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Prenatal exposure to greenness and early childhood pneumonia: A nationwide study in Japan.
IF 16.6 1区 医学 Q1 RESPIRATORY SYSTEM Pub Date : 2025-02-20 DOI: 10.1183/13993003.02181-2024
Akihiro Shiroshita, Yuki Kataoka, Qianzhi Wang, Naoki Kajita, Keisuke Anan, Yusaku Shibata, Nobuyuki Yajima
{"title":"Prenatal exposure to greenness and early childhood pneumonia: A nationwide study in Japan.","authors":"Akihiro Shiroshita, Yuki Kataoka, Qianzhi Wang, Naoki Kajita, Keisuke Anan, Yusaku Shibata, Nobuyuki Yajima","doi":"10.1183/13993003.02181-2024","DOIUrl":"10.1183/13993003.02181-2024","url":null,"abstract":"","PeriodicalId":12265,"journal":{"name":"European Respiratory Journal","volume":" ","pages":""},"PeriodicalIF":16.6,"publicationDate":"2025-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143364098","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Transcriptomic profiling of the airway epithelium in COPD links airway eosinophilia to type 2 inflammation and corticosteroid response.
IF 16.6 1区 医学 Q1 RESPIRATORY SYSTEM Pub Date : 2025-02-20 DOI: 10.1183/13993003.01875-2024
Clarus Leung, Hye Yun Park, Xuan Li, Graeme J Koelwyn, Josie Tuong, Seyed Milad Vahedi, Fernando Sergio Leitao Filho, Julia S Yang, Rachel L Eddy, Stephen Milne, Min Hyung Ryu, Hiroto Takiguchi, Kentaro Akata, Seung Won Ra, Ji-Yong Moon, Hyun Kuk Kim, Yuji Cho, Kei Yamasaki, Stephan F van Eeden, Tawimas Shaipanich, Stephen Lam, Janice M Leung, Don D Sin

Background: A subset of COPD patients have high levels of eosinophils in the distal airways ("airway eosinophilia").

Objectives: To compare the gene expression of type 2 inflammation in airway epithelial brushings of COPD patients with and without airway eosinophilia and to investigate the changes after inhaled corticosteroids (ICS).

Methods: Post-hoc analyses of the DISARM randomised controlled trial investigated the expression of airway inflammation (type 1, 2, and 17), IL-13, and mast cell gene signatures at baseline and after 12-week ICS treatment. Gene signatures were generated from RNA sequencing of airway epithelial brushings. Airway eosinophilia was defined as eosinophils>1% of the total leukocyte count in bronchoalveolar lavage. Gene set enrichment analyses identified upregulated canonical pathways in airway eosinophilia.

Results: Among 58 COPD patients, 38% had airway eosinophilia at baseline. Patients with airway eosinophilia had more severe airflow obstruction and more radiographic emphysema than the non-eosinophilia group. Patients with airway eosinophilia showed a higher epithelial expression of type 2 airway inflammation and IL-13 and mast cell activation at baseline, but the expression of type 1 and type 17 airway inflammation was similar to patients without airway eosinophilia. The airway eosinophilia group showed an upregulation of canonical pathways related to type 2 immune response and asthma. Treatment with ICS for 12 weeks reduced the epithelial expression of type 2 inflammation and mast cell gene signatures in patients with airway eosinophilia, while this change was not significant in patients without airway eosinophilia.

Conclusions: Airway eosinophilia marks a subset of COPD patients with increased airway epithelial expression of type 2 inflammation and a response to ICS treatment.

{"title":"Transcriptomic profiling of the airway epithelium in COPD links airway eosinophilia to type 2 inflammation and corticosteroid response.","authors":"Clarus Leung, Hye Yun Park, Xuan Li, Graeme J Koelwyn, Josie Tuong, Seyed Milad Vahedi, Fernando Sergio Leitao Filho, Julia S Yang, Rachel L Eddy, Stephen Milne, Min Hyung Ryu, Hiroto Takiguchi, Kentaro Akata, Seung Won Ra, Ji-Yong Moon, Hyun Kuk Kim, Yuji Cho, Kei Yamasaki, Stephan F van Eeden, Tawimas Shaipanich, Stephen Lam, Janice M Leung, Don D Sin","doi":"10.1183/13993003.01875-2024","DOIUrl":"https://doi.org/10.1183/13993003.01875-2024","url":null,"abstract":"<p><strong>Background: </strong>A subset of COPD patients have high levels of eosinophils in the distal airways (\"airway eosinophilia\").</p><p><strong>Objectives: </strong>To compare the gene expression of type 2 inflammation in airway epithelial brushings of COPD patients with and without airway eosinophilia and to investigate the changes after inhaled corticosteroids (ICS).</p><p><strong>Methods: </strong>Post-hoc analyses of the DISARM randomised controlled trial investigated the expression of airway inflammation (type 1, 2, and 17), IL-13, and mast cell gene signatures at baseline and after 12-week ICS treatment. Gene signatures were generated from RNA sequencing of airway epithelial brushings. Airway eosinophilia was defined as eosinophils>1% of the total leukocyte count in bronchoalveolar lavage. Gene set enrichment analyses identified upregulated canonical pathways in airway eosinophilia.</p><p><strong>Results: </strong>Among 58 COPD patients, 38% had airway eosinophilia at baseline. Patients with airway eosinophilia had more severe airflow obstruction and more radiographic emphysema than the non-eosinophilia group. Patients with airway eosinophilia showed a higher epithelial expression of type 2 airway inflammation and IL-13 and mast cell activation at baseline, but the expression of type 1 and type 17 airway inflammation was similar to patients without airway eosinophilia. The airway eosinophilia group showed an upregulation of canonical pathways related to type 2 immune response and asthma. Treatment with ICS for 12 weeks reduced the epithelial expression of type 2 inflammation and mast cell gene signatures in patients with airway eosinophilia, while this change was not significant in patients without airway eosinophilia.</p><p><strong>Conclusions: </strong>Airway eosinophilia marks a subset of COPD patients with increased airway epithelial expression of type 2 inflammation and a response to ICS treatment.</p>","PeriodicalId":12265,"journal":{"name":"European Respiratory Journal","volume":" ","pages":""},"PeriodicalIF":16.6,"publicationDate":"2025-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143467149","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Incident tuberculosis in people with HIV across Europe from 2012-2022: incidence rates, risk factors, and regional differences in a multicentre cohort study.
IF 16.6 1区 医学 Q1 RESPIRATORY SYSTEM Pub Date : 2025-02-20 DOI: 10.1183/13993003.01904-2024
Christian Kraef, Ashley Roen, Daria Podlekareva, Elzbieta Bakowska, Johannes Nemeth, Michael Knappik, Marie-Christine Payen, Ferdinand Wit, Christina Mussini, Antonella d'Arminio Monforte, Antonella Castagna, Nikoloz Chkhartishvili, Bastian Neesgaard, Nadine Jaschinski, Alain Volny Anne, Elena Borodulina, Marie Ballief, Elmar Wallner, Dennis Israelski, Harmony Garges, Amanda Mocroft, Ole Kirk

Background: Tuberculosis remains the leading cause of death among people with HIV. The aim of this study was to describe the incidence of tuberculosis (TB), explore risk factors and to calculate their population attributable fractions (PAF) in people with HIV across Europe, stratified by region.

Method: Longitudinal study of people with HIV aged>18 years with follow-up from either 1/1/2012, or cohort enrolment, until date of TB diagnosis, last visit, death, or 31/12/2022. Factors associated with TB, in particular antiretroviral therapy status and smoking, were analysed using multivariable Poisson regression.

Results: A total of 38 837 participants with HIV with a median follow-up of 7.7 (4.3-10.4) years. Overall, 306 TB cases were diagnosed during 275 811 person-years of follow-up (PYFU; incidence rate (IR) 1.03/1000 PYFU, 95% CI 0.91-1.11). 3.3% (n=81/2428) participants had incident TB in Eastern Europe (IR 6.13, 4.93-7.62). Overall, the IR decreased from 2.03 (1.53-2.68) in 2012 to 0.44 (0.20-0.97) in 2022. Modifiable risk factors were smoking (adjusted incidence rate ratio 2.94; 95%CI1.62-5.34) and not receiving antiretroviral therapy (versus on; 3.29; 2.36-4.58). A history of TB pre-baseline increased the risk of recurrence (aIRR 7.77; 95%CI 4.09-14.74). The PAF for not receiving antiretroviral therapy was 34.6% in Non-Eastern Europe and 31.2% in Eastern Europe.

Conclusions: TB incidence has been decreasing among people with HIV, but remains more frequent in Eastern Europe. Improvement of antiretroviral therapy-coverage and adherence and a focus on non-communicable disease risk factors such as smoking could reduce the incidence of TB.

{"title":"Incident tuberculosis in people with HIV across Europe from 2012-2022: incidence rates, risk factors, and regional differences in a multicentre cohort study.","authors":"Christian Kraef, Ashley Roen, Daria Podlekareva, Elzbieta Bakowska, Johannes Nemeth, Michael Knappik, Marie-Christine Payen, Ferdinand Wit, Christina Mussini, Antonella d'Arminio Monforte, Antonella Castagna, Nikoloz Chkhartishvili, Bastian Neesgaard, Nadine Jaschinski, Alain Volny Anne, Elena Borodulina, Marie Ballief, Elmar Wallner, Dennis Israelski, Harmony Garges, Amanda Mocroft, Ole Kirk","doi":"10.1183/13993003.01904-2024","DOIUrl":"https://doi.org/10.1183/13993003.01904-2024","url":null,"abstract":"<p><strong>Background: </strong>Tuberculosis remains the leading cause of death among people with HIV. The aim of this study was to describe the incidence of tuberculosis (TB), explore risk factors and to calculate their population attributable fractions (PAF) in people with HIV across Europe, stratified by region.</p><p><strong>Method: </strong>Longitudinal study of people with HIV aged>18 years with follow-up from either 1/1/2012, or cohort enrolment, until date of TB diagnosis, last visit, death, or 31/12/2022. Factors associated with TB, in particular antiretroviral therapy status and smoking, were analysed using multivariable Poisson regression.</p><p><strong>Results: </strong>A total of 38 837 participants with HIV with a median follow-up of 7.7 (4.3-10.4) years. Overall, 306 TB cases were diagnosed during 275 811 person-years of follow-up (PYFU; incidence rate (IR) 1.03/1000 PYFU, 95% CI 0.91-1.11). 3.3% (<i>n</i>=81/2428) participants had incident TB in Eastern Europe (IR 6.13, 4.93-7.62). Overall, the IR decreased from 2.03 (1.53-2.68) in 2012 to 0.44 (0.20-0.97) in 2022. Modifiable risk factors were smoking (adjusted incidence rate ratio 2.94; 95%CI1.62-5.34) and not receiving antiretroviral therapy (<i>versus</i> on; 3.29; 2.36-4.58). A history of TB pre-baseline increased the risk of recurrence (aIRR 7.77; 95%CI 4.09-14.74). The PAF for not receiving antiretroviral therapy was 34.6% in Non-Eastern Europe and 31.2% in Eastern Europe.</p><p><strong>Conclusions: </strong>TB incidence has been decreasing among people with HIV, but remains more frequent in Eastern Europe. Improvement of antiretroviral therapy-coverage and adherence and a focus on non-communicable disease risk factors such as smoking could reduce the incidence of TB.</p>","PeriodicalId":12265,"journal":{"name":"European Respiratory Journal","volume":" ","pages":""},"PeriodicalIF":16.6,"publicationDate":"2025-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143467554","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Distinct mural cells and fibroblasts promote pathogenic plasma cell accumulation in idiopathic pulmonary fibrosis.
IF 16.6 1区 医学 Q1 RESPIRATORY SYSTEM Pub Date : 2025-02-20 DOI: 10.1183/13993003.01114-2024
Zhi Yang, Gaoyuan Cao, Xiaosheng Tan, Sarah Orfanos, Joseph Jude, Gaetan Barbet, Steven S An, Dianhua Jiang, Reynold A Panettieri, Qi Yang

Background: Idiopathic pulmonary fibrosis (IPF) is characterized by significant, but poorly understood immune and antibody responses. This study examines the spatial transcriptomes and microenvironmental niches of antibody-producing plasma cells and tertiary lymphoid structures (TLS) in IPF lungs, and the molecular pathways influencing antibody accumulation and pulmonary fibrosis.

Methods: Explant lung tissues from IPF patients and control normal lungs were used for spatial transcriptome assays and validating RNA-scope and immunofluorescence assays. Fibroblasts derived from IPF and control lungs were examined for their capability to attract plasma cells. Neutralizing antibodies were administered to investigate molecules affecting pulmonary plasma cell accumulation and fibrosis in bleomycin-treated mice.

Results: Human IPF lungs exhibited a remarkably widespread distribution of plasma cells and local antibodies in the fibrotic regions, disseminating from plasma cell-generating TLS. Novel mural cells wrapped the vessels in TLS regions, expressing CCR7 ligands that attracted T cells into TLS to promote plasma cell generation. Distinct IPF-associated fibroblasts further secreted CXCL12, providing an extramedullary niche to foster the dissemination and accumulation of plasma cells in the fibrotic regions. Neutralization of CCR7 ligands or CXCL12 reduced plasma cell and local antibody accumulation in the lungs of bleomycin-treated mice, leading to reduced TGFβ concentrations and alleviated pulmonary fibrosis.

Conclusions: Plasma cells and local antibodies are widely distributed in the fibrotic regions of IPF lungs. Distinct subsets of IPF-associated mural cells and fibroblasts promote pathological plasma cell and antibody accumulation. These findings have potential implications for strategies aimed at targeting immune and antibody responses to combat IPF.

{"title":"Distinct mural cells and fibroblasts promote pathogenic plasma cell accumulation in idiopathic pulmonary fibrosis.","authors":"Zhi Yang, Gaoyuan Cao, Xiaosheng Tan, Sarah Orfanos, Joseph Jude, Gaetan Barbet, Steven S An, Dianhua Jiang, Reynold A Panettieri, Qi Yang","doi":"10.1183/13993003.01114-2024","DOIUrl":"https://doi.org/10.1183/13993003.01114-2024","url":null,"abstract":"<p><strong>Background: </strong>Idiopathic pulmonary fibrosis (IPF) is characterized by significant, but poorly understood immune and antibody responses. This study examines the spatial transcriptomes and microenvironmental niches of antibody-producing plasma cells and tertiary lymphoid structures (TLS) in IPF lungs, and the molecular pathways influencing antibody accumulation and pulmonary fibrosis.</p><p><strong>Methods: </strong>Explant lung tissues from IPF patients and control normal lungs were used for spatial transcriptome assays and validating RNA-scope and immunofluorescence assays. Fibroblasts derived from IPF and control lungs were examined for their capability to attract plasma cells. Neutralizing antibodies were administered to investigate molecules affecting pulmonary plasma cell accumulation and fibrosis in bleomycin-treated mice.</p><p><strong>Results: </strong>Human IPF lungs exhibited a remarkably widespread distribution of plasma cells and local antibodies in the fibrotic regions, disseminating from plasma cell-generating TLS. Novel mural cells wrapped the vessels in TLS regions, expressing CCR7 ligands that attracted T cells into TLS to promote plasma cell generation. Distinct IPF-associated fibroblasts further secreted CXCL12, providing an extramedullary niche to foster the dissemination and accumulation of plasma cells in the fibrotic regions. Neutralization of CCR7 ligands or CXCL12 reduced plasma cell and local antibody accumulation in the lungs of bleomycin-treated mice, leading to reduced TGFβ concentrations and alleviated pulmonary fibrosis.</p><p><strong>Conclusions: </strong>Plasma cells and local antibodies are widely distributed in the fibrotic regions of IPF lungs. Distinct subsets of IPF-associated mural cells and fibroblasts promote pathological plasma cell and antibody accumulation. These findings have potential implications for strategies aimed at targeting immune and antibody responses to combat IPF.</p>","PeriodicalId":12265,"journal":{"name":"European Respiratory Journal","volume":" ","pages":""},"PeriodicalIF":16.6,"publicationDate":"2025-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143467593","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Heart Rate response and cardiovascular risk during OSA: an easy biomarker derived from pulse oximetry.
IF 16.6 1区 医学 Q1 RESPIRATORY SYSTEM Pub Date : 2025-02-20 DOI: 10.1183/13993003.01883-2024
Margaux Blanchard, Théo Imler, Wen-Hsin Hu, Adrien Waeber, Geoffroy Solelhac, José Haba-Rubio, Sandrine Kerbrat, Abdelkebir Sabil, Wojciech Trzepizur, François Goupil, Audrey Thomas, Sébastien Bailly, Ali Azarbarzin, Peter Vollenweider, Pedro Marques-Vidal, Julien Vaucher, Raphael Heinzer, Frédéric Gagnadoux

Background: Sleep apnoea specific heart rate response (ΔHR) has been identified as a promising biomarker for stratifying cardiovascular (CV) risk, and predicting positive airway pressure (PAP) benefit in obstructive sleep apnoea (OSA). However, the need for prior manual scoring of respiratory events potentially limits the accessibility and reproducibility of ΔHR. We aimed to evaluate the association of pulse rate response to oxygen desaturations automatically derived from pulse oximetry (ΔHRoxi) with CV risk in OSA.

Methods: ΔHRoxi and ΔHR were measured in OSA patients from the IRSR Pays de la Loire Sleep Cohort (PLSC; n=5,002) and the HypnoLaus cohort (n=1,307). The primary outcome was major adverse CV events (MACEs), a composite of mortality, stroke, and cardiac diseases. Cox regressions analyses were conducted to evaluate the association of ΔHRoxi and ΔHR categorized into low, midrange and high categories, with MACEs.

Results: MACEs occured in 768 patients from PLSC and 87 patients from HypnoLaus (median follow-up: 8.0 and 7.5 years respectively). Multivariable Cox models showed that subjects with high ΔHRoxi (vs midrange) had higher risk of MACEs in PLSC (hazard ratio, HR: 1.42 [95% CI:1.18-1.71]) and HypnoLaus (HR: 1.72 [1.03-2.87]). Similar findings were observed for high ΔHR. Among 2,718 patients from PLSC treated with PAP, the association of PAP adherence (PAP use ≥4 h/night, vs non adherence) with MACEs was modified by baseline ΔHR and ΔHRoxi (p for interaction<0.05).

Conclusions: ΔHRoxi could constitute a reliable and easy to measure biomarker for stratifying CV risk and predicting CV benefit of PAP in OSA.

背景:睡眠呼吸暂停特异性心率反应(ΔHR)已被确定为一种很有前景的生物标志物,可用于对阻塞性睡眠呼吸暂停(OSA)患者进行心血管(CV)风险分层并预测气道正压(PAP)的益处。然而,由于需要事先对呼吸事件进行人工评分,ΔHR 的可及性和可重复性受到了潜在的限制。我们的目的是评估脉搏血氧仪(ΔHRoxi)自动得出的氧不饱和脉率反应与 OSA 中 CV 风险的关系。方法:对 IRSR 卢瓦尔河地区睡眠队列(PLSC;n=5002)和 HypnoLaus 队列(n=1307)中的 OSA 患者进行ΔHRoxi 和 ΔHR 测量。主要研究结果是主要心血管不良事件(MACEs),即死亡率、中风和心脏病的综合指数。对ΔHRoxi和分为低、中、高三类的ΔHR与MACEs的关系进行了Cox回归分析:768名PLSC患者和87名HypnoLaus患者发生了MACE(中位随访时间分别为8.0年和7.5年)。多变量 Cox 模型显示,在 PLSC(危险比 HR:1.42 [95% CI:1.18-1.71])和 HypnoLaus(HR:1.72 [1.03-2.87])中,ΔHRoxi 较高(与中值相比)的受试者发生 MACE 的风险较高。高ΔHR也有类似结果。在接受PAP治疗的2718名PLSC患者中,PAP依从性(PAP使用时间≥4小时/晚,与非依从性相比)与MACEs的关系受基线ΔHR和ΔHRoxi的影响(p为交互作用结论:ΔHRoxi可作为一种可靠且易于测量的生物标志物,用于对OSA患者的CV风险进行分层并预测PAP对CV的益处。
{"title":"Heart Rate response and cardiovascular risk during OSA: an easy biomarker derived from pulse oximetry.","authors":"Margaux Blanchard, Théo Imler, Wen-Hsin Hu, Adrien Waeber, Geoffroy Solelhac, José Haba-Rubio, Sandrine Kerbrat, Abdelkebir Sabil, Wojciech Trzepizur, François Goupil, Audrey Thomas, Sébastien Bailly, Ali Azarbarzin, Peter Vollenweider, Pedro Marques-Vidal, Julien Vaucher, Raphael Heinzer, Frédéric Gagnadoux","doi":"10.1183/13993003.01883-2024","DOIUrl":"https://doi.org/10.1183/13993003.01883-2024","url":null,"abstract":"<p><strong>Background: </strong>Sleep apnoea specific heart rate response (ΔHR) has been identified as a promising biomarker for stratifying cardiovascular (CV) risk, and predicting positive airway pressure (PAP) benefit in obstructive sleep apnoea (OSA). However, the need for prior manual scoring of respiratory events potentially limits the accessibility and reproducibility of ΔHR. We aimed to evaluate the association of pulse rate response to oxygen desaturations automatically derived from pulse oximetry (ΔHR<sub>oxi</sub>) with CV risk in OSA.</p><p><strong>Methods: </strong>ΔHR<sub>oxi</sub> and ΔHR were measured in OSA patients from the <i>IRSR Pays de la Loire Sleep Cohort</i> (<i>PLSC;</i> n=5,002) and the <i>HypnoLaus</i> cohort (n=1,307). The primary outcome was major adverse CV events (MACEs), a composite of mortality, stroke, and cardiac diseases. Cox regressions analyses were conducted to evaluate the association of ΔHR<sub>oxi</sub> and ΔHR categorized into low, midrange and high categories, with MACEs.</p><p><strong>Results: </strong>MACEs occured in 768 patients from <i>PLSC</i> and 87 patients from <i>HypnoLaus</i> (median follow-up: 8.0 and 7.5 years respectively). Multivariable Cox models showed that subjects with high ΔHR<sub>oxi</sub> (vs midrange) had higher risk of MACEs in <i>PLSC</i> (hazard ratio, HR: 1.42 [95% CI:1.18-1.71]) and <i>HypnoLaus</i> (HR: 1.72 [1.03-2.87]). Similar findings were observed for high ΔHR. Among 2,718 patients from <i>PLSC</i> treated with PAP, the association of PAP adherence (PAP use ≥4 h/night, vs non adherence) with MACEs was modified by baseline ΔHR and ΔHR<sub>oxi</sub> (p for interaction<0.05).</p><p><strong>Conclusions: </strong>ΔHR<sub>oxi</sub> could constitute a reliable and easy to measure biomarker for stratifying CV risk and predicting CV benefit of PAP in OSA.</p>","PeriodicalId":12265,"journal":{"name":"European Respiratory Journal","volume":" ","pages":""},"PeriodicalIF":16.6,"publicationDate":"2025-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143467551","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Characterization of a COPD-Associated Nephronectin Functional Splicing Genetic Variant in Human Lung Tissue via Long-Read Sequencing.
IF 16.6 1区 医学 Q1 RESPIRATORY SYSTEM Pub Date : 2025-02-20 DOI: 10.1183/13993003.01407-2024
Aabida Saferali, Anastacia N Wienecke, Zhonghui Xu, Tao Liu, Gloria M Sheynkman, Craig P Hersh, Michael H Cho, Edwin K Silverman, Xiaobo Zhou, Carole L Wilson, Lynn M Schnapp, Scott H Randell, Silvia B V Ramos, Alain Laederach, Christopher Vollmers, Peter J Castaldi

Background: Identification of COPD disease-causing genes is an important tool for understanding why COPD develops, who is at highest COPD risk, and how new COPD treatments can be developed. Previous COPD genetic studies have identified a highly significant genetic association near nephronectin (NPNT), a gene involved in tissue repair, but the biological mechanisms underlying this association are unknown.

Methods: Splicing quantitative trait locus analysis (sQTL) was performed to identify common genetic variants that alter RNA splicing in lung tissues. These lung sQTL signals were compared to COPD genetic association results near the NPNT gene using colocalization analysis to determine whether genetic risk for COPD in this region may act through altered splicing. Long read sequencing characterized COPD-associated splicing events at isoform-level resolution, and in silico protein structural analysis identified likely functional effects of this alternative splicing.

Results: An established COPD genetic risk variant, rs34712979_A, creates a cryptic splice acceptor site that causes four separate splicing changes im NPNT. The only of these splicing changes that was associated with COPD phenotypes involved a cassette exon (exon 3). Long read RNA sequencing demonstrated that the COPD risk allele causes a shift in isoform usage away from the dominant NPNT Isoform B precursor, which excludes exon 3, to the Isoform A precursor which splices-in exon 3. Alpha-fold protein structural analysis reveals that inclusion of this exon disrupts an EGF-like functional domain in NPNT.

Conclusion: Genetic variants in the nephronectin (NPNT) gene increase COPD risk by changing RNA splicing of NPNT in the lung.

{"title":"Characterization of a COPD-Associated <i>Nephronectin</i> Functional Splicing Genetic Variant in Human Lung Tissue <i>via</i> Long-Read Sequencing.","authors":"Aabida Saferali, Anastacia N Wienecke, Zhonghui Xu, Tao Liu, Gloria M Sheynkman, Craig P Hersh, Michael H Cho, Edwin K Silverman, Xiaobo Zhou, Carole L Wilson, Lynn M Schnapp, Scott H Randell, Silvia B V Ramos, Alain Laederach, Christopher Vollmers, Peter J Castaldi","doi":"10.1183/13993003.01407-2024","DOIUrl":"10.1183/13993003.01407-2024","url":null,"abstract":"<p><strong>Background: </strong>Identification of COPD disease-causing genes is an important tool for understanding why COPD develops, who is at highest COPD risk, and how new COPD treatments can be developed. Previous COPD genetic studies have identified a highly significant genetic association near nephronectin <i>(NPNT</i>), a gene involved in tissue repair, but the biological mechanisms underlying this association are unknown.</p><p><strong>Methods: </strong>Splicing quantitative trait locus analysis (sQTL) was performed to identify common genetic variants that alter RNA splicing in lung tissues. These lung sQTL signals were compared to COPD genetic association results near the <i>NPNT</i> gene using colocalization analysis to determine whether genetic risk for COPD in this region may act through altered splicing. Long read sequencing characterized COPD-associated splicing events at isoform-level resolution, and in silico protein structural analysis identified likely functional effects of this alternative splicing.</p><p><strong>Results: </strong>An established COPD genetic risk variant, rs34712979_A, creates a cryptic splice acceptor site that causes four separate splicing changes im <i>NPNT</i>. The only of these splicing changes that was associated with COPD phenotypes involved a cassette exon (exon 3). Long read RNA sequencing demonstrated that the COPD risk allele causes a shift in isoform usage away from the dominant NPNT Isoform B precursor, which excludes exon 3, to the Isoform A precursor which splices-in exon 3. Alpha-fold protein structural analysis reveals that inclusion of this exon disrupts an EGF-like functional domain in NPNT.</p><p><strong>Conclusion: </strong>Genetic variants in the nephronectin (<i>NPNT</i>) gene increase COPD risk by changing RNA splicing of <i>NPNT</i> in the lung.</p>","PeriodicalId":12265,"journal":{"name":"European Respiratory Journal","volume":" ","pages":""},"PeriodicalIF":16.6,"publicationDate":"2025-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143467582","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Proposal for a rational and sustainable use of antimicrobial filters in pulmonary function testing.
IF 16.6 1区 医学 Q1 RESPIRATORY SYSTEM Pub Date : 2025-02-20 DOI: 10.1183/13993003.02382-2024
Santiago C Arce, Javier C Brea Folco, Roque A Baldasaria
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引用次数: 0
A Long-Term Follow-Up Study of Sotatercept for Treatment of Pulmonary Arterial Hypertension: Interim Results of SOTERIA.
IF 16.6 1区 医学 Q1 RESPIRATORY SYSTEM Pub Date : 2025-02-20 DOI: 10.1183/13993003.01435-2024
Ioana R Preston, David Badesch, Hossein-Ardeschir Ghofrani, J Simon R Gibbs, Mardi Gomberg-Maitland, Marius M Hoeper, Marc Humbert, Vallerie V McLaughlin, Aaron B Waxman, Solaiappan Manimaran, Elina Mikhailova, Madhavi Reddy, Anna Lau, Janethe de Oliveira Pena, Rogerio Souza

Background: SOTERIA (NCT04796337) is an ongoing open-label study evaluating long-term safety, tolerability, and efficacy of sotatercept in participants with pulmonary arterial hypertension (PAH).

Methods: Eligible adults with PAH on stable background therapy who completed a prior sotatercept study without early discontinuation were enrolled. Participants received subcutaneous sotatercept (≤0.7 mg·kg-1 Q3W). Safety and tolerability (primary objective) were assessed by adverse events (AEs), vital signs, and laboratory assessments. Efficacy (secondary objective) was assessed by 6-minute walk distance (6MWD), N-terminal pro-B-type natriuretic peptide (NT-proBNP) levels, WHO functional class (FC), clinical worsening events, and simplified French risk score (SFRS). The data cutoff date was 08NOV2023.

Results: Altogether, 426 participants were included in the analyses. Mean (sd) duration of exposure to sotatercept and follow-up in SOTERIA was 448.6 (172.93) days (range 21-923 days; 523 patient-years). Of 426 participants, 387 (90.8%) experienced AEs, 15 (3.5%) discontinued treatment, 129 (30.3%) had serious AEs, and 11 (2.6%) had serious AEs related to treatment. There were 12 deaths (2.8%). Among AEs of interest, epistaxis (22.1%) and telangiectasia (16.9%) were the most frequently reported individual events. Twenty-two (5.2%) participants had serious bleeding events, including 2 (0.5%) with serious bleeding leading to death (not related to treatment by investigator judgment). Improvements in 6MWD, NT-proBNP, WHO FC, and SFRS achieved from baseline of SOTERIA were largely maintained at one year, including in the placebo-crossed group.

Conclusion: Interim results of SOTERIA support the favorable benefit-risk of add-on sotatercept treatment in adults with PAH. Follow-up reports from this study will provide additional information on benefit/risk.

背景:SOTERIA(NCT04796337)是一项正在进行的开放标签研究,旨在评估索特特受用于肺动脉高压(PAH)患者的长期安全性、耐受性和疗效:入选者均为接受稳定背景治疗的 PAH 患者,且之前已完成索特受特研究,没有提前停药。参与者接受皮下注射索他特停(≤0.7 mg-kg-1 Q3W)。安全性和耐受性(首要目标)通过不良事件(AE)、生命体征和实验室评估进行评估。疗效(次要目标)通过6分钟步行距离(6MWD)、N-末端前B型钠尿肽(NT-proBNP)水平、WHO功能分级(FC)、临床恶化事件和简化法国风险评分(SFRS)进行评估。数据截止日期为 2023 年 11 月 8 日:共有 426 名参与者参与了分析。SOTERIA的索他特停平均(sd)暴露时间和随访时间为448.6(172.93)天(范围21-923天;523患者年)。在 426 名参与者中,387 人(90.8%)出现了 AE,15 人(3.5%)中断了治疗,129 人(30.3%)出现了严重 AE,11 人(2.6%)出现了与治疗相关的严重 AE。有 12 人死亡(2.8%)。在值得关注的不良反应中,鼻衄(22.1%)和毛细血管扩张(16.9%)是最常报告的个别事件。22名参与者(5.2%)发生了严重出血事件,其中2人(0.5%)因严重出血导致死亡(研究者判断与治疗无关)。SOTERIA治疗一年后,6MWD、NT-proBNP、WHO FC和SFRS从基线开始的改善基本保持不变,包括安慰剂交叉治疗组:结论:SOTERIA 的中期结果表明,在 PAH 成人患者中加用索他特罗治疗具有良好的获益-风险。这项研究的后续报告将提供有关获益/风险的更多信息。
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引用次数: 0
Post-Hospitalisation COVID-19 Rehabilitation (PHOSP-R): A randomised controlled trial of exercise-based rehabilitation.
IF 16.6 1区 医学 Q1 RESPIRATORY SYSTEM Pub Date : 2025-02-20 DOI: 10.1183/13993003.02152-2024
Enya Daynes, Rachael A Evans, Neil J Greening, Nicolette C Bishop, Thomas Yates, Daniel Lozano-Rojas, Kimon Ntotsis, Matthew Richardson, Molly M Baldwin, Malik Hamrouni, Emily Hume, Hamish McAuley, George Mills, Dimitrios Megaritis, Matthew Roberts, Charlotte E Bolton, James D Chalmers, Trudie Chalder, Annemarie B Docherty, Omer Elneima, Ewen M Harrison, Victoria C Harris, Ling P Ho, Alex Horsley, Linzy Houchen-Wolloff, Olivia C Leavy, Michael Marks, Krishna Poinasamy, Jennifer K Quint, Betty Raman, Ruth M Saunders, Aarti Shikotra, Amisha Singapuri, Marco Sereno, Sarah Terry, Louise V Wain, William D-C Man, Carlos Echevarria, Ioannis Vogiatzis, Christopher Brightling, Sally J Singh

Objective: Post-COVID syndrome involves prolonged symptoms with multi-system and functional impairment lasting at least 12 weeks after acute COVID-19. We aimed to determine the efficacy of exercise-based rehabilitation interventions, either face-to-face or remote, compared to usual care in individuals experiencing Post-COVID syndrome following a hospitalisation of acute COVID-19.

Design: This single-blind randomised controlled trial compared two COVID exercise-based rehabilitation interventions (face-to-face or remote) to usual care in participants with Post-COVID syndrome following a hospitalisation. The interventions were either a face-to-face or remote eight-week program of individually prescribed exercise and education. The primary outcome was the change in Incremental Shuttle Walking Test (ISWT) following eight weeks of intervention (either face-to-face or remote) compared to usual care. Other secondary outcomes were measured including health related quality of life (HRQoL), and exploratory outcomes included lymphocyte immunotyping.

Results: 181 participants (55% male, mean [sd] age 59 [12] years, length of hospital stay 12 [19] days) were randomised. There was an improvement in the ISWT distance following face-to-face rehabilitation (mean 52 [95% CI 19 to 85]m, p=0·002) and remote rehabilitation (mean 34 [95% CI 1 to 66]m, p=0·047) compared to usual care alone. There were no differences between groups for HRQoL of self-reported symptoms. Analysis of immune markers revealed significant increases in naïve and memory CD8+ T cells following face-to-face rehabilitation versus usual care alone (p<0·001, n=31).

Conclusion: Exercise-based rehabilitation improved short-term exercise capacity in Post-COVID syndrome following an acute hospitalisation and showed potential for beneficial immunomodulatory effects.

目的:后 COVID 综合征是指急性 COVID-19 后至少持续 12 周的多系统症状和功能障碍。我们旨在确定面对面或远程运动康复干预与常规护理对急性 COVID-19 住院后 COVID 后综合征患者的疗效:这项单盲随机对照试验比较了两种基于 COVID 运动的康复干预措施(面对面或远程)与常规护理,适用于住院后患有后 COVID 综合征的参与者。干预措施包括面对面或远程的为期八周的个人处方运动和教育计划。主要结果是与常规护理相比,八周干预(面对面或远程)后增量穿梭步行测试(ISWT)的变化。其他次要结果包括与健康相关的生活质量(HRQoL),探索性结果包括淋巴细胞免疫分型:181名参与者(55%为男性,平均[sd]年龄59[12]岁,住院时间12[19]天)接受了随机治疗。与单纯常规护理相比,面对面康复(平均 52 [95% CI 19 至 85]米,p=0-002)和远程康复(平均 34 [95% CI 1 至 66]米,p=0-047)后的 ISWT 距离有所改善。在自我报告症状的 HRQoL 方面,组间没有差异。对免疫标记物的分析表明,面对面康复治疗与单纯常规治疗相比,天真和记忆 CD8+ T 细胞显著增加(p 结论:基于运动的康复治疗改善了患者的短期健康状况:以运动为基础的康复治疗提高了急性住院后COVID综合征患者的短期运动能力,并显示出有益的免疫调节效应潜力。
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引用次数: 0
Eosinophils in COPD Type 2 Inflammation: Hope or Hype?
IF 16.6 1区 医学 Q1 RESPIRATORY SYSTEM Pub Date : 2025-02-20 DOI: 10.1183/13993003.00194-2025
Francesca Polverino, MeiLan K Han
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引用次数: 0
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European Respiratory Journal
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