Pub Date : 2024-07-09DOI: 10.31631/2073-3046-2024-23-3-27-37
A. S. Pimenova, N. Gadua, I. Y. Andrievskaya, O. Borisova, M. S. Petrova, A. Borisova, S. S. Afanas'ev, I. Podoprigora, M. S. Afanas'ev, T. I. Moskvina, G. V. Vorob'eva, I. M. Degtyareva, O. V. Timirkina, S. A. Luk'yanceva, T. N. Trigorlova
Relevance. Antibacterial drugs are widely used to treat and prevent infections of the upper and lower respiratory tract. The large-scale and unjustified use of antimicrobials to treat these infections has led to the emergence of resistance in most pathogens. The aim. To study antimicrobial susceptibility testing to erythromycin and azithromycin of strains of B. pertussis isolated in Russia. Materials & Methods. The research included 165 strains of B. pertussis isolated in January 2014 to June 2020. Antimicrobial susceptibility to erythromycin and azithromycin was determined by disk diffusion method and MIC test (HiMedia Laboratories Pvt. Limited, India). The A2047G mutation in the 23S rRNA gene was detected by PCR and subsequent sequencing. Results. Disk diffusion zone diameters for erythromycin in the studied strains ranged from 25 to 62 mm (median 44 mm) and disk diffusion zone diameters for azithromycin ranged from 22 to 80 mm (median 50 mm). Isolates with growth inhibition of more than 42 mm in diameter after 7 days of incubation were considered as susceptible. Among the studied strains, 57 (34.5%) were resistant to erythromycin and 23 (13.9%) to azithromycin. Then, MIC of erythromycin and MIC of azithromycin, respectively, were determined for these 57 and 23 strains using the MIC test. The comparison group included 79 isolates that were classified as sensitive to erythromycin (n = 31) and azithromycin (n=48) according to the results of the previous study. A MIC value of 0.12 μg/ml was considered as the cut-off for susceptible strains. All isolates were fully susceptible to erythromycin (MIC ≤ 0.01 μg/ml, median MIC 0.001 μg/ml) and azithromycin (MIC ≤ 0.01 μg/ml, median MIC 0.0001 μg/ml). An A-to-G mutation was not found at position 2047 in the 23S rRNA gene in 80 isolates that had a diameter of growth inhibition zone less than 42 mm. Conclusion. This study demonstrates no significant decrease in the susceptibility to erythromycin and azithromycin among B. pertussis strains isolated in Russia in 2014–2020. The studied B. pertussis strains exhibit a homozygous phenotype for macrolide resistance.
{"title":"Antimicrobial Susceptibility Testing to Erythromycin and Azithromycin of Clinical Isolates of Bordetella pertussis Circulating in Russia","authors":"A. S. Pimenova, N. Gadua, I. Y. Andrievskaya, O. Borisova, M. S. Petrova, A. Borisova, S. S. Afanas'ev, I. Podoprigora, M. S. Afanas'ev, T. I. Moskvina, G. V. Vorob'eva, I. M. Degtyareva, O. V. Timirkina, S. A. Luk'yanceva, T. N. Trigorlova","doi":"10.31631/2073-3046-2024-23-3-27-37","DOIUrl":"https://doi.org/10.31631/2073-3046-2024-23-3-27-37","url":null,"abstract":"Relevance. Antibacterial drugs are widely used to treat and prevent infections of the upper and lower respiratory tract. The large-scale and unjustified use of antimicrobials to treat these infections has led to the emergence of resistance in most pathogens. The aim. To study antimicrobial susceptibility testing to erythromycin and azithromycin of strains of B. pertussis isolated in Russia. Materials & Methods. The research included 165 strains of B. pertussis isolated in January 2014 to June 2020. Antimicrobial susceptibility to erythromycin and azithromycin was determined by disk diffusion method and MIC test (HiMedia Laboratories Pvt. Limited, India). The A2047G mutation in the 23S rRNA gene was detected by PCR and subsequent sequencing. Results. Disk diffusion zone diameters for erythromycin in the studied strains ranged from 25 to 62 mm (median 44 mm) and disk diffusion zone diameters for azithromycin ranged from 22 to 80 mm (median 50 mm). Isolates with growth inhibition of more than 42 mm in diameter after 7 days of incubation were considered as susceptible. Among the studied strains, 57 (34.5%) were resistant to erythromycin and 23 (13.9%) to azithromycin. Then, MIC of erythromycin and MIC of azithromycin, respectively, were determined for these 57 and 23 strains using the MIC test. The comparison group included 79 isolates that were classified as sensitive to erythromycin (n = 31) and azithromycin (n=48) according to the results of the previous study. A MIC value of 0.12 μg/ml was considered as the cut-off for susceptible strains. All isolates were fully susceptible to erythromycin (MIC ≤ 0.01 μg/ml, median MIC 0.001 μg/ml) and azithromycin (MIC ≤ 0.01 μg/ml, median MIC 0.0001 μg/ml). An A-to-G mutation was not found at position 2047 in the 23S rRNA gene in 80 isolates that had a diameter of growth inhibition zone less than 42 mm. Conclusion. This study demonstrates no significant decrease in the susceptibility to erythromycin and azithromycin among B. pertussis strains isolated in Russia in 2014–2020. The studied B. pertussis strains exhibit a homozygous phenotype for macrolide resistance.","PeriodicalId":11736,"journal":{"name":"Epidemiology and Vaccinal Prevention","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-07-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141665427","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-09DOI: 10.31631/2073-3046-2024-23-3-38-46
L. Barkinkhoeva, N. T. Turaeva, O. V. Tsvirkun, A. Gerasimova
Relevance. Serological monitoring of the state of the population's immunity to the rubella virus is one of the key elements of epidemiological surveillance of the infection, which makes it possible to assess the effectiveness of vaccine prevention, including the level of protection of the population from this infection. This article presents a comprehensive analysis of the results of this event in Russia for the period from 2015 to 2022 in individuals vaccinated against this infection, based on data from reports from regional centers and existing statistical models. The aim. To carry out a comprehensive analysis of data on serological monitoring of immunity among indicator groups of the population to rubella virus in the Russian Federation for the period from 2015 to 2022, taking into account the incidence and peculiarities of immunization tactics. Materials and Methods. Serological monitoring was carried out using standardized test systems and techniques, which ensured comparability of data throughout the entire study period (2015-2022). The contingent for the examination was selected with documentary confirmation of the fact of vaccination in the age groups 3–4 years, 9–10, 15–17, 25–29, 30–35 years. Only persons aged 40 years and older were examined without taking into account the vaccination history Results and Discussion. The conducted study confirmed a sufficient, stable level of immunity to the rubella virus in most age groups and regions of the country, which indicates the effectiveness of vaccination and the preservation (stabilization) of the infection elimination process. The slight increase in the average proportion of seronegatives among adults 30–35 and 40 years and older, revealed in the analysis, compared with other groups, requires further observation and clarification of the causes. Conclusions. The study confirmed the high level of immunity to rubella virus among the population of the Russian Federation, which indicates the effectiveness of the current program of vaccination against rubella infection and the infection elimination program. However, groups of the population have been identified, among which there is a slight decrease in the level of immunity, which requires additional attention from health authorities to maintain a stable rubella elimination status in the country. The results of the study will be used as additions to national and regional strategies aimed at maintaining the rubella elimination status.
{"title":"The State of Immunity of the Population of the Russian Federation to Rubella during the Elimination of Infection","authors":"L. Barkinkhoeva, N. T. Turaeva, O. V. Tsvirkun, A. Gerasimova","doi":"10.31631/2073-3046-2024-23-3-38-46","DOIUrl":"https://doi.org/10.31631/2073-3046-2024-23-3-38-46","url":null,"abstract":"Relevance. Serological monitoring of the state of the population's immunity to the rubella virus is one of the key elements of epidemiological surveillance of the infection, which makes it possible to assess the effectiveness of vaccine prevention, including the level of protection of the population from this infection. This article presents a comprehensive analysis of the results of this event in Russia for the period from 2015 to 2022 in individuals vaccinated against this infection, based on data from reports from regional centers and existing statistical models. The aim. To carry out a comprehensive analysis of data on serological monitoring of immunity among indicator groups of the population to rubella virus in the Russian Federation for the period from 2015 to 2022, taking into account the incidence and peculiarities of immunization tactics. Materials and Methods. Serological monitoring was carried out using standardized test systems and techniques, which ensured comparability of data throughout the entire study period (2015-2022). The contingent for the examination was selected with documentary confirmation of the fact of vaccination in the age groups 3–4 years, 9–10, 15–17, 25–29, 30–35 years. Only persons aged 40 years and older were examined without taking into account the vaccination history Results and Discussion. The conducted study confirmed a sufficient, stable level of immunity to the rubella virus in most age groups and regions of the country, which indicates the effectiveness of vaccination and the preservation (stabilization) of the infection elimination process. The slight increase in the average proportion of seronegatives among adults 30–35 and 40 years and older, revealed in the analysis, compared with other groups, requires further observation and clarification of the causes. Conclusions. The study confirmed the high level of immunity to rubella virus among the population of the Russian Federation, which indicates the effectiveness of the current program of vaccination against rubella infection and the infection elimination program. However, groups of the population have been identified, among which there is a slight decrease in the level of immunity, which requires additional attention from health authorities to maintain a stable rubella elimination status in the country. The results of the study will be used as additions to national and regional strategies aimed at maintaining the rubella elimination status.","PeriodicalId":11736,"journal":{"name":"Epidemiology and Vaccinal Prevention","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-07-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141663740","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-08DOI: 10.31631/2073-3046-2024-23-3-4-18
A. I. Blokh, N. Pen’evskaya, N. Rudakov, S. Shtrek, S. Shpynov, O. F. Egorova, Kh. A. Manokhina, D. Saveliev, S. Y. Krasotkina
Relevance. Altai Krai (AK) is one of the least prosperous subjects of the Russian Federation in terms of the incidence of acute respiratory infections (ARI). Results of studying long-term and intra-annual dynamics of the incidence of ARI and community-acquired pneumonia (CAP) in various population groups of the AK in 2011–2021 led to a conclusion about possible connection between the characteristics of the epidemic process of ARI and environmental factors, primarily air pollution, as well as the widespread distribution of natural and atropurgic foci of tick-borne transmissible and zoonotic infections in the territory of the AK, along with the problems of diagnostics. Aim. Assessment of the possible influence of environmental factors on the formation of a high level of registered incidence of ARI in the Altai Territory, as well as diagnostics of some natural focal and zoonotic infections with fever and respiratory symptoms. Materials and methods. A retrospective epidemiological study was conducted based on annual and monthly official statistical reporting during 2011–2021 about the morbidity of the population, demographic and environmental features of the territory of the AK for each of the municipalities (MU), the average long-term incidence rates of ARI, VBP, tuberculosis, Siberian tick typhus (STT), ixodid tick-borne borreliosis, tick-borne viral encephalitis were calculated; appeals of the population regarding tick bites; population density and annual average sulfur dioxide (SO2) emissions. Pearson correlation coefficient was used to assess the strength of the relationship between the analyzed indicators; and seasonality coefficients and the method of trend-seasonal decomposition were used to assess the intra-annual dynamics of the incidence of ARI and CAP (for the period 2011-2019). To study seroprevalence of antibodies to C. burnetii, R. sibirica and SARS-CoV-2 in febrile patients with symptoms of ARI blood samples were collected in October 2022 from ten rural districts of the AK. Results and discussion. It was established that there was a significant direct correlation between the incidence of ARI and the amount of SO2 emissions into the atmosphere (r = 0.61, p < 0.001), as well as between the incidence of ARI and population density (r = 0.53, p < 0.001). The largest share (69%) of the total number of ARI cases in the Altai Territory in 2011–2021 was attributed to the cities of Barnaul, Biysk, Rubtsovsk, Zarinsk and Novoaltaisk, which are characterized by maximum SO2 emissions and population density. An additional contribution (8% total) to the incidence of ARI in the Altai Territory was attributed to 7 rural areas with the highest levels of SO2 emissions. Regardless of the ranking for the incidence of ARI and CAP, in 9 out of 10 areas selected for the study, patients had both anamnestic and diagnostic titers of antibodies to C. burnetii and/or R. sibirica. At the same time, coxiellosis cases in these areas were not registered for 12 years,
{"title":"Analysis of the Causes and Conditions for the Formation of a High Incidence of Acute Respiratory Infections in the Population of the Altai Krai (Part 2. Environmental factors, diagnosis of coxiellosis and tickborne rickettsiosis)","authors":"A. I. Blokh, N. Pen’evskaya, N. Rudakov, S. Shtrek, S. Shpynov, O. F. Egorova, Kh. A. Manokhina, D. Saveliev, S. Y. Krasotkina","doi":"10.31631/2073-3046-2024-23-3-4-18","DOIUrl":"https://doi.org/10.31631/2073-3046-2024-23-3-4-18","url":null,"abstract":"Relevance. Altai Krai (AK) is one of the least prosperous subjects of the Russian Federation in terms of the incidence of acute respiratory infections (ARI). Results of studying long-term and intra-annual dynamics of the incidence of ARI and community-acquired pneumonia (CAP) in various population groups of the AK in 2011–2021 led to a conclusion about possible connection between the characteristics of the epidemic process of ARI and environmental factors, primarily air pollution, as well as the widespread distribution of natural and atropurgic foci of tick-borne transmissible and zoonotic infections in the territory of the AK, along with the problems of diagnostics. Aim. Assessment of the possible influence of environmental factors on the formation of a high level of registered incidence of ARI in the Altai Territory, as well as diagnostics of some natural focal and zoonotic infections with fever and respiratory symptoms. Materials and methods. A retrospective epidemiological study was conducted based on annual and monthly official statistical reporting during 2011–2021 about the morbidity of the population, demographic and environmental features of the territory of the AK for each of the municipalities (MU), the average long-term incidence rates of ARI, VBP, tuberculosis, Siberian tick typhus (STT), ixodid tick-borne borreliosis, tick-borne viral encephalitis were calculated; appeals of the population regarding tick bites; population density and annual average sulfur dioxide (SO2) emissions. Pearson correlation coefficient was used to assess the strength of the relationship between the analyzed indicators; and seasonality coefficients and the method of trend-seasonal decomposition were used to assess the intra-annual dynamics of the incidence of ARI and CAP (for the period 2011-2019). To study seroprevalence of antibodies to C. burnetii, R. sibirica and SARS-CoV-2 in febrile patients with symptoms of ARI blood samples were collected in October 2022 from ten rural districts of the AK. Results and discussion. It was established that there was a significant direct correlation between the incidence of ARI and the amount of SO2 emissions into the atmosphere (r = 0.61, p < 0.001), as well as between the incidence of ARI and population density (r = 0.53, p < 0.001). The largest share (69%) of the total number of ARI cases in the Altai Territory in 2011–2021 was attributed to the cities of Barnaul, Biysk, Rubtsovsk, Zarinsk and Novoaltaisk, which are characterized by maximum SO2 emissions and population density. An additional contribution (8% total) to the incidence of ARI in the Altai Territory was attributed to 7 rural areas with the highest levels of SO2 emissions. Regardless of the ranking for the incidence of ARI and CAP, in 9 out of 10 areas selected for the study, patients had both anamnestic and diagnostic titers of antibodies to C. burnetii and/or R. sibirica. At the same time, coxiellosis cases in these areas were not registered for 12 years,","PeriodicalId":11736,"journal":{"name":"Epidemiology and Vaccinal Prevention","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-07-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141666741","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-03DOI: 10.31631/2073-3046-2024-23-2-25-35
A. A. Abramov
Relevance. Urogenital chlamydia is one of the most common sexually transmitted infections. Chlamydia often presents with minimal or no symptoms. However, it can be a major cause of pelvic inflammatory disease (PID), infertility, and ectopic pregnancy in women, as well as epididymitis, orchitis, and infertility in men. Aim. To study the territorial patterns of incidence of urogenital chlamydia, gonorrhea, and their associated complications in the Russian Federation in 2011 to 2019. Materials and methods. Official statistics on the incidence of urogenital chlamydia, gonorrhea, PID, female and male infertility in the Russian Federation were analyzed. Statistical analysis, graphing, table creation, data visualization, and research results analysis were conducted using Microsoft Excel 2010 and IBM SPSS Statistics 22 software. GIS mapping was performed using the GIS «Axioma». Results and discussion. From 2011 to 2019, the Russian Federation observed a decrease in the incidence of urogenital chlamydia, gonorrhea, and PID, while there was an increase in the incidence of male and female infertility. The geographical distribution remained stable, with areas characterized by consistently low and high incidence rates. A correlation was found between the incidence of urogenital chlamydia, gonorrhea, and their complications. The association between gonorrhea and PID was found to be more significant than the association between chlamydia and PID, possibly due to the higher risk of complications associated with gonorrhea. However, no correlation was found between gonorrhea and infertility, possibly because this complication manifests with a time delay and has multifactorial causes. Conclusions. Based on the presented data, it can be concluded that the incidence of urogenital chlamydia and gonorrhea affects the frequency of male and female infertility. Therefore, the implementation of screening examinations for sexually active individuals of reproductive age using appropriate laboratory diagnostic methods, along with the development of preventive measures for sexually transmitted infections, including urogenital chlamydia, is justified and should be widely practiced.
{"title":"The Territorial Distribution of Incidence with Urogenital Chlamydia, Gonorrhea, and their Associated Complications in the Russian Federation","authors":"A. A. Abramov","doi":"10.31631/2073-3046-2024-23-2-25-35","DOIUrl":"https://doi.org/10.31631/2073-3046-2024-23-2-25-35","url":null,"abstract":"Relevance. Urogenital chlamydia is one of the most common sexually transmitted infections. Chlamydia often presents with minimal or no symptoms. However, it can be a major cause of pelvic inflammatory disease (PID), infertility, and ectopic pregnancy in women, as well as epididymitis, orchitis, and infertility in men. Aim. To study the territorial patterns of incidence of urogenital chlamydia, gonorrhea, and their associated complications in the Russian Federation in 2011 to 2019. Materials and methods. Official statistics on the incidence of urogenital chlamydia, gonorrhea, PID, female and male infertility in the Russian Federation were analyzed. Statistical analysis, graphing, table creation, data visualization, and research results analysis were conducted using Microsoft Excel 2010 and IBM SPSS Statistics 22 software. GIS mapping was performed using the GIS «Axioma». Results and discussion. From 2011 to 2019, the Russian Federation observed a decrease in the incidence of urogenital chlamydia, gonorrhea, and PID, while there was an increase in the incidence of male and female infertility. The geographical distribution remained stable, with areas characterized by consistently low and high incidence rates. A correlation was found between the incidence of urogenital chlamydia, gonorrhea, and their complications. The association between gonorrhea and PID was found to be more significant than the association between chlamydia and PID, possibly due to the higher risk of complications associated with gonorrhea. However, no correlation was found between gonorrhea and infertility, possibly because this complication manifests with a time delay and has multifactorial causes. Conclusions. Based on the presented data, it can be concluded that the incidence of urogenital chlamydia and gonorrhea affects the frequency of male and female infertility. Therefore, the implementation of screening examinations for sexually active individuals of reproductive age using appropriate laboratory diagnostic methods, along with the development of preventive measures for sexually transmitted infections, including urogenital chlamydia, is justified and should be widely practiced.","PeriodicalId":11736,"journal":{"name":"Epidemiology and Vaccinal Prevention","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141016900","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-03DOI: 10.31631/2073-3046-2024-23-2-50-60
V. V. Tatarnikova, V. I. Dubrovina, N. O. Kiseleva, V. A. Vishnyakov, D. D. Bryukhova, A. B. Pyatidesyatnikova, A. N. Bondaryuk, S. V. Balakhonov
Relevance. The new coronavirus infection (COVID-19) is still a public health problem and a threat to socio-economic well-being. Most studies have focused predominantly on humoral immunity, and there are no data on the cellular composition of blood in dynamics. Aim. To study the dynamics of changes in blood cellular composition depending on the type of immunity formed (natural, hybrid, breakthrough, postvaccinal) to SARS-CoV-2 virus. Materials and Methods. A total of 130 volunteers participated in the study. Immunophenotyping of peripheral blood leukocytes using flow cytometry was performed. The presence of specific IgG antibodies to N-protein SARS-CoV-2, total IgA and cytokines (IL-4, IL-10, IFN-γ, TNF-α) was assessed in serum by ELISA. Results and Discussion. A statistically significant increase in BL was recorded in volunteers with hybrid immunity 1 month (14,0% (12,3–16,4%)) after vaccination compared to healthy volunteers (9,1% (6,4–10,2%), p = 0,0007) and people with primary COVID-19 infection (10,2% (8,3–12,1%), p = 0,0134). In volunteers with natural and hybrid immunity, as well as in revaccinated people, an increase in B1-cells (CD3-CD19+CD5+CD27-) was observed during 3–9 months of observation. It is shown that the increase of B-lymphocytes with «switched» class of synthesized antibodies was detected in people with breakthrough immunity. Increased levels of T-lymphocytes expressing HLA-DR were recorded in all individuals during 6–9 months of follow-up. Volunteers with breakthrough immunity showed a significant increase in the positivity index when assessing the presence of specific IgG class antibodies to the coronavirus N-protein compared with volunteers with natural and hybrid immunity. Conclusions. Vaccination promotes protective immunity sufficient for timely activation of memory T- and B-cells in breakthrough immunity and maintenance of immunologic efficacy in hybrid immunity against COVID-19. The results help to assess the strain of innate and adaptive immunity in novel coronavirus infection and to fill gaps in the understanding of immunopathogenesis in COVID-19.
相关性。新型冠状病毒感染（COVID-19）仍是一个公共卫生问题，也是对社会经济福祉的威胁。大多数研究主要集中在体液免疫方面，没有关于动态血液细胞成分的数据。研究目的研究血液细胞成分的动态变化取决于对 SARS-CoV-2 病毒形成的免疫类型（天然免疫、混合免疫、突破免疫、疫苗接种后免疫）。材料和方法。共有 130 名志愿者参与研究。使用流式细胞仪对外周血白细胞进行免疫分型。通过 ELISA 方法评估血清中是否存在 SARS-CoV-2 N 蛋白特异性 IgG 抗体、总 IgA 和细胞因子（IL-4、IL-10、IFN-γ、TNF-α）。结果与讨论与健康志愿者（9.1% (6.4-10.2%)，p = 0.0007）和 COVID-19 原发感染者（10.2% (8.3-12.1%)，p = 0.0134）相比，混合免疫志愿者在接种疫苗 1 个月后（14.0% (12.3-16.4%)）BL 明显增加。在具有天然免疫和混合免疫的志愿者中，以及在重新接种疫苗的人群中，在3-9个月的观察期间观察到了B1细胞（CD3-CD19+CD5+CD27-）的增加。研究表明，在获得突破性免疫力的人群中，检测到合成抗体 "转换 "类的 B 淋巴细胞增多。在 6-9 个月的随访中，所有患者体内表达 HLA-DR 的 T 淋巴细胞水平都有所上升。在评估冠状病毒 N 蛋白特异性 IgG 类抗体时，与自然免疫和混合免疫的志愿者相比，突破性免疫志愿者的阳性指数显著增加。结论是接种疫苗可促进保护性免疫，足以在突破性免疫中及时激活记忆T细胞和B细胞，并在混合免疫中维持对COVID-19的免疫效力。这些结果有助于评估新型冠状病毒感染中先天性免疫和适应性免疫的应变，并填补对 COVID-19 免疫发病机制认识的空白。
{"title":"Effect of Immunity to SARS-CoV-2 Virus on Blood Cellular Composition","authors":"V. V. Tatarnikova, V. I. Dubrovina, N. O. Kiseleva, V. A. Vishnyakov, D. D. Bryukhova, A. B. Pyatidesyatnikova, A. N. Bondaryuk, S. V. Balakhonov","doi":"10.31631/2073-3046-2024-23-2-50-60","DOIUrl":"https://doi.org/10.31631/2073-3046-2024-23-2-50-60","url":null,"abstract":"Relevance. The new coronavirus infection (COVID-19) is still a public health problem and a threat to socio-economic well-being. Most studies have focused predominantly on humoral immunity, and there are no data on the cellular composition of blood in dynamics. Aim. To study the dynamics of changes in blood cellular composition depending on the type of immunity formed (natural, hybrid, breakthrough, postvaccinal) to SARS-CoV-2 virus. Materials and Methods. A total of 130 volunteers participated in the study. Immunophenotyping of peripheral blood leukocytes using flow cytometry was performed. The presence of specific IgG antibodies to N-protein SARS-CoV-2, total IgA and cytokines (IL-4, IL-10, IFN-γ, TNF-α) was assessed in serum by ELISA. Results and Discussion. A statistically significant increase in BL was recorded in volunteers with hybrid immunity 1 month (14,0% (12,3–16,4%)) after vaccination compared to healthy volunteers (9,1% (6,4–10,2%), p = 0,0007) and people with primary COVID-19 infection (10,2% (8,3–12,1%), p = 0,0134). In volunteers with natural and hybrid immunity, as well as in revaccinated people, an increase in B1-cells (CD3-CD19+CD5+CD27-) was observed during 3–9 months of observation. It is shown that the increase of B-lymphocytes with «switched» class of synthesized antibodies was detected in people with breakthrough immunity. Increased levels of T-lymphocytes expressing HLA-DR were recorded in all individuals during 6–9 months of follow-up. Volunteers with breakthrough immunity showed a significant increase in the positivity index when assessing the presence of specific IgG class antibodies to the coronavirus N-protein compared with volunteers with natural and hybrid immunity. Conclusions. Vaccination promotes protective immunity sufficient for timely activation of memory T- and B-cells in breakthrough immunity and maintenance of immunologic efficacy in hybrid immunity against COVID-19. The results help to assess the strain of innate and adaptive immunity in novel coronavirus infection and to fill gaps in the understanding of immunopathogenesis in COVID-19.","PeriodicalId":11736,"journal":{"name":"Epidemiology and Vaccinal Prevention","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141017411","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-03DOI: 10.31631/2073-3046-2024-23-2-78-86
S. Agliullina, K. A. Lushanina, G. Khasanova, A. Shulaev, D. Plotnikov
Relevance. Myopia in students can lead to various problems with vision and affect quality of life and academic achievement. Aim. To analyze factors associated with the presence of myopia among medical students to develop effective methods of prevention of this disease. Materials and methods. A non-anonymous questionnaire was conducted on myopia among medical students of the first to sixth year. The questionnaire was developed based on the analysis of published data and included the demographic information, questions concerning the medical history, family history and lifestyle. The questionnaire data were supplemented with information from recording medical forms No. 025 «Medical records of patients receiving outpatient care». The data of 323 medical students were analyzed. Descriptive and logistic regression analyses were performed. Adjusted odds ratio (aOR) and 95% confidence intervals (95% CI) for each factor were calculated. Results. The median age of students was 21 years [Q1–Q3 = 19–23], min age = 17 years, max = 31 years. According to the ophthalmologist's examination, 68.7% of students had myopia (95% CI 63.4–73.7). Healthy weight and underweight were associated with the presence of myopia compared to those who are overweight or obese: aOR 2.433 (95% CI 1.096–5.403, p = 0.029) and aOR 2.774 (95% CI 1.231–6.253, p = 0.014), respectively. The presence of 8-hour sleep is associated with a decrease in the chances of having myopia by 2,321 times (aOR 0.431; 95% CI 0.190–0.979; p = 0.044). A large number of steps per day was associated with the absence of myopia. Those who walk 10,000 steps or more per day are 7.46 times less likely to have myopia than those who walk less than 2,000 steps per day. Conclusion. We report a high prevalence of myopia in medical students. The findings suggest that health promotion, including adequate sleep and regular physical activity, can be an effective strategy to prevent the occurrence or progression of myopia and other eye complications.
{"title":"Epidemiological Assessment of Factors Associated with Myopia in Medical Students","authors":"S. Agliullina, K. A. Lushanina, G. Khasanova, A. Shulaev, D. Plotnikov","doi":"10.31631/2073-3046-2024-23-2-78-86","DOIUrl":"https://doi.org/10.31631/2073-3046-2024-23-2-78-86","url":null,"abstract":"Relevance. Myopia in students can lead to various problems with vision and affect quality of life and academic achievement. Aim. To analyze factors associated with the presence of myopia among medical students to develop effective methods of prevention of this disease. Materials and methods. A non-anonymous questionnaire was conducted on myopia among medical students of the first to sixth year. The questionnaire was developed based on the analysis of published data and included the demographic information, questions concerning the medical history, family history and lifestyle. The questionnaire data were supplemented with information from recording medical forms No. 025 «Medical records of patients receiving outpatient care». The data of 323 medical students were analyzed. Descriptive and logistic regression analyses were performed. Adjusted odds ratio (aOR) and 95% confidence intervals (95% CI) for each factor were calculated. Results. The median age of students was 21 years [Q1–Q3 = 19–23], min age = 17 years, max = 31 years. According to the ophthalmologist's examination, 68.7% of students had myopia (95% CI 63.4–73.7). Healthy weight and underweight were associated with the presence of myopia compared to those who are overweight or obese: aOR 2.433 (95% CI 1.096–5.403, p = 0.029) and aOR 2.774 (95% CI 1.231–6.253, p = 0.014), respectively. The presence of 8-hour sleep is associated with a decrease in the chances of having myopia by 2,321 times (aOR 0.431; 95% CI 0.190–0.979; p = 0.044). A large number of steps per day was associated with the absence of myopia. Those who walk 10,000 steps or more per day are 7.46 times less likely to have myopia than those who walk less than 2,000 steps per day. Conclusion. We report a high prevalence of myopia in medical students. The findings suggest that health promotion, including adequate sleep and regular physical activity, can be an effective strategy to prevent the occurrence or progression of myopia and other eye complications.","PeriodicalId":11736,"journal":{"name":"Epidemiology and Vaccinal Prevention","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141014829","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-03DOI: 10.31631/2073-3046-2024-23-2-61-70
A. V. Hilov, N. Saperkin, O. Kovalishena, N. A. Sadykova, V. V. Perekatova, N. V. Perekhozheva, D. Kurakina, M. Kirillin
Relevance. To investigate the characteristics of the COVID-19 pandemic and introduce timely and effective measures, there is a need for models that can predict the impact of various restrictive actions or characteristics of disease itself on COVID-19 spread dynamics. Employing agent-based models can be attractive because they take into consideration different population characteristics (e.g., age distribution and social activity) and restrictive measures, laboratory testing, etc., as well as random factors that are usually omitted in traditional modifications of the SIR-like dynamic models. Aim. Improvement of the previously proposed agent-based model [23,24] for modeling the spread of COVID-19 in various regions of the Russian Federation. At this stage, six waves of the spread of COVID-19 have been modeled in the Nizhny Novgorod region as a whole region, as well as in its individual cities, taking into account restrictive measures and vaccination of the population. Materials and Methods. In this paper we extend a recently proposed agent-based model for Monte Carlo-based numerical simulation of the spread of COVID-19 with consideration of testing and vaccination strategies. Analysis is performed in MATLAB/ GNU Octave. Results. Developed multicentral model allows for more accurate simulation of the epidemic dynamics within one region, when a patient zero usually arrives at a regional center, after which the distribution chains capture the periphery of the region due to pendulum migration. Furthermore, we demonstrate the application of the developed model to analyze the epidemic spread in the Nizhny Novgorod region of Russian Federation. The simulated dynamics of the daily newly detected cases and COVID-19-related deaths was in good agreement with the official statistical data both for the region as whole and different periphery cities. Conclusions. The results obtained with developed model suggest that the actual number of COVID-19 cases might be 1.5–3.0 times higher than the number of reported cases. The developed model also took into account the effect of vaccination. It is shown that with the same modeling parameters, but without vaccination, the third and fourth waves of the epidemic would be united into one characterized by a huge rise in the morbidity rates and the occurrence of natural individual immunity with the absence of further pandemic waves. Nonetheless, the number of deaths would exceed the real one by about 9–10 times.
{"title":"Multicentral Agent-Based Model of Six Epidemic Waves of COVID-19 in the Nizhny Novgorod Region of Russian Federation","authors":"A. V. Hilov, N. Saperkin, O. Kovalishena, N. A. Sadykova, V. V. Perekatova, N. V. Perekhozheva, D. Kurakina, M. Kirillin","doi":"10.31631/2073-3046-2024-23-2-61-70","DOIUrl":"https://doi.org/10.31631/2073-3046-2024-23-2-61-70","url":null,"abstract":"Relevance. To investigate the characteristics of the COVID-19 pandemic and introduce timely and effective measures, there is a need for models that can predict the impact of various restrictive actions or characteristics of disease itself on COVID-19 spread dynamics. Employing agent-based models can be attractive because they take into consideration different population characteristics (e.g., age distribution and social activity) and restrictive measures, laboratory testing, etc., as well as random factors that are usually omitted in traditional modifications of the SIR-like dynamic models. Aim. Improvement of the previously proposed agent-based model [23,24] for modeling the spread of COVID-19 in various regions of the Russian Federation. At this stage, six waves of the spread of COVID-19 have been modeled in the Nizhny Novgorod region as a whole region, as well as in its individual cities, taking into account restrictive measures and vaccination of the population. Materials and Methods. In this paper we extend a recently proposed agent-based model for Monte Carlo-based numerical simulation of the spread of COVID-19 with consideration of testing and vaccination strategies. Analysis is performed in MATLAB/ GNU Octave. Results. Developed multicentral model allows for more accurate simulation of the epidemic dynamics within one region, when a patient zero usually arrives at a regional center, after which the distribution chains capture the periphery of the region due to pendulum migration. Furthermore, we demonstrate the application of the developed model to analyze the epidemic spread in the Nizhny Novgorod region of Russian Federation. The simulated dynamics of the daily newly detected cases and COVID-19-related deaths was in good agreement with the official statistical data both for the region as whole and different periphery cities. Conclusions. The results obtained with developed model suggest that the actual number of COVID-19 cases might be 1.5–3.0 times higher than the number of reported cases. The developed model also took into account the effect of vaccination. It is shown that with the same modeling parameters, but without vaccination, the third and fourth waves of the epidemic would be united into one characterized by a huge rise in the morbidity rates and the occurrence of natural individual immunity with the absence of further pandemic waves. Nonetheless, the number of deaths would exceed the real one by about 9–10 times.","PeriodicalId":11736,"journal":{"name":"Epidemiology and Vaccinal Prevention","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141017091","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-03DOI: 10.31631/2073-3046-2024-23-2-94-101
N. P. Andreeva, S. R. Racic, S. Lezhenina, T. G. Denisova
The considerable success of vaccination against the new coronavirus infection, which has led to a decrease in morbidity and mortality in adults and children, requires the study of the problem of revaccination against SARS-CoV-2. The pathogenic properties of the virus and its unpredictable mutations continue to support an unfavorable epidemic situation in different regions of the world. Revaccination regimens against SARS-CoV-2 are being developed in different countries and populations based on epidemiological indications. The issue of introducing vaccination against a new coronavirus infection into national vaccination calendars for adults and children is debatable and requires further study.
{"title":"Revaccination against COVID-19: Current Status of the Problem","authors":"N. P. Andreeva, S. R. Racic, S. Lezhenina, T. G. Denisova","doi":"10.31631/2073-3046-2024-23-2-94-101","DOIUrl":"https://doi.org/10.31631/2073-3046-2024-23-2-94-101","url":null,"abstract":"The considerable success of vaccination against the new coronavirus infection, which has led to a decrease in morbidity and mortality in adults and children, requires the study of the problem of revaccination against SARS-CoV-2. The pathogenic properties of the virus and its unpredictable mutations continue to support an unfavorable epidemic situation in different regions of the world. Revaccination regimens against SARS-CoV-2 are being developed in different countries and populations based on epidemiological indications. The issue of introducing vaccination against a new coronavirus infection into national vaccination calendars for adults and children is debatable and requires further study.","PeriodicalId":11736,"journal":{"name":"Epidemiology and Vaccinal Prevention","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141017187","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-03DOI: 10.31631/2073-3046-2024-23-2-36-49
L. Karpova, M. Y. Pelikh, N. M. Popovtseva, T. P. Stolyarova, K. Volik, K. Stolyarov
Relevance. Surveillance of new genetic variants and manifestations of the epidemic process in SARS-CoV-2 is relevant for predicting the epidemiological situation and timely introduction of anti-epidemic measures. Aim. To evaluate changes in the intensity of the epidemic process during the long circulation of the «omicron» variant and its daughter genovariants. Materials and methods. The analysis of the computer database of the WHO National Center for morbidity, hospitalization and deaths from COVID-19 of the population as a whole and by age groups of 54 cities of the Russian Federation was carried out. Results. Since the appearance of COVID-19 in Russia in 2020, the maximum intensity was the V (winter–spring) wave of 2022. The intensity of the VI (autumn) and VII (winter–spring) waves was lower. In the VI wave, the incidence and mortality from COVID-19 of the population of the RF as a whole decreased by 2.5 and 6.5 times, St. Petersburg – by 2.6 and 29.7 times, and Moscow by 1.6 and 26.6 times. In the VII wave, compared with the VI wave, the decrease in morbidity was less. By age groups, the incidence decreased more among children aged 7–14 years (4.3 times in the VI wave) and less among children 0 –2 and people over 65 years (2.0 times), there was a tendency to increase the proportion of people over 65 years from 18% to 27%. The incidence rates of COVID-19 in the population as a whole and in age groups were higher in 4 FD (North-West, Far East, Siberia and the Center). In 2022, an interepidemic period was revealed for the first time in Russia, the duration of which was in megacities for 9 and FD – from 11 to 13 weeks. In the interepidemic period, the incidence was less than in the minimum VII (winter-spring) wave in the RF as a whole – by 4.6 times, in St. Petersburg – by 7.1 times and in Moscow – by 15 times. There were no deaths among children in the observed cities, and an increase in the total coefficient of mortality rate is associated with mortality among people over 65 years of age. Conclusion. The decrease in the intensity of the epidemicprocess in the VI and VII waves is caused by the prolonged circulation of omicron and its daughter genovarians.
{"title":"Coronavirus Infection Caused by the Omicron Variant and its Daughter Genovariants in Russia (2022–2023)","authors":"L. Karpova, M. Y. Pelikh, N. M. Popovtseva, T. P. Stolyarova, K. Volik, K. Stolyarov","doi":"10.31631/2073-3046-2024-23-2-36-49","DOIUrl":"https://doi.org/10.31631/2073-3046-2024-23-2-36-49","url":null,"abstract":"Relevance. Surveillance of new genetic variants and manifestations of the epidemic process in SARS-CoV-2 is relevant for predicting the epidemiological situation and timely introduction of anti-epidemic measures. Aim. To evaluate changes in the intensity of the epidemic process during the long circulation of the «omicron» variant and its daughter genovariants. Materials and methods. The analysis of the computer database of the WHO National Center for morbidity, hospitalization and deaths from COVID-19 of the population as a whole and by age groups of 54 cities of the Russian Federation was carried out. Results. Since the appearance of COVID-19 in Russia in 2020, the maximum intensity was the V (winter–spring) wave of 2022. The intensity of the VI (autumn) and VII (winter–spring) waves was lower. In the VI wave, the incidence and mortality from COVID-19 of the population of the RF as a whole decreased by 2.5 and 6.5 times, St. Petersburg – by 2.6 and 29.7 times, and Moscow by 1.6 and 26.6 times. In the VII wave, compared with the VI wave, the decrease in morbidity was less. By age groups, the incidence decreased more among children aged 7–14 years (4.3 times in the VI wave) and less among children 0 –2 and people over 65 years (2.0 times), there was a tendency to increase the proportion of people over 65 years from 18% to 27%. The incidence rates of COVID-19 in the population as a whole and in age groups were higher in 4 FD (North-West, Far East, Siberia and the Center). In 2022, an interepidemic period was revealed for the first time in Russia, the duration of which was in megacities for 9 and FD – from 11 to 13 weeks. In the interepidemic period, the incidence was less than in the minimum VII (winter-spring) wave in the RF as a whole – by 4.6 times, in St. Petersburg – by 7.1 times and in Moscow – by 15 times. There were no deaths among children in the observed cities, and an increase in the total coefficient of mortality rate is associated with mortality among people over 65 years of age. Conclusion. The decrease in the intensity of the epidemicprocess in the VI and VII waves is caused by the prolonged circulation of omicron and its daughter genovarians.","PeriodicalId":11736,"journal":{"name":"Epidemiology and Vaccinal Prevention","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141015779","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-03DOI: 10.31631/2073-3046-2024-23-2-114-123
N. Briko, I. V. Feldblyum
The article is dedicated to outlining the conceptual directions for the development of vaccination in the Russian Federation. The provisions of the concept are formulated based on the authors' years of research on vaccination issues and analysis of data from domestic and foreign scientific literature. The main provisions of the concept aim at strengthening the state policy in the field of vaccination, reconstructing and expanding enterprises for the production of domestic vaccines, developing and improving immunobiological medicinal products against current infections, refining the National Immunization Schedule and Vaccination Schedule according to epidemiological indications; further promoting the WHO's "lifelong immunization" strategy; developing regional immunization programs; implementing a risk-oriented approach in the development of immunization programs; developing a system for monitoring post-vaccination complications; implementing epidemiological surveillance of vaccination as a methodology for assessing the strategy and tactics of immunization in accordance with the epidemiological situation; ensuring commitment to vaccination among the population, healthcare workers, and legislative and executive authorities.
{"title":"National Concept of Development of Vaccine Prophylaxis in Russia","authors":"N. Briko, I. V. Feldblyum","doi":"10.31631/2073-3046-2024-23-2-114-123","DOIUrl":"https://doi.org/10.31631/2073-3046-2024-23-2-114-123","url":null,"abstract":"The article is dedicated to outlining the conceptual directions for the development of vaccination in the Russian Federation. The provisions of the concept are formulated based on the authors' years of research on vaccination issues and analysis of data from domestic and foreign scientific literature. The main provisions of the concept aim at strengthening the state policy in the field of vaccination, reconstructing and expanding enterprises for the production of domestic vaccines, developing and improving immunobiological medicinal products against current infections, refining the National Immunization Schedule and Vaccination Schedule according to epidemiological indications; further promoting the WHO's \"lifelong immunization\" strategy; developing regional immunization programs; implementing a risk-oriented approach in the development of immunization programs; developing a system for monitoring post-vaccination complications; implementing epidemiological surveillance of vaccination as a methodology for assessing the strategy and tactics of immunization in accordance with the epidemiological situation; ensuring commitment to vaccination among the population, healthcare workers, and legislative and executive authorities.","PeriodicalId":11736,"journal":{"name":"Epidemiology and Vaccinal Prevention","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141016246","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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