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Stay or stray: Lpar1 regulates neutrophil retention and epidermal homeostasis in early zebrafish development 停留或游离:Lpar1调节斑马鱼早期发育中的中性粒细胞滞留和表皮稳态。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2025-12-08 DOI: 10.1016/j.ydbio.2025.12.005
Shih-Chi Li , Yu-Chi Lin , Chung-Der Hsiao , Shyh-Jye Lee
Neutrophils play essential roles in host defense, but the mechanisms governing their developmental distribution remain poorly understood. Here, we identify a previously unrecognized function of lysophosphatidic acid receptor 1 (Lpar1) in maintaining neutrophil retention during early zebrafish development. Contrary to its previously described pro-inflammatory role, Lpar1 acts in an anti-inflammatory manner by preventing premature neutrophil dispersal. Mechanistically, Lpar1 regulates the expression of cxcl12a in the caudal hematopoietic tissue (CHT), establishing a novel Lpar1–Cxcl12a signaling axis that governs neutrophil localization. Lpar1 also influences neutrophil mobility through its effects on vascular integrity in the CHT, which is severely disrupted in Lpar1 morphants but may be mildly affected in Lpar1 mutants. Dispersed neutrophils are predominantly recruited to the superficial epidermal layer, where numerous apoptotic cells are present. Collectively, these findings refine current models of immune regulation during development and reveal an alternative mechanism that may contribute to the development of inflammatory skin disorders.
中性粒细胞在宿主防御中发挥着重要作用,但其发育分布的机制尚不清楚。在这里,我们发现了一种以前未被认识到的溶血磷脂酸受体1 (Lpar1)在维持斑马鱼早期发育过程中的中性粒细胞保留中的功能。与先前描述的促炎作用相反,Lpar1通过防止中性粒细胞过早分散而起到抗炎作用。从机制上讲,Lpar1调节尾侧造血组织(CHT)中cxcl12a的表达,建立了一个新的Lpar1- cxcl12a信号轴,控制中性粒细胞定位。Lpar1还通过其对CHT血管完整性的影响影响中性粒细胞的流动性,在Lpar1突变体中血管完整性受到严重破坏,但在Lpar1突变体中可能受到轻微影响。分散的中性粒细胞主要聚集到表皮浅层,那里存在大量凋亡细胞。总的来说,这些发现完善了目前发育过程中免疫调节的模型,并揭示了可能导致炎症性皮肤疾病发展的另一种机制。
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引用次数: 0
Epicardial Tcf21 facilitates cardiomyocyte dedifferentiation and heart regeneration in zebrafish 心外膜Tcf21促进斑马鱼心肌细胞去分化和心脏再生。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2025-12-06 DOI: 10.1016/j.ydbio.2025.12.004
Miglė Kalvaitytė-Repečkė , Sofija Gabrilavičiūtė , Kotryna Kvederavičiūtė , Leonard Burg , Edita Bakūnaitė , Kenneth D. Poss , Darius Balciunas
Unlike mammals, zebrafish (Danio rerio) are able to regenerate their hearts after injury, making them an excellent model organism for studying the molecular mechanisms underlying heart regeneration. Epicardium, the outermost layer of the heart, is an essential player in this process. Injury-induced epicardium activation, characterized by the expression of embryonic epicardial marker genes including tcf21, supports cardiac regeneration by providing various cell types and releasing paracrine signals that promote the restoration of damaged tissue. However, the molecular mechanisms involved in this process are insufficiently understood. In this study, we describe a conditional tcf21flox allele and use it to investigate the role of Tcf21 in heart regeneration. By employing 4-hydroxytamoxifen inducible CreERT2 recombinase, we eliminated tcf21 expression in adult fish. Our findings indicate that loss of this transcription factor reduces the presence of dedifferentiated cardiomyocytes in the injury area and impairs heart regeneration. This work provides new insights into the molecular basis of the epicardial response to heart injury and its role in guiding heart regeneration.
与哺乳动物不同,斑马鱼(Danio rerio)在受伤后能够再生心脏,这使它们成为研究心脏再生分子机制的绝佳模式生物。心外膜,心脏的最外层,在这个过程中起着至关重要的作用。以tcf21等胚胎心外膜标记基因的表达为特征的损伤诱导心外膜激活,通过提供各种细胞类型和释放促进受损组织修复的旁分泌信号来支持心脏再生。然而,参与这一过程的分子机制尚不清楚。在这项研究中,我们描述了一个条件tcf21flox等位基因,并利用它来研究Tcf21在心脏再生中的作用。利用4-羟他莫昔芬诱导的CreERT2重组酶,我们消除了tcf21在成鱼中的表达。我们的研究结果表明,这种转录因子的缺失减少了损伤区域中去分化心肌细胞的存在,并损害了心脏再生。这项工作为心外膜对心脏损伤反应的分子基础及其在指导心脏再生中的作用提供了新的见解。
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引用次数: 0
Genetic background influences the extent and severity of cilia-related congenital anomalies in Ift56/Ttc26 mutant mice 遗传背景影响Ift56/Ttc26突变小鼠纤毛相关先天性异常的程度和严重程度。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2025-12-05 DOI: 10.1016/j.ydbio.2025.12.003
Daisy Xin , Mycah Sewell , Elli Emmanouil , Scott D. Weatherbee
Multiple congenital anomalies have been linked to defects in the formation or function of a small cellular organelle called the cilium. The severity of cilia-related syndromes (ciliopathies) ranges from viable with fertility defects to embryonic lethal, often with different mutations in the same gene resulting in highly variable phenotypes. While some of the disparity is likely due to differential effects of specific mutations, genetic variants at other loci could serve as ciliopathy modifiers. This could lead to the same mutation causing distinct effects in different individuals. Here, we show that a loss-of-function mutation in Ift56, a key gene involved in cilia protein trafficking, has dramatic phenotypic differences depending on the genetic background in mice. It has previously been reported that in the Balb/cByJ background, Ift56hop homozygous mutants are viable as adults, males are sterile, and homozygotes move their hindlimbs in tandem, resulting in a hopping gait. In contrast, we demonstrate that in the C57BL/6J background, Ift56hop homozygotes are perinatal lethal, and have multiple skeletal and organ defects, including the formation of tracheoesophageal fistulas. Using Single Nucleotide Polymorphisms (SNPs) that differ between these mouse strains, we show that a modifier of the Ift56hop phenotype maps to Chromosome 4. Mutations in IFT56 and other cilia-related genes are being discovered in a growing number of human patients so understanding the mechanisms of their pathology is critical. Our study highlights the use of mouse models to identify ciliopathy modifier loci, with direct implications for human diagnostics.
多种先天性异常与一种叫做纤毛的小细胞器的形成或功能缺陷有关。纤毛相关综合征(纤毛病)的严重程度从具有生育缺陷的可存活性到胚胎致死性不等,通常在同一基因中具有不同的突变,导致表型高度可变。虽然某些差异可能是由于特定突变的不同影响,但其他位点的遗传变异可能作为纤毛病的修饰因子。这可能导致相同的突变对不同的个体产生不同的影响。在这里,我们发现Ift56(一个参与纤毛蛋白运输的关键基因)的功能缺失突变在小鼠中具有显著的表型差异,这取决于遗传背景。先前有报道称,在Balb/cByJ背景下,Ift56hop纯合突变体在成年后存活,雄性不育,纯合子移动后肢,导致跳跃步态。相反,我们证明在C57BL/6J背景下,Ift56hop纯合子是围产期致命的,并且具有多种骨骼和器官缺陷,包括气管食管瘘的形成。利用这些小鼠品系之间不同的单核苷酸多态性(snp),我们发现Ift56hop表型的修饰子映射到4号染色体。在越来越多的人类患者中发现了IFT56和其他纤毛相关基因的突变,因此了解其病理机制至关重要。我们的研究强调了使用小鼠模型来识别纤毛病修饰位点,这对人类诊断具有直接意义。
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引用次数: 0
PRDM paralogs are required for Meckel's cartilage formation during mandibular bone development 在下颌骨发育过程中,梅克尔软骨的形成需要PRDM类似物。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2025-12-04 DOI: 10.1016/j.ydbio.2025.12.002
Qootsvenma Denipah-Cook , Bryanna V. Saxton , Kristin B. Artinger , Lomeli C. Shull
Mandibular bone development depends on the formation of a cartilaginous anlage Meckel's cartilage derived from neural crest cells (NCC) and intramembranous ossification or direct differentiation of NCCs toward osteoblasts. Wnt/β-catenin signaling drives osteogenic vs chondrogenic differentiation and must be tightly controlled during the differentiation of osteochondroprogenitors. Chromatin remodelers add hierarchal regulation to the activation and repression of crucially timed gene regulatory networks and signaling cascades. In this study, we investigated the function of two chromatin remodelers—histone methyltransferases, PRDM3 and PRDM16 during murine craniofacial development. Conditionally ablating both Prdm3 and Prdm16 in the neural crest lineage using the Wnt1-Cre driver resulted in dramatic craniofacial phenotypes, including a severely hypoplastic mandible with complete absence of Meckel's cartilage at E18.5. Focusing on the Meckel's cartilage and mandibular bone phenotype, histological analysis demonstrated a significant increase in RUNX2+ osteoblast precursors, and loss of SOX9+ chondrogenic cells, suggesting an increase in osteoblast progenitors at the expense of chondrocytes that would otherwise form the Meckel's cartilage. This was not due to alterations in proliferation or apoptosis, as we observed no significant changes in the number of phosphoH3+ or cleaved caspase3+ cells in the mandibular process at E11.5, suggesting lack of NCC-derived chondrocytes is due to a change in NCC osteochondroprogenitor fate decisions. mRNA transcripts and protein abundance of Wnt/β-catenin signaling components were elevated in the mandibular process during initial NCC osteochondroprogenitor condensation events, suggesting PRDM3 and PRDM16 normally restrict expression of Wnt/β-catenin signaling components during NCC-derived osteochondroprogenitor differentiation to promote chondrogenesis and Meckel's cartilage formation. Taken together, PRDM3 and PRDM16 are required for NCC differentiation toward chondrocytes during Meckel's cartilage formation by controlling proper spatiotemporal Wnt/β-catenin transcriptional activity and this process is necessary for morphogenesis of the developing mandible.
下颌骨的发育依赖于神经嵴细胞(NCC)衍生的软骨基质梅克尔软骨的形成和膜内骨化或NCC向成骨细胞的直接分化。Wnt/β-catenin信号驱动成骨与软骨分化,在骨软骨祖细胞分化过程中必须受到严格控制。染色质重塑者为激活和抑制关键时间基因调控网络和信号级联增加了层次调节。在这项研究中,我们研究了两种染色质重塑酶-组蛋白甲基转移酶PRDM3和PRDM16在小鼠颅面发育中的功能。使用Wnt1-Cre驱动器有条件地消融神经嵴谱系中的Prdm3和Prdm16导致显著的颅面表型,包括E18.5时严重发育不良的下颌骨和完全缺失的Meckel软骨。关注Meckel软骨和下颌骨表型,组织学分析显示RUNX2+成骨细胞前体显著增加,SOX9+软骨细胞缺失,提示成骨细胞前体增加,以牺牲形成Meckel软骨的软骨细胞为代价。这不是由于增殖或凋亡的改变,因为我们观察到E11.5时下颌突中phosphoH3+或cleaved caspase3+细胞的数量没有显著变化,这表明缺乏NCC来源的软骨细胞是由于NCC骨软骨祖细胞命运决定的改变。在NCC初始骨软骨祖细胞凝聚过程中,下颌过程中Wnt/β-catenin信号组分的mRNA转录物和蛋白丰度升高,提示在NCC源性骨软骨祖细胞分化过程中,PRDM3和PRDM16通常限制Wnt/β-catenin信号组分的表达,以促进软骨形成和Meckel软骨形成。综上所述,PRDM3和PRDM16是Meckel软骨形成过程中NCC向软骨细胞分化所必需的,通过控制适当的时空Wnt/β-catenin转录活性,这一过程是发育中的下颌骨形态发生所必需的。
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引用次数: 0
Electroporation-based gene delivery and whole-organoid imaging in human retinal organoids 基于电穿孔的基因传递和人类视网膜类器官的全器官成像。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2025-12-04 DOI: 10.1016/j.ydbio.2025.11.016
Keevon Flohr , Michael Janeček , Lingyun Wang , Vicente Valle , Shaohua Pi , Rui T. Peixoto , Susana da Silva
Human retinal organoids (hRetOrg) derived from human induced pluripotent stem cells (hiPSCs) have emerged as powerful in vitro systems for studying retinal development, modeling retinal diseases, and evaluating therapeutic strategies. However, current genetic manipulation approaches, such as stable hiPSC line generation and viral transduction, are laborious and costly, offering limited spatial specificity and high variability in transgene expression. Here, we report a rapid, scalable, and spatially precise electroporation-based platform for efficient plasmid-based gene delivery in early-stage hRetOrg. Our method enables tunable and region-specific transfection of retinal progenitor cells without viral vectors or clonal selection. When coupled with resonant-scanning two-photon microscopy, this approach allows fast live cell imaging of whole organoids with subcellular resolution. Taken together, our versatile system supports high-throughput genetic manipulation and imaging in intact hRetOrg, advancing studies of human retinal development, gene function, and disease pathophysiology.
来源于人诱导多能干细胞(hiPSCs)的人类视网膜类器官(hregg)已成为研究视网膜发育、视网膜疾病建模和评估治疗策略的强大体外系统。然而,目前的基因操作方法,如稳定的hiPSC细胞系生成和病毒转导,是费力和昂贵的,在转基因表达中提供有限的空间特异性和高可变性。在这里,我们报告了一个快速、可扩展、空间精确的基于电穿孔的平台,用于早期hreg中高效的基于质粒的基因传递。我们的方法使视网膜祖细胞的可调和区域特异性转染无需病毒载体或克隆选择。当与共振扫描双光子显微镜相结合时,这种方法可以对整个类器官进行亚细胞分辨率的快速活细胞成像。综上所述,我们的多功能系统支持完整hreg的高通量遗传操作和成像,推进人类视网膜发育、基因功能和疾病病理生理学的研究。
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引用次数: 0
Challenges and opportunities for understanding the genetic causes of congenital anomalies 了解先天性异常遗传原因的挑战与机遇。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2025-12-01 DOI: 10.1016/j.ydbio.2025.12.001
Janina Kueper , Ivan Moskowitz , Rolf Stottmann , Irene Zohn , Mustafa K. Khokha
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引用次数: 0
Outside Back Cover - Graphical abstract TOC/TOC in double column/Cover image legend if applicable, Bar code, Abstracting and Indexing information 封底外-图形摘要TOC/双栏TOC/封面图例(如适用),条形码,摘要和索引信息
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2025-11-28 DOI: 10.1016/S0012-1606(25)00329-X
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引用次数: 0
Reprogramming our fate: a postdoctoral reflection on current challenges and prospects for developmental biology 重新规划我们的命运:对发育生物学当前挑战和前景的博士后反思。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2025-11-22 DOI: 10.1016/j.ydbio.2025.11.012
Ben Dillon Cox , Hailong Yang , Joshua Moore , Neha Ahuja , Kirk Amundson , Nicole Aponte-Santiago , Cagney Coomer , Yan Gong , Amy L. Herbert , Concepcion Manzano , Jesús Martínez-Gómez , James Satterlee , Siobhán M. Brady , Crystal D. Rogers
Developmental biology stands at a crossroads. While some have suggested the field is in decline, we, early-career developmental biologists, see an era of renewal driven by conceptual expansion, technical innovation, and cross-disciplinary integration. In this Commentary, we reflect on discussions from a 2024 workshop of postdoctoral scholars from across North America, outlining shared challenges and opportunities that will shape the field's future. We argue that the perceived crisis in developmental biology stems not from a lack of relevance, but from a narrow definition that overlooks its broader reach, from embryogenesis to regeneration, stem cell biology, aging, and environmental responsiveness. We highlight how emerging model organisms, single-cell systems, and advances in imaging and genomics now enable comparative and mechanistic insights across the tree of life. To sustain this progress, we call for renewed investment in basic research, structural reforms to support early-career scientists, and accessible community-driven resources for emerging model systems. Finally, we emphasize the importance of public engagement, equitable mentorship, and acknowledgment of the field's complex history to foster an inclusive and resilient scientific community. Together, these efforts can reprogram the trajectory of developmental biology and secure its central place in understanding the origins and dynamics of life.
发育生物学正站在一个十字路口。虽然有些人认为该领域正在衰落,但我们这些早期职业发展生物学家看到了一个由概念扩展、技术创新和跨学科整合驱动的更新时代。在这篇评论中,我们回顾了来自北美各地的博士后学者在2024年研讨会上的讨论,概述了将塑造该领域未来的共同挑战和机遇。我们认为,发育生物学的危机并非源于缺乏相关性,而是源于一个狭隘的定义,忽视了其更广泛的范围,从胚胎发生到再生,干细胞生物学,衰老和环境反应。我们强调新兴的模式生物,单细胞系统,以及成像和基因组学的进步,现在使整个生命之树的比较和机制见解成为可能。为了保持这一进展,我们呼吁重新对基础研究进行投资,进行结构改革以支持早期职业科学家,并为新兴模型系统提供可获得的社区驱动资源。最后,我们强调公众参与、公平指导和承认该领域复杂历史的重要性,以促进一个包容和有弹性的科学界。总之,这些努力可以重新编程发育生物学的轨迹,并确保其在理解生命起源和动力学方面的中心地位。
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引用次数: 0
Cranial neural crest shortage leads to extensive craniofacial anomalies in mice mutant for the NR2F1/2 nuclear receptors NR2F1/2核受体突变小鼠颅神经嵴缺失导致广泛颅面异常。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2025-11-21 DOI: 10.1016/j.ydbio.2025.11.011
David Paulding , Simon J.Y. Han , Jonathan Timmons , Michelle Caye , Alexa Riedel , Samantha A. Brugmann , Lindsey Barske
Nuclear receptors are iteratively deployed during neural crest development, from pre-induction through differentiation stages. NR2F1 and NR2F2 in particular have been proposed as broad regulators of early neural crest gene expression in mammals, but the timing, extent, and redundancy of their developmental requirement has remained unclear, as Nr2f1 and Nr2f2 single mouse mutants present only minimal craniofacial phenotypes. Here we report the dynamic expression patterns of Nr2f1 and Nr2f2 in the mouse cranial neural crest from specification through post-migratory stages. Combined conditional knockout of both Nr2f1 and Nr2f2 in the neural crest with Wnt1-Cre or Pax3Cre caused severe midfacial clefting, loss of the maxilla and palate, and hypoplasticity of all other facial skeletal elements except the distal mandible. These perinatal phenotypes were rooted in a major shortage of pharyngeal arch mesenchyme at mid-gestation. This in turn traced to a deficiency of migrating neural crest cells, first evident in the trailing part of the first arch migratory stream at embryonic day 8.75. RNAseq at a slightly earlier stage revealed downregulation of many migratory neural crest genes, including a possible direct target, the phospholipase Plcg2. These findings reveal a vital requirement for NR2F1/2 within the later-forming cranial neural crest.
在神经嵴发育过程中,从预诱导到分化阶段,核受体被反复部署。特别是NR2F1和NR2F2被认为是哺乳动物早期神经嵴基因表达的广泛调节因子,但其发育需求的时间、程度和冗余性仍不清楚,因为NR2F1和NR2F2单小鼠突变体仅呈现最小的颅面表型。在此,我们报道了Nr2f1和Nr2f2在小鼠颅神经嵴从规范到迁移后的动态表达模式。神经嵴Nr2f1和Nr2f2与Wnt1-Cre或Pax3Cre联合条件敲除会导致严重的面中裂、上颌骨和上颚的缺失,以及除下颌骨远端外所有其他面部骨骼元素的可塑性低下。这些围产期表型的根源是在妊娠中期咽弓间质的主要短缺。这反过来又追溯到迁移神经嵴细胞的缺乏,在胚胎期8.75日第一个拱迁移流的尾部首先明显。在稍早的阶段,RNAseq揭示了许多迁移神经嵴基因的下调,包括一个可能的直接靶点,磷脂酶Plcg2。这些发现揭示了NR2F1/2在后期形成的颅神经嵴中的重要需求。
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引用次数: 0
Optogenetic activation of primary sensory neurons induces metamorphosis in Ciona 光遗传激活初级感觉神经元诱导小鼠变形。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2025-11-20 DOI: 10.1016/j.ydbio.2025.11.014
Nozomu M. Totsuka, Kohji Hotta
Metamorphosis is a key event in development that is conserved in many marine organisms. Ciona intestinalis type A induces metamorphosis through the settlement of papillae onto the substrate. The papilla consists of collocytes (CCs), primary sensory neurons (PSNs), and axial columnar cells (ACCs), but it remains unclear whether PSNs alone can induce metamorphosis. Manipulating single neurons is crucial for elucidating the neural network system that drives metamorphosis. In this study, we developed an optogenetic system in which ChrimsonR, a red-shifted mutant of channelrhodopsin, was expressed exclusively in PSNs, enabling metamorphosis to be induced by light stimulation. A Ciona-optimized self-cleaving peptide, T2A, was used to co-express the Ca2+ indicator GCaMP6s, allowing us to monitor neural activity during light stimulation. Activation of PSNs alone induced a series of metamorphic events, including epidermal backward movement, mesenchymal cell extravasation, and tail regression. Furthermore, we confirmed that metamorphosis proceeded to the juvenile stage. Metamorphosis was induced even with intermittent light stimulation, and the total stimulation time required for its initiation was approximately 6 min. The optogenetic system developed in this study may significantly contribute to elucidating the link between neuronal function and metamorphosis at the single-cell level.
在许多海洋生物中,变态是发育过程中的一个关键事件。A型刺肠菌通过乳突在基质上的沉降诱导变态。乳头由胶质细胞(CCs)、初级感觉神经元(psn)和轴向柱状细胞(ACCs)组成,但目前尚不清楚psn是否能单独诱导变形。操纵单个神经元对于阐明驱动变态的神经网络系统至关重要。在这项研究中,我们开发了一个光遗传系统,在该系统中,通道视紫红质的红移突变体chrissonr仅在psn中表达,使光刺激能够诱导变态。一种经ciona优化的自切割肽T2A被用来共同表达Ca2+指示剂GCaMP6s,使我们能够监测光刺激下的神经活动。单独激活psn可诱导一系列变质事件,包括表皮向后运动、间充质细胞外溢和尾部后退。此外,我们证实了变态进入了幼年期。即使在间歇性光刺激下也能诱导变形,其启动所需的总刺激时间约为6分钟。本研究建立的光遗传系统可能有助于在单细胞水平上阐明神经元功能与变态之间的联系。
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引用次数: 0
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Developmental biology
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