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microRNA-based Genetic Therapy in Leukemia: Properties, Delivery, and Experimental Models. 基于微rna的白血病基因治疗:特性、传递和实验模型。
IF 3.6 4区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-01-01 DOI: 10.2174/1566523223666230426153622
Nayra Oliveira Prado, Denise Kusma Wosniaki, Anelis Maria Marin, Carolina Mathias, Heloisa Bruna Soligo Sanchuki, Dalila Luciola Zanette, Mateus Nóbrega Aoki

Leukemia is a type of cancer that affects white blood cells. In this disease, immature blood cells undergo genetic mutations, leading to excessive replication and reduced cell death compared to healthy cells. In cancer, there may be the activation of oncogenes and the deactivation of tumor suppressor genes that control certain cellular functions. Despite the undeniable contribution to the patient's recovery, conventional cancer treatments may have some not-so-beneficial effects. In this case, gene therapy appears as an alternative to classical treatments. Gene therapy delivers genetic material to cells to replace or modify dysfunctional genes, a safe method for neoplasms. One of the types of nucleic acids explored in gene therapy is microRNA (miRNA), a group of endogenous, non-proteincoding, small single-stranded RNA molecules involved in the regulation of gene expression, cell division, differentiation, angiogenesis, migration, apoptosis, and carcinogenesis. This review aims to bring together the most recent advances found in the literature on cancer gene therapy based on microRNAs in the oncological context, focusing on leukemia.

白血病是一种影响白细胞的癌症。在这种疾病中,未成熟的血细胞发生基因突变,导致与健康细胞相比过度复制和减少细胞死亡。在癌症中,可能存在致癌基因的激活和控制某些细胞功能的肿瘤抑制基因的失活。尽管对病人的康复有不可否认的贡献,但传统的癌症治疗可能有一些不那么有益的影响。在这种情况下,基因治疗似乎是传统治疗的替代方案。基因治疗将遗传物质传递到细胞中,以取代或修饰功能失调的基因,这是治疗肿瘤的一种安全方法。在基因治疗中探索的核酸类型之一是microRNA (miRNA),这是一组内源性、非蛋白质编码的小单链RNA分子,参与基因表达、细胞分裂、分化、血管生成、迁移、凋亡和癌变的调控。本综述旨在汇集基于microRNAs的肿瘤基因治疗的最新进展,重点是白血病。
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引用次数: 0
A Complete Sojourn of Gene Therapy along with its Targeting Approaches for the Treatment of the Major Depressive Disorder. 基因治疗及其靶向治疗重性抑郁障碍的完整历程
IF 3.6 4区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-01-01 DOI: 10.2174/1566523223666230601145632
Dilpreet Singh, G D Gupta

Approximately 2% to 3% of men and 6% to 7% of women suffer from severe depressive disorders. The existing drugs only partially relieve symptoms for roughly 40% of these patients. The majority of antidepressant drugs are based on theories that are now 50 to 60 years old, and the sector is in critical need of new drug development targets. In the recent decade, numerous genes have been connected to depression in animal models, and serious depression does run in families in humans, indicating both a genetic and environmental component. Depression has been linked to the malfunctioning of serotonin signaling genes, including p11, SERT, etc, according to earlier research. Gene therapy for depression has been found in some instances to be relatively safe, despite the fact that it may seem riskier and more invasive than medication. Hence, there is a growing field regarding the safest delivery mechanisms of these genes that treat major depressive disorders permanently. Hence, the present review summarized the delivery mechanisms of various genes responsible for depressive disorders along with their molecular mechanisms and delivery at the cellular level.

大约2%至3%的男性和6%至7%的女性患有严重的抑郁症。现有的药物只能部分缓解大约40%患者的症状。大多数抗抑郁药物都是基于50至60年前的理论,该行业迫切需要新的药物开发目标。近十年来,动物模型中的许多基因都与抑郁症有关,而且严重的抑郁症确实在人类的家族中存在,这表明遗传和环境因素都有影响。根据早期的研究,抑郁症与血清素信号基因的功能失调有关,包括p11、SERT等。研究发现,在某些情况下,基因治疗抑郁症是相对安全的,尽管它看起来比药物治疗更危险、更具侵入性。因此,关于永久治疗重度抑郁症的这些基因的最安全的传递机制,有一个不断发展的领域。因此,本文就抑郁症相关基因的传递机制及其分子机制和细胞水平的传递进行综述。
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引用次数: 0
Role of Dietary Phytochemicals in Targeting Human miRNAs for Cancer Prevention and Treatment. 膳食植物化学物质在靶向人类miRNA用于癌症预防和治疗中的作用。
IF 3.6 4区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-01-01 DOI: 10.2174/1566523223666230519124519
Yasodha Kesavan, Shushrruth Sai Srinivasan, Surajit Pathak, Satish Ramalingam

MicroRNAs (miRNAs - ~22 nucleotides) are a type of non-coding RNAs that are involved in post-transcriptional gene silencing. They are known to regulate gene expression in diverse biological processes, such as apoptosis, development, and differentiation. Several studies have demonstrated that cancer initiation and progression are highly regulated by miRNA expression. The nutrients present in the diet may regulate the different stages of carcinogenesis. Interestingly, plant-based foods, like fruits and vegetables, have been shown to play a significant role in cancer prevention. Phytochemicals are bioactive compounds derived from plant sources, and they have been shown to have antiinflammatory, antioxidant, and anticancer properties. Recent findings suggest that dietary phytochemicals, such as genistein, resveratrol, and curcumin, exert significant anticancer effects by regulating various miRNAs. In this review, we focus on the role of dietary phytochemicals in cancer prevention and treatment through the modulation of miRNA expression.

微小RNA(miRNAs-~22个核苷酸)是一种参与转录后基因沉默的非编码RNA。众所周知,它们在细胞凋亡、发育和分化等多种生物学过程中调节基因表达。几项研究表明,癌症的发生和发展受到miRNA表达的高度调节。饮食中存在的营养物质可能调节致癌作用的不同阶段。有趣的是,植物性食物,如水果和蔬菜,已被证明在预防癌症方面发挥着重要作用。植物化学物质是来源于植物的生物活性化合物,它们已被证明具有抗炎、抗氧化和抗癌特性。最近的研究结果表明,膳食中的植物化学物质,如染料木素、白藜芦醇和姜黄素,通过调节各种miRNA发挥显著的抗癌作用。在这篇综述中,我们重点关注饮食中的植物化学物质通过调节miRNA表达在癌症预防和治疗中的作用。
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引用次数: 0
Anesthesia and Cancer: Something More than Avoiding Stress Response. 麻醉和癌症:不仅仅是避免应激反应。
IF 3.6 4区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-01-01 DOI: 10.2174/1566523223666230328165109
Aida Raigon Ponferrada, Salvador Romero Molina, Juan Carlos Molina Ruiz, Josefa Gomez Maldonado, Jose Luis Guerrero Orriach

Currently, an increasing prevalence has been reported in incidences of tumor pathologies. The influence of anesthetics drugs has been the subject of numerous studies. It has been reported that the use of certain drugs may have an impact on prognosis and survival. By investigating the action of these drugs on different metabolic pathways and their mechanisms of action, we can better understand how they influence various hallmarks of carcinogenesis and determine their potential impact on cancer progression. Some of the action pathways are widely known within oncology, being targets of specific treatments, such as PI3k/AKT/mTOR, EGFR, and Wnt/ β-catenin. This review performs a thorough dissection of the interaction between anesthetic drugs and oncological cell lines through cell signaling pathways and genetic, immune, and transcriptomic pathways. Through these underlying mechanisms, it aims to clarify the effect of the choice of anesthetic drug and its potential influence on the prognosis of oncological surgery.

目前,肿瘤病理的发病率越来越高。麻醉药物的影响一直是许多研究的主题。据报道,某些药物的使用可能对预后和生存有影响。通过研究这些药物对不同代谢途径的作用及其作用机制,我们可以更好地了解它们如何影响各种致癌标志,并确定它们对癌症进展的潜在影响。一些作用途径在肿瘤学中广为人知,是特定治疗的靶点,如PI3k/AKT/mTOR, EGFR和Wnt/ β-catenin。本综述通过细胞信号通路、遗传、免疫和转录组学途径对麻醉药物与肿瘤细胞系之间的相互作用进行了全面的剖析。通过这些潜在的机制,旨在阐明麻醉药物选择的影响及其对肿瘤手术预后的潜在影响。
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引用次数: 0
TRPM8 as a Potential Biomarker and Therapeutic Target for Gastric Cancer Identified by a Combination of Text Mining and RNA Sequencing. 通过文本挖掘和RNA测序相结合鉴定TRPM8作为癌症的潜在生物标志物和治疗靶点。
IF 3.6 4区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-01-01 DOI: 10.2174/1566523223666230529142423
Na Kong, Wendong Li, Jun Zhang, Xin Wang, Lin Hu, Qiqi Xu

Introduction: Gastric cancer is a well-known malignant tumor that causes millions of deaths worldwide every year. Due to the lack of a specific biomarker for gastric cancer, most patients are diagnosed at an advanced stage of the disease which results in a poor prognosis and a higher death rate. Therefore, novel biomarkers are urgently needed for early diagnosis and to improve the survival rate.

Methods: In this study, we conducted RNA sequencing of tumor samples from 21 patients with gastric cancer. A total of 3192 differentially expressed genes (1589 up-regulated and 1603 down-regulated) were identified. Subsequently, we applied a text-mining algorithm for further analysis of these data and selected 30 representative genes to investigate as candidates for novel biomarkers in gastric cancer.

Results: Among these genes, we confirmed transient receptor potential melastatin 8 channels (TRPM8) as a novel biomarker based on Western blot and immunochemistry validation performed on 134 samples. Compared to normal gastric tissue, the tumor tissues exhibited a significantly higher expression level of TRPM8.

Conclusion: This study provides insights into the underlying role of TRPM8 in cell proliferation. In addition, TRPM8 may be used as a potential therapeutic target for patients with gastric cancer.

简介:癌症是一种众所周知的恶性肿瘤,每年导致全球数百万人死亡。由于缺乏癌症的特异性生物标志物,大多数患者被诊断为疾病晚期,这导致预后不良和死亡率较高。因此,迫切需要新的生物标志物来进行早期诊断和提高生存率。方法:对21例癌症患者肿瘤标本进行RNA测序。共鉴定出3192个差异表达基因(1589个上调,1603个下调)。随后,我们应用文本细化算法对这些数据进行进一步分析,并选择30个具有代表性的基因作为癌症新生物标志物的候选进行研究。结果:在这些基因中,基于对134个样本进行的Western印迹和免疫化学验证,我们确认了瞬时受体电位美他丁8通道(TRPM8)是一种新的生物标志物。与正常胃组织相比,肿瘤组织表现出显著更高的TRPM8表达水平。结论:本研究为TRPM8在细胞增殖中的潜在作用提供了见解。此外,TRPM8可作为癌症患者的潜在治疗靶点。
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引用次数: 0
Exosomal miRNAs as Next-generation Therapy Vehicles in Breast Cancer. 外体miRNA作为癌症下一代治疗载体。
IF 3.6 4区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-01-01 DOI: 10.2174/1566523223666230215103524
Priyanka Thakur, Harshita Dahiya, Ankur Kaushal, Vijai Kumar Gupta, Adesh K Saini, Reena V Saini

The second most pervasive cancer affecting the survival of women across the world is breast cancer. One of the biggest challenges in breast cancer treatment is the chemoresistance of cancer cells to various medications after some time. Therefore, highly specific blood-based biomarkers are required for early breast cancer diagnosis to overcome chemoresistance and improve patient survival. These days, exosomal miRNAs have attracted much attention as early diagnostic blood-based biomarkers because of their high stability, secretion from malignant tumor cells, and excellent specificity for different breast cancer subtypes. In addition, exosomal miRNAs regulate cell proliferation, invasion, metastasis, and apoptosis by binding to the 3'UTR of their target genes and limiting their production. This review focuses on the functions of exosomal miRNAs in tumorigenesis via targeting multiple signaling pathways as well as chemosensitivity and resistance mechanisms. In addition, the growing pieces of evidence discussed in this review suggest that circulating exosomal miRNAs could be utilized as potential next-generation therapeutic target vehicles in the treatment of breast cancer.

影响全世界妇女生存的第二大癌症是癌症。癌症治疗的最大挑战之一是癌症细胞在一段时间后对各种药物的化疗耐药性。因此,癌症早期诊断需要高度特异性的血液生物标志物,以克服化疗耐药性并提高患者生存率。近年来,外泌体miRNA作为早期诊断血液生物标志物,由于其高稳定性、从恶性肿瘤细胞分泌以及对不同的乳腺癌症亚型具有优异的特异性,引起了人们的广泛关注。此外,外泌体miRNA通过与靶基因的3'UTR结合并限制其产生来调节细胞增殖、侵袭、转移和凋亡。本文综述了外泌体miRNA通过靶向多种信号通路以及化疗敏感性和耐药性机制在肿瘤发生中的作用。此外,本综述中讨论的越来越多的证据表明,循环外泌体miRNA可作为潜在的下一代治疗靶向载体用于治疗癌症。
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引用次数: 2
MDAlmc: A Novel Low-rank Matrix Completion Model for MiRNADisease Association Prediction by Integrating Similarities among MiRNAs and Diseases. MDAlmc:一种新的低秩矩阵补全模型,通过整合mirna和疾病之间的相似性来预测mirna疾病关联。
IF 3.6 4区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-01-01 DOI: 10.2174/1566523223666230419101405
Kun Wang, Junlin Xu, Geng Tian, Yang Li, Xueying Zeng, Jialiang Yang

Introduction: The importance of microRNAs (miRNAs) has been emphasized by an increasing number of studies, and it is well-known that miRNA dysregulation is associated with a variety of complex diseases. Revealing the associations between miRNAs and diseases are essential to disease prevention, diagnosis, and treatment.

Methods: However, traditional experimental methods in validating the roles of miRNAs in diseases could be very expensive, labor-intensive and time-consuming. Thus, there is a growing interest in predicting miRNA-disease associations by computational methods. Though many computational methods are in this category, their prediction accuracy needs further improvement for downstream experimental validation. In this study, we proposed a novel model to predict miRNA-disease associations by low-rank matrix completion (MDAlmc) integrating miRNA functional similarity, disease semantic similarity, and known miRNA-disease associations. In the 5-fold cross-validation, MDAlmc achieved an average AUROC of 0.8709 and AUPRC of 0.4172, better than those of previous models.

Results: Among the case studies of three important human diseases, the top 50 predicted miRNAs of 96% (breast tumors), 98% (lung tumors), and 90% (ovarian tumors) have been confirmed by previous literatures. And the unconfirmed miRNAs were also validated to be potential disease-associated miRNAs.

Conclusion: MDAlmc is a valuable computational resource for miRNA-disease association prediction.

导读:越来越多的研究强调了microRNAs (miRNAs)的重要性,众所周知,miRNA失调与多种复杂疾病有关。揭示mirna与疾病之间的关联对于疾病的预防、诊断和治疗至关重要。方法:然而,验证mirna在疾病中的作用的传统实验方法可能非常昂贵,劳动密集型和耗时。因此,通过计算方法预测mirna -疾病关联的兴趣越来越大。虽然这类计算方法很多,但其预测精度有待进一步提高,有待下游实验验证。在这项研究中,我们提出了一种新的模型,通过低秩矩阵完成(MDAlmc)整合miRNA功能相似性、疾病语义相似性和已知的miRNA-疾病相关性来预测miRNA-疾病关联。在5重交叉验证中,MDAlmc的平均AUROC为0.8709,AUPRC为0.4172,优于以往的模型。结果:在人类三种重要疾病的病例研究中,96%(乳腺肿瘤)、98%(肺肿瘤)和90%(卵巢肿瘤)的前50个预测mirna已被既往文献证实。未经证实的mirna也被证实是潜在的疾病相关mirna。结论:MDAlmc是预测mirna与疾病关联的宝贵计算资源。
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引用次数: 0
Characteristics of BAY 2599023 in the Current Treatment Landscape of Hemophilia A Gene Therapy. BAY 2599023在当前血友病A基因治疗中的特点
IF 3.6 4区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-01-01 DOI: 10.2174/1566523222666220914105729
Steven W Pipe, Valder R Arruda, Claudia Lange, Stephen Kitchen, Hermann Eichler, Samuel Wadsworth

Hemophilia A, a single gene disorder leading to deficient Factor VIII (FVIII), is a suitable candidate for gene therapy. The aspiration is for single administration of a genetic therapy that would allow the production of endogenous FVIII sufficient to restore hemostasis and other biological processes. This would potentially result in reliable protection from bleeding and its associated physical and emotional impacts. Gene therapy offers the possibility of a clinically relevant improvement in disease phenotype and transformational improvement in quality of life, including an opportunity to engage in physical activities more confidently. Gene therapy products for hemophilia A in advanced clinical development use adeno-associated viral (AAV) vectors and a codon-optimized B-domain deleted FVIII transgene. However, the different AAV-based gene therapies have distinct design features, such as choice of vector capsid, enhancer and promoter regions, FVIII transgene sequence and manufacturing processes. These, in turn, impact patient eligibility, safety and efficacy. Ideally, gene therapy technology for hemophilia A should offer bleed protection, durable FVIII expression, broad eligibility and limited response variability between patients, and long-term safety. However, several limitations and challenges must be overcome. Here, we introduce the characteristics of the BAY 2599023 (AAVhu37.hFVIIIco, DTX 201) gene therapy product, including the low prevalence in the general population of anti-AAV-hu37 antibodies, as well as other gene therapy AAV products and approaches. We will examine how these can potentially meet the challenges of gene therapy, with the ultimate aim of improving the lives of patients with hemophilia A.

血友病A是一种导致因子VIII缺陷(FVIII)的单基因疾病,是基因治疗的合适候选者。单次给药是一种基因疗法,可以产生足够的内源性FVIII,以恢复止血和其他生物过程。这可能会产生可靠的保护,防止出血及其相关的身体和情感影响。基因治疗为疾病表型的临床相关改善和生活质量的转化性改善提供了可能性,包括更自信地参与体育活动的机会。用于血友病A的基因治疗产品处于临床晚期开发阶段,使用腺相关病毒(AAV)载体和密码子优化的b结构域缺失FVIII转基因。然而,不同的基于aav的基因疗法具有不同的设计特征,如载体衣壳、增强子和启动子区域、FVIII转基因序列和制造工艺的选择。这些反过来又影响患者的资格、安全性和有效性。理想情况下,血友病A的基因治疗技术应该提供出血保护、持久的FVIII表达、广泛的适格性和患者之间有限的反应差异以及长期的安全性。然而,必须克服一些限制和挑战。在这里,我们介绍BAY 2599023 (AAVhu37)的特性。hFVIIIco, DTX 201)基因治疗产品,包括抗AAV-hu37抗体在普通人群中的低患病率,以及其他基因治疗AAV产品和方法。我们将以改善A型血友病患者的生活为最终目标,研究这些基因如何应对基因治疗的挑战。
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引用次数: 0
Gene Therapy for Chronic Traumatic Brain Injury: Challenges in Resolving Long-term Consequences of Brain Damage. 慢性创伤性脑损伤的基因治疗:解决脑损伤长期后果的挑战。
IF 3.6 4区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-01-01 DOI: 10.2174/1566523221666211123101441
Vipin V Dhote, Prem Samundre, Aman B Upaganlawar, Aditya Ganeshpurkar

The gene therapy is alluring not only for CNS disorders but also for other pathological conditions. Gene therapy employs the insertion of a healthy gene into the identified genome to replace or replenish genes responsible for pathological disorder or damage due to trauma. The last decade has seen a drastic change in the understanding of vital aspects of gene therapy. Despite the complexity of traumatic brain injury (TBI), the advent of gene therapy in various neurodegenerative disorders has reinforced the ongoing efforts of alleviating TBI-related outcomes with gene therapy. The review highlights the genes modulated in response to TBI and evaluates their impact on the severity and duration of the injury. We have reviewed strategies that pinpointed the most relevant gene targets to restrict debilitating events of brain trauma and utilize vector of choice to deliver the gene of interest at the appropriate site. We have made an attempt to summarize the long-term neurobehavioral consequences of TBI due to numerous pathometabolic perturbations associated with a plethora of genes. Herein, we shed light on the basic pathological mechanisms of brain injury, genetic polymorphism in individuals susceptible to severe outcomes, modulation of gene expression due to TBI, and identification of genes for their possible use in gene therapy. The review also provides insights on the use of vectors and challenges in translations of this gene therapy to clinical practices.

基因疗法不仅对中枢神经系统疾病有吸引力,而且对其他病理疾病也有吸引力。基因治疗采用将健康基因插入已鉴定的基因组中,以取代或补充导致病理性疾病或创伤损伤的基因。在过去的十年里,人们对基因治疗的重要方面的理解发生了巨大的变化。尽管创伤性脑损伤(TBI)的复杂性,各种神经退行性疾病基因治疗的出现加强了正在进行的用基因治疗减轻TBI相关结果的努力。这篇综述强调了在脑外伤中调节的基因,并评估了它们对损伤的严重程度和持续时间的影响。我们回顾了确定最相关的基因靶点来限制脑外伤的衰弱事件的策略,并利用选择的载体在适当的位置传递感兴趣的基因。我们试图总结创伤性脑损伤的长期神经行为后果,这是由于与过多基因相关的许多病理代谢扰动。在此,我们阐明了脑损伤的基本病理机制,易感严重结果个体的遗传多态性,TBI导致的基因表达调节,以及基因治疗中可能使用的基因鉴定。这篇综述还提供了对载体的使用和将这种基因治疗转化为临床实践的挑战的见解。
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引用次数: 1
MicroRNA Theranostics in Cancer. 癌症的MicroRNA Theranos。
IF 3.6 4区 医学 Q2 GENETICS & HEREDITY Pub Date : 2023-01-01 DOI: 10.2174/156652322305230808102847
Sujay Paul
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引用次数: 0
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Current gene therapy
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