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Microbiome alterations in healthy pregnancy and pregnancy disorders in association with autoimmune diseases. 与自身免疫性疾病相关的健康妊娠和妊娠障碍中的微生物组改变
IF 3.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-11-03 DOI: 10.1007/s12223-025-01369-y
Fatma El-Saeed El-Demerdash, Osama A Mohammed, Hend H Mohamed, Ahmed S Doghish

Pregnancy induces significant alterations in the maternal microbiome, which are critical for fetal development and maternal health. Gynecological diseases, along with infertility, have increased due to excessive personal care product usage, which contains endocrine-disrupting chemicals (EDCs). Mammalian immune systems develop during pregnancy and after birth owing to crucial inputs from the environment. The growing incidence of autoimmune diseases (AIMDs) emphasizes the need to understand the environmental elements that play a role in their development, with the microbiome emerging as a key player. Exposure to EDCs with oxidative stress (OS) induces microbiome disruptions to promote AIMDs and negatively impacts female reproductive health and fetuses. Because the body changes in a number of ways to provide ideal conditions for fetal growth, pregnancy is a special moment in a woman's life. All microorganisms undergo changes, and their quantity and composition vary over the three trimesters of pregnancy. Recent research suggests a connection between pregnancy issues and the microorganisms present during pregnancy. This review explores the pivotal role of the human microbiome in pregnancy health, emphasizing how microbiome dynamics influence immune development and long-term immunity in offspring. It examines the impact of environmental factors, particularly EDCs, on maternal microbiota and their association with pregnancy complications such as hypertensive disorders and autoimmune diseases. The manuscript highlights current research findings and discusses potential microbiome-targeted interventions to promote maternal and fetal well-being.

妊娠引起母体微生物组的显著改变,这对胎儿发育和孕产妇健康至关重要。由于过度使用含有干扰内分泌的化学物质(EDCs)的个人护理产品,妇科疾病和不孕症有所增加。哺乳动物的免疫系统在怀孕期间和出生后由于环境的重要输入而发育。自身免疫性疾病(aimd)的发病率不断上升,强调需要了解在其发展中发挥作用的环境因素,微生物组成为关键角色。暴露于具有氧化应激(OS)的EDCs会诱导微生物组破坏,从而促进aimd,并对女性生殖健康和胎儿产生负面影响。因为身体会以多种方式发生变化,为胎儿的生长提供理想的条件,所以怀孕是女性生命中一个特殊的时刻。所有的微生物都会发生变化,它们的数量和组成在怀孕的三个月里会发生变化。最近的研究表明,怀孕问题与怀孕期间存在的微生物之间存在联系。本文探讨了人类微生物组在妊娠健康中的关键作用,强调了微生物组动态如何影响后代的免疫发育和长期免疫。它研究了环境因素,特别是EDCs,对母体微生物群的影响及其与妊娠并发症(如高血压疾病和自身免疫性疾病)的关联。该手稿强调了当前的研究成果,并讨论了潜在的微生物组靶向干预措施,以促进孕产妇和胎儿的健康。
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引用次数: 0
Microbe-based fluorescent sensor composite for drug delivery and hepatocellular carcinoma suppression. 用于药物传递和肝癌抑制的微生物荧光传感器复合材料。
IF 3.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-11-01 DOI: 10.1007/s12223-025-01377-y
Li Li, Xianzhe Lu, Liudan Liang, Fengfei Qin, Fenglian Deng, Jize Huang, Chunyi Long, Xiaoan Ma, Qian Li, Meijin Huang, Jiannan Lv

Hepatocellular carcinoma (HCC) remains a major clinical challenge due to its late diagnosis and poor prognosis. To address these limitations, we developed a novel gefitinib derivative (DCQ-Me) and integrated it into a multifunctional fluorescent nanosystem, AL-STEROID-CHO@DCQ-ME, designed for both targeted drug delivery and real-time tumor detection. The system exhibits ratiometric fluorescence behavior, enabling sensitive detection of the HCC biomarker GP73 through a new emission signal at 500 nm and a quantifiable intensity ratio (F500/F410), with a detection limit of 0.189 mmol L⁻¹. In vitro assays further demonstrated that AL-STEROID-CHO@DCQ-ME significantly inhibits proliferation and induces apoptosis in HCC cells. These results underline the dual functionality of the platform, offering precise diagnostic readouts alongside therapeutic efficacy. Overall, this study introduces an innovative theranostic strategy with potential to improve early detection and personalized treatment of liver cancer.

肝细胞癌(HCC)由于其诊断较晚和预后差,仍然是一个主要的临床挑战。为了解决这些限制,我们开发了一种新的吉非替尼衍生物(DCQ-Me),并将其整合到多功能荧光纳米系统AL-STEROID-CHO@DCQ-ME中,该系统既可以靶向给药,也可以实时检测肿瘤。该系统具有比率荧光特性,通过500 nm的新发射信号和可量化的强度比(F500/F410),可以对HCC生物标志物GP73进行灵敏的检测,检测限为0.189 mmol L⁻¹。体外实验进一步证实AL-STEROID-CHO@DCQ-ME能显著抑制肝癌细胞增殖,诱导细胞凋亡。这些结果强调了该平台的双重功能,提供精确的诊断读数和治疗效果。总的来说,这项研究提出了一种创新的治疗策略,有可能提高肝癌的早期发现和个性化治疗。
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引用次数: 0
Enhancing okra tolerance to salinity stress: role of PGPR and antioxidant enzymes. 提高秋葵对盐胁迫的耐受性:PGPR和抗氧化酶的作用。
IF 3.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-10-31 DOI: 10.1007/s12223-025-01375-0
Catherine Jose, Subramaniyan S, Sandhia G S

Salinity stress is a major constraint on global crop productivity, necessitating sustainable strategies to enhance plant resilience. Plant growth-promoting rhizobacteria (PGPR) with 1-aminocyclopropane-1-carboxylate (ACC) deaminase activity have emerged as promising candidates for mitigating salt stress in crops. The present study evaluated the potential of PGPR isolates in improving salinity tolerance of okra (Abelmoschus esculentus L.). Growth performance, chlorophyll content, and antioxidant enzyme activities-superoxide dismutase (SOD), ascorbate peroxidase (APX), and catalase (CAT)-were assessed under salinity stress conditions. PGPR inoculation significantly enhanced growth attributes, increased chlorophyll content, and improved antioxidant enzyme activity in stressed okra plants compared to uninoculated controls. Among the tested isolates, Caballeronia sp. AS11 showed the most pronounced improvement in plant growth and oxidative stress mitigation. These findings highlight the potential of ACC deaminase-producing PGPR, particularly Caballeronia sp. AS11, as bioinoculants for enhancing salinity tolerance in okra. The application of such beneficial microbes offers a sustainable approach to improve crop productivity in saline-prone environments.

盐度胁迫是全球作物生产力的主要制约因素,因此需要采取可持续战略来增强植物的抵御能力。具有1-氨基环丙烷-1-羧酸酯(ACC)脱氨酶活性的植物促生根细菌(PGPR)已成为缓解作物盐胁迫的有希望的候选菌。本研究评估了PGPR分离株在提高秋葵耐盐性方面的潜力。研究人员评估了盐胁迫条件下的生长性能、叶绿素含量和抗氧化酶活性——超氧化物歧化酶(SOD)、抗坏血酸过氧化物酶(APX)和过氧化氢酶(CAT)。与未接种的对照相比,接种PGPR显著提高了胁迫秋葵植株的生长特性、叶绿素含量和抗氧化酶活性。在被试菌株中,Caballeronia sp. AS11对植物生长和氧化胁迫的改善效果最为显著。这些发现突出了ACC脱氨酶产生的PGPR,特别是Caballeronia sp. AS11,作为提高秋葵耐盐性的生物孕育剂的潜力。这种有益微生物的应用为提高盐碱化环境中的作物生产力提供了一种可持续的方法。
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引用次数: 0
Antimicrobial activity of gentamicin-conjugated monometallic and bimetallic nanoparticles against multidrug-resistant Klebsiella pneumoniae strains. 庆大霉素偶联单金属和双金属纳米颗粒对多重耐药肺炎克雷伯菌的抑菌活性。
IF 3.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-10-31 DOI: 10.1007/s12223-025-01331-y
Samira Zakeer, Mariam E Amin, Gharieb S El-Sayyad, Rasha Mohammad Fathy, Ahmed I El-Batal, Shymaa Enany

Multidrug-resistant Klebsiella pneumoniae (MDR-KP) poses a significant clinical challenge due to limited therapeutic options and high mortality. This study investigated the antimicrobial efficacy of gamma-irradiation-synthesized gentamicin-conjugated silver nanoparticles (Gent-Ag NPs), copper oxide nanoparticles (CuO NPs), and bimetallic Ag-CuO NPs against three MDR-KP isolates in comparison with the gamma-irradiated gentamicin alone. Gent-Ag, Gent-CuO, and bimetallic Gent-Ag-CuO NPs were synthesized via gamma-radiation-induced reduction and characterized by different analytical methods to confirm their shape, size, surface morphology, particle size distribution, and crystallinity using HRTEM, SEM, DLS, and XRD, respectively. Comparative analysis demonstrated that Gent-Ag NPs exhibited superior antimicrobial activity, while Gent-CuO NPs showed diminished efficacy. SEM imaging analysis showed that Gent-Ag-CuO NPs effectively damaged and weakened the bacterial surfaces. It should be noted that the complete lys of K. pneumoniae cells is depicted by the white holes seen inside the bacteria. These findings suggest potential therapeutic applications of Ag-based NPs against MDR-KP, warranting further validation with larger sample sizes.

耐多药肺炎克雷伯菌(MDR-KP)由于治疗选择有限和死亡率高,构成了重大的临床挑战。本研究考察了γ辐照合成的庆大霉素共轭银纳米粒子(gen - ag NPs)、氧化铜纳米粒子(CuO NPs)和双金属Ag-CuO NPs对三种MDR-KP分离株的抗菌效果,并与γ辐照庆大霉素单独使用进行了比较。采用γ -辐射还原法制备了Gent-Ag、Gent-CuO和双金属Gent-Ag- cuo纳米粒子,并采用HRTEM、SEM、DLS和XRD等不同的分析方法对其形状、尺寸、表面形貌、粒径分布和结晶度进行了表征。对比分析表明,gen - ag NPs具有较好的抗菌活性,而gen - cuo NPs的抗菌活性较低。SEM成像分析表明,gen - ag - cuo NPs有效地破坏和削弱了细菌表面。应该注意的是,肺炎克雷伯菌细胞的完整酵母菌是由细菌内部的白洞所描绘的。这些发现提示了ag基NPs对耐多药kp的潜在治疗应用,需要用更大的样本量进一步验证。
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引用次数: 0
Gut allies against metabolic disorders: the therapeutic promise of probiotics. 肠道盟友对抗代谢紊乱:益生菌的治疗前景。
IF 3.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-10-27 DOI: 10.1007/s12223-025-01371-4
Tolulope Joshua Ashaolu, Thanh-Do Le
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引用次数: 0
Physalis peruviana and Lactobacillus lysates as modulators of lipid metabolism and oxidative stress: a natural alternative to statin therapy. 作为脂质代谢和氧化应激的调节剂:他汀类药物治疗的天然替代品。
IF 3.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-10-24 DOI: 10.1007/s12223-025-01346-5
Manal Mused Almatrafi, Alaa H Nada, Ahmed S Doghish, Dalia Elebeedy, Aml Ghanem, Eman Fayad, Haitham Ibrahim El-Mekkawy, Osama A Mohammed, Samy Y Elkhawaga, Dalal Sulaiman Alshaya, Fatimah Hadadi, Ahmad F Alhomodi, Muhammad Alaa Eldeen, Ahmed I Abd El Maksoud

Hyperlipidemia is a major modifiable risk factor for atherosclerosis and coronary heart disease. Although effective, current pharmacological interventions such as statins are often limited by adverse effects, including muscular pain, gastrointestinal disturbances, and increased risk of insulin resistance. Consequently, there is a growing interest in exploring safer, natural alternatives that can modulate lipid metabolism with minimal side effects. This study aimed to investigate the synergistic hypolipidemic and antioxidant effects of a combined intervention using bacterial lysates derived from Lactobacillus casei and Lactobacillus acidophilus alongside an extract of Physalis peruviana in a rat model of diet-induced hyperlipidemia. Thirty male Sprague-Dawley rats were randomly assigned to six experimental groups and treated for 7 weeks: (1) standard diet (normal control), (2) high-fat diet (HFD, hyperlipidemic control), (3) HFD + Physalis peruviana extract, (4) HFD + bacterial lysate mixture, (5) HFD + Physalis peruviana extract and bacterial lysate mixture, and (6) HFD + atorvastatin (reference drug). Lipid profiles, liver and kidney function markers, and hepatic antioxidant levels were assessed. Histopathological analyses of cardiac and hepatic tissues were also conducted. The combination of bacterial lysates and Physalis peruviana extract significantly reduced (p < 0.05) body weight, total cholesterol (TC), triglycerides (TG), low-density lipoprotein (LDL), and very low-density lipoprotein (VLDL) while significantly increasing (p < 0.05) high-density lipoprotein (HDL). This treatment also led to notable improvements in hepatic and renal function markers and enhanced hepatic antioxidant activity. Histological examination revealed reduced inflammation in cardiac and hepatic tissues of the combination-treated group, comparable to the effects observed with atorvastatin. The co-administration of Lactobacillus bacterial lysates and Physalis peruviana extract exhibited pronounced hypolipidemic and antioxidant effects, effectively mitigating diet-induced hyperlipidemia and associated organ dysfunction. These findings highlight the potential of this natural therapeutic approach as a functional alternative to conventional lipid-lowering agents in managing hyperlipidemia.

高脂血症是动脉粥样硬化和冠心病的主要可改变危险因素。虽然有效,但目前的药物干预,如他汀类药物,往往受到不良反应的限制,包括肌肉疼痛、胃肠道紊乱和胰岛素抵抗风险增加。因此,有越来越多的兴趣探索更安全,天然的替代品,可以调节脂质代谢最小的副作用。本研究旨在探讨干酪乳杆菌和嗜酸乳杆菌的细菌裂解物与紫泡Physalis peruviana提取物联合干预饮食性高脂血症大鼠模型的协同降血脂和抗氧化作用。选取30只雄性Sprague-Dawley大鼠,随机分为6个实验组,分别为:(1)标准饮食(正常对照组)、(2)高脂饮食(HFD,高脂血症对照组)、(3)HFD +青绿浆提取物、(4)HFD +细菌裂解液混合物、(5)HFD +青绿浆提取物和细菌裂解液混合物、(6)HFD +阿托伐他汀(对照药物)。评估血脂、肝肾功能指标和肝脏抗氧化水平。心脏和肝脏组织病理分析也进行了。细菌裂解物与紫泡浆提取物联合使用可显著降低(p
{"title":"Physalis peruviana and Lactobacillus lysates as modulators of lipid metabolism and oxidative stress: a natural alternative to statin therapy.","authors":"Manal Mused Almatrafi, Alaa H Nada, Ahmed S Doghish, Dalia Elebeedy, Aml Ghanem, Eman Fayad, Haitham Ibrahim El-Mekkawy, Osama A Mohammed, Samy Y Elkhawaga, Dalal Sulaiman Alshaya, Fatimah Hadadi, Ahmad F Alhomodi, Muhammad Alaa Eldeen, Ahmed I Abd El Maksoud","doi":"10.1007/s12223-025-01346-5","DOIUrl":"https://doi.org/10.1007/s12223-025-01346-5","url":null,"abstract":"<p><p>Hyperlipidemia is a major modifiable risk factor for atherosclerosis and coronary heart disease. Although effective, current pharmacological interventions such as statins are often limited by adverse effects, including muscular pain, gastrointestinal disturbances, and increased risk of insulin resistance. Consequently, there is a growing interest in exploring safer, natural alternatives that can modulate lipid metabolism with minimal side effects. This study aimed to investigate the synergistic hypolipidemic and antioxidant effects of a combined intervention using bacterial lysates derived from Lactobacillus casei and Lactobacillus acidophilus alongside an extract of Physalis peruviana in a rat model of diet-induced hyperlipidemia. Thirty male Sprague-Dawley rats were randomly assigned to six experimental groups and treated for 7 weeks: (1) standard diet (normal control), (2) high-fat diet (HFD, hyperlipidemic control), (3) HFD + Physalis peruviana extract, (4) HFD + bacterial lysate mixture, (5) HFD + Physalis peruviana extract and bacterial lysate mixture, and (6) HFD + atorvastatin (reference drug). Lipid profiles, liver and kidney function markers, and hepatic antioxidant levels were assessed. Histopathological analyses of cardiac and hepatic tissues were also conducted. The combination of bacterial lysates and Physalis peruviana extract significantly reduced (p < 0.05) body weight, total cholesterol (TC), triglycerides (TG), low-density lipoprotein (LDL), and very low-density lipoprotein (VLDL) while significantly increasing (p < 0.05) high-density lipoprotein (HDL). This treatment also led to notable improvements in hepatic and renal function markers and enhanced hepatic antioxidant activity. Histological examination revealed reduced inflammation in cardiac and hepatic tissues of the combination-treated group, comparable to the effects observed with atorvastatin. The co-administration of Lactobacillus bacterial lysates and Physalis peruviana extract exhibited pronounced hypolipidemic and antioxidant effects, effectively mitigating diet-induced hyperlipidemia and associated organ dysfunction. These findings highlight the potential of this natural therapeutic approach as a functional alternative to conventional lipid-lowering agents in managing hyperlipidemia.</p>","PeriodicalId":12346,"journal":{"name":"Folia microbiologica","volume":" ","pages":""},"PeriodicalIF":3.1,"publicationDate":"2025-10-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145353786","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Therapeutic advances in the fight against microbial resistance: innovative strategies and future challenges. 抗微生物耐药性的治疗进展:创新策略和未来挑战。
IF 3.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-10-23 DOI: 10.1007/s12223-025-01338-5
Jonathan Mandú de Araújo, Alícia Natalie Silva Dos Santos, Bruno José da Silva Bezerra, Vitória Camilo de Souza Silva, Wênio Sandoval Filho Lima da Silva, Amanda Vieira de Barros, Pablo Antonio Maia de Farias, Henrique Douglas Melo Coutinho, Maria Betânia de Melo Oliveira

Antimicrobial Resistance (AMR) is characterized by the reduced effectiveness of antibiotics due to the adaptation of microorganisms, which limits therapeutic options and increases the severity of infections. This paper aims to discuss therapeutic advances in combating AMR, highlighting innovative strategies, future challenges, and the importance of raising public awareness about the responsible use of antibiotics. This narrative review is based on studies from databases such as the National Library of Medicine, Cumulative Index to Nursing and Allied Health Literature, Web of Science, Scopus, and the Virtual Health Library, using targeted descriptors. The findings emphasize the historical shift from the pre-antibiotic era, marked by high mortality rates, to the antibiotic era, now confronted by the escalating challenge of resistance. Notable innovative strategies include the use of light-based therapies and photosensitizing agents to eradicate bacteria, the application of antimicrobial gases such as nitric oxide and ozone to reduce bacterial loads, and the development of bioactive molecules and cutting-edge technologies aimed at directly targeting resistant pathogens. Advancing these novel therapies, along with raising public awareness about the responsible use of antibiotics, is crucial to curbing the threat of AMR and safeguarding global health.

抗菌素耐药性(AMR)的特点是由于微生物的适应导致抗生素的有效性降低,这限制了治疗选择并增加了感染的严重程度。本文旨在讨论抗抗生素耐药性的治疗进展,强调创新策略、未来挑战以及提高公众对负责任地使用抗生素的认识的重要性。这篇叙述性综述是基于来自数据库的研究,如国家医学图书馆、护理和相关健康文献累积索引、科学网络、Scopus和虚拟健康图书馆,使用目标描述符。研究结果强调了从以高死亡率为标志的前抗生素时代到现在面临不断升级的耐药性挑战的抗生素时代的历史转变。值得注意的创新策略包括使用基于光的疗法和光敏剂来消灭细菌,应用抗菌气体如一氧化氮和臭氧来减少细菌负荷,以及开发生物活性分子和直接针对耐药病原体的尖端技术。推进这些新疗法,同时提高公众对负责任地使用抗生素的认识,对于遏制抗生素耐药性的威胁和保障全球健康至关重要。
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引用次数: 0
Structure-guided discovery and validation of a potent RamR inhibitor targeting efflux-mediated multidrug resistance in Salmonella typhimurium. 结构引导下发现并验证一种有效的针对鼠伤寒沙门菌外排介导的多药耐药的RamR抑制剂。
IF 3.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-10-22 DOI: 10.1007/s12223-025-01349-2
Gopal Prasad Agrawal, Md Shamsher Alam, Faisal Alotaibi, Mohammad H Alqarni, Ahmed I Foudah, Aftab Alam, Zafer Saad Al Shehri, Abdulaziz Saleh Alkhoshaiban, Faez Falah Alshehri

The emergence of multidrug-resistant (MDR) strains of Salmonella typhimurium (S. typhimurium) causes a significant global health challenge and underscores the need to develop potential antimicrobial agents. Here, we considered RamR, the major transcriptional repressor of the AcrAB-TolC efflux pump system, to identify promising inhibitors that can restore antibiotic susceptibility. We adopted an integrated computational-experimental research strategy that involved in silico screening of a structurally diverse compound database. The top four candidates (144095451, 17515455, 26648946, and 26648774) were selected for detailed analysis, which included re-docking, molecular dynamics (MD) simulations, binding free energy calculations, and free energy landscape analysis mapping. Density functional theory (DFT) was employed to explain the electronic properties and chemical reactivity of these molecules. To enhance the predictive accuracy of inhibitory potency (pIC₅₀), a machine learning (ML) regression model was developed, in which the ExtraTrees algorithm demonstrated high performance (R2 = 0.975). Among the top-ranked compounds, 144095451 emerged as the most promising RamR inhibitor, as indicated by both computational predictions and ML modelling. Experimental verification with isothermal titration calorimetry (ITC) confirmed strong binding affinity (Ka = 5.43 × 10⁶ M⁻1; ΔH = -53.18 kcal/mol; stoichiometry n = 1.74) of 144095451. Antimicrobial profiling also established its efficacy, with a minimum inhibitory concentration (MIC) of 121.65 ± 0.5 µg/mL and a zone of inhibition of 18.54 ± 0.76. These results highlight compound 144095451 as a promising RamR-targeted antimicrobial lead. This research highlights the potential of the combinatorial approach, which utilizes computational screening, structural dynamics, machine learning-based biological activity prediction, and experimental confirmation of candidate molecules against multidrug-resistant S. typhimurium.

鼠伤寒沙门菌(S. typhimurium)多药耐药菌株的出现给全球卫生带来了重大挑战,并强调了开发潜在抗菌剂的必要性。在这里,我们考虑RamR, AcrAB-TolC外排泵系统的主要转录抑制因子,以确定有希望的抑制剂,可以恢复抗生素敏感性。我们采用了一种综合的计算-实验研究策略,涉及到一个结构多样的化合物数据库的硅筛选。选取4个候选分子(144095451、17515455、26648946和26648774)进行详细分析,包括重新对接、分子动力学模拟、结合自由能计算和自由能景观分析制图。用密度泛函理论(DFT)解释了这些分子的电子性质和化学反应性。为了提高抑制效力(pIC₅0)的预测准确性,开发了机器学习(ML)回归模型,其中ExtraTrees算法表现出高性能(R2 = 0.975)。在排名靠前的化合物中,144095451是最有希望的RamR抑制剂,计算预测和ML模型都表明了这一点。等温滴定量热法(ITC)实验证实144095451具有很强的结合亲和力(Ka = 5.43 × 10⁶M⁻1;ΔH = -53.18 kcal/mol;化学计量n = 1.74)。抑菌谱也证实了其抑菌效果,最低抑菌浓度(MIC)为121.65±0.5µg/mL,抑制区为18.54±0.76。这些结果突出了化合物144095451作为一种有前景的ramr靶向抗菌铅。这项研究强调了组合方法的潜力,该方法利用计算筛选,结构动力学,基于机器学习的生物活性预测,以及针对多药鼠伤寒沙门氏菌的候选分子的实验确认。
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引用次数: 0
The role of rapid molecular diagnostics in managing bloodstream infections: a microbiological insight. 快速分子诊断在管理血液感染中的作用:微生物学的见解。
IF 3.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-10-18 DOI: 10.1007/s12223-025-01367-0
Jitendra Gupta, Ibrahim Saeed Gataa, Narinderjit Singh Sawaran Singh, G PadmaPriya, Subhashree Ray, Amrita Pal, Vimal Arora, Aseel Smerat, Akmal Abilkasimov, Mutabar Latipova

Bloodstream infections (BSIs) represent a significant clinical challenge due to their high morbidity and mortality rates, compounded by the increasing prevalence of antimicrobial resistance (AMR). Even though they are regarded as the gold standard, traditional diagnostic techniques like blood cultures frequently have low sensitivity and delayed findings. Rapid molecular diagnostics (RMDs) have completely changed how BSIs are identified and treated. By using cutting-edge methods like next-generation sequencing (NGS), loop-mediated isothermal amplification (LAMP), polymerase chain reaction (PCR), and microarray-based approaches, RMDs allow for the quick, precise, and thorough identification of pathogens and resistance markers straight from blood samples. By drastically cutting down on diagnostic delays, these technologies enable early targeted therapy start, better clinical results, and less need on broad-spectrum antibiotics, which are the primary cause of AMR. Additionally, advancements like NGS improve diagnostic accuracy by offering profound insights into pathogen genomes, virulence factors, and resistance mechanisms. Barriers including high prices, integration difficulties, and the requirement for specialized knowledge prevent them from being widely adopted, despite their transformational potential. Nevertheless, these issues are being addressed by continuous developments in automation and point-of-care (POC) systems, which should make RMDs more affordable and widely available. In order to improve therapeutic accuracy, reduce AMR, and advance infection control techniques, this research emphasizes the crucial role that RMDs play in the management of BSI. In order to improve customized medicine strategies, future initiatives include streamlining diagnostic processes and combining molecular diagnostics with clinical decision support technologies.

血液感染(bsi)由于其高发病率和死亡率,加上抗菌素耐药性(AMR)的日益流行,是一项重大的临床挑战。尽管它们被视为金标准,但传统的诊断技术,如血液培养,往往灵敏度较低,而且发现时间较晚。快速分子诊断(RMDs)彻底改变了脑损伤的识别和治疗方式。通过使用新一代测序(NGS)、环介导等温扩增(LAMP)、聚合酶链反应(PCR)和基于微阵列的方法等尖端方法,rmd可以直接从血液样本中快速、精确和彻底地鉴定病原体和耐药性标记物。通过大幅减少诊断延误,这些技术可以使靶向治疗尽早开始,获得更好的临床结果,减少对广谱抗生素的需求,而广谱抗生素是抗生素耐药性的主要原因。此外,像NGS这样的进步通过对病原体基因组、毒力因子和耐药机制提供深刻的见解,提高了诊断的准确性。价格高、整合困难和对专业知识的要求等障碍阻碍了它们被广泛采用,尽管它们具有转型潜力。尽管如此,这些问题正在通过自动化和护理点(POC)系统的持续发展得到解决,这应该使rmd更加负担得起并广泛可用。为了提高治疗的准确性,减少AMR,推进感染控制技术,本研究强调了rmd在BSI治疗中的关键作用。为了改进定制的医疗策略,未来的举措包括简化诊断过程,将分子诊断与临床决策支持技术相结合。
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引用次数: 0
Nisin: The powerhouse metabolite of lactobacillus strains to defeat prostate cancer by targeting PCA3 lncRNA, apoptosis, and cell cycle pathways. Nisin:乳酸杆菌菌株的强大代谢物,通过靶向PCA3 lncRNA,细胞凋亡和细胞周期途径来击败前列腺癌。
IF 3.1 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-10-17 DOI: 10.1007/s12223-025-01362-5
Runheng Zhao, Wenfang Liu, Ke Wang, Hongxia Li, Haiyuan Li

Prostate cancer remains a major global health challenge, driving the need for innovative therapies. Nisin, an antimicrobial peptide from Lactobacillus lactis, has shown anticancer effects in various malignancies, yet its impact on prostate cancer and the prostate cancer antigen 3 (PCA3) long non-coding RNA (lncRNA) remains unstudied. This research aimed to investigate nisin's anticancer properties in prostate cancer cells, focusing on PCA3 lncRNA, apoptosis, and cell cycle pathways. Human prostate adenocarcinoma (LNCaP) and normal human foreskin fibroblast (HFF2) cells were treated with nisin. Cell viability was measured using MTT assays, while apoptosis and cell cycle progression were assessed via flow cytometry. Quantitative PCR (qPCR) evaluated gene expression of PCA3 lncRNA, apoptosis-related genes, cell cycle regulators, and PCA3-associated microRNAs and mRNAs. In-silico analysis of TCGA-PRAD data explored PCA3's regulatory network. Nisin selectively reduced LNCaP cell viability (IC₅₀: 370.7 μM at 24 h, 177.2 μM at 48 h) compared to HFF2 cells (IC₅₀: 887.8 μM at 24 h, 406.5 μM at 48 h). It induced time-dependent apoptosis and G1 phase cell cycle arrest in LNCaP cells. Nisin downregulated PCA3 lncRNA expression, upregulated miR-132-3p and miR-1261, and altered SREBP1 and PRKD3 gene expression, modulating the PCA3 regulatory network. This study is the first to explore nisin's anticancer effects in prostate cancer, uniquely targeting PCA3 lncRNA and its downstream regulatory pathways. Nisin demonstrates potent anticancer effects in prostate cancer cells by inducing apoptosis, arresting cell cycle progression, and modulating the PCA3 lncRNA network, suggesting its potential as a novel therapeutic agent.

前列腺癌仍然是一个重大的全球健康挑战,推动了对创新疗法的需求。Nisin是乳杆菌中的一种抗菌肽,已在多种恶性肿瘤中显示出抗癌作用,但其对前列腺癌和前列腺癌抗原3 (PCA3)长链非编码RNA (lncRNA)的影响尚不清楚。本研究旨在探讨nisin在前列腺癌细胞中的抗癌特性,重点关注PCA3 lncRNA、细胞凋亡和细胞周期途径。用nisin治疗人前列腺癌(LNCaP)和正常人包皮成纤维细胞(HFF2)。用MTT法测定细胞活力,用流式细胞术测定细胞凋亡和细胞周期进展。定量PCR (qPCR)评估PCA3 lncRNA、凋亡相关基因、细胞周期调节因子以及PCA3相关microrna和mrna的基因表达。TCGA-PRAD数据的计算机分析探索了PCA3的调控网络。Nisin选择性地降低了LNCaP电池的活力(IC₅₀:370.7 μM在24小时,177.2 μM在48小时),而HFF2电池(IC₅₀:887.8 μM在24小时,406.5 μM在48小时)。诱导LNCaP细胞时间依赖性凋亡和G1期细胞周期阻滞。Nisin下调PCA3 lncRNA表达,上调miR-132-3p和miR-1261,改变SREBP1和PRKD3基因表达,调节PCA3调控网络。本研究首次探索nisin独特靶向PCA3 lncRNA及其下游调控途径在前列腺癌中的抗癌作用。Nisin通过诱导前列腺癌细胞凋亡、阻滞细胞周期进程和调节PCA3 lncRNA网络,在前列腺癌细胞中显示出强大的抗癌作用,表明其作为一种新型治疗剂的潜力。
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Folia microbiologica
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