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The Tumor Suppressor Roles and Mechanisms of MiR-491 in Human Cancers. MiR-491在人类癌症中的抑瘤作用和机制
IF 3.1 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-09-01 Epub Date: 2022-08-01 DOI: 10.1089/dna.2022.0274
Farzad Sadri, Seyede Fatemeh Hosseini, Atena Aghayei, Mohammad Fereidouni, Zohreh Rezaei

MicroRNAs (miRNAs) are short non-coding RNAs that bind to the 3' untranslated region (3'' UTR) of target mRNAs to control gene expression post-transcriptionally. Recent indications have highlighted their important roles in a variety of pathophysiological conditions as well as human malignancies. Dysregulated miRNAs act as tumor suppressor genes or oncogenes in a variety of cancers. MiR-491 has been shown to have a major effect on tumorigenesis in multiple malignancies through binding to specific genes and signaling cascades, thereby preventing cancer progression. This review provides an overview of miR-491 expression in regulatory mechanisms and biological procedures of tumor cells, as well as the prospective possible treatment effects of various types of human cancers.

MicroRNAs (miRNAs)是一种短的非编码rna,它结合到靶mrna的3'非翻译区(3' UTR)上,在转录后控制基因表达。最近的适应症强调了它们在各种病理生理条件以及人类恶性肿瘤中的重要作用。失调的mirna在多种癌症中作为肿瘤抑制基因或致癌基因。MiR-491已被证明通过结合特定基因和信号级联反应对多种恶性肿瘤的肿瘤发生具有重要作用,从而阻止癌症进展。本文综述了miR-491在肿瘤细胞的调控机制和生物学过程中的表达,以及miR-491在各类人类癌症中的潜在治疗作用。
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引用次数: 2
4'-Fluorouridine Is a Broad-Spectrum Orally Available First-Line Antiviral That May Improve Pandemic Preparedness. 4′-氟吡啶是一种广谱口服一线抗病毒药物,可改善大流行防备。
IF 3.1 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-08-01 DOI: 10.1089/dna.2022.0312
Carolin M Lieber, Richard K Plemper

The COVID-19 pandemic has highlighted the urgent need for the development of broad-spectrum antivirals to enhance preparedness against future spillover of zoonotic viruses with pandemic potential into the human population. Currently, the direct-acting orally available SARS-CoV-2 inhibitors molnupiravir and paxlovid are approved for human use under emergency use authorization. A promising next-generation therapeutic candidate is the orally available ribonucleoside analog 4'-fluorouridine (4'-FlU) that had potent antiviral efficacy against different viral targets, including SARS-CoV-2 in human organoids and animal models. Although a nucleoside analog inhibitor such as molnupiravir that targets the viral RNA-dependent RNA polymerase (RdRP) complex, 4'-FlU showed a distinct mechanism of activity, delayed chain termination, compared with molnupiravir's induction of viral error catastrophe. This review will focus on some currently approved and emerging medicines developed against SARS-CoV-2, examining their potential to form a pharmacological first-line defense against zoonotic viruses with pandemic potential.

2019冠状病毒病大流行突出表明,迫切需要开发广谱抗病毒药物,以加强防范未来具有大流行潜力的人畜共患病毒向人群扩散。目前,直接口服的SARS-CoV-2抑制剂molnupiravir和paxlovid在紧急使用授权下被批准用于人用。有希望的下一代治疗候选药物是口服核糖核苷类似物4'-氟吡啶(4'-FlU),它对不同的病毒靶标具有强大的抗病毒功效,包括在人类类器官和动物模型中对SARS-CoV-2。尽管molnupiravir等核苷类似物抑制剂靶向病毒RNA依赖性RNA聚合酶(RdRP)复合物,但与molnupiravir诱导病毒错误突变相比,4'-FlU表现出独特的活性机制,即延迟链终止。本次审查将重点关注一些目前已批准的和正在开发的针对SARS-CoV-2的药物,研究它们形成具有大流行潜力的人畜共患病毒的药理学一线防御的潜力。
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引用次数: 2
JMJD3 Promotes Porphyromonas gingivalis Lipopolysaccharide-Induced Th17-Cell Differentiation by Modulating the STAT3-RORc Signaling Pathway. JMJD3通过调节STAT3-RORc信号通路促进牙龈卟啉单胞菌脂多糖诱导的th17细胞分化
IF 3.1 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-08-01 DOI: 10.1089/dna.2022.0149
Doudou Huang, Chi Zhang, Panpan Wang, Xiting Li, Li Gao, Chuanjiang Zhao

The immune response mediated by Th17 cells is essential in the pathogenesis of periodontitis. Emerging evidence has demonstrated that lipopolysaccharide from Porphyromonas gingivalis (Pg-LPS) could promote Th17-cell differentiation directly, while the downstream signaling remains elusive. This study was aimed to explore the role of JMJD3 (a JmjC family histone demethylase) and signal transducers and activators of transcription 3 (STAT3) in Th17-cell differentiation triggered by Pg-LPS and clarify the interaction between them. We found that the expression of JMJD3 and STAT3 was significantly increased under Th17-polarizing conditions. Pg-LPS could promote Th17-cell differentiation from CD4+ T cells, with an increased expression of JMJD3 and STAT3 compared to the culture without Pg-LPS. The coimmunoprecipitation results showed that the interactions of JMJD3 and STAT3, STAT3 and retinoid-related orphan nuclear receptor γt (RORγt) were enhanced following Pg-LPS stimulation during Th17-cell differentiation. Further blocking assays were performed and the results showed that inhibition of STAT3 or JMJD3 both suppressed the Th17-cell differentiation, JMJD3 inhibitor could reduce the expression of STAT3 and p-STAT3, while JMJD3 expression was not affected when STAT3 was inhibited. Taken together, this study found that JMJD3 could promote Pg-LPS induced Th17-cell differentiation by modulating the STAT3-RORc signaling pathway.

Th17细胞介导的免疫应答在牙周炎的发病过程中起重要作用。越来越多的证据表明,来自牙龈卟啉单胞菌的脂多糖(Pg-LPS)可以直接促进th17细胞的分化,但其下游信号通路尚不明确。本研究旨在探讨JMJD3 (JmjC家族组蛋白去甲基化酶)和信号转导及转录激活因子3 (STAT3)在Pg-LPS诱导的th17细胞分化中的作用,并阐明它们之间的相互作用。我们发现,在th17极化条件下,JMJD3和STAT3的表达显著增加。Pg-LPS可促进th17细胞从CD4+ T细胞分化,JMJD3和STAT3的表达较不加Pg-LPS的培养增加。共免疫沉淀结果显示,在th17细胞分化过程中,Pg-LPS刺激后,JMJD3与STAT3、STAT3与类视黄酮相关孤儿核受体γt (RORγt)的相互作用增强。进一步阻断实验结果显示,抑制STAT3或JMJD3均能抑制th17细胞的分化,JMJD3抑制剂可降低STAT3和p-STAT3的表达,而抑制STAT3不影响JMJD3的表达。综上所述,本研究发现JMJD3可以通过调节STAT3-RORc信号通路促进Pg-LPS诱导的th17细胞分化。
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引用次数: 1
FOXM1 Promotes Malignant Proliferation of Esophageal Squamous Cell Carcinoma Through Transcriptional Activating CDC6. FOXM1通过转录激活CDC6促进食管鳞状细胞癌恶性增殖。
IF 3.1 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-07-01 DOI: 10.1089/dna.2022.0169
Xiongfeng Chen, Jingbo Chen, Xunbin Yu, Guishan Lin, Ting Chen

Forkhead box M1 (FOXM1) is a proliferative transcription factor and plays a vital role in many cancers. However, the function and molecular mechanism of FOXM1 in esophageal squamous cell carcinoma (ESCC) remain poorly understood. Hence, we aim to clarify the molecular basis of FOXM1-mediated ESCC progression. In this study, bioinformatics analysis showed that FOXM1 was mainly involved in key signal pathways, including cell proliferation, cell cycle, and homologous recombination in ESCC, and predicted that CDC6 might be a potential regulatory target gene of FOXM1. The results revealed that FOXM1 and CDC6 were significantly overexpressed in ESCC tissue and cell line, and their expression was positively correlated. Further studies showed that FOXM1 directly transcriptionally activated CDC6 by binding to its promoter region in ESCC cells. Moreover, FOXM1 mediated ESCC cell proliferation by regulating CDC6 expression, which may be related to promoting G1-S phase transition of cell cycle. Taken together, FOXM1-CDC6 axis mediates ESCC malignant proliferation and may serve as a potential biological target for ESCC treatment.

叉头盒M1 (FOXM1)是一种增殖转录因子,在许多癌症中起着至关重要的作用。然而,FOXM1在食管鳞状细胞癌(ESCC)中的功能和分子机制尚不清楚。因此,我们旨在阐明foxm1介导的ESCC进展的分子基础。本研究通过生物信息学分析发现,FOXM1在ESCC中主要参与细胞增殖、细胞周期、同源重组等关键信号通路,并预测CDC6可能是FOXM1潜在的调控靶基因。结果显示,FOXM1和CDC6在ESCC组织和细胞系中显著过表达,且表达量呈正相关。进一步的研究表明,在ESCC细胞中,FOXM1通过结合CDC6的启动子区直接转录激活CDC6。此外,FOXM1通过调节CDC6表达介导ESCC细胞增殖,这可能与促进细胞周期G1-S期转变有关。综上所述,FOXM1-CDC6轴介导ESCC恶性增殖,可能是ESCC治疗的潜在生物学靶点。
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引用次数: 2
Noncoding RNA-Associated Competing Endogenous RNA Networks in Doxorubicin-Induced Cardiotoxicity. 非编码RNA相关的竞争内源性RNA网络在阿霉素诱导的心脏毒性。
IF 3.1 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-07-01 DOI: 10.1089/dna.2022.0022
Zijun Xiao, Shanshan Wei, Jie Huang, Jiaqin Liu, Jian Liu, Bikui Zhang, Wenqun Li

Accumulating evidence has indicated that noncoding RNAs (ncRNAs) are involved in doxorubicin-induced cardiotoxicity (DIC). However, the ncRNA-associated competing endogenous RNA (ceRNA)-mediated regulatory mechanisms in DIC remain unclear. In this study, we aimed to systematically investigate the alterations in expression levels of long noncoding RNA (lncRNA), circular RNA (circRNA), microRNA (miRNA), and mRNA in a DIC mouse model through deep RNA sequencing (RNA-seq). The results showed that 217 lncRNAs, 41 circRNAs, 11 miRNAs and 3633 mRNAs were aberrantly expressed. Moreover, the expression of 12 randomly selected transcripts was determined by real-time quantitative polymerase chain reaction to test the reliability of RNA-seq data. Based on the interaction between miRNAs and mRNAs, as well as lncRNAs/circRNAs and miRNAs, we constructed comprehensive lncRNA or circRNA-associated ceRNA networks in DIC mice. Moreover, we performed Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analyses for differentially expressed genes. In conclusion, these identified ceRNA interactions provide new insight into the underlying mechanism and may be crucial therapeutic targets of DIC.

越来越多的证据表明,非编码rna (ncRNAs)参与了阿霉素诱导的心脏毒性(DIC)。然而,DIC中ncrna相关的竞争内源性RNA (ceRNA)介导的调控机制尚不清楚。在这项研究中,我们旨在通过深度RNA测序(RNA-seq)系统地研究长链非编码RNA (lncRNA)、环状RNA (circRNA)、microRNA (miRNA)和mRNA在DIC小鼠模型中的表达水平变化。结果显示,217个lncrna、41个circrna、11个mirna和3633个mrna异常表达。此外,随机选择12个转录本,通过实时定量聚合酶链反应检测其表达,以检验RNA-seq数据的可靠性。基于mirna与mrna的相互作用,以及lncRNA / circrna与mirna的相互作用,我们在DIC小鼠中构建了完整的lncRNA或circrna相关的ceRNA网络。此外,我们对差异表达基因进行了基因本体和京都基因与基因组百科全书途径富集分析。总之,这些鉴定出的ceRNA相互作用为DIC的潜在机制提供了新的见解,可能是DIC的关键治疗靶点。
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引用次数: 2
Dihydroartemisinin Triggers Ferroptosis in Multidrug-Resistant Leukemia Cells. 双氢青蒿素触发多药耐药白血病细胞的脱铁作用。
IF 3.1 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-06-10 DOI: 10.1089/dna.2021.1145
Xueyan Zhang, Ziying Ai, Zhewen Zhang, Rui Dong, Lina Wang, Suya Jin, Hulai Wei
The molecular mechanisms and role of ferroptosis in tumor drug resistance remain unclear. In this study, we found that multidrug-resistant (MDR) K562/adriamycin (ADM) leukemia cells possessed higher glutathione (GSH) levels and iron-regulatory protein 2 (IRP2), transferrin receptor, ferritin heavy chain 1 (FTH1), and peroxidase-4 (GPX4) expression than parental drug-sensitive K562 leukemia cells. These elevations might have increased the antioxidant ability of K562/ADM cells and granted them increased buffering capacity against iron disorder, protecting them from ferroptosis and favoring drug resistance. However, dihydroartemisinin (DHA) restrained MDR K562/ADM cell viability and enhanced the sensitivity to ADM by strengthening ferroptosis induced by downregulation of GSH levels and GPX4, IRP2, and FTH expression, upregulation of reactive oxygen species (ROS) levels, and the consequent suppression of total serine/threonine kinase (AKT), total mammalian target of rapamycin (t-mTOR), phosphorylated mTOR (p-mTOR), and p-mTOR/t-mTOR levels. Moreover, compared with K562 cells, MDR K562/ADM cells exhibited greater ROS increases, GSH decreases, and viability rescue after ferroptosis inhibitor treatment owing to further suppression of FTH1, GPX4, p-mTOR, and p-mTOR/t-mTOR. Collectively, the increase in oxidative damage and the blockade of antioxidant defence shaped DHA-induced ferroptosis, which was responsible for the sensitivity of MDR leukemia cells to DHA. Regulating iron homeostasis/ROS/AKT/mTOR might be a potential chemotherapeutic strategy for sensitizing drug-resistant leukemia.
铁下垂在肿瘤耐药中的分子机制和作用尚不清楚。在本研究中,我们发现多药耐药(MDR) K562/阿霉素(ADM)白血病细胞的谷胱甘肽(GSH)水平和铁调节蛋白2 (IRP2)、转铁蛋白受体、铁蛋白重链1 (FTH1)和过氧化物酶4 (GPX4)的表达高于亲本药物敏感的K562白血病细胞。这些升高可能增加了K562/ADM细胞的抗氧化能力,并赋予它们对铁紊乱的缓冲能力,保护它们免受铁凋亡,并有利于耐药。然而,双氢青蒿素(DHA)抑制MDR K562/ADM细胞活力,增强对ADM的敏感性,其机制是通过下调GSH水平和GPX4、IRP2和FTH表达,上调活性氧(ROS)水平,进而抑制总丝氨酸/苏氨酸激酶(AKT)、雷帕霉素总靶蛋白(t-mTOR)、磷酸化mTOR (p-mTOR)和p-mTOR/t-mTOR水平而引起的铁死亡。此外,与K562细胞相比,MDR K562/ADM细胞由于FTH1、GPX4、p-mTOR和p-mTOR/t-mTOR的进一步抑制,在铁沉抑制剂处理后,表现出更大的ROS增加、GSH减少和活力恢复。总的来说,氧化损伤的增加和抗氧化防御的阻断形成了DHA诱导的铁凋亡,这是MDR白血病细胞对DHA敏感的原因。调节铁稳态/ROS/AKT/mTOR可能是使耐药白血病增敏的潜在化疗策略。
{"title":"Dihydroartemisinin Triggers Ferroptosis in Multidrug-Resistant Leukemia Cells.","authors":"Xueyan Zhang, Ziying Ai, Zhewen Zhang, Rui Dong, Lina Wang, Suya Jin, Hulai Wei","doi":"10.1089/dna.2021.1145","DOIUrl":"https://doi.org/10.1089/dna.2021.1145","url":null,"abstract":"The molecular mechanisms and role of ferroptosis in tumor drug resistance remain unclear. In this study, we found that multidrug-resistant (MDR) K562/adriamycin (ADM) leukemia cells possessed higher glutathione (GSH) levels and iron-regulatory protein 2 (IRP2), transferrin receptor, ferritin heavy chain 1 (FTH1), and peroxidase-4 (GPX4) expression than parental drug-sensitive K562 leukemia cells. These elevations might have increased the antioxidant ability of K562/ADM cells and granted them increased buffering capacity against iron disorder, protecting them from ferroptosis and favoring drug resistance. However, dihydroartemisinin (DHA) restrained MDR K562/ADM cell viability and enhanced the sensitivity to ADM by strengthening ferroptosis induced by downregulation of GSH levels and GPX4, IRP2, and FTH expression, upregulation of reactive oxygen species (ROS) levels, and the consequent suppression of total serine/threonine kinase (AKT), total mammalian target of rapamycin (t-mTOR), phosphorylated mTOR (p-mTOR), and p-mTOR/t-mTOR levels. Moreover, compared with K562 cells, MDR K562/ADM cells exhibited greater ROS increases, GSH decreases, and viability rescue after ferroptosis inhibitor treatment owing to further suppression of FTH1, GPX4, p-mTOR, and p-mTOR/t-mTOR. Collectively, the increase in oxidative damage and the blockade of antioxidant defence shaped DHA-induced ferroptosis, which was responsible for the sensitivity of MDR leukemia cells to DHA. Regulating iron homeostasis/ROS/AKT/mTOR might be a potential chemotherapeutic strategy for sensitizing drug-resistant leukemia.","PeriodicalId":11248,"journal":{"name":"DNA and cell biology","volume":" ","pages":""},"PeriodicalIF":3.1,"publicationDate":"2022-06-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"48071368","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 7
Deletion of Rheb1 in Osteocytes Leads to Osteopenia Characterized by Reduced Bone Formation and Enhanced Bone Resorption. 骨细胞中Rheb1的缺失导致骨质减少,其特征是骨形成减少和骨吸收增强。
IF 3.1 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-06-10 DOI: 10.1089/dna.2021.0874
Jun Yang, Wuju Zhang, Eryong Lai, Wen Liu, Pinglin Lai, Zhipeng Zou, Weidong Wang, X. Bai
Ras homologue enriched in brain 1 (Rheb1), an upstream activator of the mechanistic target of rapamycin complex 1 (mTORC1), is known to modulate various cellular processes. However, its impact on bone metabolism in vivo remains unknown. The study aimed at understanding the role of Rheb1 on bone homeostasis. We measured the serum parameters and performed histomorphometry, quantitative real-time polymerase chain reaction, and Western blotting, along with the generation of mouse gene knockout (KO) model, and conducted a microcomputed tomography analysis and tartrate-resistant acid phosphatase staining, to delineate the impacts of Rheb1 on bone homeostasis. In the Rheb1 KO mice, the results showed that Rheb1 KO caused significant damage to the bone microarchitecture, indicating that mTORC1 activity was essential for the regulation of bone homeostasis. Specifically, suppressed mineralization activity in primary osteoblasts and a decreased osteoblast number were observed in the Rheb1 KO mice, demonstrating that loss of Rheb1 led to impaired osteoblastic differentiation. Furthermore, the higher apoptotic ratio in Rheb1-null osteocytes could promote Tnfsf11 expression and lead to an increase in osteoclasts, indicating increased bone resorption activity in the KO mice. The findings confirmed that Rheb1 deletion in osteoblasts/osteocytes led to osteopenia due to impaired bone formation and enhanced bone resorption.
脑内富集的Ras同源物1(Rheb1)是雷帕霉素复合物1(mTORC1)机制靶标的上游激活剂,已知可调节各种细胞过程。然而,它对体内骨代谢的影响仍然未知。本研究旨在了解Rheb1在骨稳态中的作用。我们测量了血清参数,进行了组织形态计量学、定量实时聚合酶链式反应和蛋白质印迹,以及小鼠基因敲除(KO)模型的生成,并进行了微计算机断层扫描分析和酒石酸盐抗性酸性磷酸酶染色,以描述Rheb1对骨稳态的影响。在Rheb1-KO小鼠中,结果显示Rheb1-KO对骨微结构造成显著损伤,表明mTORC1活性对骨稳态的调节至关重要。具体而言,在Rheb1-KO小鼠中观察到原代成骨细胞的矿化活性受到抑制,成骨细胞数量减少,表明Rheb1的缺失导致成骨细胞分化受损。此外,Rheb1缺失骨细胞中较高的凋亡率可以促进Tnfsf11的表达,并导致破骨细胞的增加,表明KO小鼠的骨吸收活性增加。研究结果证实,由于骨形成受损和骨吸收增强,成骨细胞/骨细胞中Rheb1缺失导致骨质减少。
{"title":"Deletion of Rheb1 in Osteocytes Leads to Osteopenia Characterized by Reduced Bone Formation and Enhanced Bone Resorption.","authors":"Jun Yang, Wuju Zhang, Eryong Lai, Wen Liu, Pinglin Lai, Zhipeng Zou, Weidong Wang, X. Bai","doi":"10.1089/dna.2021.0874","DOIUrl":"https://doi.org/10.1089/dna.2021.0874","url":null,"abstract":"Ras homologue enriched in brain 1 (Rheb1), an upstream activator of the mechanistic target of rapamycin complex 1 (mTORC1), is known to modulate various cellular processes. However, its impact on bone metabolism in vivo remains unknown. The study aimed at understanding the role of Rheb1 on bone homeostasis. We measured the serum parameters and performed histomorphometry, quantitative real-time polymerase chain reaction, and Western blotting, along with the generation of mouse gene knockout (KO) model, and conducted a microcomputed tomography analysis and tartrate-resistant acid phosphatase staining, to delineate the impacts of Rheb1 on bone homeostasis. In the Rheb1 KO mice, the results showed that Rheb1 KO caused significant damage to the bone microarchitecture, indicating that mTORC1 activity was essential for the regulation of bone homeostasis. Specifically, suppressed mineralization activity in primary osteoblasts and a decreased osteoblast number were observed in the Rheb1 KO mice, demonstrating that loss of Rheb1 led to impaired osteoblastic differentiation. Furthermore, the higher apoptotic ratio in Rheb1-null osteocytes could promote Tnfsf11 expression and lead to an increase in osteoclasts, indicating increased bone resorption activity in the KO mice. The findings confirmed that Rheb1 deletion in osteoblasts/osteocytes led to osteopenia due to impaired bone formation and enhanced bone resorption.","PeriodicalId":11248,"journal":{"name":"DNA and cell biology","volume":" ","pages":""},"PeriodicalIF":3.1,"publicationDate":"2022-06-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49584036","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Characterization and Functional Analysis of ZmSWEET15a in Maize. 玉米ZmSWEET15a基因的鉴定与功能分析
IF 3.1 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-06-01 DOI: 10.1089/dna.2021.1144
Mengtong Liu, Tongyu Liu, Jianyu Lu, Yangyang Zhou, Shubo Liu, Peng Jiao, Siyan Liu, Jing Qu, Shuyan Guan, Yiyong Ma

The sugars will eventually be exported transporters (SWEETs) gene family is a new type of sugar transporters, which plays an important role in plant growth and development, physiological metabolism, and abiotic stress. In this study, we used quantitative real-time PCR to analyze the expression of ZmSWEET15a gene in different organs of maize and under different abiotic stresses. The results showed that ZmSWEET15a was expressed in roots, stems, leaves, and grains, with the highest expression level in leaves, which was highly correlated with leaf development. Under the treatment of polyethylene glycol (PEG), NaCl, H2O2, and abscisic acid stress, the expression of ZmSWEET15a was upregulated, while under the treatment of cold stress, the expression of ZmSWEET15a was inhibited. In sugar-specific experiments, we found that sucrose was the most effective carbon source for maize seed germination. The expression analysis of ZmSWEET15a in different carbon sources suggested that the expression of ZmSWEET15a was more likely to be induced by sucrose. Overexpression of ZmSWEET15a in maize plants could reduce the sucrose content in leaves and increase the sucrose content in grains. The heterologous expression of ZmSWEET15a in the yeast mutant strain SUSY7/ura indicated that ZmSWEET15a is a sucrose transporter and pH independent. This study provides new insight into sugar transport and carbohydrate partitioning in maize and other crops, and provide more genetic information for improving crop quality at the molecular level.

糖最终输出转运蛋白(SWEETs)基因家族是一类新型糖转运蛋白,在植物生长发育、生理代谢和非生物胁迫等方面起着重要作用。本研究采用实时荧光定量PCR技术分析了ZmSWEET15a基因在玉米不同器官和不同非生物胁迫下的表达情况。结果表明,ZmSWEET15a在根、茎、叶和籽粒中均有表达,其中在叶片中的表达量最高,与叶片发育高度相关。在聚乙二醇(PEG)、NaCl、H2O2和脱落酸胁迫下,ZmSWEET15a的表达上调,而在冷胁迫下,ZmSWEET15a的表达受到抑制。在糖特异性实验中,我们发现蔗糖是玉米种子萌发最有效的碳源。ZmSWEET15a在不同碳源中的表达分析表明,ZmSWEET15a的表达更容易受到蔗糖的诱导。ZmSWEET15a在玉米植株中过表达可降低叶片中蔗糖含量,提高籽粒中蔗糖含量。ZmSWEET15a在酵母突变株SUSY7/ura中的异源表达表明,ZmSWEET15a是一种蔗糖转运蛋白,与pH无关。该研究为玉米和其他作物的糖转运和碳水化合物分配提供了新的认识,并为在分子水平上提高作物品质提供了更多的遗传信息。
{"title":"Characterization and Functional Analysis of <i>ZmSWEET15a</i> in Maize.","authors":"Mengtong Liu,&nbsp;Tongyu Liu,&nbsp;Jianyu Lu,&nbsp;Yangyang Zhou,&nbsp;Shubo Liu,&nbsp;Peng Jiao,&nbsp;Siyan Liu,&nbsp;Jing Qu,&nbsp;Shuyan Guan,&nbsp;Yiyong Ma","doi":"10.1089/dna.2021.1144","DOIUrl":"https://doi.org/10.1089/dna.2021.1144","url":null,"abstract":"<p><p>The sugars will eventually be exported transporters (SWEETs) gene family is a new type of sugar transporters, which plays an important role in plant growth and development, physiological metabolism, and abiotic stress. In this study, we used quantitative real-time PCR to analyze the expression of <i>ZmSWEET15a</i> gene in different organs of maize and under different abiotic stresses. The results showed that <i>ZmSWEET15a</i> was expressed in roots, stems, leaves, and grains, with the highest expression level in leaves, which was highly correlated with leaf development. Under the treatment of polyethylene glycol (PEG), NaCl, H<sub>2</sub>O<sub>2</sub>, and abscisic acid stress, the expression of <i>ZmSWEET15a</i> was upregulated, while under the treatment of cold stress, the expression of <i>ZmSWEET15a</i> was inhibited. In sugar-specific experiments, we found that sucrose was the most effective carbon source for maize seed germination. The expression analysis of <i>ZmSWEET15a</i> in different carbon sources suggested that the expression of <i>ZmSWEET15a</i> was more likely to be induced by sucrose. Overexpression of <i>ZmSWEET15a</i> in maize plants could reduce the sucrose content in leaves and increase the sucrose content in grains. The heterologous expression of <i>ZmSWEET15a</i> in the yeast mutant strain SUSY7/ura indicated that <i>ZmSWEET15a</i> is a sucrose transporter and pH independent. This study provides new insight into sugar transport and carbohydrate partitioning in maize and other crops, and provide more genetic information for improving crop quality at the molecular level.</p>","PeriodicalId":11248,"journal":{"name":"DNA and cell biology","volume":"41 6","pages":"564-574"},"PeriodicalIF":3.1,"publicationDate":"2022-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9245729/pdf/dna.2021.1144.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9560349","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
Potential of MicroRNAs As Biomarkers and Therapeutic Targets in Respiratory Viruses: A Literature Review. 微小RNA在呼吸道病毒中作为生物标志物和治疗靶点的潜力:文献综述。
IF 3.1 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-06-01 DOI: 10.1089/dna.2021.1101
Omid Kooshkaki, A. Asghari, R. Mahdavi, Ghodsiyeh Azarkar, N. Parsamanesh
MicroRNAs (miRNAs) are small noncoding RNAs that regulate gene expression through recognition of cognate sequences and interference of transcriptional, translational, or epigenetic processes. Hundreds of miRNA genes have been found in diverse viruses, and many of these are phylogenetically conserved. Respiratory viruses are the most frequent causative agents of disease in humans, with a significant impact on morbidity and mortality worldwide. Recently, the role of miRNAs in respiratory viral gene regulation, as well as host gene regulation during disease progression, has become a field of interest. This review highlighted the importance of various miRNAs and their potential role in fighting with respiratory viruses as therapeutic molecules with a focus on COVID-19.
MicroRNAs (miRNAs)是一种小的非编码rna,通过识别同源序列和干扰转录、翻译或表观遗传过程来调节基因表达。在不同的病毒中发现了数百种miRNA基因,其中许多在系统发育上是保守的。呼吸道病毒是人类最常见的致病因子,对全世界的发病率和死亡率有重大影响。近年来,mirna在呼吸道病毒基因调控以及疾病进展过程中宿主基因调控中的作用已成为人们关注的领域。这篇综述强调了各种mirna的重要性及其作为治疗分子在对抗呼吸道病毒中的潜在作用,重点是COVID-19。
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引用次数: 2
Identification of Genes with Altered Methylation in Osteoclast Differentiation and Its Roles in Osteoporosis. 破骨细胞分化中甲基化改变基因的鉴定及其在骨质疏松症中的作用。
IF 3.1 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-06-01 DOI: 10.1089/dna.2021.0699
Renpeng Peng, Yimin Dong, Honglei Kang, Qian Guo, Meipeng Zhu, Feng Li
Osteoporosis is one of the most common metabolic skeletal diseases, which affects more than 200 million people worldwide, especially elderly and postmenopausal women. One of the main processes of osteoporosis is attenuated bone formation. Abundant evidence has confirmed that overactivated osteoclasts are responsible for the attenuated bone formation. This study aims at identifying novel methylation-associated biomarkers and therapeutic targets in osteoclasts by integrally analyzing methylation profiles and gene expression data. DNA methylation profile and gene expression data were obtained from the Gene Expression Omnibus (GEO) database. Subsequently, we integrated the two sets of data to screen for differentially expressed genes with differential methylation level (DM-DEGs) between osteoclasts and CD14+ monocytes from donors. Then, Gene Ontology (GO) analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis were performed to uncover the enriched functions and pathways of identified DM-DEGs. In addition, by combining protein-protein interaction analysis and receiver-operator characteristic analysis, we finally identified four hub DM-DEGs. Gene Set Enrichment Analysis was utilized to validate and investigate the potential biological functions of the four hub DM-DEGs. Finally, Real-time quantitative PCR (QPCR) was performed to validate the mRNA expression level of the four identified hub DM-DEGs during osteoclast differentiation. CCRL2, CCL18, C1QB, and SELL were highly correlated with osteoclastic differentiation and osteoporosis phenotype. QPCR revealed that the expression of CCRL2, CCL18, and C1QB was increased during osteoclast differentiation, whereas the expression of SELL was decreased. The present study indicated a connection between gene expression and DNA methylation during osteoclast differentiation and that four hub DM-DEGs in osteoclastogenesis and osteoporosis pathogenesis might be potential candidates for intensive research and therapeutic targets for the treatment of osteoporosis.
骨质疏松症是最常见的代谢性骨骼疾病之一,影响着全球2亿多人,尤其是老年人和绝经后妇女。骨质疏松症的主要过程之一是骨形成减弱。大量证据证实,过度活化的破骨细胞是骨形成减弱的原因。本研究旨在通过综合分析甲基化谱和基因表达数据,确定破骨细胞中新的甲基化相关生物标志物和治疗靶点。DNA甲基化图谱和基因表达数据来自基因表达综合数据库(GEO)。随后,我们整合了两组数据,以筛选来自供体的破骨细胞和CD14+单核细胞之间具有差异甲基化水平(DM-DEG)的差异表达基因。然后,进行基因本体论(GO)分析和京都基因和基因组百科全书(KEGG)通路分析,以揭示已鉴定的DM DEG的丰富功能和通路。此外,通过结合蛋白质-蛋白质相互作用分析和受体操作员特征分析,我们最终确定了四个中枢DM DEG。利用基因集富集分析来验证和研究四个中枢DM DEG的潜在生物学功能。最后,进行实时定量PCR(QPCR)以验证破骨细胞分化过程中四种已鉴定的中枢DM DEG的mRNA表达水平。CCRL2、CCL18、C1QB和SELL与破骨细胞分化和骨质疏松表型高度相关。QPCR显示,在破骨细胞分化过程中,CCRL2、CCL18和C1QB的表达增加,而SELL的表达减少。本研究表明,在破骨细胞分化过程中,基因表达和DNA甲基化之间存在联系,破骨细胞生成和骨质疏松症发病机制中的四个中枢DM-DEG可能是深入研究和治疗骨质疏松症的潜在候选靶点。
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引用次数: 4
期刊
DNA and cell biology
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