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Sleep timing in flies from "adolescence" to adulthood. 从“青春期”到成年期果蝇的睡眠时间。
IF 2.4 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Fly
Pub Date : 2025-12-01 Epub Date: 2024-12-30 DOI: 10.1080/19336934.2024.2448022
Esther D Domenie, Paola Cusumano, Sara Montagnese, Rodolfo Costa

The aim of the present study was to assess sleep timing in Drosophila melanogaster at different ages, within the setting of an enforced schedule of varying light-dark stimuli, simulating light exposure variations between four typical office working days and one free day spent outside by a human, for a total of 30 days. Locomotor activity recording started when male flies were 3 days old. Flies exhibited a bimodal activity pattern, with a morning and an evening peak, and clear anticipation of the lights on and lights off transitions. From experimental day 10 (i.e. 12-day-old flies) onwards, a decrease in activity counts/increase in sleep amount were observed. On free days, a rise in activity counts and a reduction in sleep amount during the lights on interval was observed and was also present, albeit less obvious, on the subsequent working day during the lights off interval. A progressive delay in sleep onset was observed in the first days of the experiment, peaking on day 4 (i.e. 6-day-old flies), after which sleep onset timing gradually advanced. A delay in sleep offset was also observed for the first 13 days of the experiment, after which sleep offset stabilized. In conclusion, 'adolescent' flies exhibited changes in sleep timing that were reminiscent of those of human adolescents.

本研究的目的是评估不同年龄的黑腹果蝇的睡眠时间,在不同的明暗刺激的强制时间表设置下,模拟四个典型的办公室工作日和一个人类在户外自由度过的一天之间的光暴露变化,总共30天。运动活动记录开始于雄蝇3天大时。苍蝇表现出双峰活动模式,有早晚高峰,对开灯和关灯的过渡有清晰的预期。从实验第10天(即12天大的果蝇)开始,观察到活动次数减少/睡眠量增加。在空闲的日子里,在开灯间隔期间观察到活动次数的增加和睡眠时间的减少,尽管不太明显,但在随后的工作日,在关灯间隔期间也出现了这种情况。在实验的头几天观察到睡眠开始逐渐延迟,在第4天(即6天大的苍蝇)达到峰值,之后睡眠开始时间逐渐提前。在实验的前13天也观察到睡眠偏移的延迟,之后睡眠偏移趋于稳定。总之,“青春期”果蝇表现出的睡眠时间变化让人想起人类青少年。
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引用次数: 0
25 years of Drosophila "Sleep genes". 25年的果蝇“睡眠基因”。
IF 2.4 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Fly
Pub Date : 2025-12-01 Epub Date: 2025-05-06 DOI: 10.1080/19336934.2025.2502180
Orie Thomas Shafer

The field of Drosophila sleep research, which began 25 years ago, has identified more than 200 genes influencing sleep. In this review, I summarize the foundation of the field and the growing list of genes implicated in sleep regulation. I compare the genetic methods used to identify genes governing sleep and circadian rhythms and the distinct outcomes of screens for genes regulating these two highly related processes. Finally, I discuss the ~ 200 sleep-regulating genes of Drosophila in the context of recent developments in the field and voice reasons for scepticism regarding the relevance of these genes to the homoeostatic regulation of sleep. Finally, I speculate on the future promise of the fly model system for revealing conserved molecular mechanisms of sleep homoeostasis.

果蝇睡眠研究领域始于25年前,已经确定了200多个影响睡眠的基因。在这篇综述中,我总结了这个领域的基础和越来越多的与睡眠调节有关的基因。我比较了用于识别控制睡眠和昼夜节律的基因的遗传方法,以及筛选调节这两个高度相关过程的基因的不同结果。最后,我在该领域的最新发展背景下讨论了果蝇的约200个睡眠调节基因,并提出了怀疑这些基因与睡眠平衡调节的相关性的理由。最后,我推测果蝇模型系统在揭示睡眠平衡的保守分子机制方面的未来前景。
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引用次数: 0
An updated proteomic analysis of Drosophila haemolymph after bacterial infection. 细菌感染后果蝇血淋巴的最新蛋白质组学分析。
IF 2.4 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Fly
Pub Date : 2025-12-01 Epub Date: 2025-04-13 DOI: 10.1080/19336934.2025.2485685
Samuel Rommelaere, Fanny Schüpfer, Florence Armand, Romain Hamelin, Bruno Lemaitre

Using an in-depth Mass Spectrometry-based proteomics approach, we provide a comprehensive characterization of the hemolymphatic proteome of adult flies upon bacterial infection. We detected and quantified changes in abundance of several known immune regulators and effectors, including multiple antimicrobial peptides, peptidoglycan-binding proteins and serine proteases. Comparison to previously published transcriptomic analyses reveals a partial overlap with our dataset, indicating that many proteins released into the haemolymph upon infection may not be regulated at the transcript level. Among them, we identify a set of muscle-derived proteins released into the haemolymph upon infection. Finally, our analysis reveals that infection induces major changes in the abundance of proteins associated with mitochondrial respiration. This study uncovers a large number of previously undescribed proteins potentially involved in the immune response.

利用深入的质谱为基础的蛋白质组学方法,我们提供了一个全面的表征血淋巴蛋白质组成年苍蝇在细菌感染。我们检测并量化了几种已知免疫调节剂和效应物的丰度变化,包括多种抗菌肽、肽聚糖结合蛋白和丝氨酸蛋白酶。与先前发表的转录组学分析相比,发现与我们的数据集部分重叠,表明在感染时释放到血淋巴中的许多蛋白质可能不在转录水平上受到调节。其中,我们确定了一组肌肉来源的蛋白质在感染时释放到血淋巴中。最后,我们的分析表明,感染导致与线粒体呼吸相关的蛋白质丰度发生重大变化。这项研究揭示了大量以前未描述的可能参与免疫反应的蛋白质。
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引用次数: 0
VacQuant: a tool to quantify neurodegeneration and associated vacuolation in brain tissue. VacQuant:一种量化脑组织神经变性和相关空泡化的工具。
IF 2.2 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Fly
Pub Date : 2025-12-01 Epub Date: 2025-09-24 DOI: 10.1080/19336934.2025.2558387
Kate L Jordan, Colin D Veal, Charalambos P Kyriacou, Flaviano Giorgini

Neurodegenerative diseases are devastating conditions characterized by progressive cognitive decline with few available treatments. Neurodegeneration can be quantified in vertebrate and invertebrate models of disease by analysis of vacuolation - the formation of empty spaces within brain tissue. Previous approaches for quantifying this phenotype have required time-consuming methods such as manual counting and measuring of vacuole dimensions, which can be subjective. Here we describe VacQuant, a novel application that can be paired with existing machine learning software to automatically measure the area of vacuolation in brain tissue. Using Drosophila brain sections from tauopathy model flies, a well-described model of dementia-related neurodegeneration, we quantified a significant increase in brain vacuolation at several timepoints in adult flies with the aid of VacQuant. When compared with quantification by five blinded volunteers, the machine learning method positively correlated with their group average, confirming its accuracy and functionality. This automated method developed with VacQuant removes human bias and measurement variation, providing a consistent threshold for all brain sections and experiments. This automated pipeline will be particularly useful for high-throughput screening for genetic modifiers or therapeutic compounds in animal models of neurodegeneration.

神经退行性疾病是一种毁灭性的疾病,其特征是认知能力的进行性下降,而治疗方法却很少。神经退行性疾病可以通过分析空泡化(脑组织内空洞的形成)来量化脊椎动物和无脊椎动物的疾病模型。以前量化这种表型的方法需要耗时的方法,如手动计数和液泡尺寸的测量,这可能是主观的。在这里,我们描述了VacQuant,这是一种新的应用程序,可以与现有的机器学习软件配对,自动测量脑组织中空泡化的面积。使用来自脑损伤模型果蝇(一种描述良好的痴呆症相关神经变性模型)的果蝇脑切片,我们在VacQuant的帮助下量化了成年果蝇在几个时间点的脑空泡化显著增加。与五名盲法志愿者的量化结果相比,机器学习方法与他们的小组平均水平正相关,证实了其准确性和功能性。这种与VacQuant一起开发的自动化方法消除了人为偏差和测量差异,为所有脑切片和实验提供了一致的阈值。这种自动化的管道对于神经变性动物模型中基因修饰剂或治疗性化合物的高通量筛选特别有用。
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引用次数: 0
Experimental assessment of 3D-printed traps and chemical attractants for the collection of wild Drosophila melanogaster. 野生黑腹果蝇采集3d打印陷阱和化学引诱剂的实验评估。
IF 2.4 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Fly
Pub Date : 2025-12-01 Epub Date: 2025-05-14 DOI: 10.1080/19336934.2025.2502184
Alexandra H Keene-Snickers, Tillie J Dunham, Mark D Stenglein

Drosophila melanogaster, the common fruit fly, has been instrumental to our understanding of evolution, genetics and disease. There are benefits to studying these flies in the wild, including assessment of their naturally occurring microbiota. To facilitate efforts to catch wild D. melanogaster, we designed two fly traps and evaluated several candidate attractants. The first trap utilized a stable food substrate that can be used to catch live flies to establish new lab colonies. The second trap was designed to be reusable and easy to ship to enable the collection of flies over time from diverse locations. We evaluated several chemical attractants derived from banana and from marula fruit, which is the proposed ancestral food host of D. melanogaster. We found that wild flies were preferentially attracted to banana-based odorants over marula-derived ones. Overall, these traps and attractants represent an inexpensive and simple option for the collection of wild D. melanogaster and related species for sampling or colony establishment.

果蝇(Drosophila melanogaster)是一种常见的果蝇,它有助于我们理解进化、遗传和疾病。在野外研究这些苍蝇是有好处的,包括评估它们自然产生的微生物群。为了更好地捕捉野生黑腹田鼠,我们设计了两种捕蝇器,并对几种候选引诱剂进行了评价。第一个陷阱利用稳定的食物基质,可以用来捕捉活蝇,以建立新的实验室菌落。第二个陷阱被设计成可重复使用,易于运输,以便从不同的地点收集苍蝇。我们对几种从香蕉和马鲁拉果中提取的化学引诱剂进行了评价,马鲁拉果是黑腹扁蝽的祖先食物宿主。我们发现野生苍蝇更容易被香蕉气味所吸引,而不是来自马鲁拉的气味。总的来说,这些陷阱和引诱剂代表了一种廉价和简单的选择,用于收集野生黑腹田鼠和相关物种进行取样或建立殖民地。
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引用次数: 0
Effects of adaptation to crowded larval environment on the evolution of sperm competitive ability in males of Drosophila melanogaster. 适应拥挤的幼虫环境对雄性黑腹果蝇精子竞争能力进化的影响。
IF 2.4 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Fly
Pub Date : 2025-12-01 Epub Date: 2024-12-18 DOI: 10.1080/19336934.2024.2437204
Rohit Kapila, Komal Maggu, Neetika Ahlawat, Nagaraj Guru Prasad

Two of the most important environmental factors that affect the sperm competitive ability in males are the availability of resources and the socio-sexual environment. Numerous studies have investigated the individual effects of these factors, but their combined effect on the evolution of sperm competitive ability remains untested. A crowded larval environment is unique because it simultaneously affects the fitness of the organism through both resource availability and the socio-sexual environment. In this study, we used a set of four laboratory populations of D. melanogaster, evolved under a crowded larval environment for more than 165 generations and their respective controls to investigate how the sperm competitive ability of the males is affected by a single generation of larval crowding versus evolution under a crowded larval environment for more than 165 generations. Our results show that larval crowding negatively affects the sperm defence ability of males evolved in a crowded larval environment, while it has no effect on the sperm defence ability of control males. Additionally, larval crowding negatively impacts the sperm offence ability in both control and evolved populations. Males from populations adapted to a crowded larval environment exhibit lower sperm offence ability at an older age compared to control populations.

影响男性精子竞争能力的两个最重要的环境因素是资源的可用性和社会性环境。许多研究已经调查了这些因素的个体影响,但它们对精子竞争能力进化的综合影响仍未得到检验。拥挤的幼虫环境是独特的,因为它同时通过资源可用性和社会性环境影响生物体的适应性。本研究以在165代以上的拥挤幼虫环境下进化而来的4个黑腹田鼠实验种群为研究对象,研究了在165代以上的拥挤幼虫环境下,雄鼠精子竞争能力与雄鼠精子竞争能力的差异。结果表明,幼虫拥挤对在拥挤环境中进化的雄虫的精子防御能力有负面影响,而对对照雄虫的精子防御能力没有影响。此外,幼虫拥挤对控制种群和进化种群的精子攻击能力都有负面影响。与对照种群相比,适应了拥挤幼虫环境的种群中的雄性在老年时表现出较低的精子攻击能力。
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引用次数: 0
Open carry. 公开携带枪支。
IF 2.4 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Fly
Pub Date : 2025-12-01 Epub Date: 2025-05-21 DOI: 10.1080/19336934.2025.2503624
Howy Jacobs
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引用次数: 0
Enhancing drug administration in Drosophila melanogaster: a method for using solid dispersions for improved solubility and bioavailability. 加强黑腹果蝇的给药:一种使用固体分散体提高溶解度和生物利用度的方法。
IF 2.4 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Fly
Pub Date : 2025-12-01 Epub Date: 2025-04-25 DOI: 10.1080/19336934.2025.2497565
Sunayn Cheku, Blase Rokusek, Mahesh Pattabiraman, Kimberly A Carlson

Drosophila melanogaster is a widely used model organism for diseases such as Parkinson's disease, Alzheimer's disease, obesity, and diabetes. However, compound administration-based toxicological and behavioural studies on Drosophila have been hindered by technical difficulties associated with inefficient administration of hydrophobic compounds. This study illustrates a general method to make and distribute PEG 8000-based solid dispersions for three hydrophobic compounds, distearoylglycerol (DSG) geldanamycin (GA) and RU486 to D. melanogaster. The solid dispersions were validated, in vitro, using nuclear magnetic resonance spectroscopy (NMR), to have a higher aqueous solubility. The study also describes three different methods to administer the solid dispersions: subcutaneous injections, mixing in solid food, and the capillary feeder assay (CAFE). We show that the presence of 1% DMSO decreases survival, whereas PEG does not have an adverse effect. Lastly, we showed that the prepared PEG-RU486 formulation showed signs of enhanced bioavailability when compared to RU486 dissolved in ethanol. The methodology described in the study provides an easy and effective means to administer hydrophobic compounds to D. melanogaster using subcutaneous injections, CAFE assay, or by mixing it with solid food.

黑腹果蝇是一种被广泛应用于帕金森病、阿尔茨海默病、肥胖和糖尿病等疾病的模式生物。然而,基于化合物给药的果蝇毒理学和行为学研究一直受到技术困难的阻碍,这些困难与疏水化合物的低效给药有关。本研究阐述了一种基于PEG 8000的三种疏水性化合物二硬脂酰甘油(DSG)、格尔达霉素(GA)和RU486的固体分散体的制备和分布方法。固体分散体被验证,在体外,使用核磁共振波谱(NMR),具有较高的水溶性。该研究还描述了三种不同的固体分散体管理方法:皮下注射、混合固体食物和毛细管喂料法(CAFE)。我们发现,1% DMSO的存在会降低生存率,而PEG则没有不良影响。最后,我们发现制备的PEG-RU486制剂与溶解在乙醇中的RU486相比,具有提高生物利用度的迹象。本研究中描述的方法提供了一种简单有效的方法,通过皮下注射、CAFE测定或与固体食物混合,给药疏水化合物。
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引用次数: 0
Electrical silencing of dendritic arborization neurons rescues toxic polyglutamine-induced locomotion defect. 树突状树突神经元的电沉默修复毒性多谷氨酰胺诱导的运动缺陷。
IF 2.4 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Fly
Pub Date : 2025-12-01 Epub Date: 2025-06-16 DOI: 10.1080/19336934.2025.2519687
Hongyu Miao, Woo Jae Kim

This study investigates the effects of polyglutamine (polyQ) expansions on the locomotion of Drosophila larvae, focusing on the role of class IV dendritic arborization (da) neurons. PolyQ expansions are associated with neurodegenerative diseases like Huntington's disease, and Drosophila is a valuable model organism for studying these diseases due to its genetic tractability and short generation time. We found that expressing a polyQ protein in class IV da neurons caused significant locomotion deficits. Specifically, larvae with polyQ expression exhibited slower crawling speed and increased turn frequency, indicating impaired movement. The most intriguing finding of our study was that electrically silencing class IV da neurons completely rescued the locomotion deficits caused by polyQ expression. By expressing a potassium channel that makes the neurons less active, we effectively reversed the locomotion defects. This suggests that modulating the activity of these neurons could be a promising therapeutic approach for treating polyQ diseases. Our findings have significant implications for understanding polyQ diseases and developing new therapeutic approaches. By electrically silencing these neurons, we may be preventing the harmful effects of polyQ-induced cation channels, which are thought to disrupt cellular function. This opens up exciting possibilities for exploring electrical silencing as a potential treatment for polyQ diseases, offering hope for future therapies that target the underlying mechanisms of these devastating conditions.

本研究探讨了聚谷氨酰胺(polyQ)扩增对果蝇幼虫运动的影响,重点研究了IV类树突状乔木(da)神经元的作用。PolyQ扩增与亨廷顿氏病等神经退行性疾病有关,果蝇因其遗传易感性和世代时间短,是研究这些疾病的有价值的模式生物。我们发现在IV类da神经元中表达一种polyQ蛋白会导致显著的运动缺陷。具体而言,polyQ表达的幼虫爬行速度较慢,转身频率增加,表明运动受损。我们研究中最有趣的发现是电沉默IV类da神经元完全挽救了由polyQ表达引起的运动缺陷。通过表达钾离子通道使神经元不那么活跃,我们有效地逆转了运动缺陷。这表明调节这些神经元的活性可能是治疗多q疾病的一种有希望的治疗方法。我们的发现对理解多q疾病和开发新的治疗方法具有重要意义。通过电沉默这些神经元,我们可以防止多q诱导的阳离子通道的有害影响,这些阳离子通道被认为会破坏细胞功能。这为探索电沉默作为多q疾病的潜在治疗方法开辟了令人兴奋的可能性,为未来针对这些破坏性疾病的潜在机制的治疗提供了希望。
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引用次数: 0
Why just fly? 为什么只是飞?
IF 2.2 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Fly
Pub Date : 2025-12-01 Epub Date: 2025-11-24 DOI: 10.1080/19336934.2025.2593725
Peter K Dearden

Drosophila melanogaster is an incredible model system, providing tools and technologies that allow careful, effective, and reproducible research. This experimental approach, and the genetic tools and techniques available in Drosophila are desperately needed for the study of other insects, a hugely diverse group of huge importance to natural and productive ecosystems. For those of you with the skills and 'Drosophila mindset', studying other insects may help us understand diversity, improve the security of food production, and help avoid the current, worrying, insect apocalypse.

黑腹果蝇是一个令人难以置信的模型系统,它提供了工具和技术,使仔细、有效和可重复的研究成为可能。这种实验方法,以及在果蝇身上可用的遗传工具和技术,对于其他昆虫的研究是迫切需要的,这些昆虫是一个对自然和生产性生态系统非常重要的巨大多样化的群体。对于那些拥有技能和“果蝇思维”的人来说,研究其他昆虫可能有助于我们了解多样性,提高粮食生产的安全性,并有助于避免当前令人担忧的昆虫末日。
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引用次数: 0
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