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SWI/SNF ATPase Brahma and Notch signalling collaborate with CBP/p300 to regulate neural stem cell apoptosis in Drosophila larval central nervous system SWI/SNF ATPase Brahma和Notch信号与CBP/p300协同调控果蝇幼虫中枢神经系统神经干细胞凋亡
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2026-01-10 DOI: 10.1016/j.ydbio.2026.01.007
Punam Bala , Viswadica Prakki , Rohit Joshi
SWI-SNF ATPase Brahma and Notch signalling are known to interact during development, but how this interaction is executed at the molecular level is not fully understood. We have investigated the molecular mechanism of Brm-Notch interaction in the context of Hox-dependent neural stem cell (NSC) apoptosis in the developing Central Nervous System (CNS) of Drosophila. Our results suggest a multi-tier regulation of NSC apoptosis by Brahma, first by regulating the expression of Drosophila CBP/p300 (Nejire) and the molecular triggers of cell death (Hox, bHLH factor Grainyhead, and Notch signalling pathway). The second mode of regulation is by direct binding of Brahma to the apoptotic enhancer and its collaboration with Notch signalling pathway to regulate the RHG family of apoptotic genes, grim and reaper. Our data support a model where, upon activation of Notch signalling, Brahma and CSL-Su(H)/Mastermind complex recruit CBP/p300 onto the apoptotic enhancer. This increases the H3K27ac marks on the nucleosomes to open up the chromatin and facilitate apoptotic gene transcription in Abd-B and Grh dependent manner.
已知SWI-SNF atp酶Brahma和Notch信号在发育过程中相互作用,但这种相互作用如何在分子水平上执行尚不完全清楚。我们研究了发育中的果蝇中枢神经系统(CNS)中hox依赖性神经干细胞(NSC)凋亡过程中Brm-Notch相互作用的分子机制。我们的研究结果表明Brahma对NSC凋亡有多层调控,首先是通过调节果蝇CBP/p300 (Nejire)的表达和细胞死亡的分子触发器(Hox, bHLH因子Grainyhead和Notch信号通路)。第二种调节模式是Brahma直接结合凋亡增强子,并与Notch信号通路协同调节凋亡基因RHG家族,grim和reaper。我们的数据支持一个模型,即在Notch信号激活后,Brahma和CSL-Su(H)/Mastermind复合体将CBP/p300招募到凋亡增强子上。这增加了核小体上的H3K27ac标记,打开染色质,促进凋亡基因以Abd-B和Grh依赖的方式转录。
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引用次数: 0
Introducing DevBioConnect: A new author webinar series from developmental biology 发育生物学新作者网络研讨会系列。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2026-01-07 DOI: 10.1016/j.ydbio.2026.01.004
Manaswini Sarangi
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引用次数: 0
Primary cilia and BBS4 are required for postnatal pituitary development 初级纤毛和BBS4是出生后垂体发育所必需的
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2026-01-07 DOI: 10.1016/j.ydbio.2026.01.002
Kathryn M. Brewer , Katlyn K. Brewer , Nicholas C. Richardson , Jeremy F. Reiter , Nicolas F. Berbari , Mia J. Konjikusic
Primary cilia orchestrate several signaling pathways, and their disruption results in pleiotropic disorders called ciliopathies. Bardet-Beidl syndrome (BBS), one ciliopathy, provides insights into cilia function in many tissues. Using a mouse model of BBS, Bbs4 knockout (Bbs4−/−), we found that adult Bbs4−/− pituitaries are hypoplastic and have increased gonadotroph populations. Similarly, pituitary deletion of IFT88, required for ciliogenesis, attenuated growth and increased gonadotrophs. The developing Bbs4−/− pituitary experienced mildly reduced Hedgehog (HH) signaling. Isolated Bbs4−/− pituitary stem cells exhibited reduced HH signal responsiveness and expression of stem cell markers. These data demonstrate that cilia and BBS function are necessary for pituitary growth. We propose that altered cilia-mediated patterning of the pituitary contribute to physiological features of ciliopathies such as BBS.
初级纤毛协调几个信号通路,它们的破坏导致称为纤毛病的多效性疾病。Bardet-Beidl综合征(BBS),一种纤毛病,提供了许多组织纤毛功能的见解。在BBS小鼠模型中,我们发现Bbs4基因敲除(Bbs4−/−)后,成年Bbs4−/−垂体发育不全,且促性腺激素数量增加。同样,纤毛发生所需的垂体IFT88缺失,会减弱生长并增加促性腺激素。发育中的Bbs4−/−垂体经历了轻微的Hedgehog (HH)信号减少。分离的Bbs4−/−垂体干细胞表现出HH信号反应性降低和干细胞标记物的表达。这些数据表明纤毛和BBS功能是垂体生长所必需的。我们认为,改变的纤毛介导的模式的垂体有助于纤毛病的生理特征,如BBS。
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引用次数: 0
An inducible system to study the regulatory functions of GSX2 in human lateral ganglionic eminence-like progenitors 研究GSX2在人外侧神经节突样祖细胞中的调控功能的诱导系统。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2026-01-07 DOI: 10.1016/j.ydbio.2026.01.005
Edward Farrow , Smitha Rao , Simon J.Y. Han , Xuyao Chang , Cindy Huynh , Samantha A. Brugmann , Hee-Woong Lim , Jason Tchieu , Kenneth Campbell , Brian Gebelein
Animal models have demonstrated a critical role of the homeodomain transcription factor Genetic-Screened Homeobox 2 (‍‍‍‍‍‍‍‍‌‌‌‌‌‌Gsx‍‍2‍‍‍‍‍‍) in the developing basal ganglia. Moreover, recent clinical genetic studies have shown that GSX2 patient variants are associated with severe neurological symptoms and basal ganglia dysgenesis. Unfortunately, technical limitations with existing animal models, such as progenitor heterogeneity and limited temporal control, have impeded the investigation of direct regulatory targets. In this study, we engineered a Dox-inducible human embryonic stem cell (‍‍hESC) line to investigate the function of GSX2 in directed differentiation cultures that model developing lateral ganglionic eminence-like (LGE-like) progenitors. Transcriptomic, chromatin accessibility, and genomic binding studies revealed that GSX2: (1) binds both high- and low-accessibility chromatin using varying binding site preferences; (‌‌‌‌2) alters chromatin accessibility largely through indirect mechanisms; (3) functions primarily as a transcriptional repressor; and (4) regulates key conserved target genes that impact both neuronal progenitor maturation and regional specification. These results provide insight into the key regulatory roles and targets of GSX2, thereby establishing a new tractable experimental system to investigate basal ganglia development.
动物模型演示了一个关键的角色homeodomain转录因子Genetic-Screened同源框2 (‍‍‍‍‍‍‍‍‌‌‌‌‌‌ 2 Gsx‍‍‍‍‍‍‍‍)基底神经节中。此外,最近的临床遗传学研究表明,GSX2患者变异与严重的神经症状和基底神经节发育不良有关。不幸的是,现有动物模型的技术限制,如祖细胞异质性和有限的时间控制,阻碍了对直接调控目标的研究。在这项研究中,我们设计了一个dox诱导的人胚胎干细胞(‍‍hESC)系,以研究GSX2在定向分化培养中的功能,该培养模拟发育中的外侧神经节突状(LGE-like)祖细胞。转录组学、染色质可及性和基因组结合研究表明,GSX2:(1)通过不同的结合位点偏好结合高可及性和低可及性染色质;(2)主要通过间接机制改变染色质可及性;(3)主要作为转录抑制因子;(4)调控影响神经元祖细胞成熟和区域规范的关键保守靶基因。这些结果揭示了GSX2的关键调控作用和靶点,从而建立了一个新的可操作的实验系统来研究基底神经节的发育。
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引用次数: 0
IGF-1 regulates PEAR1 through Egr1 to promote skeletal muscle post-injury regeneration IGF-1通过Egr1调控PEAR1促进骨骼肌损伤后再生。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2026-01-06 DOI: 10.1016/j.ydbio.2026.01.003
Jinxia Wang , Yue Li , Yutong Zhang , Yu Zhao , Huili Tong , Shufeng Li
Insulin-like growth factor 1 (IGF-1) is a key regulator of skeletal muscle growth and regeneration. In this study, we demonstrate that IGF-1 promotes C2C12 myoblast proliferation in a dose- and time-dependent manner. Mechanistically, IGF-1 induces the expression of early growth response 1 (Egr1), a transcription factor that directly binds to the promoter region of platelet endothelial aggregation receptor 1 (PEAR1) and enhances its transcription. Upregulation of PEAR1 subsequently facilitates myoblast proliferation by activating the Notch signaling pathway. Furthermore, IGF-1-induced activation of the Egr1-PEAR1 cascade enhances muscle stem cell (MuSC) proliferation and accelerates skeletal muscle regeneration following injury in vivo. Collectively, this study reveals the critical role of the IGF-1-Egr1-PEAR1 regulatory axis in skeletal muscle regeneration, providing novel mechanistic insight into IGF-1-mediated muscle repair.
胰岛素样生长因子1 (IGF-1)是骨骼肌生长和再生的关键调节因子。在这项研究中,我们证明了IGF-1以剂量和时间依赖的方式促进C2C12成肌细胞的增殖。从机制上讲,IGF-1诱导早期生长反应1 (Egr1)的表达,Egr1是一种直接结合血小板内皮聚集受体1 (PEAR1)启动子区域并增强其转录的转录因子。PEAR1的上调随后通过激活Notch信号通路促进成肌细胞增殖。此外,igf -1诱导的Egr1-PEAR1级联的激活增强了肌肉干细胞(MuSC)的增殖,加速了体内损伤后骨骼肌的再生。总的来说,这项研究揭示了IGF-1-Egr1-PEAR1调节轴在骨骼肌再生中的关键作用,为igf -1介导的肌肉修复提供了新的机制见解。
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引用次数: 0
Outside Back Cover - Graphical abstract TOC/TOC in double column/Cover image legend if applicable, Bar code, Abstracting and Indexing information 封底外-图形摘要TOC/双栏TOC/封面图例(如适用),条形码,摘要和索引信息
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2026-01-03 DOI: 10.1016/S0012-1606(25)00359-8
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引用次数: 0
Gsx2 regulates oligodendrocyte precursor formation in the zebrafish spinal cord Gsx2调控斑马鱼脊髓少突胶质细胞前体形成。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2026-01-03 DOI: 10.1016/j.ydbio.2026.01.001
Kimberly A. Arena, Christina A. Kearns, Mohamoud Ahmed, Rebecca O'Rourke, Charles G. Sagerström, Santos J. Franco, Bruce Appel
Nervous system development relies on sequential and coordinated formation of diverse neurons and glia from neural progenitor cells (NPCs). In the spinal cord, NPCs of the pMN domain produce neurons early in development followed by oligodendrocyte precursor cells (OPCs), which subsequently differentiate as oligodendrocytes (OLs), the myelinating glia of the central nervous system. The mechanisms that specify neural progenitor cells to the OL lineage are not yet well understood. Using zebrafish as an experimental model system, we generated single-cell RNA sequencing and single-nuclei ATAC sequencing data that identified a subpopulation of NPCs, called pre-OPCs, that appeared fated to produce OPCs. pre-OPCs uniquely express several genes that encode transcription factors specific to the OL lineage, including Gsx2, which regulates OPC formation in the mouse forebrain. To investigate Gsx2 function in zebrafish OPC specification, we used CRISPR/Cas9 genome editing to create gsx2 loss-of-function alleles. gsx2 homozygous mutant embryos initiated OPC formation prematurely and produced excess OPCs without altering OL differentiation. Using our single-nuclei multi-omics dataset, we predicted a gene regulatory network centered around gsx2 and identified genes that might be transcriptionally regulated by Gsx2. Taken together, our studies suggest that Gsx2 expression in pre-OPCs contributes to the timing of OPC specification.
神经系统的发育依赖于神经祖细胞(neural progenitor cells, npc)中各种神经元和胶质细胞的顺序和协调形成。在脊髓中,pMN结构域的NPCs在发育早期产生神经元,随后产生少突胶质前体细胞(OPCs),后者随后分化为少突胶质细胞(OLs),即中枢神经系统的髓鞘胶质。将神经祖细胞指定为OL谱系的机制尚未得到很好的理解。使用斑马鱼作为实验模型系统,我们生成了单细胞RNA测序和单核ATAC测序数据,确定了一个被称为前OPCs的npc亚群,它们似乎注定要产生OPCs。pre-OPC独特地表达几种编码OL谱系特异性转录因子的基因,包括调节小鼠前脑OPC形成的Gsx2。为了研究Gsx2在斑马鱼OPC规范中的功能,我们使用CRISPR/Cas9基因组编辑技术创建了Gsx2功能缺失等位基因。gsx2纯合突变胚在不改变OL分化的情况下过早地启动OPC形成并产生过量的OPC。利用我们的单核多组学数据,我们预测了一个以gsx2为中心的基因调控网络,并鉴定了可能受gsx2转录调控的基因。综上所述,我们的研究表明,Gsx2在预OPC中的表达有助于OPC规范的时机。
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引用次数: 0
A morphometric characterization of early CHICK embryo elongation 早期鸡胚伸长的形态计量学特征。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2026-01-02 DOI: 10.1016/j.ydbio.2025.12.022
A.C. Maia-Fernandes , T. Pais de Azevedo , N. Borralho-Martins , S. Ramalhete , G.G. Martins , I. Palmeirim , I. Duarte , A. Marreiros , P.J. Martel , R.P. Andrade
The chicken embryo has long been a pivotal model system to understand the cellular and molecular mechanisms driving amniote embryo development. Its easy access for in vivo experimentation, together with the development of ex ovo culture techniques, has made it a choice model system for elaborate experimental manipulations. Temporal progression of chick embryo development is classically categorized using the Hamburger and Hamilton staging system (Hamburger, V., & Hamilton, 1951). However, this offers limited temporal resolution when comparing embryos within the same developmental stage and may further be hindered by experimental conditions that directly impact the morphological structures used for stage identification. Here, we performed time-lapse imaging of early chick embryonic stages HH4 to HH10 and obtained quantitative elongation data of multiple embryonic portions, yielding two valuable and freely accessible data resources for the chick research community. We identified length measurements capable of describing developmental time, thus enabling the alignment of independent embryos with temporal resolution. Notably, the head-fold (C-HF) showed a strong time correlation, even though it elongates above the primary embryonic axis. A morphometric characterization of HH stages further showed that C-HF length can discriminate HH stages of development, albeit with limited resolution. Finally, we present ChEEQ: Chicken Embryo Elongation Quantification (https://colab.research.google.com/github/EmbryoClock/ChickElong/blob/main/ChEEQ/ChEEQ.ipynb), a new morphometric tool describing HH4-HH10 embryo elongation, that allows the comparison of user-input data with our reference dataset and is capable of inferring quantitative alterations to embryo developmental time using length measurements alone. Together, these resources open new avenues for investigating vertebrate embryo elongation and quantitatively assessing the effects of experimental interventions on development.
鸡胚长期以来一直是了解羊膜胚发育的细胞和分子机制的关键模型系统。它易于在体内进行实验,再加上卵外培养技术的发展,使其成为精细实验操作的首选模型系统。鸡胚发育的时间进程通常使用Hamburger和Hamilton分期系统进行分类(Hamburger, V., & Hamilton, 1951)。然而,当比较处于同一发育阶段的胚胎时,这提供了有限的时间分辨率,并且可能进一步受到直接影响用于阶段识别的形态结构的实验条件的阻碍。本研究对早期鸡胚期HH4 ~ HH10进行延时成像,获得多个胚胎部分的定量伸长数据,为鸡研究界提供了两个有价值且可免费获取的数据资源。我们确定了能够描述发育时间的长度测量,从而使独立胚胎与时间分辨率对齐。值得注意的是,头部褶皱(C-HF)显示出很强的时间相关性,即使它在初级胚胎轴上拉长。HH阶段的形态计量学特征进一步表明,C-HF长度可以区分HH发育阶段,尽管分辨率有限。最后,我们提出了ChEEQ:鸡胚胎伸长量化(https://colab.research.google.com/github/EmbryoClock/ChickElong/blob/main/ChEEQ/ChEEQ.ipynb),这是一种描述HH4-HH10胚胎伸长的新形态测量工具,可以将用户输入的数据与我们的参考数据集进行比较,并且能够仅使用长度测量来推断胚胎发育时间的定量变化。总之,这些资源为研究脊椎动物胚胎伸长和定量评估实验干预对发育的影响开辟了新的途径。
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引用次数: 0
Bridges under construction: the dynamics of ring canal expansion during Drosophila oogenesis. 在建桥梁:果蝇卵发生过程中环管扩张的动态。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2025-12-31 DOI: 10.1016/j.ydbio.2025.12.021
Kari Price, Lindsay Lewellyn

Intercellular bridges connect cells within tissues and organs across the animal kingdom, where they play important roles in cell-cell communication and coordination. Some of the most well-studied intercellular bridges are the ring canals that connect germline cells within the developing Drosophila egg chamber. The genetic, imaging, and biochemical tools available within this model system have generated a wealth of information about the proteins, pathways, and structures that regulate ring canal formation, stability, and expansion. In this review, we describe the important contributions that have been made to our understanding of ring canal biology, with an emphasis on the mechanisms that promote ring canal expansion. We describe accessible and reliable tools available to study these structures as well as ways in which more modern genetic, imaging, biochemical, and bioinformatics-based approaches could be applied to the study of ring canals within the egg chamber or in other tissues or organisms.

细胞间桥连接动物王国中组织和器官内的细胞,在细胞间沟通和协调中起着重要作用。一些研究得最充分的细胞间桥是连接发育中的果蝇卵腔内的生殖系细胞的环管。该模型系统中可用的遗传、成像和生化工具已经产生了关于调节环管形成、稳定性和扩张的蛋白质、途径和结构的丰富信息。在这篇综述中,我们描述了对我们理解环管生物学的重要贡献,重点介绍了促进环管扩张的机制。我们描述了可用于研究这些结构的可访问和可靠的工具,以及更现代的遗传,成像,生化和基于生物信息学的方法可以应用于研究卵腔内或其他组织或生物体中的环管的方法。
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引用次数: 0
Nodal-directed endodermal cell changes are preceded by differential cell proliferation in the mesenchyme to break symmetry in the Leucoraja erinacea spiral intestine 结导向的内胚层细胞变化之前是间质细胞分化增殖,打破了白桦螺旋肠的对称性。
IF 2.1 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2025-12-25 DOI: 10.1016/j.ydbio.2025.12.016
Nicole A. Theodosiou, Anyerys Diaz
The left-right positioning of organs and subsequent formation of asymmetric organ shapes are vital for function and conserved in all vertebrates. Breaking symmetry is linked to Nodal-directed changes in endodermal cell behavior, but no evidence exists to date for differential cell proliferation in mesenchyme prior to asymmetry. Here we use the ancestral shape of the gut tube, the spiral valve intestine, as a model to study the evolution of how symmetry is broken. The spiral intestine is present in all basal fishes and is named after its shape; a short tube with an inner fold that rotates to create a spiral-shaped lumen. In the skate, Nodal signaling is necessary for initiating asymmetry by changes in cell behavior that lead to an expansion of the left endoderm wall. In contrast to previous studies, we also observe a significant increase in cell proliferation in left-sided mesenchymal cells prior to the break in symmetry. Thus, the skate spiral intestine is unique in combining evolutionary conserved mechanisms that change cell architecture with differential cell proliferation during initiation of gut organ morphogenesis.
器官的左右定位和随后形成的不对称器官形状对所有脊椎动物的功能和保守性至关重要。对称性的破坏与内胚层细胞行为的结节导向变化有关,但迄今为止尚无证据表明间质细胞增殖差异先于不对称性。在这里,我们使用肠管的祖先形状,螺旋阀肠,作为一个模型来研究对称性是如何被打破的。螺旋肠存在于所有基生鱼类中,并以其形状命名;螺旋管一种有内折的短管,可旋转形成螺旋形的管腔在滑冰,节点信号是必要的,以启动不对称的细胞行为的变化,导致左侧内胚层壁的扩张。与之前的研究相反,我们还观察到左侧间充质细胞在对称性断裂之前的细胞增殖显著增加。因此,溜冰螺旋肠是独特的结合进化保守机制,改变细胞结构和差异细胞增殖在肠道器官形态发生的起始。
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引用次数: 0
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Developmental biology
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