Yohei Nishikawa, Masahito Hosokawa, M. Kogawa, H. Takeyama
{"title":"Single-cell genomics of environmental bacteria-Development of microfluidic droplet-based whole genome sequencing method and its application to environmental samples","authors":"Yohei Nishikawa, Masahito Hosokawa, M. Kogawa, H. Takeyama","doi":"10.4109/JSLAB.31.17","DOIUrl":"https://doi.org/10.4109/JSLAB.31.17","url":null,"abstract":"","PeriodicalId":117947,"journal":{"name":"Japanese Journal of Lactic Acid Bacteria","volume":"46 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2020-03-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"126934726","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Because of the safety and functionality, lactic acid bacteria have been intensively studied for purposes of industrial application, especially in probiotics field. Taxonomy and identification of the organisms were received poor attention during the last two decades. However, scientific names of “beneficial strains” are essential for proper use in food and feed, meaning that taxonomy and identification are also part of researches of the “beneficial strains”. This article reviews change of identification methods and taxonomy of lactic acid bacteria. Recent studies for proposal of reclassification of the genus Lactobacillus
{"title":"Update on taxonomy and identification methods of lactic acid bacteria and recent studies toward a reclassification of the genus Lactobacillus","authors":"A. Endo","doi":"10.4109/JSLAB.31.3","DOIUrl":"https://doi.org/10.4109/JSLAB.31.3","url":null,"abstract":"Because of the safety and functionality, lactic acid bacteria have been intensively studied for purposes of industrial application, especially in probiotics field. Taxonomy and identification of the organisms were received poor attention during the last two decades. However, scientific names of “beneficial strains” are essential for proper use in food and feed, meaning that taxonomy and identification are also part of researches of the “beneficial strains”. This article reviews change of identification methods and taxonomy of lactic acid bacteria. Recent studies for proposal of reclassification of the genus Lactobacillus","PeriodicalId":117947,"journal":{"name":"Japanese Journal of Lactic Acid Bacteria","volume":"44 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2020-03-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"114402148","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"How bacteria move without flagella","authors":"Daisuke Nakane, T. Nishizaka","doi":"10.4109/JSLAB.31.10","DOIUrl":"https://doi.org/10.4109/JSLAB.31.10","url":null,"abstract":"","PeriodicalId":117947,"journal":{"name":"Japanese Journal of Lactic Acid Bacteria","volume":"85 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2020-03-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"116235708","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Methods for analyzing next-generation sequencing data XV. RNA-seq analysis (Part 3)","authors":"Tomoko Terada, K. Shimizu, K. Kadota","doi":"10.4109/JSLAB.31.25","DOIUrl":"https://doi.org/10.4109/JSLAB.31.25","url":null,"abstract":"","PeriodicalId":117947,"journal":{"name":"Japanese Journal of Lactic Acid Bacteria","volume":"45 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2020-03-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"122827348","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Methods for analyzing next-generation sequencing data XIV. RNA-seq analysis (Part 2)","authors":"Tomoko Terada, K. Shimizu, K. Kadota","doi":"10.4109/jslab.30.153","DOIUrl":"https://doi.org/10.4109/jslab.30.153","url":null,"abstract":"","PeriodicalId":117947,"journal":{"name":"Japanese Journal of Lactic Acid Bacteria","volume":"48 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-11-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"117052152","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Comprehensive studies on the interactions between bile acid and lactic acid bacteria/bifidobactria/gut microbes","authors":"A. Yokota","doi":"10.4109/jslab.30.143","DOIUrl":"https://doi.org/10.4109/jslab.30.143","url":null,"abstract":"","PeriodicalId":117947,"journal":{"name":"Japanese Journal of Lactic Acid Bacteria","volume":"56 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-11-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"133783603","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ken-ichiro Suzuki, Mayu Shibano, Noritaka Hiratsuka, Shunichi Nakayama, T. Kadokura
{"title":"Occurrence of 10-hydroxyoctadecanoic acid in the cells of Lactobacillus acetotolerans grown in media containing acetic acid and Tween 80.","authors":"Ken-ichiro Suzuki, Mayu Shibano, Noritaka Hiratsuka, Shunichi Nakayama, T. Kadokura","doi":"10.4109/jslab.30.75","DOIUrl":"https://doi.org/10.4109/jslab.30.75","url":null,"abstract":"","PeriodicalId":117947,"journal":{"name":"Japanese Journal of Lactic Acid Bacteria","volume":"66 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"130236883","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Methods for analyzing next-generation sequencing data XIII.RNA-seq analysis (Part 1)","authors":"Tomoko Terada, M. Sakamoto, K. Shimizu, K. Kadota","doi":"10.4109/jslab.30.38","DOIUrl":"https://doi.org/10.4109/jslab.30.38","url":null,"abstract":"","PeriodicalId":117947,"journal":{"name":"Japanese Journal of Lactic Acid Bacteria","volume":"62 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2019-03-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"115272581","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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