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Toward rigorous control conditions in trials of digital therapeutics 朝着数字治疗试验中严格的控制条件发展
IF 6.7 2区 医学 Q1 CLINICAL NEUROLOGY Pub Date : 2025-10-25 DOI: 10.1016/j.euroneuro.2025.09.013
Nathan T.M. Huneke , Blanca Bolea-Alamañac
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引用次数: 0
Response to the letter regarding “Risk of manic switch and suicidal outcomes in bipolar depression treated with esketamine” 对“艾氯胺酮治疗双相抑郁症躁狂转换风险和自杀结果”的回复
IF 6.7 2区 医学 Q1 CLINICAL NEUROLOGY Pub Date : 2025-10-25 DOI: 10.1016/j.euroneuro.2025.10.001
Ting-Hui Liu , Jheng-Yan Wu , Po-Yu Huang , Wan-Lin Cheng , Chih-Cheng Lai
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引用次数: 0
Antidepressant use in pregnancy and neonatal outcomes: reassuring findings from an asian cohort 抗抑郁药在妊娠和新生儿结局中的使用:来自亚洲队列的令人放心的发现
IF 6.7 2区 医学 Q1 CLINICAL NEUROLOGY Pub Date : 2025-10-25 DOI: 10.1016/j.euroneuro.2025.10.003
Qing Ren , Mingyi Gu , Xin Wang
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引用次数: 0
Is psychosis an obstetric condition? Revisiting the role of early-life environmentally stressful events 精神病是一种产科疾病吗?重新审视早年环境压力事件的作用
IF 6.7 2区 医学 Q1 CLINICAL NEUROLOGY Pub Date : 2025-10-25 DOI: 10.1016/j.euroneuro.2025.10.002
Inmaculada Baeza , Clemente García-Rizo
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引用次数: 0
Structural connectomic signatures of childhood maltreatment across affective and psychotic disorders 儿童期虐待在情感性和精神性障碍中的结构连接组特征。
IF 6.7 2区 医学 Q1 CLINICAL NEUROLOGY Pub Date : 2025-10-13 DOI: 10.1016/j.euroneuro.2025.09.009
Linda M. Bonnekoh , Marius Gruber , Cathrine Thams , Kira Flinkenflügel , Susanne Meinert , Janik Goltermann , Dominik Grotegerd , Julia Hubbert , Judith Krieger , Christoph Jurischka , Ruth H. Fellmeth , Nils R. Winter , Tim Hahn , Elisabeth J. Leehr , Nils Opel , Marc Pawlitzki , Paula Rehm , Nina v. Werthern , Sharmili Edwin Thanarajah , Stefanie Fischer , Jonathan Repple
Exposure to childhood maltreatment (CM) is a crucial risk factor for affective disorders and schizophrenia, which are linked to structural brain network alterations. We hypothesized a significant association between CM and brain structural connectivity in a transdiagnostic sample. Participants included patients with major depressive disorder (n = 827), bipolar disorder (n = 134), schizophrenia spectrum disorders (n = 118), and healthy controls (n = 932) aged 18–65 from the Marburg-Muenster Affective Disorders Cohort Study. Structural brain networks were reconstructed from structural and diffusion-weighted MRI. CM was assessed using the Childhood Trauma Questionnaire (CTQ) based on established cut-offs. Analyses of covariance investigated the main effect of CM and the interaction of diagnosis and CM on global network metrics. In addition, network-based statistic (NBS) analyses were performed to identify the underlying subnetworks. History of CM was positively associated with the number of connections (pFDR=0.01; CM: 95 %-CI=[533.9; 540.6], No CM: 95 %-CI=[529.1; 535.0]), normalized (pFDR=0.02; CM: 95 %-CI=[0.860; 0.863], No CM: 95 %-CI=[0.857; 0.860]) and non-normalized network efficiency (pFDR=0.01; CM: 95 %-CI=[0.405; 0.407], No CM: 95 %-CI=[0.403; 0.405]) and negatively associated with normalized network clustering (pFDR=0.045; CM: 95 %-CI=[4.976; 5.065], No CM: 95 %-CI=[5.100; 5.150]). There were no significant interaction effects of CM and diagnosis. NBS analyses revealed a large network of edges, in which individuals with CM exhibited higher structural connectivity compared to those without, which persisted after correcting for diagnosis. These findings indicate a connectome signature of CM, marked by hyperconnectivity, across major mental disorders and in healthy individuals, suggesting that CM affects connectome architecture independent of present psychiatric diagnoses.
暴露于儿童虐待(CM)是情感障碍和精神分裂症的关键风险因素,这与大脑结构网络改变有关。我们假设在跨诊断样本中CM和脑结构连接之间存在显著关联。参与者包括来自Marburg-Muenster情感障碍队列研究的18-65岁的重度抑郁症(n = 827)、双相情感障碍(n = 134)、精神分裂症谱系障碍(n = 118)和健康对照(n = 932)患者。通过结构和弥散加权MRI重建脑结构网络。CM评估使用儿童创伤问卷(CTQ)基于既定的切断。协方差分析研究了CM的主要作用以及诊断和CM对全局网络指标的交互作用。此外,还进行了基于网络的统计(NBS)分析,以确定底层子网。CM病史与连接数(pFDR=0.01, CM: 95% -CI=[533.9; 540.6], No CM: 95% -CI=[529.1; 535.0])、归一化(pFDR=0.02, CM: 95% -CI=[0.860; 0.863], No CM: 95% -CI=[0.857; 0.860])和非归一化网络效率(pFDR=0.01, CM: 95% -CI=[0.405; 0.407], No CM: 95% -CI=[0.403; 0.405])呈正相关,与归一化网络聚类(pFDR=0.045, CM: 95% -CI=[4.976; 5.065], No CM: 95% -CI=[5.100; 5.150])呈负相关。CM与诊断无显著交互作用。NBS分析揭示了一个巨大的边缘网络,与没有CM的个体相比,CM个体表现出更高的结构连通性,这种连通性在纠正诊断后仍然存在。这些发现表明,在主要精神障碍和健康个体中,CM的连接组特征以超连通性为特征,表明CM影响连接组结构独立于目前的精神病学诊断。
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引用次数: 0
A REPEATED MEASURES GWAS IN RELATIVES: DETECTING AGE-VARYING GENETIC EFFECTS ON MATERNAL DEPRESSION IN MOBA 在亲属中重复测量:检测年龄变化的遗传对moba母亲抑郁的影响
IF 6.7 2区 医学 Q1 CLINICAL NEUROLOGY Pub Date : 2025-10-01 DOI: 10.1016/j.euroneuro.2025.08.483
Christopher Rayner , Tom McAdams , Alexandra Havdahl , Eivind Ystrom , Ziada Ayorech
<div><h3>Background</h3><div>Genome-wide association studies (GWAS) of depression typically rely on case-control analyses, using lifetime history (LTH) of a diagnosis as the primary outcome. Longitudinal cohorts provide opportunities to understand how genetic effects on depression vary across time and contexts. We aimed to harness repeated measures in a single sample to minimise phenotypic heterogeneity and improve statistical power to detect genetic effects on depression.</div></div><div><h3>Methods</h3><div>We used data from mothers who participated in the Norwegian Mother, Father and Child study (MoBa). We restructured the Hopkins Symptoms Checklist Depression (SCL-D) scores for 76,044 mothers by age, producing an accelerated longitudinal design with 418,159 depression observations across the lifecourse (age range: 16, 60 years old). We used continuous-time item response theory models to minimise measurement error, and Empirical Bayes Estimates with Simultaneous Correction (SCEBE) to conduct repeated measures GWAS (GWASRM). We estimated genetic effects on depression symptoms at age 30, and the linear change in age (variant by age interaction), which were combined to compute age-specific effects at ages 20 to 50 (GWASt=20..50). For comparison, we performed a GWAS of LTH depression assessed in the same sample (GWASLTH). Summary statistics from GWASRM and GWASLTH were compared using heritability and genetic correlations. We also performed 10-fold-leave-one-out GWASRM and GWASLTH, leaving 10 test datasets for polygenic index (PGI) analyses. The efficacy and robustness of SCEBE was further assessed via comparison with linear mixed effects models applied to a subset of the data. The impact of selective attrition on GWASRM is also currently under investigation.</div></div><div><h3>Results</h3><div>SCEBE is an efficient and robust method for estimating genetic variant main effects and variant-by-age interactions, with perfect overlap with effects estimated using a linear mixed model. Following GWASRM, there was one independently significant (p < 5e-8) locus associated with depression symptoms at age 30 and an additional locus at age 40. The SNP-based heritability (h2SNP) of GWASt ranged from 0.01 to 0.05. Following GWASLTH there was one independently significant locus associated with lifetime history of depression, and the h2SNP estimate was 0.15. The age-specific PGI (PGIt) was associated with higher SCL-D symptoms (β=4.21, 95% CI: 6.27, 2.14; p=6.68e-5). The PGILTH was also associated with SCL-D symptoms (β=3.73, 95% CI: 2.78, 4.68).</div></div><div><h3>Discussion</h3><div>Despite the anticipated gains in statistical power from a repeated measures approach in a homogenous sample, we did not detect substantial improvement in genome-wide signal for depression. These results might be due to etiological heterogeneity associated with depression and unobserved confounding. For example, medication status was not available across these time-points and wa
抑郁症的全基因组关联研究(GWAS)通常依赖于病例对照分析,使用诊断的终生史(LTH)作为主要结果。纵向队列研究为了解基因对抑郁症的影响如何随时间和环境而变化提供了机会。我们的目标是在单个样本中利用重复测量来最小化表型异质性,并提高检测抑郁症遗传影响的统计能力。方法我们使用参与挪威母亲、父亲和儿童研究(MoBa)的母亲的数据。我们对76044名母亲按年龄重组了霍普金斯抑郁症状检查表(SCL-D)评分,在整个生命过程中(年龄范围:16岁至60岁)进行了418159次抑郁观察的加速纵向设计。我们使用连续时间项目反应理论模型来最小化测量误差,并使用同时校正的经验贝叶斯估计(SCEBE)来进行重复测量GWAS (GWASRM)。我们估计了遗传对30岁时抑郁症状的影响,以及年龄的线性变化(年龄相互作用的变异),并将其结合起来计算20至50岁时的年龄特异性影响(GWASt=20. 50)。为了进行比较,我们对同一样本进行了LTH抑郁的GWAS评估(GWASLTH)。GWASRM和GWASLTH的汇总统计数据采用遗传力和遗传相关性进行比较。我们还进行了10倍留一GWASRM和GWASLTH,留下10个测试数据集用于多基因指数(PGI)分析。通过与应用于数据子集的线性混合效应模型的比较,进一步评估了SCEBE的有效性和稳健性。选择性磨损对GWASRM的影响目前也在研究中。结果scebe是一种有效、稳健的遗传变异主效应和年龄变异相互作用估计方法,与线性混合模型估计的效应有很好的重合。在GWASRM之后,有一个独立显著(p < 5e-8)基因座与30岁时的抑郁症状相关,另一个基因座与40岁时的抑郁症状相关。GWASt的snp遗传力(h2SNP)范围为0.01 ~ 0.05。在GWASLTH之后,有一个与抑郁终生史相关的独立显著位点,h2SNP估计为0.15。年龄特异性PGI (PGIt)与较高的scd症状相关(β=4.21, 95% CI: 6.27, 2.14; p=6.68e-5)。PGILTH也与SCL-D症状相关(β=3.73, 95% CI: 2.78, 4.68)。讨论:尽管在同质样本中重复测量方法的统计能力预期有所提高,但我们并没有发现抑郁症全基因组信号的实质性改善。这些结果可能是由于与抑郁症相关的病因异质性和未观察到的混杂。例如,这些时间点的药物状态不可用,也不包括在这些模型中。此外,最初和持续参与研究都与抑郁症状有关——抑郁负担最重的个体参与研究的可能性更小,更有可能提前退出研究。目前正在进行的工作是评估药物状态混淆的作用,并调整重复的GWASRM以选择性参与和损耗。
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引用次数: 0
MULTIVARIATE GENOME-WIDE ASSOCIATION STUDY OF PTSD, ALCOHOL USE AND ALCOHOL USE DISORDERS 创伤后应激障碍、酒精使用和酒精使用障碍的多变量全基因组关联研究
IF 6.7 2区 医学 Q1 CLINICAL NEUROLOGY Pub Date : 2025-10-01 DOI: 10.1016/j.euroneuro.2025.08.497
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引用次数: 0
GENETIC UNDERPINNINGS OF TREATMENT-RESISTANT DEPRESSION: INSIGHTS FROM THE PSYCHSTRATA CONSORTIUM 难治性抑郁症的遗传基础:来自精神病协会的见解
IF 6.7 2区 医学 Q1 CLINICAL NEUROLOGY Pub Date : 2025-10-01 DOI: 10.1016/j.euroneuro.2025.08.535
Julia Kraft , Chiara Fabbri , Eleni Friligkou , Brittany Mitchell , Kristi Krebs , Joanna Biernacka , Julia Sealock , Mikael Landén , Danyang Li , deCODE Genetics Team , FinnGen consortium , Juan De La Hoz , FinnGen consortium , Yingzhe Zhang , Elise Koch , Bernhard T. Baune , Stephan Ripke
Depressive Symptoms in Major Depressive Disorder (MDD) are primarily treated with antidepressant medication. However, a substantial proportion of patients do not achieve a meaningful symptom improvement, even after multiple medication trials, posing a major clinical and public health challenge. Investigating the genetic underpinnings of treatment-resistant depression (TRD) may potentially reveal biological components that contribute to poor treatment outcomes.
Through the PsychSTRATA consortium, we aim to investigate the biological basis of treatment resistance across major psychiatric disorders, including MDD, bipolar disorder, and schizophrenia. In this study, we focus specifically on the genetic basis of TRD within MDD by performing a genome-wide associations study comparing individuals with and without TRD. In collaboration with many international sites and the antidepressant working group of the PGC, we collated and harmonized data from clinical studies, large-scale biobanks, and population-based cohorts, using electronic healthcare records (EHR), structured clinical interviews, and self-report questionnaires to define TRD.
Analyses are currently ongoing and leverage data from ∼265,000 individuals with MDD, of whom ∼39,500 were classified as TRD and ∼225,500 as non-TRD. Planned analyses include a GWAS meta-analysis, SNP-based heritability estimation, polygenic risk scoring, and comparisons across definitions to characterize the genetic architecture of TRD and validate genetic findings.
Our results will lead to an improved understanding of the pharmacogenetic mechanisms underlying TRD and help to identify both disorder-specific and shared genetic contributions with bipolar disorder and schizophrenia. Ultimately, this may inform the development of targeted or novel pharmacological strategies for individuals with treatment resistance.
重度抑郁障碍(MDD)的抑郁症状主要用抗抑郁药物治疗。然而,即使经过多次药物试验,仍有相当比例的患者没有取得有意义的症状改善,这对临床和公共卫生构成了重大挑战。研究难治性抑郁症(TRD)的遗传基础可能潜在地揭示导致治疗效果不佳的生物成分。通过PsychSTRATA联盟,我们的目标是研究主要精神疾病治疗耐药的生物学基础,包括重度抑郁症、双相情感障碍和精神分裂症。在这项研究中,我们通过对患有和不患有TRD的个体进行全基因组关联研究,特别关注MDD中TRD的遗传基础。我们与许多国际站点和PGC抗抑郁药工作组合作,使用电子医疗记录(EHR)、结构化临床访谈和自我报告问卷,整理和协调了来自临床研究、大型生物库和基于人群的队列的数据,以定义TRD。目前正在进行分析,并利用来自约265,000名重度抑郁症患者的数据,其中约39,500人被归类为TRD,约225,500人被归类为非TRD。计划的分析包括GWAS荟萃分析,基于snp的遗传力估计,多基因风险评分,以及跨定义的比较,以表征TRD的遗传结构并验证遗传发现。我们的研究结果将有助于提高对TRD的药物遗传机制的理解,并有助于确定双相情感障碍和精神分裂症的疾病特异性和共享遗传贡献。最终,这可能会为有治疗耐药性的个体提供有针对性的或新的药理学策略。
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引用次数: 0
POLYGENIC AGGREGATION OF EQTL EFFECTS REVEALS CELL-TYPE AND TRAIT-SPECIFIC LONG-RANGE REGULATORY PATTERNS equtl效应的多基因聚集揭示了细胞类型和性状特异性的远程调控模式
IF 6.7 2区 医学 Q1 CLINICAL NEUROLOGY Pub Date : 2025-10-01 DOI: 10.1016/j.euroneuro.2025.08.527
Toni Boltz, Ajay Nadig, Steve McCarroll, Wei Zhou, Elise Robinson
Gene regulation varies across genomic regions and cellular contexts, shaped by both linear distance and 3D genome architecture. Recent work on chromosomes 22q and 16p revealed that common polygenic risk for neuropsychiatric disorders - particularly schizophrenia (SCZ), autism, ADHD, and low IQ - is associated with widespread decreases in gene expression across these chromosome arms in neuronal cell types. These findings motivated our development of a scalable method to investigate the extent to which long-range regulatory patterns exist genome-wide, and whether these patterns are specific to neuropsychiatric disease or neuronal cellular contexts.
To systematically assess how regulatory effects vary with SNP-gene distance, we developed a polygenic risk score (PRS)-inspired framework that aggregates eQTL effect sizes weighted by GWAS effect sizes across different trait and cell-type contexts.
Our initial analysis successfully replicated the previous 22q findings across four neuronal cell types: glutamatergic and GABAergic neurons, astrocytes, and oligodendrocytes. We observed that SCZ-weighted eQTL effects were consistently negative across distances up to 16 Mb, particularly in glutamatergic neurons and astrocytes, where height-weighted eQTL effects were null. Oligodendrocytes exhibited null effects in both trait contexts. These results confirmed the existence of trait- and cell-type-specific signatures of long-range gene regulation. We subsequently expanded the analysis genomewide, identifying many regions of the genome in which long range eQTL effects could not be identified in any trait context (e.g. chr4: 118Mb - 151Mb), and a small number of regions of the genome in which common variant risk for SCZ, but not somatic traits, was similarly downregulating genes across large genomic territories (e.g. chr1: 1Mb - 33Mb).
Ongoing work will incorporate additional brain and non-brain cell types, and integrate chromatin contact data to connect spatial genome organization with the observed regulatory patterns. These analyses will provide additional insight into how transcriptome-wide gene dysregulation creates risk for SCZ and other neuropsychiatric disorders, and the assign biological consequence to polygenic influences on psychiatric disease. More broadly, this PRS-style eQTL aggregation framework offers a scalable approach for identifying how genetic risk influences gene regulation across distance, cellular identity, and disease relevance.
基因调控在不同的基因组区域和细胞背景下变化,由线性距离和三维基因组结构形成。最近对染色体22q和16p的研究表明,神经精神疾病——特别是精神分裂症(SCZ)、自闭症、多动症和低智商——的常见多基因风险与神经元细胞类型中这些染色体臂上基因表达的普遍减少有关。这些发现促使我们开发了一种可扩展的方法来研究全基因组范围内存在的远程调节模式的程度,以及这些模式是否特定于神经精神疾病或神经元细胞环境。为了系统地评估调控效应如何随着snp -基因距离的变化而变化,我们开发了一个多基因风险评分(PRS)启发的框架,该框架汇总了不同性状和细胞类型背景下由GWAS效应量加权的eQTL效应量。我们的初步分析成功地在四种神经细胞类型中复制了之前的22q发现:谷氨酸能和gaba能神经元、星形胶质细胞和少突胶质细胞。我们观察到,scz加权的eQTL效应在长达16 Mb的距离上始终为负,特别是在谷氨酸能神经元和星形胶质细胞中,高度加权的eQTL效应为零。少突胶质细胞在这两种性状背景下均表现为零效应。这些结果证实了长距离基因调控的性状和细胞类型特异性特征的存在。随后,我们在全基因组范围内扩展了分析,发现了许多在任何性状背景下都无法发现远程eQTL效应的基因组区域(例如chr4: 118Mb - 151Mb),以及少数基因组区域,在这些区域中,SCZ的常见变异风险(而不是体细胞性状)类似地下调了大基因组区域的基因(例如chr1: 1Mb - 33Mb)。正在进行的工作将纳入更多的大脑和非大脑细胞类型,并整合染色质接触数据,将空间基因组组织与观察到的调节模式联系起来。这些分析将进一步深入了解转录组基因失调如何造成SCZ和其他神经精神疾病的风险,以及多基因对精神疾病影响的生物学后果。更广泛地说,这种prs风格的eQTL聚合框架提供了一种可扩展的方法,用于识别遗传风险如何跨距离、细胞身份和疾病相关性影响基因调控。
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引用次数: 0
RARE CODING VARIANTS IN 195,257 INDIVIDUALS REVEAL 29 NOVEL BIPOLAR DISORDER GENES AND STRUCTURAL MISSENSE HOTSPOTS IN PROTEIN SPACE 195,257个个体的罕见编码变异揭示了29个新的双相情感障碍基因和蛋白质空间结构错义热点
IF 6.7 2区 医学 Q1 CLINICAL NEUROLOGY Pub Date : 2025-10-01 DOI: 10.1016/j.euroneuro.2025.08.543
Calwing Liao, The Bipolar Exome Consortium (BipEx), Benjamin Neale
<div><h3>Background</h3><div>Bipolar disorder (BD) is a complex psychiatric disorder characterized by recurrent mood disturbances with significant variations in disease severity and treatment response. Despite its substantial impact on individuals, the genetic factors contributing to BD remain incompletely understood. Here, we present an updated effort from the Bipolar Exome (BipEx) consortium. We increased the effective sample size by 5-fold relative to BipEx 1.0 across diverse populations to investigate the role of protein-truncating variants (PTVs), copy number variants (CNVs), and damaging missense variants in the pathogenesis of BD.</div></div><div><h3>Methods</h3><div>Our study cohort comprised 195,257 individuals, including 45,479 cases and 149,778 controls from ancestrally diverse populations. Whole exome sequencing was performed to capture protein-coding regions, followed by robust variant calling and stringent quality control. We analyzed ultra-rare variants with a minor allele count < 5, focusing on PTVs and damaging missense variants. CNVs were identified using GATK-gCNV, focusing on rare exonic deletions and duplications spanning more than three exons. To characterize structural convergence of missense variation, we mapped variant positions to protein 3D structures using AlphaFold and identified significant clustering in spatial neighborhoods across the proteome.</div></div><div><h3>Results/Discussion</h3><div>We identified 29 FDR-significant genes, including AKAP11, SHANK1, ATP2B2, KDM5B, and DOP1A, associated with increased burden of PTVs and damaging missense variants. These genes cluster into early and late neurodevelopmental expression patterns and recapitulate clinically relevant pathways, including those associated with clozapine response. Using regional missense constraint metrics, we observed damaging missense variants in BD cases—but not controls—within a highly constrained region of ATP2B2. We also identified significant 3D missense clustering in ATP2A2 and G3BP2, implicating structurally focused hotspots as contributing to BD risk. CNV analysis revealed BPNT2 as the strongest deletion-associated gene (OR: 9.04, P = 2.67 × 10⁻⁹), a known lithium target, and BIRC6 as the most significant duplication hit (OR: 5.04, P = 2.49 × 10⁻¹⁴). We also found evidence for a potential reciprocal CNV locus at 15q11.2, where the duplication increases BD risk while the deletion is depleted in cases.</div></div><div><h3>Conclusion</h3><div>By leveraging data from nearly 200,000 individuals, BipEx 2.0 provides a comprehensive view of rare genetic variation in BD, emphasizing contributions from PTVs, CNVs, and damaging missense variants. The identification of missense-convergent 3D protein hotspots, including in ATP2A2 and G3BP2, highlights the value of integrating structural biology into psychiatric gene discovery. These results illuminate convergent biological mechanisms across variant classes and point to new directions for mechanistic i
背景双相情感障碍(BD)是一种复杂的精神障碍,其特征是复发性情绪障碍,在疾病严重程度和治疗反应上有显著差异。尽管对个体有重大影响,但导致双相障碍的遗传因素仍不完全清楚。在这里,我们介绍了双极外显子组(BipEx)联盟的最新成果。我们将不同人群的有效样本量相对于BipEx 1.0增加了5倍,以研究蛋白质截断变异体(PTVs)、拷贝数变异体(CNVs)和破坏性错译变异体在bd发病机制中的作用。方法我们的研究队列包括195,257个人,其中包括来自不同祖先人群的45,479例病例和149,778例对照。进行全外显子组测序以捕获蛋白质编码区,然后进行健壮的变体调用和严格的质量控制。我们分析了等位基因数量较少的超罕见变异<; 5,重点是ptv和破坏性错义变异。使用GATK-gCNV鉴定cnv,重点关注罕见的外显子缺失和超过三个外显子的重复。为了表征错义变异的结构收敛性,我们使用AlphaFold将变异位置映射到蛋白质3D结构上,并在整个蛋白质组的空间邻域中发现了显著的聚类。结果/讨论我们鉴定了29个fdr显著基因,包括AKAP11、SHANK1、ATP2B2、KDM5B和DOP1A,这些基因与PTVs负担增加和破坏性错义变异相关。这些基因聚集成早期和晚期神经发育表达模式,并概括了临床相关途径,包括与氯氮平反应相关的途径。利用区域错义约束指标,我们观察到在ATP2B2高度受限区域内,BD病例(而非对照组)存在破坏性错义变异。我们还在ATP2A2和G3BP2中发现了显著的3D错义聚集,这意味着结构集中的热点与BD风险有关。CNV分析显示,BPNT2是最强的缺失相关基因(OR: 9.04, P = 2.67 × 10⁻(9)),是已知的锂靶基因,BIRC6是最显著的重复命中基因(OR: 5.04, P = 2.49 × 10⁻(9))。我们还发现在15q11.2位点存在潜在的反向CNV位点的证据,该位点的重复增加了BD的风险,而缺失在某些情况下会减少。通过利用近20万个体的数据,BipEx 2.0提供了BD罕见遗传变异的全面视图,强调了PTVs、CNVs和破坏性错义变异的贡献。包括ATP2A2和G3BP2在内的错义聚合3D蛋白热点的鉴定,凸显了将结构生物学整合到精神病学基因发现中的价值。这些结果阐明了不同种类的趋同生物学机制,并为机制研究指明了新的方向。
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