Hybridization Suggests a Consistent Relationship between Genetic Distance and Reproductive Isolation across Tetrapods 萨拉曼德杂交的综合分析表明,四足类之间的遗传距离与繁殖隔离具有一致的关系
IF 2.6 Q2 Agricultural and Biological Sciences Pub Date : 2020-12-28 DOI: 10.1643/CH-19-319
S. Melander, R. Mueller
Hybridization between populations along the path to complete reproductive isolation can provide snapshots of speciation in action. Here, we present a comprehensive list of salamander hybrids and estimate genetic distances between the parental hybridizing species using one mitochondrial and one nuclear gene (MT-CYB and RAG1). Salamanders are outliers among tetrapod vertebrates in having low metabolic rates and highly variable sex chromosomes. Both of these features might be expected to impact speciation; mismatches between the mitochondrial and nuclear genomes that encode the proteins for oxidative metabolism, as well as mismatches in heteromorphic sex chromosomes, can lead to reproductive isolation. We compared the genetic distances between hybridizing parental species across four main tetrapod groups that differ in metabolic rates and sex chromosome diversity: salamanders, lizards, mammals, and birds. Our results reveal no significant differences, suggesting that variation in these traits across vertebrates does not translate into predictable patterns of genetic divergence and incompatible loci in hybrids.
沿着完全生殖隔离的路径,种群之间的杂交可以提供行动中的物种形成的快照。在这里,我们提出了一个全面的蝾螈杂交种列表,并估计亲本杂交物种之间的遗传距离使用一个线粒体和一个核基因(MT-CYB和RAG1)。在四足脊椎动物中,蝾螈具有低代谢率和高度可变的性染色体。这两个特征都可能影响物种形成;编码氧化代谢蛋白质的线粒体基因组和核基因组之间的不匹配,以及异型性染色体的不匹配,都可能导致生殖隔离。我们比较了四个主要四足动物群体中不同代谢率和性染色体多样性的杂交亲本物种之间的遗传距离:蝾螈、蜥蜴、哺乳动物和鸟类。我们的研究结果没有显示出显著的差异,这表明这些性状在脊椎动物之间的差异并没有转化为可预测的遗传分化模式和杂交中不相容的位点。
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引用次数: 4
Morphology, Performance, and Ecology of Three Sympatric Turtles in a Tropical Dry Forest 热带干旱森林中三种同域龟的形态、性能和生态学
IF 2.6 Q2 Agricultural and Biological Sciences Pub Date : 2020-12-28 DOI: 10.1643/CE-18-165
Taggert G. Butterfield, M. Olson, Daniel D. Beck, R. Macip-Ríos
Resource partitioning in communities is often achieved by sympatric species having different morphologies that allow them to access different resources. This is because differences in morphology influence an organism's capability to perform a task that is relevant to their ecology. Here, we compare limb, shell, and head morphology, swimming performance, habitat use, and diet of three species (Rhinoclemmys rubida , R. pulcherrima, and Kinosternon chimalhuaca) that co-occur in the tropical dry forest of Chamela, Jalisco, Mexico. We found that these species do not overlap in both habitat or diet, and the overlap that we observed in habitat was contrasted by differences in diet. We also found a consistent relationship among limb and shell morphology, swimming speed, and habitat. Rhinoclemmys rubida occupies the driest deciduous forest atop and along hills, has shorter hands, less interdigital webbing, longer plastrons, more-domed shells, and slower swimming speeds in proportion to body size. In contrast, Kinosternon chimalhuaca exclusively occupies arroyos or seasonal streams, has longer hands, more interdigital webbing, smaller plastrons, less-domed shells, and faster swimming speeds in proportion to its body size. Rhinoclemmys pulcherrima was found in all habitats and intermediate in morphology and swimming speed between the other two species. Therefore, in this study system, limb and shell morphology are good indicators of habitat differences between turtle species. These differences are likely due to the influence that limb and shell morphology have on swimming performance. Relationships between head morphology and diet were less clear, which might be the result of changes in behavior or habitat rather than morphology. Patterns of resource partitioning in Chamela seem to coincide with other studies of turtle communities, which suggests that relationships among morphology, performance, and ecology that we observe here might be a general pattern across turtles.
群落中的资源分配通常是由具有不同形态的同域物种实现的,这使得它们能够获得不同的资源。这是因为形态上的差异会影响生物体执行与其生态相关的任务的能力。在这里,我们比较了三个物种(Rhinoclemmys rubida, R. pulcherrima和Kinosternon chimalhuaca)的肢体、壳和头部形态、游泳性能、栖息地利用和饮食,这些物种共同生活在墨西哥Jalisco州Chamela的热带干燥森林中。我们发现这些物种在栖息地和饮食上都没有重叠,我们在栖息地观察到的重叠与饮食的差异形成对比。我们还发现了肢壳形态、游泳速度和栖息地之间的一致关系。rubida Rhinoclemmys rubida生活在最干燥的落叶林中,栖息在山顶和山坡上,手较短,趾间蹼较少,蹼较长,壳较圆,与体型成比例的游动速度较慢。相比之下,奇诺斯特农金马华卡只栖息在河流或季节性溪流中,它们的手更长,蹼间更多,蹼更小,壳更少,与体型成比例的游动速度更快。pulcherrima在所有栖息地都有发现,在形态和游泳速度上介于其他两个物种之间。因此,在本研究系统中,肢和壳形态是反映龟种生境差异的良好指标。这些差异可能是由于肢和壳形态对游泳表现的影响。头部形态和饮食之间的关系不太清楚,这可能是行为或栖息地变化的结果,而不是形态的变化。Chamela的资源分配模式似乎与其他海龟群落的研究相吻合,这表明我们在这里观察到的形态、性能和生态之间的关系可能是海龟的一般模式。
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引用次数: 1
Molecular Phylogenetics of the Clingfishes (Teleostei: Gobiesocidae)—Implications for Classification Clinfish的分子系统发育学(Teleostei:Gobiesocidae)——分类意义
IF 2.6 Q2 Agricultural and Biological Sciences Pub Date : 2020-12-23 DOI: 10.1643/CI2020054
K. Conway, Cragen D. King, A. Summers, Daemin Kim, P. Hastings, G. Moore, S. Iglésias, M. Erdmann, C. Baldwin, G. Short, Kyoji Fujiwara, T. Trnski, G. Voelker, L. Rüber
Gobiesocidae are a moderate-sized family (currently 182 species, 51 genera) of predominantly coastal marine fishes, commonly referred to as clingfishes. Depending on the classification adopted, the species and genera of clingfishes are organized either across ten subfamilies, based on a classification scheme introduced in the 1950s (“traditional” classification, comprising Aspasminae, Cheilobranchinae, Chorisochisminae, Diademichthyinae, Diplocrepinae, Gobiesocinae, Haplocylicinae, Lepadogastrinae, Protogobiesocinae, and Trachelochisminae), or just two subfamilies, in a classification scheme adopted only recently (“reduced” classification, comprising Cheilobranchinae and Gobiesocinae). We investigated the phylogenetic relationships among members of the family Gobiesocidae using both mitochondrial and nuclear DNA sequence data to assess whether the alternative classification schemes (traditional and reduced) are compatible with inferred evolutionary relationships. Phylogenetic hypotheses are derived from maximum-likelihood and Bayesian analyses of a seven-gene concatenated dataset (2 mitochondrial and 5 nuclear markers; 4,857 bp) compiled from individuals representing 82 (of 182) species, 42 (of 51) genera, and 10 (of 10) subfamilies of the Gobiesocidae. Although our investigation provides strong support for the monophyly of the Gobiesocidae, multiple subfamilies of the traditional classification (Aspasminae, Diademichthyinae, Diplocrepinae, Gobiesocinae, and Trachelochisminae), one subfamily of the reduced classification (Gobiesocinae), and multiple genera (Aspasmichthys, Cochleoceps, Lepadogaster, and Lepadichthys) are resolved as non-monophyletic groups. Based on our results and the results of previous studies, we recommend a systematic reassignment of genera between subfamilies, of which we recognize nine: Cheilobranchinae, Chorisochisminae, Diademichthyinae, Diplocrepinae, Haplocylicinae, Gobiesocinae, Lepadogastrinae, Protogobiesocinae, and Trachelochisminae. Membership of the Lepadogastrinae is unchanged from previous usage; the Cheilobranchinae are expanded to contain additional genera from southern Australia, including those placed previously in the Aspasminae (Nettorhamphos and Posidonichthys) and the Diplocrepinae (Barryichthys, Cochleoceps, and Parvicrepis); the Aspasminae are placed in the synonymy of the Diademichthyinae and all genera placed in the former (excluding Modicus and Posidonichthys) are transferred to the latter; the Diplocrepinae are restricted to Diplocrepis; Eckloniaichthys scylliorhiniceps is transferred from the Gobiesocinae to the Chorisochisminae; Gobiesocinae are restricted to the New World members of this group (Acyrtops, Acyrtus, Arcos, Derilissus, Gobiesox, Rimicola, Sicyases, and Tomicodon); the Haplocylicinae are expanded to include additional genera from New Zealand (Gastrocyathus, Gastrocymba, and Gastroscyphus); the Protogobiesocinae are expanded to accommodate three genera of deep water taxa (Gymnoscyphus
Gobiesocidae是一个中等大小的科(目前182种,51属),主要是沿海海洋鱼类,通常被称为粘鱼。根据所采用的分类,抱鱼的种类和属可以分为10个亚科,这是基于20世纪50年代引入的分类方案(“传统”分类,包括Aspasminae, Cheilobranchinae, Chorisochisminae, Diademichthyinae, Diplocrepinae, Gobiesocinae, Haplocylicinae, Lepadogastrinae, Protogobiesocinae和Trachelochisminae),或者只有两个亚科,这是最近采用的分类方案(“简化”分类)。包括鳃鱼科和鳃鱼科)。我们使用线粒体和核DNA序列数据研究了Gobiesocidae家族成员之间的系统发育关系,以评估替代分类方案(传统和简化)是否与推断的进化关系兼容。系统发育假说来源于对7个基因串联数据集(2个线粒体和5个核标记;共4857 bp,共182种中的82种,51属中的42属,10亚科中的10亚科。虽然我们的研究为Gobiesocidae的单系性提供了强有力的支持,但传统分类的多个亚科(Aspasminae, Diademichthyinae, Diplocrepinae, Gobiesocinae和Trachelochisminae),简化分类的一个亚科(Gobiesocinae)和多个属(Aspasmichthys, Cochleoceps, Lepadogaster和Lepadichthys)被分解为非单系群。根据我们的研究结果和前人的研究结果,我们建议在亚科之间进行系统的属重新分配,我们确定了9个亚科:Cheilobranchinae, Chorisochisminae, Diademichthyinae, Diplocrepinae, Haplocylicinae, Gobiesocinae, Lepadogastrinae, Protogobiesocinae和Trachelochisminae。Lepadogastrinae的成员资格与以前的使用没有变化;Cheilobranchinae扩展到包括来自南澳大利亚的其他属,包括那些以前属于Aspasminae (Nettorhamphos和Posidonichthys)和Diplocrepinae (Barryichthys, Cochleoceps和Parvicrepis)的属;Aspasminae与Diademichthyinae是同义的,所有属于前者的属(不包括Modicus和Posidonichthys)都被转移到后者;双尾甲科仅限于双尾甲目;eckloniichthys scylliorhiniceps从Gobiesocinae转移到Chorisochisminae;Gobiesocinae仅限于该群的新世界成员(Acyrtops, Acyrtus, Arcos, Derilissus, Gobiesox, Rimicola, Sicyases和Tomicodon);Haplocylicinae扩展到包括来自新西兰的其他属(Gastrocyathus, Gastrocymba和Gastroscyphus);原gobiesocinae扩展到容纳三个深水分类群(Gymnoscyphus, Kopua和Protogobiesox);而Trachelochisminae仅限于Dellichthys和Trachelochismus。有4个归属不明的属(石绵螨属、孔螨属、Creocele属和Modicus属)没有归属于任何亚科,被认为是gobiesocides科中的intertae sesis。
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引用次数: 8
期刊
Copeia
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