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Potensi ekstrak kasar metabolit sekunder yang dihasilkan Trichoderma asperellum dan Pseudomonas fluorescens untuk pengendalian antraknosa pada buah kakao
Pub Date : 2023-04-29 DOI: 10.22302/iribb.jur.mp.v91i1.524
Christina Oktora Matondang, Muklasin, Loekas Soesanto
Cocoa pod anthracnose is an important disease of cocoa and can reduce yields. Many attempts have been made to control anthracnose rot disease on cocoa pods but have not been successful yet. This study aimed to examine the potency of secondary metabolite crude extracts produced by Trichoderma asperellum and Pseudomonas fluorescens solely or in combination in controlling anthracnose rot disease of cocoa pods in the field at Silo Bonto Village, Asahan Regency, North Sumatera Province. The secondary metabolite crude extracts was prepared by the form of conidia or T. asperellum and P. fluorescens cells. A randomized block design was used to assessed four treatments i.e. T. asperellum + P. fluorescens, T. asperellum, P. fluorescens secondary metabolite crude extracts and control, which was repeated six times. The observation parameters were the percentage of healthy and diseased pods (anthracnose fruit rot). The results showed that the secondary metabolite crude extracts of T. asperellum, P. fluorescens, and T. asperellum + P. fluorescens reduced the number of diseased fruits by 94.71, 89.09, and 92.09% compared to the control respectively. The increasing of  healthy fruits number in the application of secondary metabolite crude extracts of T. asperellum, P. fluorescens, and T. asperellum + P. fluorescens was 52.68, 54.20, and 54.18%, respectively.
可可豆荚炭疽病是可可的一种重要病害,可导致产量下降。为了控制可可豆上的炭疽病,人们进行了许多尝试,但尚未取得成功。在北苏门答腊省Asahan Regency Silo Bonto村,本研究旨在研究由曲霉木霉和荧光假单胞菌单独或联合产生的次生代谢产物粗提取物对可可豆荚炭疽病的防治效果。次生代谢产物粗提物以分生孢子或曲霉和荧光假单胞的形式制备。采用随机区组设计评价曲霉+荧光假单孢菌、曲霉+荧光假单孢菌次生代谢物粗提物和对照4个处理,重复6次。观察参数为健康荚果和患病荚果(炭疽病果腐病)的百分率。结果表明,与对照相比,曲霉次生代谢产物粗提物、荧光假单胞菌粗提物和曲霉+荧光假单胞菌粗提物分别减少病果数94.71、89.09和92.09%。施用曲霉次生代谢产物粗提物、荧光葡萄球菌粗提物和曲霉+荧光葡萄球菌粗提物的健康果实数量分别增加52.68%、54.20%和54.18%。
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引用次数: 0
Pemodelan protein dan analisis molecular docking enzim β-glukanase solat Bacillus subtilis W3.15
Pub Date : 2023-04-28 DOI: 10.22302/iribb.jur.mp.v91i1.523
Ainia Hanifitri, L. Ambarsari, N. R. Mubarik
The β-glucanase enzyme is an enzyme protein that can hydrolyze β-glucan, one of the main components of the fungal cell wall. This enzyme protein is produced by several bacteria, one of which is B. subtilis. The three-dimensional (3D) structure of proteins is necessary to understand their properties and functions of proteins. Enzyme proteins can be analyzed for their structure and function using in silico method. This study aims to detect the β-glucanase gene from B. subtilis W3.15 and analyze it using the in silico method. The methods in this research are homology modeling and molecular docking analyses. Modeling was carried out using the SWISS-MODEL server and docking analysis using the PLANTS 1.1 program. Modeling the β-glucanase enzyme is based on the template of the β-glucanase enzyme protein model with PDB code 3o5s. The results of sequence alignment and model visualization were quite good as indicated by the model having a Ramachandran Plot value in the favored area of 91.10 %, a MolProbity score of 0.95, and a QMEAN value of 0.90 ± 0.06. The β-glucanase enzyme model was then docked using the PLANTS1.1 program with native ligand B3P, 1,4-β-D-Glucan, D-glucose, β-D-Glucan from oats, and N-Acetyl glucosamine. The results of docking analysis showed that the β-glucan ligand (β-D-glucan from oats) used as a substrate in the cultivation of isolate B. subtilis W3.15 had a better binding energy prediction value compared to the B3P ligand, which is a natural ligand in the template proteins.  [Keywords: β-Glucan, β-D-Glucan from oat, ligand, PLANTS 1.1, 3D structure, SWISS-MODEL]
β-葡聚糖酶是一种能够水解真菌细胞壁主要成分之一β-葡聚糖的酶蛋白。这种酶蛋白是由几种细菌产生的,其中一种是枯草芽孢杆菌。蛋白质的三维结构是了解蛋白质性质和功能的必要条件。酶蛋白的结构和功能可以用计算机分析方法进行分析。本研究旨在对枯草芽孢杆菌W3.15中β-葡聚糖酶基因进行检测,并采用硅基法对其进行分析。本研究采用同源建模和分子对接分析方法。采用SWISS-MODEL服务器进行建模,采用PLANTS 1.1程序进行对接分析。β-葡聚糖酶的建模是基于PDB代码为3o5s的β-葡聚糖酶蛋白模型模板。结果表明,该模型的Ramachandran Plot值为91.10%,MolProbity评分为0.95,QMEAN值为0.90±0.06。然后使用PLANTS1.1程序将β-葡聚糖酶模型与天然配体B3P、1,4-β- d -葡聚糖、d -葡萄糖、燕麦β- d -葡聚糖和n -乙酰氨基葡萄糖进行对接。对接分析结果表明,与模板蛋白中的天然配体B3P配体相比,在培养枯草芽孢杆菌W3.15分离物时,作为底物的β-葡聚糖配体(来自燕麦的β- d -葡聚糖)具有更好的结合能预测值。[关键词:β-葡聚糖,燕麦β- d -葡聚糖,配体,PLANTS 1.1, 3D结构,SWISS-MODEL]
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引用次数: 0
Biocontrol activity of endophytic bacteria from cocoa against Phytophthora sp. and Colletotrichum sp. 可可内生细菌对疫霉和炭疽病的防生活性研究。
Pub Date : 2023-04-28 DOI: 10.22302/iribb.jur.mp.v91i1.522
G. Wijaya, Agustin Krisna Wardani, D. Eris
Cocoa (Theobroma cacao L.) and chili pepper (Capsicum annuum L.) are commonly cultivated by farmers, and in some cases, both crops are grown together in intercropping systems. The main pathogen infected cocoa is the Phytophthora sp. fungus, which causes fruit rot, stem cancer, and leaf blight, while Colletotrichum sp. causes anthracnose in chili pepper plants. The ability of endophytic bacteria to inhibit the growth of fungi and bacterial pathogens is well known. In this study, the biocontrol ability of endophytic bacteria against fungal pathogens was tested, and a biocontrol preliminary test was also observed by examining their potential inhibition on Chromobacterium violaceum called antiquorum sensing test. Endophytic bacteria were isolated from cocoa plants, while Phytophthora and Colletotrichum were isolated from cocoa and chili pepper plants that showed symptoms of fruit rot and anthracnose. A total of 34 endophytic bacterial isolates were successfully obtained, with 10 isolates from leaves (DK), 12 isolates from branches (RK), and 12 isolates from roots (KA) of cocoa plant ICCRI 4. Sixteen isolates showed quorum sensing ability, which AHL degradation index ranging from 0.44 – 1.56. Antagonistic tests showed that 11 out of 16 isolates had strong antibiosis against Phytophthora sp., with inhibition zones ranging from 0.6-1.35 cm. Meanwhile, 10 out of 16 isolates had strong antibiotics against Colletotrichum sp., with clear zones ranging from 0.6 – 1.1 cm. The three best endophytic bacterial isolates that had a combination of antiquorum sensing ability on C. violaceum and biocontrol against Phytophthora sp. and Colletotrichum sp. were RK 11, KA 1, and KA 8.[Keywords: antagonist, ahl lactonase, plant beneficial microorganism]
可可(Theobroma cacao L.)和辣椒(Capsicum annuum L.)通常由农民种植,在某些情况下,这两种作物在间作系统中一起种植。感染可可的主要病原体是疫霉,它会引起果实腐烂、茎癌和叶枯病,而炭疽病菌则会引起辣椒植物的炭疽病。内生细菌抑制真菌和细菌病原体生长的能力是众所周知的。本研究测试了内生细菌对真菌病原菌的生物防治能力,并通过检测其对紫色色杆菌的潜在抑制作用进行了初步的生物防治试验。从可可植株中分离到内生细菌,从可可和辣椒植株中分离到疫霉和炭疽病。共分离得到34株内生细菌,其中10株来自可可植株ICCRI 4的叶片(DK), 12株来自枝条(RK), 12株来自根(KA)。16株菌株具有群体感应能力,AHL降解指数在0.44 ~ 1.56之间。拮抗试验表明,16株分离物中有11株对疫霉菌有较强的抗菌作用,抑菌区在0.6 ~ 1.35 cm之间。同时,16株分离菌中有10株对炭疽病菌有较强的抗菌作用,其清除带范围在0.6 ~ 1.1 cm之间。对紫葡萄球菌具有抗菌素感应能力和对疫霉和炭疽病菌具有生物防治能力的3株内生细菌分别是rk11、KA 1和KA 8。[关键词:拮抗剂,ahl内酯酶,植物有益微生物]
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引用次数: 0
Improvement of purification process of stevia extract by combination of microfiltration and ultrafiltration 微滤与超滤联合提纯甜菊叶提取物的工艺改进
Pub Date : 2023-04-20 DOI: 10.22302/iribb.jur.mp.v91i1.521
M. Silaen, E. Noor, M. Rahayuningsih
Microfiltration and ultrafiltration are used for the purification process of stevia extract to retain steviosides and remove tannins. The main objective of this study was to obtain the operating conditions for the purification process of stevia extract that resulted in the lowest stevioside rejection and highest tannin rejection. The purification process of stevia extract using microfiltration membrane was carried out at transmembrane pressure (1.20, 1.40, 1.65, 1.80, and 1.90 bar), cross flow velocity (0.04, 0.06, and 0.11 m s-1), and stevioside concentration of feed (7.12, 10.25, 14.03, and 18.47 g L-1). The stevia extract purification process used ultrafiltration membrane at transmembrane pressure (1.20, 1.40, 1.65, 1.80, and 1.90 bar), cross flow velocity (0.06, 0.09, and 0.12 m s-1), and stevioside concentration of feed (4.59 and 10.36 g L-1). The first step purification process was carried out using a microfiltration membrane and the resulting permeate was used as feed for the ultrafiltration process. The second step purification process was carried out using an ultrafiltration membrane. The best operating conditions of the microfiltration process were feed stevioside concentration of 14.03 g L-1 at a transmembrane pressure of 1.90 bar and a cross flow velocity of 0.11 m s-1 with a permeate flux of 82.90 L m-2 h-1. The best operating conditions of the ultrafiltration process used a feed stevioside concentration of 10.36 g L-1 with a permeate flux of 26.51 L m-2 h-1 at a transmembrane pressure of 1.90 bar and a cross flow velocity of 0.12 m s-1. The microfiltration and ultrafiltration processes resulted in total stevioside rejection of 59.52 % and total tannin rejection of 57.99 %.
采用微滤和超滤两种方法对甜叶菊提取物进行纯化,以保留甜叶菊苷,去除单宁。本研究的主要目的是获得甜叶菊提取物的纯化工艺的操作条件,使甜叶菊苷排斥率最低,单宁排斥率最高。在跨膜压力(1.20、1.40、1.65、1.80和1.90 bar)、横向流速(0.04、0.06和0.11 m s-1)和饲料中甜菊苷浓度(7.12、10.25、14.03和18.47 g L-1)的条件下,采用微滤膜对甜菊糖提取物进行纯化。甜叶菊提取物的纯化工艺采用超滤膜,跨膜压力分别为1.20、1.40、1.65、1.80和1.90 bar,交叉流速分别为0.06、0.09和0.12 m s-1,饲料中甜叶菊苷浓度分别为4.59和10.36 g L-1。采用微滤膜进行第一步净化,所得的渗透液作为超滤过程的进料。采用超滤膜进行第二步净化。微滤工艺的最佳操作条件为:入料浓度为14.03 g L-1,跨膜压力为1.90 bar,横流速度为0.11 m s-1,渗透通量为82.90 L m-2 h-1。超滤工艺的最佳操作条件为进料甜菊苷浓度为10.36 g L-1,渗透通量为26.51 L m-2 h-1,跨膜压力为1.90 bar,横流速度为0.12 m s-1。微滤和超滤工艺对甜菊苷的总去除率为59.52%,对单宁的总去除率为57.99%。
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引用次数: 0
Stability of B50 biodiesel added with glycerol ester additive based on palm oil oleic acid 棕榈油酸基甘油酯添加剂对B50生物柴油稳定性的影响
Pub Date : 2023-04-20 DOI: 10.22302/iribb.jur.mp.v91i1.526
F. Dimawarnita, Y. Faramitha, E. Hambali
Biodiesel in Indonesia is a mixture of Fatty Acid Methyl Ester (FAME) and diesel oil. Mixing FAME and diesel oil is challenging since FAME is separated from diesel oil at low temperatures. Changes in the physico-chemical properties of biodiesel during storage decrease biodiesel quality due to dissolved oxygen, potentially damaging the engine. Using glycerol ester (GE) as an additive can be an alternative solution to tackle that problem. This research examined the stability of GE-added biodiesel. As a comparison, commercial diethyl ether (DEE) additive was used. The concentration of additive added to biodiesel varied at 1000, 2000, and 3000 ppm while the storage temperature varied at 12, 25, and 42℃. The stability of biodiesel was evaluated for three months by measuring the acid value, viscosity, corrosion rate, and water content. The acid values ​​​​of the various types and concentrations of additives still meet the SNI 7182-2015 standard (0.5 mg KOH g-1 sample) with a value range of 0.148-  0.392 mg KOH g-1 sample. Kinematic viscosity had a value range of 3.12-3.58 cst, which also meets the SNI 7182-2015 standard (2.3-6 cst). The highest corrosion rate for GE and DEE was in the first week, with values of 0.447 and 0.261 mpy, respectively. Both B50 biodiesel control and the addition of 1000 ppm GE had the same water content value on the 18th day, which was 0.046%, and this value was considered the highest water content. This means adding an additive can maintain the water content in B50 biodiesel. Overall, GE additives in B50 biodiesel with various concentrations comply with SNI 7182-2015 standard.
印度尼西亚的生物柴油是脂肪酸甲酯(FAME)和柴油的混合物。混合FAME和柴油是具有挑战性的,因为FAME是在低温下从柴油中分离出来的。在储存过程中,生物柴油的物理化学性质会发生变化,因为溶解氧会降低生物柴油的质量,可能会损坏发动机。使用甘油酯(GE)作为添加剂可能是解决这个问题的另一种解决方案。本研究考察了ge添加生物柴油的稳定性。作为对比,采用了市售的乙醚(DEE)添加剂。在生物柴油中添加添加剂的浓度为1000、2000和3000 ppm,储存温度为12、25和42℃。通过测定生物柴油的酸值、粘度、腐蚀速率和含水量,对生物柴油的稳定性进行了三个月的评价。各种类型和浓度的添加剂的酸值仍然符合SNI 7182-2015标准(0.5 mg KOH g-1样品),值范围为0.148- 0.392 mg KOH g-1样品。运动粘度的取值范围为3.12-3.58 cst,也符合SNI 7182-2015标准(2.3-6 cst)。GE和DEE的腐蚀速率在第一周最高,分别为0.447和0.261 mpy。B50生物柴油对照和添加1000 ppm GE在第18天的含水量值相同,均为0.046%,该值被认为是最高含水量。这意味着添加添加剂可以保持B50生物柴油中的水分含量。总体而言,B50生物柴油中不同浓度的GE添加剂符合SNI 7182-2015标准。
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引用次数: 0
Effect of enzymatic hydrolysis and nitrogen on Saccharomyces cerevisiae β-glucan production from Manihot utilissima and Maranta arunadinacea waste 酶解和氮对酿酒酵母产β-葡聚糖的影响
Pub Date : 2023-04-06 DOI: 10.22302/iribb.jur.mp.v91i1.508
M. Gozan, Fita Sefriana, Yemirta Yemirta, M. A. Darmawan
This experiment utilised cassava (Manihot utillissima) and arrowroot (Maranta arunadinacea) wastes as the medium of propagation of Saccharomyces cerevisiae to produce β-glucan. The amyloglucosidase hydrolysed the waste, followed by fermentation in the nitrogenous medium by S. cerevisiae. The β-glucan pellet was extracted using 2% NaOH alkaline solution at 90°C for 5 hours, followed by a series of centrifugation processes. The highest glucose concentration from hydrolysis resulted from adding 57.5 mg amyloglucosidase enzyme for arrowroot waste with 95.93% conversion and 50 mg enzyme for cassava waste with 64.70% conversion. The highest amount was obtained for producing S. cerevisiae by adding 4.75 g peptone to all samples. The optimum number of cells was obtained at 1.61 x 108 colonies at t = 48 hours for arrowroot waste and 8.55 x 107 colonies at t = 48 hours for cassava waste. For β-glucan production, the highest number was obtained by using 3.99 g of peptone for cassava waste with a yield of 1.20% and by using 4.75 g of peptone for arrowroot waste with a yield of 1.23%. For β-glucan pellet, the highest number was 1.77 g L-1 (0.18 % b/v) from cassava waste medium and 1.91 g L-1 (0.19% b/v) from arrowroot waste. Mutant cells in the Yeast Extract–Peptone–Glycerol (YPG) medium produced 6.56 g L-1 (0.66% b/v) β-glucan pellet, while wild-type cells in the similar medium produced 1.84 g L-1 (0.18% b/v).
本试验以木薯(Manihot utillissima)和竹芋(Maranta arunadinacea)废料作为酿酒酵母(Saccharomyces cerevisiae)繁殖的培养基,生产β-葡聚糖。淀粉葡糖苷酶水解废物,然后由酿酒酵母在含氮培养基中发酵。用2% NaOH碱性溶液在90℃下提取β-葡聚糖小球5小时,然后进行一系列离心处理。当添加57.5 mg淀粉葡糖苷酶时,竹芋渣的转化率为95.93%;添加50 mg酶时,木薯渣的转化率为64.70%。在所有样品中加入4.75 g蛋白胨时,产酿酒酵母的量最高。在t = 48 h时,芋根废物的最佳细胞数为1.61 × 108个菌落,木薯废物的最佳细胞数为8.55 × 107个菌落。对于β-葡聚糖的产率,木薯废料用3.99 g蛋白胨产率为1.20%,竹芋废料用4.75 g蛋白胨产率为1.23%,产率最高。木薯废培养基中β-葡聚糖颗粒的最高含量为1.77 g L-1 (0.18% b/v),竹芋废培养基中β-葡聚糖颗粒的最高含量为1.91 g L-1 (0.19% b/v)。突变细胞在酵母提取物-胨-甘油(YPG)培养基中产生6.56 g L-1 (0.66% b/v) β-葡聚糖小球,而野生型细胞在类似培养基中产生1.84 g L-1 (0.18% b/v)。
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引用次数: 0
Transformation of DHN1 gene and DHN promoter constructs into sugarcane calli, regeneration of the calli, and acclimatization of the plantlets 研究了DHN1基因和DHN启动子在甘蔗愈伤组织中的转化、愈伤组织的再生和植株的驯化
Pub Date : 2023-04-06 DOI: 10.22302/iribb.jur.mp.v91i1.512
H. Minarsih, Fauziatul Fitriyah, A. A. Aksa, T. Turhadi, D. Sukmadjaya, Sustiprajitno Sustiprajitno
Dehydrin is known to have an important role in plant response and adaptation to abiotic stresses including drought and high salinity. Previous research reported the isolation of the full-length coding sequence (CDS) of DHN1 from sugarcane var. PSJT 941, and it shares a high homology with DHN genes from sorghum and other sugarcane varieties. In this study, the full-length CDS was cloned under the constitutive CaMV35S promoter and transformed into sugarcane calli mediated by Agrobacterium tumefaciens. The DHN promoter, Pr-1DHNSo, was also successfully isolated from the sugarcane var. PSJT 941 and cloned into the pBI121 expression vector. The promoter construct was subsequently transformed into sugarcane calli of var. Kidang Kencana. Transgenic sugarcane carrying DHN1 gene and DHN promoter constructs were regenerated according to the standard protocol of sugarcane tissue culture. Optimization of an acclimatization protocol using modified post-rooting media was also conducted and the resulting protocol reduced the total mortality rates of the transformed plantlets. The presence of the gene and promoter constructs was periodically tested by PCR using specific primers. The genotyping results showed that the constructs were present for more than a year after transformation.
脱氢酶在植物对干旱和高盐度等非生物胁迫的响应和适应中具有重要作用。已有研究报道从甘蔗品种PSJT 941中分离到DHN1基因的全长编码序列(CDS),该基因与高粱等甘蔗品种的DHN基因具有较高的同源性。本研究通过CaMV35S启动子克隆了全长CDS,并将其转化为农杆菌介导的甘蔗愈伤组织。从甘蔗品种PSJT 941中成功分离出DHN启动子Pr-1DHNSo,并将其克隆到pBI121表达载体中。随后将该启动子结构转化为甘蔗愈伤组织。根据甘蔗组织培养标准方案,再生了携带DHN1基因和DHN启动子的转基因甘蔗。利用改良的生根后培养基对驯化方案进行了优化,该方案降低了转化植株的总死亡率。利用特异引物定期检测基因和启动子结构的存在。基因分型结果表明,这些结构在转化后存在一年多。
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引用次数: 0
Optimasi sistem kultur dan media untuk peningkatan tinggi tunas in vitro kelapa sawit 优化培养和媒体系统,以提高棕榈油的体外芽
Pub Date : 2023-04-06 DOI: 10.22302/iribb.jur.mp.v91i1.511
Masna Maya Sinta, Rizka Tamania Saptari, Imron Riyadi, Sumaryono Sumaryono
Optimization of in vitro shoot growth is necessary to shorten the culture time and produce vigorous oil palm plantlets. This research was conducted to determine the best media and culture techniques to accelerate in vitro shoot growth of oil palm. Shoots of oil palm derived from somatic embryogenesis were grown on DF media with two culture systems (solid medium and double-layer) combined with hormone treatments (0.5-1 mg L-1 giberellin/GA3 and 0.5 mg L-1 Benzyl amino purine/BAP or thidiazuron/ TDZ). Further optimization was conducted using different bottle closures (polypropylene screw caps and plastic wraps) and macronutrients (standard or double concentrations). This research was conducted using a completely randomized design (CRD), with each treatment consisting of 5 bottle replications and each bottle consisting of 5 shoots. The results showed that media with double-layer system combined with GA3 (0.5-1 mg L-1) and TDZ (0.5 mg L-1) gave the highest shoot height increment. The use of double-strength macronutrient media combined with screw bottle caps increased shoot height (136-167 %) and decreased shoot tip necrosis (0-24 %). Plastic wrap bottle caps increased shoot tip necrosis (STN), while doubling macronutrients reduced STN. The growth of oil palm shoots began to slow down after 5 weeks of culture. In conclusion, the optimal conditions for in vitro shoot growth of oil palm were at usage of double-layer media added with GA3 0.5-1 mg L-1, TDZ 0.5 mg L-1, and double macronutrients on bottle jars with polypropylene screw caps.
优化离体苗的生长是缩短培养时间、培育出健壮的油棕苗的必要条件。本研究旨在确定促进油棕离体茎部生长的最佳培养基和培养技术。采用两种培养体系(固体培养基和双层培养基)结合激素处理(0.5-1 mg L-1赤霉素/GA3和0.5 mg L-1苄基氨基嘌呤/BAP或硫代脲/ TDZ),在DF培养基上培养油棕体胚幼枝。使用不同的瓶盖(聚丙烯螺旋盖和塑料包装)和常量营养素(标准浓度或双倍浓度)进行进一步优化。试验采用完全随机设计(CRD),每个处理5个重复,每瓶5个苗。结果表明,GA3 (0.5-1 mg L-1)和TDZ (0.5 mg L-1)复合双层培养基的茎高增长量最大;使用双强度宏量营养素培养基配合螺旋瓶盖,可使茎高增加(136 ~ 167%),根尖坏死减少(0 ~ 24%)。保鲜膜瓶盖增加了茎尖坏死(STN),而增加大量营养物质则减少了STN。培养5周后,油棕幼苗的生长开始放缓。综上所述,油棕离体生长的最佳条件是在聚丙烯螺旋盖瓶罐上添加GA3 0.5-1 mg L-1、TDZ 0.5 mg L-1的双层培养基和双重宏量营养素。
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引用次数: 0
Isolation and selection of siderophore-producing bacteria from roots of Simadu pineapple (Ananas comosus) in Subang District, West Java 西爪哇苏邦地区司马都凤梨根产铁载体细菌的分离与筛选
Pub Date : 2022-11-08 DOI: 10.22302/iribb.jur.mp.v90i2.502
Hanifah Fuadi, P. Suryadarma, Khaswar Syamsu, S. Surono, Nurika Asih Setiyani, Selvia Mahilda Ridhoha, Aninda Zahra, Nadia Stepani, Muhammad Rasyid Ramadhan
Abstrak Bakteri mampu menghasilkan siderofor umtuk mengkelat besi dalam lingkungan dan digunakan oleh tanaman sebagai kofaktor dalam pembentukan klorofil untuk pembentukan glukosa. Penelitian ini bertujuan untuk mendapatkan bakteri penghasil siderofor tinggi dari akar nanas Simadu, Kabupaten Subang Provinsi Jawa Barat. Bakteri diisolasi dari akar nanas Simadu, kemudian diseleksi dengan membedakan morfologinya dan diidentifikasi sebagai penghasil siderofor pada media Chrome Azurol S (CAS). Diperoleh 10 isolat bakteri (M1 sampai dengan M10) yang mampu menghasilkan siderofor. Isolat bakteri M7 memiliki kemampuan menghasilkan siderofor tertinggi. Isolat M7 teridentifikasi sebagai bakteri Gram negatif. Hasil analisis pohon filogenetik berdasarkan sekuensing 16S rDNA menunjukkan isolat kelompok genus Providencia. Dibandingkan dengan Providencia vermicola ,  isolat standar dari InaCC yang berasal dari akar Curcuma zedoaria, M7 menunjukkan produksi siderofor yang lebih tinggi pada media LB pada kondisi aerobik.[Kata kunci: Isolasi bakteri, Providencia, akumulasi siderofor, akar nanas Simadu Subang]Abstract Bacteria can produce siderophores for chelating iron in environments and are used by plants as an ingredient cofactor in building chlorophyll for glucose production. This study aims to obtain high siderophore-producing bacteria from the roots of pineapple Simadu, Subang District, West Java Province. Bacteria were isolated from Simadu pineapple roots, then selected by distinguishing their morphology and identified as producing siderophores with Chrome Azurol S (CAS) media. Obtained 10 bacterial isolates (M1 to M10) capable of producing siderophores. Bacterial isolate M7 had the highest siderophore production ability. M7 isolate was identified as Gram-negative bacteria. The results of the phylogenetic tree analysis based on 16S rDNA sequencing showed this isolate as the genus Providencia. Compared to the Providencia vermicola as reference isolate from InaCC derived from the roots of Curcuma zedoaria, M7 showed higher siderophore production in LB media under aerobic conditions.[Keywords:          Bacteria isolation, Providencia, siderophore accumulation, Simadu Subang pineapple root]
抽象的细菌可以在环境中产生根茎铁,并被植物用作组成葡萄糖的叶绿素的共同因素。这项研究的目标是获得一种从西爪哇省苏邦凤梨根产出的高传染性菌。从菠萝根中分离出来的细菌,然后通过对其形态的区分来选择,并确定为Chrome Azurol S (CAS)中红细胞生成器的产地。获得10种细菌分离物(M1至M10),可以产生响尾蛇素。M7细菌分离物具有产生最少量病原体的能力。一种M7异体被确定为阴性克细菌。根据16S序列rDNA对纤维遗传树的分析,发现了维罗维尼亚属中的异构体。与Providencia vermicola相比,来自zedoaria curacc的一种标准的非acc分离物,M7显示出在LB条件下的空气传播中,它的含量更高。[关键词:隔离细菌、供应物、菌丝沉积、菠萝根苏bang]这项研究旨在确定来自西爪哇省苏邦菠萝区sibang地区的高侧产细菌。细菌被从菠萝根中分离出来,然后被他们的形态和标识为美国生产带有铬Azurol S (CAS)对流的微生物。包含10个噬菌体异化(M1至M10)可生产响尾蛇毒液。噬菌体军情七处有最最具传染性的病原体生产能力。M7异化被认为是一种微负细菌。植物遗传学树分析的结果显示,这棵树与供养者属的异构体相同。参考维米科拉提供的证据,从无accola的起源中提取出来,M7在空气条件下的LB媒体上展示了更高的侧氧生产。[Keywords:隔离细菌,供养物,侧晕晕,菠萝根Simadu Subang]
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引用次数: 0
Pengujian aktifitas antifungi kitosan, nanokitosan, dan nanokitosan-Cu secara in vitro terhadap Colletotrichum gloeosporioides pada buah mangga (Mangifera indica) 测试kitosan、nanokitosan和nanokseicu在芒果中对Colletotrichum gloeporioides进行体外抗真菌活动
Pub Date : 2022-10-31 DOI: 10.22302/iribb.jur.mp.v90i2.510
S. Wahyuni, M. Aziz, Sentiawati Sentiawati, Deden Dewantara Eris, M. Bintang, P. Priyono, S. Siswanto
AbstractColletotrichum gloeosporioides, a pathogen of anthracnose disease, can significantly reduce the quality of mango (Mangifera indica) fruits. Chitosan as an antifungal agent can reduce fungal growth on post-harvest fruit of agricultural products. In its development, chitosan has been widely improved through its transformation into nanochitosan and its formulation with metals. One of the metals that has a large affinity and can be formulated with chitosan is copper (Cu). This study aimed to compare and determine the optimal concentration of chitosan, nanocithosan, and nanochitosan-Cu in suppressing the growth of C. gloeosporioides that cause decay on mango fruits. The synthesis of nanochitosan and nanochitosan-Cu was carried out by the ionic gelation method, while the characterization was performed by using particle size analyzer (PSA). The antifungal activity assay was conducted through the poisoning method by mixing a 500, 750, and 1000 ppm of chitosan, nanochitosan and nanochitosan-Cu into the growth media of C. gloeosporioides. The results of PSA analysis showed that chitosan, nanochitosan, and nanochitosan-Cu had an average size of 606.5, 386.8 and 254.1 nm, respectively. The formulation of chitosan into nanochitosan and nanochitosan-Cu was able to inhibit C. gloeosporioides with the inhibition percentages of chitosan, nanochitosan, and nanochitosan-Cu 35%, 70% and 100% in 750 ppm (0.075%, w/v), respectively.[Keywords: Ionic gelation, poisoning food, copper]AbstrakSerangan cendawan penyebab antraknosa seperti Colletotrichum gloeosporioides dapat menurunkan kualitas buah mangga (Mangifera indica) secara signifikan. Kitosan sebagai agensia antifungi mampu menekan pertumbuhan cendawan pada buah pasca panen hasil pertanian. Pada perkembangannya, kitosan telah banyak dikembangkan baik melalui transformasi menjadi nanokitosan maupun formulasinya dengan logam. Salah satu logam yang memiliki afinitas besar dan dapat diformulasikan dengan kitosan adalah tembaga (Cu). Tujuan dari penelitian ini adalah untuk membandingkan dan menentukan konsentrasi optimal dari kitosan, nanokitosan, dan nanokitosan-Cu dalam menekan pertumbuhan C. gloeosporioides yang menyebabkan pembusukan pada buah mangga. Sintesis nanokitosan dan nanokitosan-Cu dilakukan dengan metode gelasi ionik yang dikarakterisasi menggunakan particle size analyzer (PSA). Uji aktivitas antifungi dilakukan dengan metode peracunan agar dengan mencampurkan kitosan, nanokitosan, dan nanokitosan-Cu pada konsentrasi 500, 750, dan 1000 ppm pada media tumbuh isolat C. gloeosporioides. Hasil analisis PSA menunjukkan bahwa kitosan, nanokitosan, dan nanokitosan-Cu memiliki ukuran masing-masing sebesar 606,5, 386,8 dan 254,1 nm. Selain itu, transformasi kitosan menjadi nanokitosan dan nanokitosan-Cu dapat meningkatkan aktifitas antifungi terhadap C. gloeosporioides dibuktikan dengan peningkatan persentase penghambatan kitosan, nanokitosan dan nanokitosan-Cu sebesar 35%, 70% dan 100% secara berturut-turu
摘要炭疽病病原菌gloeosporioides可显著降低芒果果实品质。壳聚糖作为一种抗真菌剂,可以抑制农产品采后果实中真菌的生长。在其发展过程中,壳聚糖通过向纳米壳聚糖的转化和与金属的配制得到了广泛的改进。铜(Cu)是一种具有较大亲和力并可与壳聚糖配制的金属。本研究旨在比较和确定壳聚糖、纳米壳聚糖和纳米壳聚糖- cu对芒果果实腐烂病原菌生长的抑制作用。采用离子凝胶法制备了纳米壳聚糖和纳米壳聚糖- cu,并用粒径分析仪(PSA)对其进行了表征。采用500、750和1000 ppm的壳聚糖、纳米壳聚糖和纳米壳聚糖- cu三种不同浓度的投毒法对黄孢霉的抑菌活性进行了测定。PSA分析结果表明,壳聚糖、纳米壳聚糖和纳米壳聚糖- cu的平均粒径分别为606.5、386.8和254.1 nm。在750 ppm (0.075%, w/v)条件下,壳聚糖的抑制率为35%,纳米壳聚糖的抑制率为70%,纳米壳聚糖- cu的抑制率为100%。【关键词】离子凝胶;食物中毒;铜【关键词】离子凝胶;Kitosan sebagai agensia抗真菌mampu menekan pertumbuhan cendawan pada buah pasca panen hasil pertanian。在此基础上,建立了一种新型的纳米结构、纳米结构、纳米结构、纳米结构、纳米结构和纳米结构。Salah satu logam yang memiliki afinitas besar dan dapat diformulasikan dengan kitosan adalah tembaga (Cu)。Tujuan dari penelitian ini adalah untuk membandingkan dan menentukan konsentrasi optimal dari kitosan, nanokitosan, dan nanokitosan- cu dalam menekan pertumbuhan C. gloeosporioides yang menyebabkan pembusukan pada buah mangga。纳米核聚糖和纳米核聚糖- cu二拉库坎登干法,格拉库库库坎粒径分析仪(PSA)。在500ppm、750ppm、1000ppm的培养液中分离分离出gloeosporioides。Hasil分析PSA menunjukkan bahwa kitosan, nanokitosan, dan nanokitosan- cu memiliki ukuran masing-masing sebesar 606,5,386,8 dan 254,1 nm。Selain itu, transformasi kitosan menjadi纳米核聚糖和纳米核聚糖- cu dapat meningkatkan aktifitas抗真菌terhadap C. gloeosporioides dibuktikan dengan peningkatan persase penghambatan kitosan,纳米核聚糖和纳米核聚糖- cu sebesar 35%, 70%和100% secara berturut-turut pada konsentrasi 750 ppm (0.075%, b/v)。[Kata kunci: Gelasi ionik, peracunan agar, tembaga]
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引用次数: 0
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