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Biomarkers or biotargets? Using competition to lure cancer cells into evolutionary traps. 生物标志物还是生物靶标?利用竞争引诱癌细胞进入进化陷阱。
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2023-01-01 DOI: 10.1093/emph/eoad017
Anuraag Bukkuri, Frederick R Adler

Background and objectives: Cancer biomarkers provide information on the characteristics and extent of cancer progression and help inform clinical decision-making. However, they can also play functional roles in oncogenesis, from enabling metastases and inducing angiogenesis to promoting resistance to chemotherapy. The resulting evolution could bias estimates of cancer progression and lead to suboptimal treatment decisions.

Methodology: We create an evolutionary game theoretic model of cell-cell competition among cancer cells with different levels of biomarker production. We design and simulate therapies on top of this pre-existing game and examine population and biomarker dynamics.

Results: Using total biomarker as a proxy for population size generally underestimates chemotherapy efficacy and overestimates targeted therapy efficacy. If biomarker production promotes resistance and a targeted therapy against the biomarker exists, this dynamic can be used to set an evolutionary trap. After chemotherapy selects for a high biomarker-producing cancer cell population, targeted therapy could be highly effective for cancer extinction. Rather than using the most effective therapy given the cancer's current biomarker level and population size, it is more effective to 'overshoot' and utilize an evolutionary trap when the aim is extinction. Increasing cell-cell competition, as influenced by biomarker levels, can help prime and set these traps.

Conclusion and implications: Evolution of functional biomarkers amplify the limitations of using total biomarker levels as a measure of tumor size when designing therapeutic protocols. Evolutionarily enlightened therapeutic strategies may be highly effective, assuming a targeted therapy against the biomarker is available.

背景和目的:癌症生物标志物提供有关癌症进展的特征和程度的信息,并有助于为临床决策提供信息。然而,它们也可以在肿瘤发生中发挥功能作用,从促进转移和诱导血管生成到促进对化疗的抵抗。由此产生的进化可能会对癌症进展的估计产生偏差,并导致次优的治疗决策。方法:我们创建了一个进化博弈论模型,在不同水平的生物标志物生产的癌细胞之间的细胞竞争。我们在这个预先存在的游戏之上设计和模拟治疗方法,并检查人口和生物标志物动态。结果:使用总生物标志物作为群体规模的代表通常低估了化疗疗效,高估了靶向治疗疗效。如果生物标志物的产生促进了耐药性,并且存在针对生物标志物的靶向治疗,那么这种动态可以用来设置一个进化陷阱。在化疗选择高生物标志物产生的癌细胞群后,靶向治疗对癌症灭绝非常有效。考虑到癌症目前的生物标志物水平和种群规模,与其使用最有效的治疗方法,不如“超调”,在目标是灭绝的情况下利用进化陷阱。受生物标志物水平的影响,细胞间竞争的增加有助于启动和设置这些陷阱。结论和意义:功能性生物标志物的进化扩大了在设计治疗方案时使用总生物标志物水平作为肿瘤大小衡量标准的局限性。进化上开明的治疗策略可能是非常有效的,假设针对生物标志物的靶向治疗是可用的。
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引用次数: 0
Father absence and pubertal timing in Korean boys and girls. 韩国男孩和女孩的父亲缺失与青春期时间。
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2023-01-01 DOI: 10.1093/emph/eoad010
D Susie Lee, Hanna Semenchenko

Background and objectives: Pubertal timing is a key life history trait with long-term health consequences in both sexes. Evolutionary theory has guided extensive research on developmental influences, in particular growing up without a father, on earlier menarche. Far less is known whether a similar relationship exists for boys, especially beyond western contexts. We used longitudinal data from the nationally representative sample of Korean adolescents, which provided us with a unique opportunity for studying male puberty using a hitherto underutilized biomarker: age at first nocturnal ejaculation.

Methodology: We pre-registered and tested a prediction that growing up in father-absent households is associated with earlier puberty in both sexes. Large sample size (>6000) allowed testing the effect of father absence, which remains relatively uncommon in Korea, while adjusting for potential confounders using Cox proportional-hazard models.

Results: Self-reported age at first nocturnal ejaculation was on average 13.8 years, falling within the range known from other societies. Unlike previous findings mostly for white girls, we did not find evidence that Korean girls in father-absent households had a younger age at menarche. Boys in father-absent households reported having their first nocturnal ejaculation 3 months earlier on average, and the difference was evident before age 14.

Conclusion and implications: The association between father absence and pubertal timing appears sex- and age-dependent, and these differences may further interact with cultural norms regarding gender roles. Our study also highlights the utility of the recalled age of first ejaculation for male puberty research, which has lagged in both evolutionary biology and medicine.

背景和目的:青春期时间是一个重要的生活史特征,对两性的长期健康都有影响。进化论指导了关于发育影响的广泛研究,特别是在没有父亲的情况下长大,对月经初潮的影响。很少有人知道男孩是否也存在类似的关系,尤其是在西方国家之外。我们使用了韩国青少年全国代表性样本的纵向数据,这为我们提供了一个独特的机会来研究男性青春期,使用迄今未被充分利用的生物标志物:第一次夜间射精的年龄。方法:我们预先登记并测试了一个预测,即在没有父亲的家庭中长大与两性青春期提前有关。大样本量(>6000)允许测试父亲缺席的影响,这在韩国仍然相对不常见,同时使用Cox比例风险模型调整潜在的混杂因素。结果:自我报告的第一次夜间射精的平均年龄为13.8岁,在其他社会已知的范围内。与之前主要针对白人女孩的研究结果不同,我们没有发现证据表明,在没有父亲的家庭中,韩国女孩的月经初潮年龄更早。在没有父亲的家庭中,男孩第一次夜间射精的时间平均提前了3个月,这种差异在14岁之前就很明显了。结论和启示:父亲缺失与青春期发育时间之间的关系与性别和年龄有关,这些差异可能进一步与性别角色的文化规范相互作用。我们的研究还强调了首次射精年龄在男性青春期研究中的效用,这在进化生物学和医学上都是滞后的。
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引用次数: 0
No evidence that spice consumption is a cancer prevention mechanism in human populations. 没有证据表明食用香料是人类预防癌症的一种机制。
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2023-01-01 DOI: 10.1093/emph/eoac040
Antoine M Dujon, Aurélie Tasiemski, Pascal Pujol, Anthony Turpin, Beata Ujvari, Frédéric Thomas

Background: Why humans historically began to incorporate spices into their diets is still a matter of unresolved debate. For example, a recent study (Bromham et al. There is little evidence that spicy food in hot countries is an adaptation to reducing infection risk. Nat Hum Behav 2021;5:878-91.) did not support the most popular hypothesis that spice consumption was a practice favoured by selection in certain environments to reduce food poisoning, parasitic infections, and foodborne diseases.

Methods: Because several spices are known to have anticancer effects, we explored the hypothesis that natural selection and/or cultural evolution may have favoured spice consumption as an adaptive prophylactic response to reduce the burden of cancer pathology. We used linear models to investigate the potential relationship between age-standardized gastrointestinal cancer rates and spice consumption in 36 countries.

Results: Patterns of spice are not consistent with a cancer mitigation mechanism: the age-standardized rate of almost all gastrointestinal cancers was not related to spice consumption.

Conclusions: Direction other than foodborne pathogens and cancers should be explored to understand the health reasons, if any, why our ancestors developed a taste for spices.

背景:为什么人类历史上开始将香料纳入他们的饮食仍然是一个悬而未决的争论问题。例如,最近的一项研究(Bromham等人)。几乎没有证据表明炎热国家的辛辣食物是一种降低感染风险的适应方式。Nat Hum Behav 2021;5:878-91.)不支持最流行的假设,即香料消费是在某些环境中减少食物中毒、寄生虫感染和食源性疾病的选择所青睐的做法。方法:由于已知几种香料具有抗癌作用,我们探索了自然选择和/或文化进化可能倾向于食用香料作为减轻癌症病理负担的适应性预防反应的假设。我们使用线性模型调查36个国家中年龄标准化胃肠道癌症发病率与香料消费之间的潜在关系。结果:香料的模式与癌症缓解机制不一致:几乎所有胃肠道癌症的年龄标准化率与香料消费无关。结论:除了食源性病原体和癌症之外,还应该探索其他方向,以了解健康原因,如果有的话,为什么我们的祖先会对香料产生兴趣。
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引用次数: 0
The evolution of antibiotic resistance in an incurable and ultimately fatal infection: A retrospective case study. 抗生素耐药性在无法治愈和最终致命感染中的演变:回顾性病例研究。
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2023-01-01 DOI: 10.1093/emph/eoad012
Robert J Woods, Camilo Barbosa, Laura Koepping, Juan A Raygoza, Michael Mwangi, Andrew F Read

Background and objectives: The processes by which pathogens evolve within a host dictate the efficacy of treatment strategies designed to slow antibiotic resistance evolution and influence population-wide resistance levels. The aim of this study is to describe the underlying genetic and phenotypic changes leading to antibiotic resistance within a patient who died as resistance evolved to available antibiotics. We assess whether robust patterns of collateral sensitivity and response to combinations existed that might have been leveraged to improve therapy.

Methodology: We used whole-genome sequencing of nine isolates taken from this patient over 279 days of a chronic infection with Enterobacter hormaechei, and systematically measured changes in resistance against five of the most relevant drugs considered for treatment.

Results: The entirety of the genetic change is consistent with de novo mutations and plasmid loss events, without acquisition of foreign genetic material via horizontal gene transfer. The nine isolates fall into three genetically distinct lineages, with early evolutionary trajectories being supplanted by previously unobserved multi-step evolutionary trajectories. Importantly, although the population evolved resistance to all the antibiotics used to treat the infection, no single isolate was resistant to all antibiotics. Evidence of collateral sensitivity and response to combinations therapy revealed inconsistent patterns across this diversifying population.

Conclusions: Translating antibiotic resistance management strategies from theoretical and laboratory data to clinical situations, such as this, will require managing diverse population with unpredictable resistance trajectories.

背景和目的:病原体在宿主内进化的过程决定了旨在减缓抗生素耐药性进化和影响全人群耐药水平的治疗策略的有效性。本研究的目的是描述潜在的遗传和表型变化,导致抗生素耐药性的病人谁死于耐药性进化到现有的抗生素。我们评估是否存在可能用于改善治疗的侧枝敏感性和联合反应的稳健模式。方法:我们对这名慢性感染霍氏肠杆菌的患者进行了279天的全基因组测序,并系统地测量了对五种最相关的治疗药物的耐药性变化。结果:整个遗传变化与从头突变和质粒丢失事件一致,没有通过水平基因转移获得外源遗传物质。这9个分离株分为3个遗传上不同的谱系,早期的进化轨迹被以前未观察到的多步进化轨迹所取代。重要的是,尽管种群对用于治疗感染的所有抗生素都产生了耐药性,但没有一株菌株对所有抗生素都具有耐药性。侧枝敏感性和对联合治疗的反应的证据显示,在这个多样化的人群中,模式不一致。结论:将抗生素耐药性管理策略从理论和实验室数据转化为临床情况,将需要管理具有不可预测耐药轨迹的不同人群。
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引用次数: 0
Lower testosterone levels are associated with higher risk of death in men. 较低的睾丸激素水平与男性较高的死亡风险有关。
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2023-01-01 DOI: 10.1093/emph/eoac044
Michael P Muehlenbein, Jeffrey Gassen, Eric C Shattuck, Corey S Sparks

Background and objectives: Testosterone plays an important role in regulating male development, reproduction and health. Declining levels across the lifespan may reflect, or even contribute to, chronic disease and mortality in men.

Methodology: Relationships between testosterone levels and male mortality were analyzed using data from multiple samples of the cross-sectional National Health and Nutrition Examination Survey (n = 10 225). Target outcomes included known deaths from heart disease, malignant neoplasms, chronic lower respiratory diseases, cerebrovascular diseases, Alzheimer's disease, diabetes mellitus, influenza and pneumonia, kidney diseases, and accidents or unintentional injuries.

Results: Results of discrete-time hazard models revealed that lower levels of testosterone were related to higher mortality for the majority of disease categories in either an age-dependent or age-independent fashion. Analysis of all-cause mortality-which included deaths from any known disease-also revealed greater general risk for those with lower testosterone levels. For most disease categories, the hazard associated with low testosterone was especially evident at older ages when mortality from that particular ailment was already elevated. Notably, testosterone levels were not related to mortality risk for deaths unrelated to chronic disease (i.e. accidents and injuries).

Conclusions and implications: While the causal direction of relationships between testosterone and mortality risk remains unclear, these results may reflect the decline in testosterone that accompanies many disease states. Accordingly, the relationship between testosterone and male mortality may be indirect; ill individuals are expected to have both lower testosterone and higher mortality risk.

背景和目的:睾酮在调节男性发育、生殖和健康方面起着重要作用。在整个生命周期中不断下降的水平可能反映,甚至是导致男性慢性疾病和死亡率的原因。方法:使用横断面全国健康与营养检查调查(n = 10 225)的多个样本数据,分析睾丸激素水平与男性死亡率之间的关系。目标结果包括已知的因心脏病、恶性肿瘤、慢性下呼吸道疾病、脑血管疾病、阿尔茨海默病、糖尿病、流感和肺炎、肾脏疾病以及事故或意外伤害导致的死亡。结果:离散时间风险模型的结果显示,睾酮水平较低与大多数疾病类别的高死亡率相关,无论是年龄依赖还是年龄独立。对全因死亡率(包括任何已知疾病导致的死亡)的分析也显示,睾酮水平较低的人总体风险更高。对于大多数疾病类别,与低睾丸激素相关的危害在老年人中尤其明显,因为这种疾病的死亡率已经升高。值得注意的是,睾酮水平与与慢性疾病(即事故和伤害)无关的死亡风险无关。结论和意义:虽然睾酮与死亡风险之间的因果关系尚不清楚,但这些结果可能反映了许多疾病状态下睾酮水平的下降。因此,睾酮与男性死亡率之间的关系可能是间接的;患病的人睾酮水平较低,死亡风险较高。
{"title":"Lower testosterone levels are associated with higher risk of death in men.","authors":"Michael P Muehlenbein,&nbsp;Jeffrey Gassen,&nbsp;Eric C Shattuck,&nbsp;Corey S Sparks","doi":"10.1093/emph/eoac044","DOIUrl":"https://doi.org/10.1093/emph/eoac044","url":null,"abstract":"<p><strong>Background and objectives: </strong>Testosterone plays an important role in regulating male development, reproduction and health. Declining levels across the lifespan may reflect, or even contribute to, chronic disease and mortality in men.</p><p><strong>Methodology: </strong>Relationships between testosterone levels and male mortality were analyzed using data from multiple samples of the cross-sectional National Health and Nutrition Examination Survey (<i>n</i> = 10 225). Target outcomes included known deaths from heart disease, malignant neoplasms, chronic lower respiratory diseases, cerebrovascular diseases, Alzheimer's disease, diabetes mellitus, influenza and pneumonia, kidney diseases, and accidents or unintentional injuries.</p><p><strong>Results: </strong>Results of discrete-time hazard models revealed that lower levels of testosterone were related to higher mortality for the majority of disease categories in either an age-dependent or age-independent fashion. Analysis of all-cause mortality-which included deaths from any known disease-also revealed greater general risk for those with lower testosterone levels. For most disease categories, the hazard associated with low testosterone was especially evident at older ages when mortality from that particular ailment was already elevated. Notably, testosterone levels were not related to mortality risk for deaths unrelated to chronic disease (i.e. accidents and injuries).</p><p><strong>Conclusions and implications: </strong>While the causal direction of relationships between testosterone and mortality risk remains unclear, these results may reflect the decline in testosterone that accompanies many disease states. Accordingly, the relationship between testosterone and male mortality may be indirect; ill individuals are expected to have both lower testosterone and higher mortality risk.</p>","PeriodicalId":12156,"journal":{"name":"Evolution, Medicine, and Public Health","volume":"11 1","pages":"30-40"},"PeriodicalIF":3.7,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9938530/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9192307","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Disgusting odors trigger the oral immune system. 恶心的气味会触发口腔免疫系统。
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2023-01-01 DOI: 10.1093/emph/eoac042
Stephanie Anja Juran, Arnaud Tognetti, Johan N Lundström, Lalit Kumar, Richard J Stevenson, Mats Lekander, Mats J Olsson

Recent research has characterized the behavioral defense against disease. In particular the detection of sickness cues, the adaptive reactions (e.g. avoidance) to these cues and the mediating role of disgust have been the focus. A presumably important but less investigated part of a behavioral defense is the immune system response of the observer of sickness cues. Odors are intimately connected to disease and disgust, and research has shown how olfaction conveys sickness cues in both animals and humans. This study aims to test whether odorous sickness cues (i.e. disgusting odors) can trigger a preparatory immune response in humans. We show that subjective and objective disgust measures, as well as TNFα levels in saliva increased immediately after exposure to disgusting odors in a sample of 36 individuals. Altogether, these results suggest a collaboration between behavioral mechanisms of pathogen avoidance in olfaction, mediated by the emotion of disgust, and mechanisms of pathogen elimination facilitated by inflammatory mediators. Disgusting stimuli are associated with an increased risk of infection. We here test whether disgusting odors, can trigger an immune response in the oral cavity. The results indicate an increase level of TNFα in the saliva. This supports that disease cues can trigger a preparatory response in the oral cavity.

最近的研究表明了对疾病的行为防御。特别是疾病线索的检测,对这些线索的适应性反应(如回避)和厌恶的中介作用一直是重点。行为防御中一个可能很重要但研究较少的部分是观察者对疾病线索的免疫系统反应。气味与疾病和厌恶密切相关,研究表明,动物和人类的嗅觉都能传达疾病的线索。这项研究旨在测试气味疾病线索(即恶心的气味)是否能触发人类的预备免疫反应。我们发现,在36个人的样本中,主观和客观的厌恶测量以及唾液中的tnf - α水平在暴露于令人厌恶的气味后立即增加。总之,这些结果表明,在嗅觉中,由厌恶情绪介导的病原体回避行为机制与炎症介质促进的病原体消除机制之间存在协作。令人作呕的刺激与感染风险增加有关。我们在这里测试恶心的气味,是否能引发口腔的免疫反应。结果表明,唾液中TNFα水平升高。这支持疾病提示可以触发口腔中的预备反应。
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引用次数: 2
COVID-19 and Evolution, Medicine, and Public Health. COVID-19及其演变、医学和公共卫生。
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2023-01-01 DOI: 10.1093/emph/eoad002
Charles L Nunn
According to the World Health Organization, 6.7 million people have died from COVID19 as of the start of 2023. These deaths are tragic with many societal ramifications. For example, more than 10 million children have lost caregivers globally through 1 May 2022 [1], while many others have suffered dramatic losses in educational attainment [2]. At times, the pandemic has overwhelmed healthcare services that have resulted in additional non-COVID death and suffering. COVID-19 has also caused sharp declines in mental health, particularly among children and adolescents [3, 4]. Mental disorders, such as depression and anxiety, are often debilitating and long-lasting, thus contributing greatly to years lived with disability. Some bright spots have also occurred, including the marked reduction in deaths due to influenza in the first year of the pandemic due to masking and social isolation and the rapid rollout of vaccines using new technologies such as mRNA vaccines, which offer great promise in battling other infectious diseases. One lesson from the pandemic is the importance of interdisciplinary approaches for addressing complex problems. We cannot control a viral pandemic with just virology. We need epidemiologists, engineers, sociologists, political scientists, historians, medical doctors, economists, statisticians, anthropologists, mathematicians and geographers (among others!) to comprehend the interconnections of human behavior, disease transmission, government interventions, global transport and trade, and the production and distribution of vaccines and treatments. Evolutionary biology is another field that has been crucial for making sense of the COVID-19 pandemic. Examples of evolutionary biology’s importance are many, including identifying selective pressures that lead to the rise of new variants of concern, understanding human responses to disease in relation to past evolutionary pressures from other infectious diseases, and investigating the breadth of hosts that coronaviruses infect and the ecological context of their spillover among hosts. In many cases, these evolutionary perspectives are also crucial to mitigation efforts. For example, phylogenetic approaches can reveal the origins of a new human pathogen from other species, helping guide surveillance efforts in wildlife or domesticated animals, while also revealing transmission pathways among human populations. In the early months of the pandemic, for example, many of us spent hours on NextStrain (https:// nextstrain.org/) examining the most up-to-date phylogenies of SARS-CoV-2 to help make sense of its global movement. We can see the breadth of these evolutionary perspectives on COVID-19 in the pages of Evolution, Medicine, and Public Health (EMPH). So far, EMPH has published 24 scientific articles EDITORIAL BY INVITATION ONLY
{"title":"COVID-19 and <i>Evolution, Medicine, and Public Health</i>.","authors":"Charles L Nunn","doi":"10.1093/emph/eoad002","DOIUrl":"https://doi.org/10.1093/emph/eoad002","url":null,"abstract":"According to the World Health Organization, 6.7 million people have died from COVID19 as of the start of 2023. These deaths are tragic with many societal ramifications. For example, more than 10 million children have lost caregivers globally through 1 May 2022 [1], while many others have suffered dramatic losses in educational attainment [2]. At times, the pandemic has overwhelmed healthcare services that have resulted in additional non-COVID death and suffering. COVID-19 has also caused sharp declines in mental health, particularly among children and adolescents [3, 4]. Mental disorders, such as depression and anxiety, are often debilitating and long-lasting, thus contributing greatly to years lived with disability. Some bright spots have also occurred, including the marked reduction in deaths due to influenza in the first year of the pandemic due to masking and social isolation and the rapid rollout of vaccines using new technologies such as mRNA vaccines, which offer great promise in battling other infectious diseases. One lesson from the pandemic is the importance of interdisciplinary approaches for addressing complex problems. We cannot control a viral pandemic with just virology. We need epidemiologists, engineers, sociologists, political scientists, historians, medical doctors, economists, statisticians, anthropologists, mathematicians and geographers (among others!) to comprehend the interconnections of human behavior, disease transmission, government interventions, global transport and trade, and the production and distribution of vaccines and treatments. Evolutionary biology is another field that has been crucial for making sense of the COVID-19 pandemic. Examples of evolutionary biology’s importance are many, including identifying selective pressures that lead to the rise of new variants of concern, understanding human responses to disease in relation to past evolutionary pressures from other infectious diseases, and investigating the breadth of hosts that coronaviruses infect and the ecological context of their spillover among hosts. In many cases, these evolutionary perspectives are also crucial to mitigation efforts. For example, phylogenetic approaches can reveal the origins of a new human pathogen from other species, helping guide surveillance efforts in wildlife or domesticated animals, while also revealing transmission pathways among human populations. In the early months of the pandemic, for example, many of us spent hours on NextStrain (https:// nextstrain.org/) examining the most up-to-date phylogenies of SARS-CoV-2 to help make sense of its global movement. We can see the breadth of these evolutionary perspectives on COVID-19 in the pages of Evolution, Medicine, and Public Health (EMPH). So far, EMPH has published 24 scientific articles EDITORIAL BY INVITATION ONLY","PeriodicalId":12156,"journal":{"name":"Evolution, Medicine, and Public Health","volume":"11 1","pages":"41-43"},"PeriodicalIF":3.7,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9993055/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"9642505","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Non-pharmaceutical interventions and the emergence of pathogen variants. 非药物干预和病原体变种的出现。
IF 3.3 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2022-12-19 eCollection Date: 2023-01-01 DOI: 10.1093/emph/eoac043
Ben Ashby, Cameron A Smith, Robin N Thompson

Non-pharmaceutical interventions (NPIs), such as social distancing and contact tracing, are important public health measures that can reduce pathogen transmission. In addition to playing a crucial role in suppressing transmission, NPIs influence pathogen evolution by mediating mutation supply, restricting the availability of susceptible hosts, and altering the strength of selection for novel variants. Yet it is unclear how NPIs might affect the emergence of novel variants that are able to escape pre-existing immunity (partially or fully), are more transmissible or cause greater mortality. We analyse a stochastic two-strain epidemiological model to determine how the strength and timing of NPIs affect the emergence of variants with similar or contrasting life-history characteristics to the wild type. We show that, while stronger and timelier NPIs generally reduce the likelihood of variant emergence, it is possible for more transmissible variants with high cross-immunity to have a greater probability of emerging at intermediate levels of NPIs. This is because intermediate levels of NPIs allow an epidemic of the wild type that is neither too small (facilitating high mutation supply), nor too large (leaving a large pool of susceptible hosts), to prevent a novel variant from becoming established in the host population. However, since one cannot predict the characteristics of a variant, the best strategy to prevent emergence is likely to be an implementation of strong, timely NPIs.

非药物干预措施(NPIs),如拉开社会距离和追踪接触者,是重要的公共卫生措施,可以减少病原体的传播。除了在抑制传播方面发挥关键作用外,非药物干预措施还通过调节变异供应、限制易感宿主的可用性以及改变对新型变种的选择强度来影响病原体的进化。然而,目前还不清楚NPI会如何影响新型变种的出现,这些变种能够(部分或完全)逃避已有的免疫力,传播性更强或导致更高的死亡率。我们分析了一个随机双菌株流行病学模型,以确定 NPI 的强度和时间如何影响与野生型具有相似或相反生活史特征的变异体的出现。我们的研究表明,虽然较强和较及时的 NPI 通常会降低变异体出现的可能性,但具有较高交叉免疫力的传染性较强的变异体有可能在中等水平的 NPI 下出现的概率更大。这是因为中等水平的 NPIs 可以使野生型的流行范围既不会太小(有利于提供大量变异),也不会太大(留下大量易感宿主),从而阻止新型变异体在宿主群体中建立起来。然而,由于我们无法预测变异体的特征,防止变异体出现的最佳策略可能是实施强有力的、及时的 NPIs。
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引用次数: 0
Sound reasons for unsound sleep: Comparative support for the sentinel hypothesis in industrial and nonindustrial groups. 不健康睡眠的合理原因:在工业和非工业群体中对哨兵假说的比较支持。
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2022-11-22 eCollection Date: 2023-01-01 DOI: 10.1093/emph/eoac039
Leela McKinnon, Eric C Shattuck, David R Samson

Background and objectives: Sleep is a vulnerable state in which individuals are more susceptible to threat, which may have led to evolved mechanisms for increasing safety. The sentinel hypothesis proposes that brief awakenings during sleep may be a strategy for detecting and responding to environmental threats. Observations of sleep segmentation and group sentinelization in hunter-gatherer and small-scale communities support this hypothesis, but to date it has not been tested in comparisons with industrial populations characterized by more secure sleep environments.

Methodology: Here, we compare wake after sleep onset (WASO), a quantitative measure of nighttime awakenings, between two nonindustrial and two industrial populations: Hadza hunter-gatherers (n = 33), Malagasy small-scale agriculturalists (n = 38), and Hispanic (n = 1,531) and non-Hispanic White (NHW) (n = 347) Americans. We compared nighttime awakenings between these groups using actigraphically-measured sleep data. We fit linear models to assess whether WASO varies across groups, controlling for sex and age.

Results: We found that WASO varies significantly by group membership and is highest in Hadza (2.44 h) and Malagasy (1.93 h) and lowest in non-Hispanic Whites (0.69 h). Hispanics demonstrate intermediate WASO (0.86 h), which is significantly more than NHW participants. After performing supplementary analysis within the Hispanic sample, we found that WASO is significantly and positively associated with increased perception of neighborhood violence.

Conclusions and implications: Consistent with principles central to evolutionary medicine, we propose that evolved mechanisms to increase vigilance during sleep may now be mismatched with relatively safer environments, and in part responsible for driving poor sleep health.

背景和目的:睡眠是一种脆弱的状态,在这种状态下,个体更容易受到威胁,这可能导致进化出提高安全性的机制。哨兵假说认为,睡眠中的短暂觉醒可能是检测和应对环境威胁的一种策略。在狩猎采集者和小规模社区中观察到的睡眠分段和群体哨兵化现象支持了这一假说,但迄今为止,这一假说还没有在与具有更安全睡眠环境特征的工业人群的比较中得到验证:方法:在此,我们比较了两种非工业人群和两种工业人群的夜间觉醒情况:哈德扎狩猎采集者(n = 33)、马达加斯加小农(n = 38)以及西班牙裔美国人(n = 1,531 )和非西班牙裔白人(NHW)(n = 347)。我们使用动图测量的睡眠数据比较了这些群体的夜间觉醒情况。在控制性别和年龄的情况下,我们拟合了线性模型来评估不同群体的 WASO 是否存在差异:我们发现,不同群体成员的 WASO 有显著差异,哈德扎人(2.44 小时)和马达加斯加人(1.93 小时)的 WASO 最高,非西班牙裔白人(0.69 小时)的 WASO 最低。西班牙裔人的 WASO 处于中等水平(0.86 小时),明显高于非西班牙裔白人。在对西班牙裔样本进行补充分析后,我们发现,WASO 与邻里暴力感知的增加呈显著正相关:与进化医学的核心原则一致,我们认为,进化出的提高睡眠警觉性的机制现在可能与相对更安全的环境不匹配,并在一定程度上导致了睡眠健康状况不佳。
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引用次数: 0
Antigenic evolution of SARS-CoV-2 in immunocompromised hosts. 免疫力低下的宿主体内 SARS-CoV-2 的抗原进化。
IF 3.3 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2022-11-11 eCollection Date: 2023-01-01 DOI: 10.1093/emph/eoac037
Cameron A Smith, Ben Ashby

Objectives/aims: Prolonged infections of immunocompromised individuals have been proposed as a crucial source of new variants of SARS-CoV-2 during the COVID-19 pandemic. In principle, sustained within-host antigenic evolution in immunocompromised hosts could allow novel immune escape variants to emerge more rapidly, but little is known about how and when immunocompromised hosts play a critical role in pathogen evolution.

Materials and methods: Here, we use a simple mathematical model to understand the effects of immunocompromised hosts on the emergence of immune escape variants in the presence and absence of epistasis.

Conclusions: We show that when the pathogen does not have to cross a fitness valley for immune escape to occur (no epistasis), immunocompromised individuals have no qualitative effect on antigenic evolution (although they may accelerate immune escape if within-host evolutionary dynamics are faster in immunocompromised individuals). But if a fitness valley exists between immune escape variants at the between-host level (epistasis), then persistent infections of immunocompromised individuals allow mutations to accumulate, therefore, facilitating rather than simply speeding up antigenic evolution. Our results suggest that better genomic surveillance of infected immunocompromised individuals and better global health equality, including improving access to vaccines and treatments for individuals who are immunocompromised (especially in lower- and middle-income countries), may be crucial to preventing the emergence of future immune escape variants of SARS-CoV-2.

目的/宗旨:在 COVID-19 大流行期间,免疫力低下者的长期感染被认为是 SARS-CoV-2 新变种的重要来源。原则上讲,免疫缺陷宿主持续的宿主内抗原进化可使新型免疫逃逸变异体更快地出现,但人们对免疫缺陷宿主如何以及何时在病原体进化中发挥关键作用知之甚少。材料与方法:在此,我们使用一个简单的数学模型来了解免疫缺陷宿主在存在和不存在表观遗传的情况下对免疫逃逸变异体出现的影响:我们的研究表明,当病原体不需要越过免疫逃逸的适存谷(无外显率)时,免疫缺陷个体对抗原进化没有质的影响(尽管如果免疫缺陷个体的宿主内进化动态更快,它们可能会加速免疫逃逸)。但是,如果免疫逃逸变体之间在宿主间水平(表观遗传)存在适存谷,那么免疫力低下个体的持续感染就会使突变累积,从而促进而不仅仅是加速抗原进化。我们的研究结果表明,更好地对受感染的免疫力低下者进行基因组监测,以及更好地实现全球健康平等,包括改善免疫力低下者(尤其是中低收入国家的免疫力低下者)获得疫苗和治疗的机会,对于防止未来出现 SARS-CoV-2 的免疫逃逸变种可能至关重要。
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Evolution, Medicine, and Public Health
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