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Discovery of protein interactors of SUGARWINs in Saccharum officinarum using cDNA library screening. 利用cDNA文库筛选发现甘蔗渣中糖类蛋白相互作用物。
IF 2.7 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-07-01 DOI: 10.1071/FP25049
Aqsa Parvaiz, Muhammad Mubashar Zafar, Faiz Ahmad Joyia, Sultana Anwar, Andrei Smertenko, Hira Kamal, Saba Zafar, Mishal Subhan, Muhammad Sarwar Khan, Mahmoud F Seleiman, Majed A Alotaibi, Sezai Ercisli, Ghulam Mustafa, Xuefei Jiang

Sugarcane holds considerable commercial significance due to its role as the primary source of sugar and its potential as a global biofuel resource. Fungal pathogens and insect pests present significant challenges to the cultivation of this crop, leading to substantial reductions in crop yield and sugar recovery. In response to pathogen infection, plants initiate their defense mechanisms, which involve the upregulation of pathogenesis-related proteins such as chitinase, glucanase, and chitosanase. SUGARWINs refer to a group of PR-4 proteins that are associated with the defense mechanisms of sugarcane against phytopathogens. Their gene expression is induced in response to wounds caused by Diatraea saccharalis larvae and diseases caused by fungal pathogens such Colletothricum falcatum and Fusarium verticillioides . We report the finding of some other proteins that interact with SUGARWINs and may also have a role in the defense against fungal diseases. The sugarcane cDNA library was screened against SUGARWIN1 and SUGARWIN2 proteins to find possible interactors. A strong interaction of both SUGARWIN1 and SUGARWIN2 was observed with oxygen evolving enhancer protein 1 and synaptotagmin 1. These interactions were further validated by BiFC (biomolecular fluorescence complementation) assay. For further molecular characterization, subcellular localization studies of SUGARWINs and interactor proteins were conducted by translational fusion with green fluorescent protein.

甘蔗作为糖的主要来源及其作为全球生物燃料资源的潜力,具有相当大的商业意义。真菌病原体和害虫对这种作物的种植提出了重大挑战,导致作物产量和糖回收率大幅下降。为应对病原菌感染,植物启动了自身的防御机制,包括几丁质酶、葡聚糖酶和壳聚糖酶等致病相关蛋白的上调。SUGARWINs是指一组与甘蔗抵抗植物病原体的防御机制有关的PR-4蛋白。它们的基因表达是对糖瘟菌幼虫造成的伤口和镰孢炭疽菌和黄萎病菌等真菌病原体引起的疾病的反应。我们报道了其他一些与SUGARWINs相互作用的蛋白质的发现,这些蛋白质也可能在抵抗真菌疾病中发挥作用。利用甘蔗cDNA文库对SUGARWIN1和SUGARWIN2蛋白进行筛选,寻找可能的相互作用物。研究发现,SUGARWIN1和SUGARWIN2与氧进化增强蛋白1和synaptotagmin 1有较强的相互作用。这些相互作用通过生物分子荧光互补实验进一步验证。为了进一步的分子表征,通过与绿色荧光蛋白的翻译融合,对SUGARWINs和相互作用蛋白进行了亚细胞定位研究。
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引用次数: 0
Genome-wide identification of bHLH gene family and screening of genes related to prickle development in Zanthoxylum armatum. 花椒bHLH基因家族的全基因组鉴定及刺发育相关基因的筛选。
IF 2.7 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-07-01 DOI: 10.1071/FP24345
Yuwei Yi, Hualin Zou, Nuo Wang, Yansheng Xue, Weiwei Zhang, Feng Xu, Jiabao Ye, Yongling Liao

Zanthoxylum armatum has edible and medicinal value but its prickles make harvesting difficult. The bHLH gene family is vital in regulating physiological and developmental processes. One hundred and ninety-five ZabHLH genes from its genome were grouped into 11 subgroups and 23 subfamilies. Members of the bHLH IIIf subfamily play an important role in trichome development, and ZabHLH22 , ZabHLH110 , ZabHLH161 , and ZabHLH194 , which belong to this subfamily, were selected as candidate genes. Chromosomal localization analysis showed that 165 of 195 ZabHLHs were unevenly distributed on 31 chromosomes, and 30 ZabHLHs were localized to unanchored scaffolds. The expansion of ZabHLHs mainly includes dispersed replication and whole-genome duplication or segmental replication. Fourty-seven cis -acting elements were predicted in the promoters of ZabHLHs , with hormone-responsive elements being the most abundant. Expression profiles of four candidate genes were analyzed in two Z. armatum cultivars. Trichome development is regulated by hormones such as methyl jasmonate, salicylic acid, and auxin. The qRT-PCR results indicate that four candidate genes respond to the stress induced by these three hormones. We predict that ZabHLH110 , ZabHLH161 , and ZabHLH194 are most likely involved in prickle development. The results are helpful to further explore the potential roles and mechanisms of ZabHLHs in the development of Z. armatum prickles.

Zanthoxylum armatum具有食用和药用价值,但其刺使收获困难。bHLH基因家族在调节生理和发育过程中至关重要。从其基因组中提取的195个ZabHLH基因被划分为11个亚群和23个亚家族。bHLH IIIf亚家族的成员在毛状体发育中起重要作用,我们选择了属于该亚家族的ZabHLH22、ZabHLH110、ZabHLH161和ZabHLH194作为候选基因。染色体定位分析显示,195个ZabHLHs中的165个不均匀分布在31条染色体上,30个定位在未锚定的支架上。ZabHLHs的扩增主要包括分散复制和全基因组复制或片段复制。在ZabHLHs的启动子中预测了47个顺式作用元件,其中激素响应元件最为丰富。分析了4个候选基因在2个柽柳品种中的表达谱。毛状体的发育受茉莉酸甲酯、水杨酸和生长素等激素的调节。qRT-PCR结果表明,4个候选基因对这3种激素诱导的应激有应答。我们预测ZabHLH110、ZabHLH161和ZabHLH194最有可能参与刺痛的发育。这一结果有助于进一步探讨ZabHLHs在番荔枝皮发育中的潜在作用及其机制。
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引用次数: 0
Trehalose application mitigates drought stress in by enhancing photosynthesis, antioxidant activity, and osmolyte production in sugar beet (Betus vulgaris). 海藻糖通过提高甜菜(Betus vulgaris)的光合作用、抗氧化活性和渗透产物产量来缓解干旱胁迫。
IF 2.6 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-07-01 DOI: 10.1071/FP24183
Yuyu Hao, Yuning Zhai, Piergiorgio Stevanato, Ruixing Li, Lihua Yu, Gui Geng, Lihua Wang, Yao Xu, Jiahui Liu, Yuguang Wang

Trehalose is a naturally occurring and non-toxic disaccharide, and has been recognised for its role in mitigating abiotic stress in various plant species. However, its potential to enhance drought resistance in sugar beet (Beta vulgaris ) remains unexplored. This study evaluated the effects of exogenous trehalose application on sugar beet seedlings subjected to drought stress. Trehalose solutions at concentrations of 5, 10, 15, 20, and 30mM were applied foliarly during the stress period. Drought stress markedly reduced key growth and physiological parameters, including dry and fresh biomass, leaf relative water content, root area, leaf area, plant height, chlorophyll content, and root activity, while increasing oxidative stress markers such as superoxide anion and malondialdehyde levels. Among the treatments, 20mM trehalose notably alleviated these adverse effects by improving physiological and biochemical traits. Specifically, it enhanced net photosynthetic rate (Pn), antioxidant enzyme activity, and regulated osmolyte accumulation. These findings suggest that trehalose application can effectively improve sugar beet resilience to drought, offering a promising approach for optimizing sugar beet cultivation in water-limited environments.

海藻糖是一种天然存在的无毒双糖,在减轻各种植物的非生物胁迫方面发挥着重要作用。然而,其增强甜菜(Beta vulgaris)抗旱性的潜力仍未被探索。本研究评价了外源海藻糖对干旱胁迫下甜菜幼苗的影响。胁迫期间叶面分别施用浓度为5、10、15、20和30mM的海藻糖溶液。干旱胁迫显著降低了干、鲜生物量、叶片相对含水量、根面积、叶面积、株高、叶绿素含量和根系活性等关键生长和生理参数,同时提高了超氧阴离子和丙二醛等氧化胁迫标志物水平。其中,20mM海藻糖通过改善生理生化性状,显著缓解了这些不良反应。具体而言,它提高了净光合速率(Pn)、抗氧化酶活性,并调节了渗透物的积累。这些结果表明,海藻糖的施用可以有效提高甜菜的抗旱能力,为优化缺水环境下的甜菜种植提供了一条有希望的途径。
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引用次数: 0
Phenotyping of industrial hemp (Cannabis sativa) genotypes with different growth habits. 不同生长习性的工业大麻基因型的表型分析。
IF 2.7 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-07-01 DOI: 10.1071/FP24266
Alison R Gill, Beth R Loveys, Christopher J Brien, Nathaniel Jewell, Bettina Berger, Timothy R Cavagnaro, Rachel A Burton

Industrial hemp (Cannabis sativa ) has gained renewed scientific and agricultural interest worldwide as a multi-use, high-value crop, with products spanning textile, clothing, medicinal, food, and construction industries. Cannabis exhibits broad genetic diversity and high phenotypic plasticity, with strong genotype × environment interactions, resulting in varied aboveground growth habits from tall and thin to short and bushy. Here, we compared the growth and response to water deficit over time in seedlings of two tall, thin French dual-purpose industrial hemp genotypes, Felina 32 and Ferimon 12, and one short, bushy Chinese dual-purpose genotype, Han NE, using state-of-the-art non-destructive phenotyping and automated gravimetric watering systems. Despite the different growth habits, growth patterns were remarkably similar. Water deficit consistently reduced shoot and root dry weight, plant height, number of leaf pairs, CO2 assimilation, and stomatal conductance in all three genotypes. Han NE showed potential for greater water use efficiency, possibly linked to the shorter bushy growth habit, but further research is needed to evaluate varying growth habits within different environments and over the entire plant lifecycle. This study provides valuable insights into diverse hemp genotypes to inform field-based agronomic decisions and targeted breeding programs.

工业大麻(大麻sativa)作为一种多用途、高价值的作物,在全球范围内获得了新的科学和农业兴趣,其产品涵盖纺织、服装、医药、食品和建筑行业。大麻具有广泛的遗传多样性和高度的表型可塑性,基因型与环境的相互作用强,导致其地上生长习性从高瘦到矮多。在这里,我们比较了两种又高又瘦的法国双重用途工业大麻基因型Felina 32和Ferimon 12,以及一种矮又浓密的中国双重用途基因型Han NE的幼苗的生长和对水分亏缺的响应,使用了最先进的无损表型分析和自动重力浇水系统。尽管生长习性不同,但生长模式却惊人地相似。在所有三种基因型中,水分亏缺均降低了茎和根的干重、株高、叶片对数、CO2同化和气孔导度。Han NE显示了更高的水利用效率的潜力,可能与较短的浓密生长习性有关,但需要进一步的研究来评估不同环境和整个植物生命周期中的不同生长习性。这项研究提供了有价值的见解,以不同的大麻基因型为基础的田间农艺决策和有针对性的育种计划。
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引用次数: 0
Corrigendum to: Enriched enzymes and crosstalking KEGG pathways in the rhizospheric soil fungiome of the wild plant Moringa oleifera. 野生植物辣木根际土壤菌群中富集酶和串扰KEGG通路的勘误。
IF 2.6 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-07-01 DOI: 10.1071/FP24297_CO
Rewaa S Jalal, Abeer S Aloufi, Abeer Al-Andal, Nahaa M Alotaibi, Haneen W Abuauf, Fatimah M Alshehrei, Mohammed Y Refai, Sahar A Alshareef, Alaa A Alnahari, Fatmah O Sefrji, Abeer M Almutrafy, Aala A Abulfaraj
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引用次数: 0
Effects of shading on physiological characteristics of Bletilla striata. 遮荫对白芨生理特性的影响。
IF 2.7 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-07-01 DOI: 10.1071/FP25085
Hanyue Xue, Xiaoxuan Zeng, Liu Yang, Miao Xiong, Xiaoyu Ming, Xiantong Wang, Xuan Yang, Xiaoyu Wang, Fuwen Luo, Chao Zhang, Xiaofang Yu

Bletilla striata is a ground cover plant that thrives in cool, humid environments. It has potential horticultural and ecological applications that can benefit from optimising outdoor cultivation techniques by understanding its light requirements and adaptive mechanisms. This study examined the impact of different shading levels on the growth and photosynthetic responses of B. striata . The results showed moderate shading improved growth, increased chlorophyll content, and reduced oxidative stress. Seasonal variation in water availability also influenced reactive oxygen species (ROS) accumulation and antioxidant enzyme activity, particularly during periods of reduced water supply. Moreover, moderate shading enhanced photosynthetic performance by increasing the electron transport rate (ETR), photochemical quenching (qP), and non-photochemical quenching (NPQ), effectively mitigating photoinhibition. In summary, moderate shading enhances the growth and stress tolerance of B. striata , establishing a scientific foundation for improving cultivation practices in horticultural and ecological contexts.

白芨是一种地被植物,在凉爽潮湿的环境中茁壮成长。它具有潜在的园艺和生态应用,可以通过了解其光需求和适应机制来优化室外栽培技术。研究了不同遮荫水平对白杨生长和光合响应的影响。结果表明,适度遮荫能促进植株生长,增加叶绿素含量,降低氧化应激。水分有效性的季节变化也影响活性氧(ROS)的积累和抗氧化酶活性,特别是在供水减少的时期。此外,适度遮荫通过增加电子传递速率(ETR)、光化学猝灭(qP)和非光化学猝灭(NPQ)提高光合性能,有效减轻光抑制。综上所述,适度遮荫提高了条纹草的生长和抗逆性,为改善条纹草在园艺和生态环境下的栽培方法奠定了科学基础。
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引用次数: 0
Identification and analysis of superoxide dismutase (SOD) family genes in oat (Avena sativa L.) and their potential role in abiotic stress responses. 燕麦超氧化物歧化酶(SOD)家族基因的鉴定与分析及其在非生物胁迫响应中的潜在作用
IF 2.7 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-06-13 DOI: 10.1071/FP25018
Mouna Ghorbel, Ikram Zribi, Ahmad Alghamidi, Khalil Mseddi, Faiçal Brini

Superoxide dismutase (SOD) enzymes form the first line of plant protection against reactive oxygen species (ROS) accumulation in cells. In this study, we recognised 14 AvSOD genes in the hexaploid oat (Avena sativa) genome, including nine AvCSDs, three AvFSDs, and two AvMSDs. Phylogenetic analysis revealed that AvSOD genes from oat and different other monocotyledonous and dicotyledonous plant species were clustered into two different groups based on the metallic binding domain. The predicted 3D protein structures revealed comparable conserved AvSOD protein configuration within groups. Interestingly, different hormonal and light-responsive cis-elements were identified in the promoters of AvSOD genes. Gene ontology annotation results validate the AvSODs role such as response to contrasting stress stimuli (ozone, light intensity, UV-B, metallic stress…), metal-ion binding activities, cellular oxidant detoxification activity, and different other cellular components. Expression profiling by real time quantitative PCR showed that 12 genes (AvCSD1, AvCSD2, AvCSD3, AvCSD4, AvCSD5, AvCSD6, AvCSD7, AvFSD1, AvFSD2, AvFSD3, AvMSD1, and AvMSD2) were strongly upregulated in response to different hormones (abscisic acid and salicylic acid) and/or abiotic stress (salinity, cold, and drought) treatments. Our data provides more knowledge of SOD genes in plants and information for advanced functional analyses of this antioxidant gene family in oat.

超氧化物歧化酶(SOD)酶是植物抵御细胞中活性氧(ROS)积累的第一道防线。本研究在燕麦六倍体基因组中鉴定了14个AvSOD基因,包括9个AvCSDs、3个avfsd和2个AvMSDs。系统发育分析表明,燕麦和其他单子叶和双子叶植物的AvSOD基因基于金属结合域聚为两个不同的类群。预测的3D蛋白结构揭示了组内相似的保守AvSOD蛋白配置。有趣的是,在AvSOD基因的启动子中发现了不同的激素和光响应顺式元件。基因本体注释结果验证了avsod的作用,如对不同应激刺激(臭氧、光强、UV-B、金属胁迫……)的反应、金属离子结合活性、细胞氧化剂解毒活性和不同的其他细胞成分。实时定量PCR分析结果显示,在不同激素(脱酸和水杨酸)和/或非生物胁迫(盐度、寒冷和干旱)处理下,AvCSD1、AvCSD2、AvCSD3、AvCSD4、AvCSD5、AvCSD6、AvCSD7、AvFSD1、AvFSD2、AvFSD3、AvMSD1和AvMSD2等12个基因的表达谱均显著上调。我们的数据为进一步了解植物中SOD基因提供了信息,也为燕麦中这一抗氧化基因家族的高级功能分析提供了信息。
{"title":"Identification and analysis of superoxide dismutase (SOD) family genes in oat (Avena sativa L.) and their potential role in abiotic stress responses.","authors":"Mouna Ghorbel, Ikram Zribi, Ahmad Alghamidi, Khalil Mseddi, Faiçal Brini","doi":"10.1071/FP25018","DOIUrl":"https://doi.org/10.1071/FP25018","url":null,"abstract":"<p><p>Superoxide dismutase (SOD) enzymes form the first line of plant protection against reactive oxygen species (ROS) accumulation in cells. In this study, we recognised 14 AvSOD genes in the hexaploid oat (Avena sativa) genome, including nine AvCSDs, three AvFSDs, and two AvMSDs. Phylogenetic analysis revealed that AvSOD genes from oat and different other monocotyledonous and dicotyledonous plant species were clustered into two different groups based on the metallic binding domain. The predicted 3D protein structures revealed comparable conserved AvSOD protein configuration within groups. Interestingly, different hormonal and light-responsive cis-elements were identified in the promoters of AvSOD genes. Gene ontology annotation results validate the AvSODs role such as response to contrasting stress stimuli (ozone, light intensity, UV-B, metallic stress…), metal-ion binding activities, cellular oxidant detoxification activity, and different other cellular components. Expression profiling by real time quantitative PCR showed that 12 genes (AvCSD1, AvCSD2, AvCSD3, AvCSD4, AvCSD5, AvCSD6, AvCSD7, AvFSD1, AvFSD2, AvFSD3, AvMSD1, and AvMSD2) were strongly upregulated in response to different hormones (abscisic acid and salicylic acid) and/or abiotic stress (salinity, cold, and drought) treatments. Our data provides more knowledge of SOD genes in plants and information for advanced functional analyses of this antioxidant gene family in oat.</p>","PeriodicalId":12483,"journal":{"name":"Functional Plant Biology","volume":"52 6","pages":""},"PeriodicalIF":2.7,"publicationDate":"2025-06-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145354344","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Spermidine synthase genes from mulberry play an important role in drought stress tolerance by altering antioxidant enzymes and osmotic regulation. 桑树亚精胺合成酶基因通过改变抗氧化酶和渗透调节在抗旱性中起重要作用。
IF 2.7 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-06-13 DOI: 10.1071/FP24226
Dan Liu, Qiang Lin, Changyu Qiu, Xiaomei Lu, Ningjia He

Our previous experiments confirmed that two mulberry spermidine synthase (SPDS) genes (MnSPDS1 and MnSPDS2) that encode functional proteins are highly expressed under drought stress. In this study, the functions of MnSPDS1/MnSPDS2 in the drought stress response were further explored by silencing and overexpressing these genes in mulberry and tobacco, respectively. Compared with the wild-type (WT) plants, the MnSPDS1/MnSPDS2-overexpression tobacco plants were more tolerant to drought stress and showed a higher spermidine content (P < 0.05). Moreover, overexpression of MnSPDS1/MnSPDS2 at the physiological level alleviated membrane damage caused by drought and improved osmotic regulation and antioxidant capacity. In addition, correlation analysis showed that the content of spermidine was positively correlated with the expression levels of MnSPDS1 and MnSPDS2, with correlation coefficients of 0.762 and 0.715, respectively. Moreover, drought injury was more serious in the MnSPDS-silenced seedlings than in the WT seedlings after drought treatment. These results suggest that MnSPDS genes play important roles in the drought stress response and are valuable for molecular breeding to enhance the drought tolerance of mulberry.

我们之前的实验证实,在干旱胁迫下,两个编码功能蛋白的桑树亚精胺合成酶(SPDS)基因MnSPDS1和MnSPDS2高表达。本研究通过在桑树和烟草中分别沉默和过表达MnSPDS1/MnSPDS2基因,进一步探讨了MnSPDS1/MnSPDS2在干旱胁迫响应中的功能。与野生型(WT)相比,MnSPDS1/ mnspds2过表达烟草植株对干旱胁迫的耐受性更强,亚精胺含量(P
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引用次数: 0
The gibberellic acid responsive GmbHLHm1 transcription factor influences nodule development, nitrogen fixation activity and shoot nitrogen content in soybean (Glycine max). 赤霉素应答因子GmbHLHm1影响大豆根瘤发育、固氮活性和地上部氮含量(Glycine max)。
IF 2.6 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-06-01 DOI: 10.1071/FP25045
Die Hu, Zhengyu Wen, Nijat Imin, Kanwarpal S Dhugga, Brent N Kaiser

GmbHLHm1 is a basic Helix-Loop-Helix membrane (bHLHm1) DNA binding transcription factor localized to the symbiosome membrane and nucleus in soybean (Glycine max ) nodules. Overexpression of GmbHLHm1 significantly increased nodule number and size, nitrogen fixation activity,and nitrogen delivery to the shoots. This contrasts with reduced nodule numbers per plant, nitrogen fixation activity and poor plant growth when silenced using RNAi. The promoter of GmbHLHm1 was found to be sensitive to exogenous GA supply, decreasing the level of GUS expression in transformed hairy roots in both nodules and roots and reducing native GmbHLHm1 expression in wild-type nodules. In summary, our study suggests that GmbHLHm1 positively regulates soybean nodulation and nitrogen fixation, and that GA can negatively regulate GmbHLHm1 expression in soybean nodules.

GmbHLHm1是一种定位于大豆(Glycine max)根瘤共生体膜和细胞核的基本的Helix-Loop-Helix membrane (bHLHm1) DNA结合转录因子。过表达GmbHLHm1显著增加了根瘤数量和大小、固氮活性以及向茎部输送氮。这与使用RNAi沉默时单株根瘤数减少、固氮活性降低和植物生长不良形成对比。GmbHLHm1的启动子对外源GA供应敏感,降低根瘤和根瘤中转化毛状根中GUS的表达水平,降低野生型根瘤中GmbHLHm1的本地表达水平。综上所述,我们的研究表明GmbHLHm1正调控大豆结瘤和固氮,而GA负调控GmbHLHm1在大豆结瘤中的表达。
{"title":"The gibberellic acid responsive GmbHLHm1 transcription factor influences nodule development, nitrogen fixation activity and shoot nitrogen content in soybean (<i>Glycine max</i>).","authors":"Die Hu, Zhengyu Wen, Nijat Imin, Kanwarpal S Dhugga, Brent N Kaiser","doi":"10.1071/FP25045","DOIUrl":"10.1071/FP25045","url":null,"abstract":"<p><p>GmbHLHm1 is a basic Helix-Loop-Helix membrane (bHLHm1) DNA binding transcription factor localized to the symbiosome membrane and nucleus in soybean (Glycine max ) nodules. Overexpression of GmbHLHm1 significantly increased nodule number and size, nitrogen fixation activity,and nitrogen delivery to the shoots. This contrasts with reduced nodule numbers per plant, nitrogen fixation activity and poor plant growth when silenced using RNAi. The promoter of GmbHLHm1 was found to be sensitive to exogenous GA supply, decreasing the level of GUS expression in transformed hairy roots in both nodules and roots and reducing native GmbHLHm1 expression in wild-type nodules. In summary, our study suggests that GmbHLHm1 positively regulates soybean nodulation and nitrogen fixation, and that GA can negatively regulate GmbHLHm1 expression in soybean nodules.</p>","PeriodicalId":12483,"journal":{"name":"Functional Plant Biology","volume":"52 ","pages":""},"PeriodicalIF":2.6,"publicationDate":"2025-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144336451","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Shaping the future of date palm (Phoenix dactylifera) through new genetic improvement strategies. 通过新的遗传改良策略塑造枣椰树(Phoenix dactylifera)的未来
IF 2.6 4区 生物学 Q2 PLANT SCIENCES Pub Date : 2025-06-01 DOI: 10.1071/FP25021
Nasser Abdullah Ghdayer Al Kaabi, Karthishwaran Kandhan, Faisal Hayat, Saif Ali Matar Al Blooshi, Mohamed S Sheteiwy, Mohammed Alyafei

Conventional breeding of date palm (Phoenix dactylifera ) is inherently challenging due to its long generation time, dioecious nature, and high genetic heterogeneity. However, current developments in genomics and molecular biology offer promising avenues for accelerating breeding programs, particularly through high-throughput technologies including functional genomics. This article reviews genomic tools such as like CRISPR-Cas9 (Clustered Regularly Interspaced Short Palindromic Repeats-CRISPR-associated protein 9) that may bring significant changes in date palm breeding. The CRISPR-Cas9 system enables scientists to accurately target genomic regions, which helps enhance breeding accuracy by adding advantageous traits and eliminating unfavorable genes through precision editing. Transcriptome and metabolome analyses have also explained the regulation of thousands of differentially expressed genes (DEGs) and metabolic pathways under environmental stress. These studies contribute to enhance the knowledge of stress tolerance mechanisms, which include the secondary metabolic process of flavonoids. Genomic studies illustrating single nucleotide polymorphism (SNP)-based diversity between cultivars from north African and the Arabian Gulf provide new genetic resources for selective breeding. The work relates genome-wide association studies (GWAS) and miRNA profiling to elucidate key regulatory networks involved in fruit development and stress resilience. The integration of such advanced technologies, especially the CRISPR-Cas9 system, is revolutionizing the landscape of date palm breeding, opening new avenues for accelerated development of superior cultivars that meet the needs of modern agriculture.

由于枣椰树世代时间长,雌雄异株性强,遗传异质性高,传统育种具有一定的挑战性。然而,目前基因组学和分子生物学的发展为加速育种计划提供了有希望的途径,特别是通过包括功能基因组学在内的高通量技术。本文综述了CRISPR-Cas9 (Clustered Regularly Interspaced Short Palindromic Repeats-CRISPR-associated protein 9)等基因组工具,这些工具可能会给枣椰树育种带来重大变化。CRISPR-Cas9系统使科学家能够准确定位基因组区域,通过精确编辑增加优势性状,消除不利基因,有助于提高育种准确性。转录组和代谢组分析也解释了环境胁迫下数千种差异表达基因(DEGs)和代谢途径的调控。这些研究有助于提高对包括黄酮类化合物次生代谢过程在内的胁迫耐受机制的认识。基因组研究表明,北非和阿拉伯海湾品种之间基于单核苷酸多态性(SNP)的多样性为选择性育种提供了新的遗传资源。这项工作涉及全基因组关联研究(GWAS)和miRNA分析,以阐明参与果实发育和逆境抗性的关键调控网络。这些先进技术的整合,特别是CRISPR-Cas9系统的整合,正在彻底改变枣椰树育种的格局,为加速培育满足现代农业需求的优质品种开辟了新的途径。
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引用次数: 0
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Functional Plant Biology
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