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Birth and household exposures are associated with changes to skin bacterial communities during infancy 出生和家庭接触与婴儿期皮肤细菌群落的变化有关
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2024-09-17 DOI: 10.1093/emph/eoae023
Melissa B Manus, Maria Luisa Savo Sardaro, Omolola Dada, Maya Davis, Melissa R Romoff, Stephanie G Torello, Esther Ubadigbo, Rebecca C Wu, Maria Gloria Dominguez-Bello, Melissa K Melby, Emily S Miller, Katherine R Amato
Microbial exposures during infancy shape the development of the microbiome, the collection of microbes living in and on the body, which in turn directs immune system training. Newborns acquire a substantial quantity of microbes during birth and throughout infancy via exposure to microbes in the physical and social environment. Alterations to early life microbial environments may give rise to mismatches, where environmental, cultural, and behavioral changes that outpace the body’s adaptive responses can lead to adverse health outcomes, particularly those related to microbiome development and immune system regulation. This study explored the development of the skin microbiome among infants born in Chicago, USA. We collected skin swab microbiome samples from 22 mother-infant dyads during the first 48 hours of life and again at six weeks postpartum. Mothers provided information about social environments and hygiene behaviors that may impact infants’ microbial exposures. Analysis of 16S rRNA bacterial gene sequencing data revealed correlations between infant skin bacterial abundance shortly after birth and factors such as antibiotic exposure and receiving a bath in the hospital. The composition of the infant microbiome at six weeks of age was associated with interactions with caregivers and infant feeding practices. We also found shifts in maternal skin microbiomes that may reflect increased hygiene practices in the hospital. Our data suggest that factors related to the birth and household environment can impact the development of infant skin microbiomes and point to practices that may produce mismatches for the infant microbiome and immune system.
婴儿期接触的微生物会影响微生物组的发育,微生物组是生活在体内和体表的微生物的集合,反过来又会指导免疫系统的训练。新生儿在出生时和整个婴儿期都会接触到物理和社会环境中的微生物,从而获得大量微生物。生命早期微生物环境的改变可能会导致错配,即环境、文化和行为的变化超过机体的适应性反应,从而导致不良的健康后果,尤其是与微生物组发育和免疫系统调节相关的后果。本研究探讨了在美国芝加哥出生的婴儿皮肤微生物组的发育情况。我们在婴儿出生后的 48 小时内收集了 22 对母婴的皮肤拭子微生物组样本,并在产后六周再次收集了样本。母亲提供了可能影响婴儿微生物暴露的社会环境和卫生行为的信息。对 16S rRNA 细菌基因测序数据的分析表明,婴儿出生后不久皮肤细菌数量与抗生素暴露和在医院洗澡等因素之间存在相关性。六周大时婴儿微生物组的组成与护理人员的互动和婴儿喂养方式有关。我们还发现母体皮肤微生物组的变化可能反映了医院卫生习惯的增加。我们的数据表明,与出生和家庭环境有关的因素会影响婴儿皮肤微生物组的发育,并指出了可能对婴儿微生物组和免疫系统产生不匹配的做法。
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引用次数: 0
Low haemoglobin in arduous seasons is associated with reduced chance of ovulation among women living in the Bolivian altiplano 艰苦季节血红蛋白低与玻利维亚高原妇女排卵机会减少有关
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2024-09-11 DOI: 10.1093/emph/eoae022
Rose Stevens, Alexandra Alvergne, Virginia J Vitzthum
Background and objectives Female reproductive function flexibly responds to ecological variation in energy availability, but the roles of other ecologically limited resources, such as iron, remain poorly understood. This analysis investigates whether haemoglobin associates with investment in reproductive function in a rural natural fertility population living in the Bolivian altiplano. Methodology We conducted a cross-sectional secondary analysis of prospectively collected biomarker and sociodemographic data, comprising 152 menstrual cycles from 96 non-contracepting women living at 3800m altitude. Multivariable multilevel models were used to investigate (1) whether haemoglobin concentration is associated with ecological variation in subsistence strategy and seasonal conditions, and (2) whether haemoglobin concentration is associated with the occurrence of ovulation and/or the concentration of luteal progesterone, two biomarkers of current investment in reproduction. Results Haemoglobin concentrations were lower in arduous seasons among those women more dependent on traditional agropastoral subsistence strategies (β = -0.42, 95% CI: -0.80 to -0.04, p = 0.032). During more arduous seasons, a 1 standard deviation increase in haemoglobin was associated with an over 3-fold increase in the odds of ovulation after adjusting for body fat, breastfeeding status, and age (adjusted odds ratio = 3.27, 95% CI: 1.10 to 9.27, p = 0.033). Conclusions and implications When conditions are relatively harsh and may be expected to improve, low haemoglobin levels are associated with lower current investment in reproduction and reduced fecundity. These results support the role of iron, independent of energy stores, as a limiting resource in modulating reproductive trade-offs.
背景和目的 女性生殖功能可灵活应对能量供应的生态变化,但对铁等其他生态有限资源的作用仍知之甚少。本分析调查了生活在玻利维亚高原的农村自然生育人群中的血红蛋白是否与生殖功能投资有关。方法 我们对前瞻性收集的生物标志物和社会人口学数据进行了横断面二次分析,这些数据包括生活在海拔 3800 米地区的 96 名未避孕妇女的 152 个月经周期。采用多变量多层次模型研究:(1) 血红蛋白浓度是否与生存策略和季节条件的生态变化有关;(2) 血红蛋白浓度是否与排卵发生率和/或黄体孕酮浓度(当前生殖投资的两个生物标志物)有关。结果 在较为依赖传统农牧业生存策略的妇女中,血红蛋白浓度在艰苦季节较低(β = -0.42,95% CI:-0.80 至 -0.04,p = 0.032)。在更艰苦的季节,血红蛋白每增加 1 个标准差,排卵几率就会增加 3 倍多(调整后的几率比 = 3.27,95% CI:1.10 至 9.27,p = 0.033)。结论与启示 在条件相对恶劣且有望改善的情况下,血红蛋白水平低与当前生殖投资减少和受精率降低有关。这些结果支持铁作为一种限制性资源在调节生殖权衡中的作用,而与能量储存无关。
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引用次数: 0
Diagnostic testing and the evolution of detection avoidance by pathogens 诊断检测和病原体逃避检测的演变
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2024-08-27 DOI: 10.1093/emph/eoae018
Jason Wood, Ben Ashby
Diagnostic testing is a key tool in the fight against many infectious diseases. The emergence of pathogen variants that are able to avoid detection by diagnostic testing therefore represents a key challenge for public health. In recent years, variants for multiple pathogens have emerged which escape diagnostic testing, including mutations in Plasmodium falciparum (malaria), Chlamydia trachomatis (chlamydia) and SARS-CoV-2 (COVID-19). However, little is currently known about when and the extent to which diagnostic test escape will evolve. Here we use a mathematical model to explore how the frequency of diagnostic testing, combined with variation in compliance and efficacy of isolating, together drive the evolution of detection avoidance. We derive key thresholds under which a testing regime will (i) select for diagnostic test avoidance, or (ii) drive the pathogen extinct. Crucially, we show that imperfect compliance with diagnostic testing regimes can have marked effects on selection for detection avoidance, and consequently, for disease control. Yet somewhat counterintuitively, we find that an intermediate level of testing can select for the highest level of detection avoidance. Our results, combined with evidence from various pathogens, demonstrate that the evolution of diagnostic testing avoidance should be carefully considered when designing diagnostic testing regimes.
诊断检测是防治许多传染病的关键工具。因此,能够逃避诊断检测的病原体变异体的出现是公共卫生面临的一项重大挑战。近年来,多种病原体出现了可逃避诊断检测的变种,包括恶性疟原虫(疟疾)、沙眼衣原体(衣原体)和 SARS-CoV-2 (COVID-19)的变异。然而,目前人们对诊断检测逃逸的时间和程度知之甚少。在此,我们使用一个数学模型来探讨诊断检测的频率与依从性和隔离效果的变化如何共同推动检测规避的演变。我们得出了一些关键阈值,在这些阈值下,检测制度将(i)选择逃避诊断检测,或(ii)导致病原体灭绝。最重要的是,我们表明,不完全遵守诊断检测制度会对避免检测的选择产生显著影响,进而影响疾病控制。然而,与直觉相反的是,我们发现中等水平的检测可以选择最高水平的检测规避。我们的研究结果以及来自各种病原体的证据表明,在设计诊断检测制度时,应仔细考虑避免诊断检测的演变。
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引用次数: 0
The Elephant and the Spandrel 大象和壁画
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2024-08-26 DOI: 10.1093/emph/eoae019
Zachary T Compton, J Arvid Ågren, Andriy Marusyk, Aurora M Nedelcu
Comparative oncology has made great strides in identifying patterns of cancer prevalence and risk across the tree of life. Such studies have often centered on elucidating the evolution of cancer suppression mechanisms, especially in large and/or long-lived animals such as elephants, in which cancer risk is assumed to exert a strong selective pressure. There is a worry, however, that we are overinterpreting these conclusions, as the deep evolutionary origins of these mechanisms and their involvement in cancer-unrelated functions suggest that the preeminent functions of the identified mechanisms may be unrelated to cancer. Instead, cancer suppression may be an evolutionary byproduct, or “spandrel”, of selection acting on development and somatic maintenance. Here, we highlight the importance of development and somatic maintenance as the underlying axis of natural selection. We argue that by shifting the focus of study from cancer suppression to development and somatic maintenance as the ultimate cause, we can gain a deeper understanding of the evolutionary pressures that shaped the mechanisms responsible for the observed variation in cancer prevalence across species.
比较肿瘤学在确定整个生命树的癌症流行和风险模式方面取得了长足进步。这些研究通常侧重于阐明癌症抑制机制的进化,尤其是在大象等大型和/或长寿动物中,因为在这些动物中,癌症风险被认为会产生强大的选择性压力。然而,有人担心我们过度解读了这些结论,因为这些机制的深层进化起源及其参与与癌症无关的功能表明,已发现机制的主要功能可能与癌症无关。相反,癌症抑制可能是进化的副产品,或者说是对发育和躯体维持起作用的选择的 "附属品"。在此,我们强调发育和体细胞维持作为自然选择的基本轴心的重要性。我们认为,通过将研究重点从癌症抑制转移到作为最终原因的发育和躯体维持上,我们可以更深入地了解形成不同物种癌症发病率差异机制的进化压力。
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引用次数: 0
Coping with extreme heat: current exposure and implications for the future 应对极端高温:当前面临的问题及对未来的影响
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2024-08-22 DOI: 10.1093/emph/eoae015
Chrles A Weitz
A preview of how effective behavioral, biological, and technological responses might be in the future, when outdoor conditions will be at least 2oC hotter than current levels, is available today from studies of individuals already living in extreme heat These studies indicate that people commonly experience heat conditions that are substantially different from those recorded outdoors at fixed weather stations. In areas where high temperatures are common – particularly those in the hot and humid tropics – several studies report that indoor temperatures in low-income housing can be significantly hotter than those outdoors. A case study indicates that daily indoor heat indexes in almost all the 123 slum dwellings monitored in Kolkata during a summer were above 41oC (106oF) for at least an hour. Economic constraints make it unlikely that technological fixes, such as air conditioners, will remedy conditions like these – now or in the future. People without access to air conditioning will have to rely on behavioral adjustments and/or biological/physiological acclimatization. One important unknown is whether individuals who have lived their entire lives in hot environments without air conditioning possess natural levels of acclimatization greater than those indicated by controlled laboratory studies. Answering questions about the future will require more studies of individual experienced heat conditions, more information on indoor versus outdoor heat conditions, and a greater understanding of the behavioral and biological adjustments made by people living today in extremely hot conditions.
这些研究表明,人们通常经历的高温条件与固定气象站记录的室外高温条件大相径庭。在高温频发的地区,尤其是湿热的热带地区,一些研究报告指出,低收入住房的室内温度可能比室外温度高出很多。一项案例研究表明,一个夏天,在加尔各答监测到的 123 个贫民窟中,几乎所有贫民窟的每日室内热指数至少有一个小时超过 41 摄氏度(106 华氏度)。由于经济上的限制,无论是现在还是将来,空调等技术补救措施都不可能改善这些状况。无法使用空调的人们将不得不依靠行为调整和/或生物/生理适应。一个重要的未知数是,在没有空调的炎热环境中生活了一辈子的人,其自然适应能力是否比实验室对照研究显示的更强。要回答有关未来的问题,需要对个人所经历的高温条件进行更多的研究,提供更多有关室内和室外高温条件的信息,并进一步了解如今生活在极端高温条件下的人们在行为和生理上所做的调整。
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引用次数: 0
Commemorating the monkey bars, catalyst of debate at the intersection of human evolutionary biology and public health 纪念猴栏,人类进化生物学与公共卫生交汇处的辩论催化剂
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2024-08-19 DOI: 10.1093/emph/eoae017
Luke D Fannin, Zaneta M Thayer, Nathaniel J Dominy
Play is an essential part of childhood, and growing attention has focused on the potential health benefits of “risky” or “thrill-seeking” play. Such play behavior is readily observed on any playground, where it can sometimes lead to injuries––most often from fall impacts––that require medical attention. Monkey bars account for ~7% of childhood arm fractures in the United States, an alarming statistic that raises difficult questions over its costs and benefits. Many authors view monkey bars as a public health hazard, but it is plausible that our childhood impulse toward thrill-seeking play is a result of selective pressures throughout our primate evolutionary history. Indeed, emerging evidence suggests that the developmental benefits of thrill-seeking play extend into adulthood, outweighing the occasional costs of injury. Disparate and consequential, these dueling perspectives have fueled debate among health professionals and policymakers, but with little attention to the work of biological anthropologists. Here we call attention to the hominin fossil record and play behaviors of non-human primates, providing a novel perspective that bolsters arguments for the adaptive significance of thrill-seeking play. The moment for such a review is timely, for it commemorates the centennial anniversaries of two playground icons: the jungle gym and monkey bars.
游戏是童年的重要组成部分,越来越多的人开始关注 "冒险 "或 "寻求刺激 "的游戏对健康的潜在益处。这种游戏行为在游乐场上随处可见,有时会导致受伤--最常见的是摔伤--需要就医。在美国,7% 的儿童手臂骨折是由单杠造成的,这一惊人的统计数字引发了有关单杠成本和效益的棘手问题。许多学者认为猴戏棒危害公共健康,但我们童年时寻求刺激的冲动是灵长类进化史中选择性压力的结果,这一点是可信的。事实上,新出现的证据表明,寻求刺激的游戏对发育的益处一直延续到成年,超过了偶尔受伤的代价。这些截然不同的观点引发了健康专家和政策制定者的争论,但却很少有人关注生物人类学家的工作。在这里,我们呼吁人们关注类人化石记录和非人灵长类的游戏行为,提供一个新的视角来支持寻求刺激的游戏的适应意义。这篇综述的发表恰逢其时,因为它纪念了两个游乐场标志性建筑的百年诞辰:丛林健身房和单杠。
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引用次数: 0
Germline mutation rate predicts cancer mortality across 37 vertebrate species. 种系突变率可预测 37 种脊椎动物的癌症死亡率。
IF 3.3 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2024-08-19 eCollection Date: 2024-01-01 DOI: 10.1093/emph/eoae016
Stefania E Kapsetaki, Zachary T Compton, Walker Mellon, Orsolya Vincze, Mathieu Giraudeau, Tara M Harrison, Lisa M Abegglen, Amy M Boddy, Carlo C Maley, Joshua D Schiffman

Background and objectives: Cancer develops across nearly every species. However, cancer occurs at unexpected and widely different rates throughout the animal kingdom. The reason for this variation in cancer susceptibility remains an area of intense investigation. Cancer evolves in part through the accumulation of mutations, and therefore, we hypothesized that germline mutation rates would be associated with cancer prevalence and mortality across species.

Methodology: We collected previously published data on germline mutation rate and cancer mortality data for 37 vertebrate species.

Results: Germline mutation rate was positively correlated with cancer mortality (P-value = 0.0008; R2 = 0.13). Controlling for species' average parental age, maximum longevity, adult body mass or domestication did not improve the model fit (the change (Δ) in Akaike Information Criterion (AIC) was less than 2). However, this model fit was better than a model controlling for species trophic level (ΔAIC > 2).

Conclusions and implications: The increased death rate from cancer in animals with increased germline mutation rates may suggest underlying hereditary cancer predisposition syndromes similar to those diagnosed in human patients. Species with higher germline mutation rates may benefit from close monitoring for tumors due to increased genetic risk for cancer development. Early diagnoses of cancer in these species may increase their chances of overall survival, especially for threatened and endangered species.

背景和目的:几乎所有物种都会患癌症。然而,在整个动物王国中,癌症的发生率却出乎意料地大相径庭。这种癌症易感性差异的原因仍是一个需要深入研究的领域。癌症部分是通过突变积累演变而来的,因此,我们假设种系突变率与不同物种的癌症发病率和死亡率有关:我们收集了以前公布的 37 种脊椎动物的种系突变率数据和癌症死亡率数据:结果:种系突变率与癌症死亡率呈正相关(P值=0.0008;R2=0.13)。控制物种的平均亲代年龄、最长寿命、成年体重或驯化程度并不能提高模型的拟合度(阿凯克信息准则(AIC)的变化(Δ)小于 2)。然而,该模型的拟合优于控制物种营养级的模型(ΔAIC > 2):种系突变率越高的动物癌症死亡率越高,这可能表明其潜在的遗传性癌症易感综合征与人类患者诊断出的癌症易感综合征类似。由于癌症发生的遗传风险增加,种系突变率较高的物种可能受益于对肿瘤的密切监测。对这些物种进行癌症早期诊断可能会增加它们的总体存活机会,尤其是对受威胁和濒危物种而言。
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引用次数: 0
Integrating the Thrifty Genotype and Evolutionary Mismatch Hypotheses to understand variation in cardiometabolic disease risk 整合 "易变基因型 "和 "进化错配假说",了解心脏代谢疾病风险的变异
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2024-07-29 DOI: 10.1093/emph/eoae014
Layla Brassington, Audrey M Arner, Marina M Watowich, Jane Damstedt, Ng Kee Seong, Yvonne Ai Lian Lim, Vivek V Venkataraman, Ian Wallace, Thomas S Kraft, Amanda J Lea
More than 60 years ago, James Neel proposed the Thrifty Genotype Hypothesis to explain the widespread prevalence of type 2 diabetes in Western, industrial contexts. This hypothesis posits that variants linked to conservative energy usage and increased fat deposition would have been favored throughout human evolution due to the advantages they could provide during periods of resource limitation. However, in industrial environments, these variants instead produce an increased risk of obesity, metabolic syndrome, type 2 diabetes, and related health issues. This hypothesis has been popular and impactful, with thousands of citations, many ongoing debates, and several spin-off theories in biomedicine, evolutionary biology, and anthropology. However, despite great attention, the applicability and utility of the Thrifty Genotype Hypothesis (TGH) to modern human health remains, in our opinion, unresolved. To move research in this area forward, we first discuss the original formulation of the TGH and its critiques. Second, we trace the TGH to updated hypotheses that are currently at the forefront of the evolutionary medicine literature—namely, the Evolutionary Mismatch Hypothesis. Third, we lay out empirical predictions for updated hypotheses and evaluate them against the current literature. Finally, we discuss study designs that could be fruitful for filling current knowledge gaps; here, we focus on partnerships with subsistence-level groups undergoing lifestyle transitions, and we present data from an ongoing study with the Orang Asli of Malaysia to illustrate this point. Overall, we hope this synthesis will guide new empirical research aimed at understanding how the human evolutionary past interacts with our modern environments to influence cardiometabolic health
60 多年前,詹姆斯-尼尔(James Neel)提出了 "节俭基因型假说"(Thrifty Genotype Hypothesis),以解释 2 型糖尿病在西方工业环境中的广泛流行。该假说认为,在整个人类进化过程中,与保守使用能量和增加脂肪沉积有关的变异会受到青睐,因为它们在资源有限的时期能够提供优势。然而,在工业环境中,这些变种反而增加了肥胖、代谢综合征、2 型糖尿病和相关健康问题的风险。这一假说广受欢迎,影响深远,在生物医学、进化生物学和人类学领域有成千上万的引用、许多持续的争论和一些衍生理论。然而,尽管备受关注,我们认为节俭基因型假说(TGH)对现代人类健康的适用性和实用性仍未得到解决。为了推进这一领域的研究,我们首先讨论了节俭基因型假说的最初表述及其批评意见。其次,我们将 TGH 追溯到目前处于进化医学文献前沿的最新假说--即进化错配假说(Evolutionary Mismatch Hypothesis)。第三,我们列出了最新假说的经验预测,并根据当前文献对其进行评估。最后,我们讨论了可有效填补当前知识空白的研究设计;在此,我们将重点放在与正在经历生活方式转变的自给自足群体的合作上,并介绍了正在进行的一项针对马来西亚奥朗阿斯利人的研究数据,以说明这一点。总之,我们希望本综述能指导新的实证研究,以了解人类进化的过去如何与现代环境相互作用,从而影响心脏代谢健康。
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引用次数: 0
Advancing Evolutionary Medicine in Northern Germany: Collaboration between Kiel University’s Medical Faculty and the Max Planck Institute for Evolutionary Biology 在德国北部推进进化医学:基尔大学医学院与马克斯-普朗克进化生物学研究所之间的合作
IF 3.3 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2024-07-24 DOI: 10.1093/emph/eoae013
John F Baines, Claudia D. Baldus, Frederic Bertels, Monika Brüggemann, Christoph Kaleta, Matthias Laudes, Franz-Josef Mueller, Linda Odenthal-Hesse, M. Poyet, Paul B Rainey, Philip Rosenstiel, Alexander Scheffold, Susanne Sebens, Joachim Thiery, Arne Traulsen
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引用次数: 0
Re-examining the adaptive function of nausea and vomiting in pregnancy 重新审视孕期恶心和呕吐的适应功能
IF 3.7 3区 医学 Q2 EVOLUTIONARY BIOLOGY Pub Date : 2024-07-01 DOI: 10.1093/emph/eoae012
Emily H Emmott
Nausea and vomiting in pregnancy (NVP) has been proposed to have a prophylactic function. In this commentary, I re-examine NVP from an evolutionary perspective in light of new research on NVP. First, current evidence suggests that the observed characteristics of NVP does not align well with a prophylactic function. Further, NVP is typically associated with high costs for pregnant women, while moderate-to-severe NVP is associated with increased risks of poorer foetal/birth outcomes. In contrast, mild NVP limited to early pregnancy may associate with improved foetal outcomes – indicating a potential evolutionary benefit. Second, researchers have recently identified growth differentiation factor 15 (GDF15) to cause NVP, with implications that low-levels of pre-conception GDF15 (associated with lower cellular stress/inflammation) may increase risks/symptoms of NVP. If so, NVP in contemporary post-industrialised populations may be more severe due to environmental mismatch, and the current symptomology of NVP in such populations should not be viewed as a typical experience of pregnancy.
妊娠恶心和呕吐(NVP)被认为具有预防功能。在这篇评论中,我将根据有关 NVP 的新研究,从进化的角度重新审视 NVP。首先,目前的证据表明,观察到的 NVP 特征与预防功能并不相符。此外,NVP 通常会给孕妇带来高昂的费用,而中度至重度 NVP 则会增加胎儿/分娩结局较差的风险。与此相反,仅限于孕早期的轻度 NVP 可能会改善胎儿的预后--这表明它具有潜在的进化益处。其次,研究人员最近发现,生长分化因子 15(GDF15)可导致 NVP,这意味着孕前低水平的 GDF15(与较低的细胞压力/炎症有关)可能会增加 NVP 的风险/症状。如果是这样的话,由于环境不匹配,当代后工业化人口的 NVP 可能会更加严重,而这些人口目前的 NVP 症状不应被视为典型的妊娠经历。
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引用次数: 0
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Evolution, Medicine, and Public Health
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