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A Novel Strategy for Authentication and Quantification of Porcine and Water Buffalo Hide Gelatin in Processed Products Using Multiple Reaction Monitoring Mass Spectrometry Approaches.
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-02-04 DOI: 10.1002/elps.202400209
Bidyut Prava Mishra, Naveena B Maheswarappa, B Eswara Rao, Rituparna Banerjee, Prasad M Govindaiah, Balaji B Manohar, Prasana Kumar Rath

Pig skin and water buffalo hides were partially hydrolyzed to produce a heterogeneous mixture of polypeptides, known as gelatin, a commonly used food additive. Specific peptide markers were explored in the context of authentication and relative quantification of water buffalo hide gelatin (BHG) and porcine skin gelatin (PSG) via multiple reaction monitoring-mass spectrometry (MRM-MS). Tryptic gelatin peptides were separated and analyzed with ultra-performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS), and five unique peptide biomarkers were selected for BHG and PSG. Gelatin extraction from BHG and PSG spiked chicken meat patties (CMP) followed by LC-MS/MS MRM-MS revealed two unique bovine gelatin peptides of m/z 781.336 and 852.718 and three unique porcine gelatin peptides of m/z 774.570, 971.776, and 727.436. The optimized MRM-MS protocol was efficient in detecting BHG/PSG from spiked CMP up to 0.5% (w/w). Twenty-five commercial food samples were screened, among which four samples showed the presence of BHG and six samples showed the presence of PSG. The proposed LC-MS/MS MRM strategy provides an efficient and sensitive authentication and traceability of gelatin-containing highly processed food, bakery, and confectionery products.

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引用次数: 0
Editorial Board: Electrophoresis 1–2'25
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-27 DOI: 10.1002/elps.202570011
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引用次数: 0
Contents: Electrophoresis 1–2'25
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-27 DOI: 10.1002/elps.202570012
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引用次数: 0
Advances and Applications of Capillary Electrophoresis Mass Spectrometry in Food Analysis: Strategies for Online and Offline Preconcentration. 毛细管电泳质谱法在食品分析中的进展与应用:在线和离线富集策略。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-20 DOI: 10.1002/elps.202400211
Nadhiratul-Farihin Semail, Noorfatimah Yahaya, Ahmad Husaini Mohamed, David Da Yong Chen, Nur Nadhirah Mohamad Zain

Advancements in food technology have increased the need for thorough analysis to ensure food safety, quality, and compliance with regulatory requirements. Capillary electrophoresis-mass spectrometry (CE-MS) has emerged as a powerful tool in food analysis due to its high separation efficiency, low sample consumption, and ability to handle complex matrices. However, challenges such as the use of volatile running buffers and maintaining the stability of the electrical circuit connecting the CE and MS systems have been addressed through advancements in interface designs, such as sheathless systems and optimized sheath-liquid compositions. Online and offline preconcentration techniques have significantly enhanced CE-MS sensitivity (up to 1000-fold) through stacking methods such as large volume sample stacking (LVSS) and dynamic pH junction stacking. Meanwhile, offline sample preparation techniques, such as solid-phase extraction (SPE) and liquid-based methods, are essential for removing matrix interferences and preconcentrating targeted analytes. This review explores both online and offline preconcentration methods and emphasizes the importance of CE-MS in helping researchers develop effective strategies for selecting the best preconcentration methods for food analysis.

食品技术的进步增加了对彻底分析的需求,以确保食品安全、质量和符合法规要求。毛细管电泳-质谱法(CE-MS)因其分离效率高、样品消耗少、处理复杂基质能力强等优点,已成为食品分析的有力工具。然而,诸如使用挥发性运行缓冲器和保持连接CE和MS系统的电路稳定性等挑战已经通过界面设计的进步得到了解决,例如无套管系统和优化的套管-液体成分。在线和离线预富集技术通过大体积样品堆叠(LVSS)和动态pH结堆叠等堆叠方法,显著提高了CE-MS的灵敏度(高达1000倍)。同时,离线样品制备技术,如固相萃取(SPE)和液相法,对于去除基质干扰和预浓缩目标分析物是必不可少的。本文综述了在线预浓缩和离线预浓缩方法,并强调了CE-MS在帮助研究人员制定有效策略以选择最佳食品分析预浓缩方法方面的重要性。
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引用次数: 0
Thermal Analysis of Electromagnetic Induction Heating for Cylinder-Shaped Objects. 圆柱形物体电磁感应加热的热分析。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-20 DOI: 10.1002/elps.202400216
Amir Komeili Birjandi, Prashanta Dutta

Induction heating is one of the cleanest and most efficient methods for heating materials, utilizing electromagnetic fields induced through AC electric current. This article reports an analytical solution for transient heat transfer in a three-dimensional (3D) cylindrical object under induction heating. A simplified form of Maxwell's equations is solved to determine the heat generation inside the cylinder by calculating the current density distribution within the body. The temperature within the solid is found from the solution of the unsteady heat equation based on Green's function. Owing to multiple spatial dimensions and time, a separation of variables technique is used to find Green's function. In addition, an innovative algorithm is proposed to take care of the variable material properties in analytical treatment. The analytical solution for temperature is verified with the data obtained from experiments for identical operating conditions. The analytical solution is used to study the impact of heat transfer coefficient and input AC current frequency and amplitude during transient heat diffusion. Our analytical solution suggests that the temperature-dependent material properties significantly affect the thermal response within the solid. Unlike many other conventional heating methods, the thermal boundary condition changes with time in induction heating, which makes our solution much more challenging.

感应加热利用交流电流产生的电磁场,是加热材料最清洁、最有效的方法之一。本文报道了三维(3D)圆柱形物体在感应加热下的瞬态传热的解析解。求解了麦克斯韦方程组的简化形式,通过计算体内的电流密度分布来确定柱体内的发热量。固体内部的温度由基于格林函数的非定常热方程的解求得。由于Green函数具有多个空间维度和时间维度,因此采用分离变量的方法求解Green函数。此外,提出了一种创新的算法,以照顾在分析处理的可变材料性质。用相同工况下的实验数据对温度解析解进行了验证。利用解析解研究了传热系数、输入交流电流频率和幅值对瞬态热扩散的影响。我们的解析解表明,与温度相关的材料性质显著影响固体内部的热响应。与许多传统加热方法不同,感应加热的热边界条件随时间而变化,这使得我们的求解更具挑战性。
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引用次数: 0
Enabling icIEF Peak Identification of AAV Capsid Proteins by Fractionation on MauriceFlex and Subsequent Analysis by LC–MS 利用MauriceFlex对AAV衣壳蛋白进行icIEF峰鉴定,并利用LC-MS进行分析。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-20 DOI: 10.1002/elps.202400201
Will McElroy, Sisi Huang, Xiaoping He, Cheng Zhou, Christopher D. Heger, Thomas W. Powers, Melissa M. Anderson, Courtney Sloan, Thomas F. Lerch

A significant limitation of imaged capillary electric focusing (icIEF) is the inability to identify and characterize specific species in the electropherogram. This has led to the development of complementary ion-exchange chromatography (IEX)-based methods that are amenable to either fraction collection and subsequent characterization or online IEX coupled to mass spectrometry. To overcome this limitation while maintaining the use of icIEF, novel approaches, including an icIEF separation and fractionation technology (MauriceFlex, ProteinSimple), have been developed. This approach enables the fractionation of various icIEF peaks, which can then be characterized by mass spectrometry to confirm the identity of the separated charged species. Herein, the MauriceFlex technology was applied to adeno-associated viral (AAV) gene therapy products, which contain a DNA transgene packaged into a protein capsid and have shown tremendous therapeutic potential in recent years. Utilizing the MauriceFlex system, we developed an approach for the separation of charged species from AAV capsid viral proteins (VP) by icIEF and subsequent characterization by liquid chromatography and mass spectrometry (LC–MS). When applying the same sample preparation, charge profiles of AAV capsid proteins on the MauriceFlex instrument were demonstrated to be consistent with those from the original Maurice platform, the industrial gold standard. Optimization of the VP icIEF fractionation method required the development of a method for low concentration samples, optimization of mobilization conditions, enhancement of fraction recovery, and maintenance of protein stability post fractionation. Herein, we were able to successfully collect charge-separated VP fraction samples and subsequently analyze them by MS analysis. In addition, a workflow for AAV capsid protein characterization based on icIEF separation and fractionation coupled with downstream LC–MS has been established for the confirmation of VP identity and additional characterization of capsid protein heterogeneity.

成像毛细管电聚焦(icIEF)的一个显著限制是无法识别和表征特定物种的电泳图。这导致了基于互补离子交换色谱(IEX)的方法的发展,这种方法既适用于组分收集和随后的表征,也适用于在线IEX与质谱相结合的方法。为了克服这一限制,同时保持使用icIEF,已经开发了新的方法,包括icIEF分离和分馏技术(MauriceFlex, ProteinSimple)。这种方法可以分离各种icIEF峰,然后用质谱法对其进行表征,以确认分离的带电物质的身份。本文将MauriceFlex技术应用于腺相关病毒(adeno-associated viral, AAV)基因治疗产品,该产品将DNA转基因包装在蛋白质衣壳中,近年来显示出巨大的治疗潜力。利用MauriceFlex系统,我们开发了一种通过icIEF分离AAV衣壳病毒蛋白(VP)的带电种,并随后通过液相色谱和质谱(LC-MS)进行鉴定的方法。当应用相同的样品制备时,在MauriceFlex仪器上的AAV衣壳蛋白的电荷谱被证明与原始Maurice平台(工业金标准)上的电荷谱一致。优化VP icIEF分离方法需要开发一种低浓度样品的方法,优化动员条件,提高分离回收率,并保持分离后蛋白质的稳定性。在这里,我们能够成功地收集电荷分离的VP馏分样品,并随后通过质谱分析对其进行分析。此外,建立了一套基于icIEF分离和分离以及下游LC-MS的AAV衣壳蛋白鉴定工作流程,以确认VP的身份并进一步表征衣壳蛋白的异质性。
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引用次数: 0
Spatio-Temporal Change of Skin and Oral Microbiota: A Longitudinal Study of Microbial Diversity and Stability 皮肤和口腔微生物群的时空变化:微生物多样性和稳定性的纵向研究。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-12 DOI: 10.1002/elps.202400160
Han Zhang, Anqi Chen, Shilin Li, Kaiqin Chen, Xuechun You, Yingnan Bian, Chengtao Li, Shiquan Liu, Jiang Huang, Suhua Zhang

The human skin and oral cavity harbor complex microbial communities, which exist in dynamic equilibrium with the host's physiological state and the external environment. This study investigates the microbial atlas of human skin and oral cavities using samples collected over a 10-month period, aiming to assess how both internal and external factors influence the human microbiome. We examined bacterial community diversity and stability across various body sites, including palm and nasal skin, saliva, and oral epithelial cells, during environmental changes and a COVID-19 pandemic. The skin microbiome was confirmed to display spatial and temporal stability compared to the oral microbiome, particularly the oral epithelium, which was susceptible to changes in the host's physiological state and immune response. Moreover, significant differences in the microbial community structure among the 4 sample types were observed, and 87 distinct bacteria biomarkers were identified. The random forest prediction model achieved an overall prediction accuracy of 95.24% across the four types of samples studied. Additionally, nasal skin samples showed significant promise for individual identification through profiling the skin microbiota. These findings highlight the potential of skin and oral microbiota as forensic markers for inferring body sites and identifying individuals. In summary, despite facing limitations such as a small cohort size and the need for broader validation, this research provides an overall perspective and initial insights for refining experimental designs and conducting in-depth research in various microbial research fields.

人体皮肤和口腔内有复杂的微生物群落,它们与宿主的生理状态和外界环境处于动态平衡状态。本研究利用10个月采集的样本调查了人类皮肤和口腔的微生物图谱,旨在评估内部和外部因素如何影响人类微生物组。我们研究了环境变化和COVID-19大流行期间不同身体部位的细菌群落多样性和稳定性,包括手掌和鼻腔皮肤、唾液和口腔上皮细胞。研究证实,与口腔微生物组相比,皮肤微生物组具有空间和时间稳定性,尤其是口腔上皮,易受宿主生理状态和免疫反应的影响。此外,4种样品类型之间的微生物群落结构存在显著差异,鉴定出87种不同的细菌生物标志物。随机森林预测模型对四种样本的总体预测准确率为95.24%。此外,通过分析皮肤微生物群,鼻腔皮肤样本显示出显著的个体鉴定前景。这些发现强调了皮肤和口腔微生物群作为推断身体部位和识别个体的法医标记的潜力。综上所述,尽管面临队列规模小、需要更广泛的验证等限制,但本研究为完善实验设计和在各个微生物研究领域进行深入研究提供了总体视角和初步见解。
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引用次数: 0
Computer Simulation of Sulfated Cyclodextrin-Based Enantioselective Separation of Weak Bases With Partial, High-Concentration Filling of the Chiral Selector and Analyte Detection on the Cathodic Side. 基于硫酸环糊精的弱碱对映选择性分离的计算机模拟,手性选择器部分、高浓度填充及阴极侧分析物检测。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-12 DOI: 10.1002/elps.202400213
Friederike A Sandbaumhüter, Wolfgang Thormann

Computer simulation was utilized to characterize the electrophoretic processes occurring during the enantioselective capillary electrophoresis-mass spectrometry (CE-MS) analysis of ketamine, norketamine, and hydroxynorketamine in a system with partial filling of the capillary with 19 mM (equals 5%) of highly sulfated γ-cyclodextrin (HS-γ-CD) and analyte detection on the cathodic side. Provided that the sample is applied without or with a small amount of the chiral selector, analytes become quickly focused and separated in the thereby formed HS-γ-CD gradient at the cathodic end of the sample compartment. This gradient broadens with time, remains stationary, and gradually reduces its span from the lower side due to diffusion such that analytes with high affinity to the anionic selector become released onto the other side of the focusing gradient where anionic migration and defocusing occur concomitantly. The analytes that remain focused until the migrating HS-γ-CD concentration boundary arrives at the cathodic end of the sample compartment become gradually released into the cathodic part and migrate in the absence of HS-γ-CD toward the detector. This behavior is dependent on the length of the HS-γ-CD zone in the cathodic part of the electrophoretic column, the initial sample zone length, and the sample matrix. The data presented reveal the possibility that only one of the enantiomers of an analyte migrates toward the detector, whereas the other is lost for the analysis, or that both enantiomers migrate toward the cathode but do not separate. Enantiomer separation followed by migration toward the cathode can only be achieved for analytes with rather low complexation constants, such as hydroxynorketamine assessed in this work, and is dependent on the slope of the HS-γ-CD focusing gradient. The gained insights illustrate that dynamic simulation is an indispensable tool to investigate electrophoretic processes of complex systems.

利用计算机模拟对氯胺酮、诺氯胺酮和羟诺氯胺酮的对映选择性毛细管电泳-质谱(CE-MS)分析过程进行了表征,在毛细管中部分填充19 mM(等于5%)的高硫酸化γ-环糊精(HS-γ-CD),并在阴极侧检测分析物。如果样品不加手性选择剂或加少量手性选择剂,分析物在样品室阴极端形成的HS-γ-CD梯度中迅速聚焦和分离。该梯度随着时间的推移而变宽,保持平稳,并由于扩散而从较低的一侧逐渐减小其跨度,使得对阴离子选择剂具有高亲和力的分析物被释放到聚焦梯度的另一侧,在那里阴离子迁移和散焦同时发生。在HS-γ-CD迁移浓度边界到达样品室的阴极端之前保持聚焦的分析物逐渐被释放到阴极部分,并在HS-γ-CD不存在的情况下向检测器迁移。这种行为取决于电泳柱阴极部分HS-γ-CD区长度、初始样品区长度和样品基质。所提供的数据揭示了一种可能性,即分析物中只有一种对映体向检测器迁移,而另一种对映体在分析中丢失,或者两种对映体都向阴极迁移但不分离。对映体分离后向阴极迁移只能在配位常数较低的分析物中实现,例如本研究评估的羟诺氯胺酮,并且依赖于HS-γ-CD聚焦梯度的斜率。所获得的见解表明,动态模拟是研究复杂系统的电泳过程不可或缺的工具。
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引用次数: 0
Comparative Proteomics of Resistant and Susceptible Strains of Frankliniella occidentalis to Abamectin 西方富兰克林菌对阿维菌素耐药和敏感菌株的蛋白质组学比较。
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-09 DOI: 10.1002/elps.202400171
Zahra Gholami, Foad Fatehi, Fatemeh Habibpour Mehraban, Paul A. Haynes, Khalil Talebi Jahromi, Vahid Hosseininaveh, Hadi Mosallanejad, Pär K. Ingvarsson, Naser Farrokhi

Western flower thrips, Frankliniella occidentalis (Thysanoptera: Thripidae) is an invasive agricultural pest with developed resistance to abamectin in some strains due to frequent treatment with the pesticide. In this study, we examined differentially expressed proteins (DEPs) between abamectin-resistant (AbaR; under abamectin selective pressure) and susceptible strains (AbaS; without abamectin selective pressure) of F. occidentalis. Proteins were isolated from second instar larvae of both strains and separated via two-dimensional polyacrylamide gel electrophoresis. Nano-flow liquid chromatography–tandem mass spectrometry identified selected protein spot features. From 70 DEPs, 43 spot features were identified: A total of 23 showed an increase in abundance, and 20 were down-regulated in response to abamectin pressure. The enzymatic and structural proteins were classified into the functional groups of macromolecular metabolisms, signaling and cellular processes, immune system, genetic information processing, and exoskeleton-related proteins. The up-regulation of exoskeleton-related proteins may contribute to forming a thicker cuticle, potentially hindering abamectin penetration, which is an interesting finding that needs further investigation. Two novel proteins, triacylglycerol lipase and cuticle protein CPF 2, were only expressed in AbaR. This work provides insights into abamectin resistance mechanisms in F. occidentalis, which will provide important information for developing insecticide resistance management approaches for this pest.

西方花蓟马,Frankliniella occidentalis(蓟翅目:蓟科)是一种入侵性农业害虫,由于频繁使用阿维菌素,部分品种已产生抗药性。在这项研究中,我们检测了阿巴菌素耐药(AbaR;在阿维菌素选择压力下)和敏感菌株(AbaS;无阿维菌素选择压力)。从两种菌株的二龄幼虫中分离蛋白质,并通过双向聚丙烯酰胺凝胶电泳进行分离。纳米流液相色谱-串联质谱法鉴定了选定的蛋白质斑点特征。从70个dep中鉴定出43个斑点特征:共有23个表现出丰度增加,20个表现出对阿维菌素压力的下调。酶和结构蛋白被划分为大分子代谢、信号和细胞过程、免疫系统、遗传信息处理和外骨骼相关蛋白的功能群。外骨骼相关蛋白的上调可能有助于形成更厚的角质层,潜在地阻碍阿维菌素的渗透,这是一个有趣的发现,需要进一步研究。三酰基甘油脂肪酶和角质层蛋白cpf2仅在AbaR中表达。本研究为了解西方白僵菌对阿维菌素的抗性机制提供了新的思路,为开发该害虫的抗药性管理方法提供了重要的信息。
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引用次数: 0
Editorial Board: Electrophoresis 23–24'24
IF 3 3区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2025-01-07 DOI: 10.1002/elps.202470122
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引用次数: 0
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