Euphytica最新文献

The ‘Menglina Leddy’ lily cultivar was selected from the Lilium longiflorum Thunb. ‘White Fox’ γ-rays irradiation line. It produces much less pollen than ‘White Fox’ but has similar morphology traits. In order to reveal the effects of gamma irradiations on the chromosomes, mitosis, and meiosis in ‘Menglina Leddy’ cells were investigated by fluorescence in situ hybridization using rDNA and telomeric repeat probes. Although both ‘Menglina Leddy’ and ‘White Fox’ had 24 chromosomes, a considerable amount of chromosomal breaking and rejoining were detected in the former. A super long and two super small chromosomes appeared in all the ‘Menglina Leddy’ cells. Meiotic abnormalities occurred at each separation stage. Chromosomes pairing configuration showed that complex recombination had happened in ‘Menglina Leddy’. The super long chromosome was a Robertsonian translocation product composed of two non-homologous long arms. The chromosome deletions and recombinations did not affect the main ornamental traits, but allowed it to acquire the characteristic of less pollen.

Rice quality has a major impact on its economic value, necessitating the breeding of high-quality grain varieties. In addition, varieties with superior germination and growth at low temperatures are required for direct sowing, which enables the low-cost production of rice. We developed Akikei770, a near-isogenic line from the high-quality, good-tasting cultivar Akitakomachi, carrying the qLTG3-1 gene from the Maratelli cultivar, which enhances low-temperature germinability. Although Akikei770 exhibited improved low-temperature germinability, it was inferior to Akitakomachi in appearance quality of brown rice and in eating quality of cooked rice. In Akikei770, a short arm region of up to 222 kb on chromosome 3 from Maratelli was introgressed, and only the qLTG3-1 gene exhibited polymorphisms within the coding region compared to Akitakomachi. The qLTG3-1 genotype was significantly associated with brown rice quality in the F₂ population, which indicates that the qLTG3-1 gene was involved in this trait with no involvement of other chromosomal regions of Akikei770. The functional qLTG3-1 allele in Akikei770, encoding a hybrid glycine-rich protein (HyGRP) that is localized on the cell wall or membrane, enhanced the low-temperature germinability. Because a loss-of-function allele of qLTG3-1 increased the appearance quality of brown rice in a recessive manner, it was concluded that HyGRP, which enhances low-temperature germinability, has a pleiotropic effect that reduces the appearance quality of brown rice.

In guava (Psidium guajava), the impact of self-pollination on the quantitative traits of the fruits is not fully understood, necessitating further investigation. This study aimed to estimate the effects of selfing on fruit traits in S₁ and S₂ inbred families of guava and to explore potential impacts on genetic diversity. Eighteen S₁ families were generated through selfing of progenies from biparental crosses, and ten S₂ families were produced by selfing superior genotypes from S₁ families. The experiment was conducted at the Experimental Station of Ilha Barra do Pomba, in the municipality of Itaocara-Rio de Janeiro, Brazil. It utilized a randomized complete block design, with three replications and ten plants per plot. Evaluated traits included fruit weight, length, diameter, length-diameter ratio, endocarp thickness, mesocarp thickness, pulp weight, and soluble solids content. The data underwent individual analysis of variance, yielding predicted mean trait values for S₁ and S₂ generations, alongside correlation and homozygosity estimates. Genetic diversity was assessed using Mahalanobis distance and UPGMA cluster analysis, and comparative box plots between inbred populations were created for the evaluated traits. Box plot analysis revealed symmetry in most evaluated traits, suggesting uniformity in the data due to the selfing strategy. Analysis of variance indicated statistically significant differences in all traits, highlighting variability between populations S₁ and S₂. Fruit and pulp weights exhibited high homozygosity levels, with values of 90.86 and 102.59 respectively, linked to increased fruit traits in the S₂ population, indicating their importance in the fixation of favorable alleles. Fruit weight, length, and diameter, endocarp thickness, and mesocarp thickness showed strong correlations, exceeding 0.70. Genetic diversity assessment via Mahalanobis distance indicated a decrease in genetic variability, evidenced by fewer groups in S₂ compared to the S₁ population. However, this reduction did not noticeably affect the average performance of the S₂ population. The results indicate that the two generations of self-pollination did not negatively affect the phenotypic values of the evaluated traits.

Black soybeans with green cotyledon have long been widely consumed in the East due to their high content of health-promoting anthocyanins and lutein. However, major anti-nutritional and allergenic components such as lectin, Kunitz trypsin inhibitor (KTI), P34, lipoxygenase, and stachyose are contained in mature seed. The objective of this research is to breed a soybean line with a black seed coat, a green cotyledon, and the penta null genotype (lele-titi-p34p34-lox1lox1lox2lox2lox3lox3-rs2rs2) for all five components. The F₂ plant strain with penta null genotype for lectin, KTI, P34, lipoxygenase, and stachyose components was developed. The breeding line has purple flower, determinate growth habit, brown pod, black seed coat and green cotyledon. The stem height of the breeding line was 57.0 cm and 100 seed weight was 31.5 g. This is the first soybean breeding line with black seed coat, green cotyledon and penta null genotypes for lectin, KTI, P34, lipoxygenase, and stachyose factors. This line will be used as parent to improve a black soybean cultivar with green cotyledon that have significantly reduced anti-nutritional and allergenic traits.

Agronomical traits of crop plants exhibit quantitative variation that is controlled by multiple genes and is dependent on environmental conditions. The main objective of this study was to decipher the genotype-by-environment interaction (GEI) for six yield-related traits of 25 winter oilseed rape (WOSR) genotypes using the additive main effects and multiplicative interaction (AMMI) model. The genotypes chosen included canola cultivars, our newly developed WOSR breeding lines, yellow-seeded, semi-resynthesized and mutant genotypes, together with ogu-INRA F1 hybrids and their parental lines. These were tested in field trials at two locations over three growing seasons. Field experiments were conducted in a randomized block design with four replicates. We recorded the beginning of flowering, seed yield (SY) and SY components, the number of siliques per plant, the length of siliques, the number of seeds per silique, and the weight of 1000 seeds. The average SY in six environments varied from 16.55 to 41.64 dt·ha⁻¹. The AMMI analysis showed significant effects of both G and E, as well as GEI, for the above traits. In this study, we observed that the climate condition, especially precipitation in addition to the soil type were the most influential factors on the SY and SY-trait value. Seed yield was positively correlated with: the number of siliques per plant, the length of siliques, the number of seeds per silique and the weight of 1000 seeds. We also found that our new ogu-INRA F1 hybrids, as well as cultivars Monolit, Mendel, Starter and Sherlock, showed stability for the analyzed traits.

The breeding of improved varieties of root, tuber, and banana (RTB) crops has led to the release of several varieties with excellent agronomic performances, such as high yield and disease resistance. However, farmers and end users have hampered the adoption of these improved varieties of RTB crops over the years due to their processing capacity and final product quality. Across the RTB crops, the key quality and adoption criteria differ for different products. The vital quality traits that can enhance the adoption of these improved varieties have been identified for cassava, yam, and banana/plantain. Some significant traits cassava farmers and consumers prefer are early-bulking, non-bitter roots, in-ground storability, drought tolerance, good pounding capabilities, and excellent cooking and sensory qualities. The acceptance of improved yam varieties is driven by good yield, resistance to pests, good cooking quality, and admirable textural attributes for both boiled and pounded yams. Also, for banana/plantain Musa spp., farmers and end users prefer varieties with appealing sensory properties and good agronomic attributes. Farmers’ and end-users’ most desired traits are high yields, good cooking qualities, and climate resilience. Though the quantification of some of these quality traits is challenging, the synergized work of breeders and food scientists with the use of standardized protocols during the breeding, selection, and evaluation stages will enhance the production of cultivars that will meet the preferences of all stakeholders along the food product value chain of the RTB crops.

Wheat production in cooler regions like the north-western Himalayas, is significantly impeded by devastating diseases, namely stripe rust (SR) and powdery mildew (PM). Genetic resistance against SR and PM loses effectiveness over time which underscores the importance of periodic disease screening. This study aims to assess resistance to SR and PM in 81 wheat genotypes across multiple locations over three years (2019–20, 2021–22 and 2022–23); and detect candidate genes (Yr5, Yr10 and Pm24) for resistance using respective molecular markers viz., SSR/STS primers (STS7/8, Xp3000 and Xgwm337). The resistance towards SR and PM under natural epiphytotic conditions was displayed by eight and twelve genotypes respectively, across all locations. Notably, four genotypes (DH 202, HPW 368, HPW 373 and DH 114) were found resistant to both diseases. The phenotypic disease reaction for SR and PM was further validated through molecular markers. Genotypes DH 202, DH208, DH 217, CIMMYT Entry no. 23 and VL 829 emerged as high yielding disease resistant genotypes. Agrometeorological parameters specifically, precipitation and relative humidity exhibited significant positive correlations with disease incidence, leading to reduced grain yields. Genotype and genotype by environment interaction (GGE) biplot identified stable genotypes with less disease incidence over locations. Additionally, Kukumseri may serve as the optimal test site for screening wheat germplasm against SR, while Palampur and Kukumseri could be ideal for PM screening. Genotypes exhibiting combined disease resistance to both SR and PM, alongwith superior agronomic traits, hold promise for immediate deployment as wheat varieties or as potential donors for breeding resistant cultivars.

The performance differences in cassava genotypes arising from genotype vs. environment interactions (G × E) often lead to responses that are significantly lower than expected for selection. The objective of this study was to evaluate different stability methods, both parametric and non-parametric, such as additive main-effects and multiplicative interaction (AMMI), main effect of genotypes plus G × E (GGE), and weighted average of absolute scores (WAASB), in order to quantify the G × E in multi-environmental trials. A total of 12 genotypes were assessed across 12 environments using a completely randomized block design, with three replicates for traits such as fresh root yield (FRY) and dry matter content in the roots (DMC). The data were subjected to analysis of variance and the Scott Knott test (p < 0.05). The sum of squares (SQ) of genotypes, environment, and G × E effects were equally distributed for FRY, whereas for DMC, these effects accounted for 64.1%, 21.9%, and 13.8% of the SQ, respectively, indicating a lower environmental effect on this characteristic. Using the AMMI, GGE, and WAASB methods, genotypes with high agronomic performance and stability for FRY (BR11-34–41 and BR11-34–69) (> 32 t ha⁻¹) and DMC (BRS Novo Horizonte, BR12-107–002, and BR11-24–156) (> 37%) were identified. The broad-sense heritability (({h}^{2})) for FRY and DMC was estimated to be 0.45 and 0.75, respectively. Approximately 72% of the methods identified BRS Novo Horizonte as the genotype with the highest stability and performance for DMC, while 47% identified genotypes BR11-34–41 and BR11-34–69 for FRY and intermediate DMC. Genotype BR11-24–156 exhibited high static stability according to 50% of the methods. Significant correlations were observed between stability and agronomic performance across the different methods, enabling the formation of groups based on stability concepts. Additionally, it was found that two mega-environments existed for FRY, whereas DMC displayed a single mega-environment with similar patterns, indicating an absence of G × E. We identified superior genotypes that could be promoted to national performance trials to develop stable cultivars with better yield attributes in cassava.

Lobed leaves are vital in the high-density cultivation and breeding of wax gourd (Benincasa hispida). Thus, determining the molecular mechanisms underlying the development of lobed leaves is important. To this end, this study aimed to resequence 105 recombinant inbred lines, constructed using the parental lines, GX-7 and my-1, to elucidate the molecular mechanisms underlying leaf development in wax gourd. Genes associated with lobed leaves in wax gourds were first evaluated via quantitative trait loci (QTL) mapping. Next, the F₂ population was expanded to 2000 plants for fine mapping and candidate gene analysis. Thus, the candidate area was reduced to 1.129 Mb, located between markers InDel980 and InDel853. Functional analyses of candidate genes were performed using gene functional annotation, coding sequence analyses, and expression analyses. Among 48 genes in the candidate region, only Bch04G012650 (termed BhDDL4.1) showed differences in expression between the two parents. Using sequence differences of previously screened candidate genes, an InDel marker (InDel623) was developed in BhDDL4.1 for molecular marker–assisted breeding of wax gourd; the accuracy rate was 74.03%. Our results indicate that BhDDL4.1 may play a key role in the regulation of the lobed leaf trait; thereby, we provide a theoretical basis for further exploration of the molecular mechanisms underlying the lobed leaf trait in wax gourd.

In recent years, the integration of advances in biotechnology, genomic research, and the application of molecular markers with classical plant breeding methods has formed the basis of a multidisciplinary field called plant molecular breeding or genome-based plant breeding. This approach is widely used in breeding programs for various crops including sugar beet. The complete sequencing of the B. vulgaris genome provided a valuable tool for sugar beet genomics research. Additionally, advances in genome sequencing, the development of markers based on single nucleotide polymorphisms, and robotic methods for high-throughput genotyping have reduced the cost of genotypic evaluations for sugar beet. In Iran, the most damaging diseases affecting sugar beet include rhizomania, beet cyst nematode, root-knot nematode, and Rhizoctonia. Breeding for resistance to these diseases has been a significant focus. Over the past decades, researchers at the Iranian Sugar Beet Seed Institute and the University of Padua, Italy, have identified RAPD, SCAR, STS, and SNP molecular markers linked to resistance genes for these diseases using sugar beet mapping populations and other genotypes. In recent years, these selected markers have been used for molecular screening of thousands of single plants from various genotypes to determine the presence of the aforementioned resistance genes in breeding populations and commercial hybrids.