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Generation and Characterization of a TRIM21 Overexpressing Mouse Line TRIM21过表达小鼠品系的产生和特征描述
IF 2.4 4区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2024-11-01 DOI: 10.1002/dvg.23616
Lisa M. Mehlmann, Tracy F. Uliasz, Siu-Pok Yee, Deborah Kaback, Katie M. Lowther

Specific removal of a protein is a key to understanding its function. “Trim-Away” utilizes TRIM21, an antibody receptor and ubiquitin ligase, for acute and specific reduction of proteins. When TRIM21 is expressed in cells, introduction of a specific antibody causes rapid degradation of the targeted protein; however, TRIM21 is endogenously expressed in few cell types. We have generated a mouse line using CRISPR to insert a conditional overexpression cassette of TRIM21 into the safe harbor site, Rosa26. These conditionally-expressing mice can be bred to a wide variety of Cre mice to target cell-specific TRIM21 overexpression in different tissues. Zp3Cre mice expressed TRIM21 protein specifically in oocytes, whereas HprtCre mice expressed the protein globally. When TRIM21-overexpressing oocytes were microinjected with specific antibodies targeting either the IP3 receptor or SNAP23, these proteins were effectively degraded. In addition, cortical neural cells from globally-overexpressing TRIM21 mice showed a dramatic reduction in IP3 receptor protein within hours after electroporation of a specific antibody. These experiments confirm the effectiveness of the Trim-Away method for protein reduction. These mice should make a valuable addition to the broader research community, as a wide range of proteins and cell types can be studied using this method.

特异性去除蛋白质是了解其功能的关键。"Trim-Away "利用抗体受体和泛素连接酶 TRIM21 来快速、特异地清除蛋白质。当 TRIM21 在细胞中表达时,引入特异性抗体会导致目标蛋白质快速降解;然而,TRIM21 在少数细胞类型中内源表达。我们利用 CRISPR 技术将 TRIM21 的条件性过表达盒插入安全港位点 Rosa26,从而产生了一种小鼠品系。这些条件表达小鼠可以与多种 Cre 小鼠杂交,从而在不同组织中实现特异性细胞 TRIM21 过表达。Zp3Cre 小鼠在卵母细胞中特异性表达 TRIM21 蛋白,而 HprtCre 小鼠则全面表达该蛋白。当向TRIM21过表达的卵母细胞显微注射靶向IP3受体或SNAP23的特异性抗体时,这些蛋白会被有效降解。此外,全局表达 TRIM21 小鼠的皮层神经细胞在电穿孔特定抗体后数小时内显示出 IP3 受体蛋白的急剧减少。这些实验证实了 Trim-Away 方法在减少蛋白质方面的有效性。这些小鼠对更广泛的研究领域来说是一个宝贵的补充,因为使用这种方法可以研究多种蛋白质和细胞类型。
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引用次数: 0
Expression and Transcriptional Targets of TGFβ-RII in Paracentrotus lividus Larval Skeletogenesis TGFβ-RII 在红腹角雉幼体骨骼发生过程中的表达和转录靶标
IF 2.4 4区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2024-08-14 DOI: 10.1002/dvg.23614
Daniel Goloe, Tsvia Gildor, Smadar Ben-Tabou de-Leon

Organisms from the five kingdoms of life use minerals to harden their tissues and make teeth, shells and skeletons, in the process of biomineralization. The sea urchin larval skeleton is an excellent system to study the biological regulation of biomineralization and its evolution. The gene regulatory network (GRN) that controls sea urchin skeletogenesis is known in great details and shows similarity to the GRN that controls vertebrates' vascularization while it is quite distinct from the GRN that drives vertebrates' bone formation. Yet, transforming growth factor beta (TGF-β) signaling regulates both sea urchin and vertebrates' skeletogenesis. Here, we study the upstream regulation and identify transcriptional targets of TGF-β in the Mediterranean Sea urchin species, Paracentrotus lividus. TGF-βRII is transiently active in the skeletogenic cells downstream of vascular endothelial growth factor (VEGF) signaling, in P. lividus. Continuous perturbation of TGF-βRII activity significantly impairs skeletal elongation and the expression of key skeletogenic genes. Perturbation of TGF-βRII after skeletal initiation leads to a delay in skeletal elongation and minor changes in gene expression. TGF-β targets are distinct from its transcriptional targets during vertebrates' bone formation, suggesting that the role of TGF-β in biomineralization in these two phyla results from convergent evolution.

在生物矿化过程中,五大生物界的生物都利用矿物质来硬化组织,制造牙齿、贝壳和骨骼。海胆幼虫骨骼是研究生物矿化的生物调控及其进化的绝佳系统。控制海胆骨骼形成的基因调控网络(GRN)已被详细了解,它与控制脊椎动物血管形成的GRN相似,但与驱动脊椎动物骨骼形成的GRN截然不同。然而,转化生长因子β(TGF-β)信号调节着海胆和脊椎动物的骨骼生成。在这里,我们研究了TGF-β在地中海海胆(Paracentrotus lividus)中的上游调控并确定了其转录靶标。在地中海海胆中,TGF-βRII 在血管内皮生长因子(VEGF)信号传导下游的骨骼生成细胞中短暂活跃。对 TGF-βRII 活性的持续干扰会显著影响骨骼伸长和关键骨骼生成基因的表达。在骨骼形成后对 TGF-βRII 进行干扰会导致骨骼伸长延迟和基因表达的轻微变化。TGF-β的靶标与其在脊椎动物骨骼形成过程中的转录靶标不同,这表明TGF-β在这两个门类的生物矿化过程中的作用是趋同进化的结果。
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引用次数: 0
Generation of an Armcx1 Conditional Knockout Mouse Armcx1 条件性基因敲除小鼠的产生
IF 2.4 4区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2024-08-14 DOI: 10.1002/dvg.23615
Cora L. Bright, Howard M. Bomze, Mantu Bhaumik, Jeremy N. Kay, Romain Cartoni, Sidney M. Gospe III

Armadillo repeat-containing X-linked protein-1 (Armcx1) is a poorly characterized transmembrane protein that regulates mitochondrial transport in neurons. Its overexpression has been shown to induce neurite outgrowth in embryonic neurons and to promote retinal ganglion cell (RGC) survival and axonal regrowth in a mouse optic nerve crush model. In order to evaluate the functions of endogenous Armcx1 in vivo, we have created a conditional Armcx1 knockout mouse line in which the entire coding region of the Armcx1 gene is flanked by loxP sites. This Armcx1fl line was crossed with mouse strains in which Cre recombinase expression is driven by the promoters for β-actin and Six3, in order to achieve deletion of Armcx1 globally and in retinal neurons, respectively. Having confirmed deletion of the gene, we proceeded to characterize the abundance and morphology of RGCs in Armcx1 knockout mice aged to 15 months. Under normal physiological conditions, no evidence of aberrant retinal or optic nerve development or RGC degeneration was observed in these mice. The Armcx1fl mouse should be valuable for future studies investigating mitochondrial morphology and transport in the absence of Armcx1 and in determining the susceptibility of Armcx1-deficient neurons to degeneration in the setting of additional heritable or environmental stressors.

含犰狳重复的 X 连锁蛋白-1(Armcx1)是一种特征不明显的跨膜蛋白,可调节神经元中线粒体的转运。研究表明,过表达Armcx1可诱导胚胎神经元的神经元突起,并在小鼠视神经挤压模型中促进视网膜神经节细胞(RGC)的存活和轴突再生。为了评估内源性Armcx1在体内的功能,我们创建了一个条件性Armcx1基因敲除小鼠品系,在该品系中,Armcx1基因的整个编码区都被loxP位点包绕。将这一Armcx1fl品系与Cre重组酶的表达由β-肌动蛋白和Six3启动子驱动的小鼠品系杂交,以分别实现Armcx1基因在全球和视网膜神经元中的缺失。在确认基因缺失后,我们开始研究年龄为15个月的Armcx1基因敲除小鼠的RGC数量和形态特征。在正常生理条件下,这些小鼠没有观察到视网膜或视神经发育异常或 RGC 退化的迹象。Armcx1fl小鼠对于未来研究Armcx1缺失时线粒体形态和转运,以及确定Armcx1缺失神经元在额外遗传或环境压力下的变性易感性都很有价值。
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引用次数: 0
Sox21 homeologs autoregulate expression levels to control progression through neurogenesis Sox21同源物通过自动调节表达水平来控制神经发生的进展。
IF 2.4 4区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2024-07-26 DOI: 10.1002/dvg.23612
Dillon L. Damuth, Doreen D. Cunningham, Elena M. Silva

The SRY HMG box transcription factor Sox21 plays multiple critical roles in neurogenesis, with its function dependent on concentration and developmental stage. In the allotetraploid Xenopus laevis, there are two homeologs of sox21, namely sox21.S and sox21.L. Previous studies focused on Sox21.S, but its amino acid sequence is divergent, lacking conserved poly-A stretches and bearing more similarity with ancestral homologs. In contrast, Sox21.L shares higher sequence similarity with mouse and chick Sox21. To determine if Sox21.S and Sox21.L have distinct functions, we conducted gain and loss-of-function studies in Xenopus embryos. Our studies revealed that Sox21.S and Sox21.L are functionally redundant, but Sox21.L is more effective at driving changes than Sox21.S. These results also support our earlier findings in ectodermal explants, demonstrating that Sox21 function is dose-dependent. While Sox21 is necessary for primary neuron formation, high levels prevent their formation. Strikingly, these proteins autoregulate, with high levels of Sox21.L reducing sox21.S and sox21.L mRNA levels, and decreased Sox21.S promoting increased expression of sox21.L. Our findings shed light on the intricate concentration-dependent roles of Sox21 homeologs in Xenopus neurogenesis.

SRY HMG 盒转录因子 Sox21 在神经发生过程中发挥着多种关键作用,其功能取决于浓度和发育阶段。之前的研究主要集中在 Sox21.S,但其氨基酸序列存在差异,缺乏保守的多 A 链,与祖先同源物的相似性更高。相比之下,Sox21.L 与小鼠和小鸡 Sox21 的序列相似度较高。为了确定 Sox21.S 和 Sox21.L 是否具有不同的功能,我们在爪蟾胚胎中进行了功能增益和功能缺失研究。我们的研究发现,Sox21.S和Sox21.L在功能上是多余的,但Sox21.L比Sox21.S在驱动变化方面更有效。这些结果也支持了我们早些时候在外胚层外植体中的发现,证明了Sox21的功能是剂量依赖性的。虽然 Sox21 是初级神经元形成所必需的,但高水平的 Sox21 会阻碍初级神经元的形成。我们的发现揭示了 Sox21 同源物在爪蟾神经发生过程中复杂的浓度依赖性作用。
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引用次数: 0
Two decades on: Special issue on olfaction celebrating Axel and Buck's Nobel Prize 二十年后:庆祝阿克塞尔和巴克获得诺贝尔奖的嗅觉特刊。
IF 2.4 4区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2024-07-26 DOI: 10.1002/dvg.23613
Paolo E. Forni, C. Ron Yu
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引用次数: 0
The influence of olfactory experience on the birthrates of olfactory sensory neurons with specific odorant receptor identities 嗅觉经验对具有特定气味受体特征的嗅觉神经元出生率的影响
IF 1.5 4区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-06-18 DOI: 10.1002/dvg.23611
Karlin E. Rufenacht, Alexa J. Asson, Kawsar Hossain, Stephen W. Santoro

Olfactory sensory neurons (OSNs) are one of a few neuron types that are generated continuously throughout life in mammals. The persistence of olfactory sensory neurogenesis beyond early development has long been thought to function simply to replace neurons that are lost or damaged through exposure to environmental insults. The possibility that olfactory sensory neurogenesis may also serve an adaptive function has received relatively little consideration, largely due to the assumption that the generation of new OSNs is stochastic with respect to OSN subtype, as defined by the single odorant receptor gene that each neural precursor stochastically chooses for expression out of hundreds of possibilities. Accordingly, the relative birthrates of different OSN subtypes are predicted to be constant and impervious to olfactory experience. This assumption has been called into question, however, by evidence that the birthrates of specific OSN subtypes can be selectively altered by manipulating olfactory experience through olfactory deprivation, enrichment, and conditioning paradigms. Moreover, studies of recovery of the OSN population following injury provide further evidence that olfactory sensory neurogenesis may not be strictly stochastic with respect to subtype. Here we review this evidence and consider mechanistic and functional implications of the prospect that specific olfactory experiences can regulate olfactory sensory neurogenesis rates in a subtype-selective manner.

嗅觉神经元(OSN)是哺乳动物一生中持续生成的少数神经元类型之一。长期以来,人们一直认为嗅觉神经元在早期发育之后仍能持续生成,其功能仅仅是替代因暴露于环境中而丢失或受损的神经元。嗅觉神经发生也可能具有适应功能,但这种可能性相对较少被考虑,这主要是由于人们假设新的嗅觉神经元的产生与嗅觉神经元亚型有关,是随机的,这是由每个神经前体从数百种可能性中随机选择表达的单一气味受体基因所定义的。因此,不同 OSN 亚型的相对出生率被认为是恒定的,不受嗅觉经验的影响。然而,有证据表明,特定 OSN 亚型的出生率可以通过嗅觉剥夺、富集和条件反射等范式操纵嗅觉体验,从而有选择性地改变,这就对上述假设提出了质疑。此外,对受伤后 OSN 群体恢复的研究也进一步证明,嗅觉神经发生在亚型方面可能不是严格随机的。在此,我们回顾了这些证据,并考虑了特定嗅觉体验能以亚型选择性方式调节嗅觉神经发生率这一前景的机理和功能意义。
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引用次数: 0
Roles of odorant receptors during olfactory glomerular map formation 嗅觉肾小球图形成过程中气味受体的作用
IF 1.5 4区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-06-14 DOI: 10.1002/dvg.23610
Ai Nakashima, Haruki Takeuchi

The organization of the olfactory glomerular map involves the convergence of olfactory sensory neurons (OSNs) expressing the same odorant receptor (OR) into glomeruli in the olfactory bulb (OB). A remarkable feature of the olfactory glomerular map formation is that the identity of OR instructs the topography of the bulb, resulting in thousands of discrete glomeruli in mice. Several lines of evidence indicate that ORs control the expression levels of various kinds of transmembrane proteins to form glomeruli at appropriate regions of the OB. In this review, we will discuss how the OR identity is decoded by OSNs into gene expression through intracellular regulatory mechanisms.

嗅球图的组织涉及表达相同气味受体(OR)的嗅觉神经元(OSN)在嗅球(OB)中汇聚成球。嗅球图形成的一个显著特点是,OR的特性会指示嗅球的地形,从而在小鼠体内形成数千个离散的嗅球。有多种证据表明,嗅源控制各种跨膜蛋白的表达水平,从而在嗅球的适当区域形成肾小球。在这篇综述中,我们将讨论OSN如何通过细胞内调控机制将OR特性解码为基因表达。
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引用次数: 0
CircSCNN1A inhibits the proliferation, migration and invasion of renal cell carcinoma cells by decreasing CLDN8 expression through miR-590-5p CircSCNN1A 通过 miR-590-5p 降低 CLDN8 的表达,从而抑制肾细胞癌细胞的增殖、迁移和侵袭。
IF 1.5 4区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-05-19 DOI: 10.1002/dvg.23599
Tingting Guo, Wanjuan Xiong, Chong Liu, Li Zhu, Ling Xie

Background

Increasing evidence suggests that circular RNA (circRNA) plays a regulatory role in the progression of renal cell carcinoma (RCC). However, the precise function and underlying mechanism of circSCNN1A in RCC progression still remain unclear.

Methods

The expression levels of circSCNN1A, microRNA-590-5p (miR-590-5p), claudin 8 (CLDN8), cyclin D1, matrix metalloprotein 2 (MMP2), MMP9, E-cadherin, N-cadherin and vimentin were detected by a quantitative real-time polymerase chain reaction and Western blotting analysis. Immunohistochemistry assay was performed to analyze the positive expression rate of CLDN8. Cell proliferation was investigated by cell colony formation, 5-Ethynyl-2′-deoxyuridine and DNA content quantitation assays. Cell migration and invasion were assessed by wound-healing and transwell invasion assays. Interactions among circSCNN1A, miR-590-5p and CLDN8 were identified by dual-luciferase reporter assay, RNA immunoprecipitation assay and RNA pull-down assay. Xenograft mouse model assay was conducted to verify the effect of circSCNN1A on tumor formation in vivo.

Results

CircSCNN1A and CLDN8 expression were significantly downregulated, while miR-590-5p was upregulated in both RCC tissues and cells. CircSCNN1A overexpression inhibited RCC cell proliferation, migration and invasion, accompanied by decreases of cyclin D1, MMP2, MMP9, N-cadherin and vimentin expression and an increase of E-cadherin expression. CircSCNN1A acted as a miR-590-5p sponge and regulated RCC cell processes by binding to miR-590-5p. CLDN8, a target gene of miR-590-5p, was involved in the regulation of the biological behaviors of RCC cells by miR-590-5p. In addition, circSCNN1A induced CLDN8 production by interacting with miR-590-5p. Further, circSCNN1A suppressed tumor formation in vivo.

Conclusion

CircSCNN1A inhibited RCC cell proliferation, migration and invasion by regulating the miR-590-5p/CLDN8 pathway.

背景:越来越多的证据表明,环状 RNA(circRNA)在肾细胞癌(RCC)的进展过程中发挥着调控作用。然而,circSCNN1A在RCC进展中的确切功能和内在机制仍不清楚:方法:采用实时定量聚合酶链反应和 Western 印迹分析法检测 circSCNN1A、microRNA-590-5p(miR-590-5p)、claudin 8(CLDN8)、细胞周期蛋白 D1、基质金属蛋白 2(MMP2)、MMP9、E-钙粘连蛋白、N-钙粘连蛋白和波形蛋白的表达水平。免疫组化法分析了 CLDN8 的阳性表达率。通过细胞集落形成、5-乙炔基-2'-脱氧尿苷和 DNA 含量定量检测来研究细胞增殖。细胞迁移和侵袭通过伤口愈合和跨孔侵袭试验进行评估。通过双荧光素酶报告实验、RNA 免疫沉淀实验和 RNA 牵引实验确定了 circSCNN1A、miR-590-5p 和 CLDN8 之间的相互作用。通过异种移植小鼠模型试验验证了 circSCNN1A 对体内肿瘤形成的影响:结果:在 RCC 组织和细胞中,CircSCNN1A 和 CLDN8 的表达均显著下调,而 miR-590-5p 则上调。CircSCNN1A的过表达抑制了RCC细胞的增殖、迁移和侵袭,同时降低了细胞周期蛋白D1、MMP2、MMP9、N-粘连蛋白和波形蛋白的表达,增加了E-粘连蛋白的表达。CircSCNN1A作为miR-590-5p海绵,通过与miR-590-5p结合来调控RCC细胞的进程。miR-590-5p的靶基因CLDN8参与了miR-590-5p对RCC细胞生物学行为的调控。此外,circSCNN1A通过与miR-590-5p相互作用诱导CLDN8的产生。此外,circSCNN1A还抑制了体内肿瘤的形成:结论:circSCNN1A通过调节miR-590-5p/CLDN8通路抑制了RCC细胞的增殖、迁移和侵袭。
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引用次数: 0
Phosphodiesterase 5A regulates the vomeronasal pump in mice 磷酸二酯酶 5A 调节小鼠的绒毛膜泵
IF 1.5 4区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-05-13 DOI: 10.1002/dvg.23603
Dennean S. Lippner, Jiang Xu, Siqi Ma, Johannes Reisert, Haiqing Zhao

The vomeronasal organ (VNO) is a specialized chemoreceptive structure in many vertebrates that detects chemical stimuli, mostly pheromones, which often elicit innate behaviors such as mating and aggression. Previous studies in rodents have demonstrated that chemical stimuli are actively transported to the VNO via a blood vessel-based pumping mechanism, and this pumping mechanism is necessary for vomeronasal stimulation in behaving animals. However, the molecular mechanisms that regulate the vomeronasal pump remain mostly unknown. In this study, we observed a high level of expression of phosphodiesterase 5A (PDE5A) in the vomeronasal blood vessel of mice. We provided evidence to support the potential role of PDE5A in vomeronasal pump regulation. Local application of PDE5A inhibitors—sildenafil or tadalafil—to the vomeronasal organ (VNO) reduced stimulus delivery into the VNO, decreased the pheromone-induced activity of vomeronasal sensory neurons, and attenuated male–male aggressive behaviors. PDE5A is well known to play a role in regulating blood vessel tone in several organs. Our study advances our understanding of the molecular regulation of the vomeronasal pump.

绒毛膜促性腺激素器官(VNO)是许多脊椎动物的一种特化化学感受结构,它能检测化学刺激,主要是信息素,这些刺激通常会引起交配和攻击等先天性行为。以前在啮齿动物身上进行的研究已经证明,化学刺激会通过一种基于血管的泵机制被主动输送到 VNO,而这种泵机制对于行为动物的绒毛刺激是必要的。然而,调控绒毛膜促性腺激素泵的分子机制大多仍不为人所知。在这项研究中,我们观察到小鼠绒毛膜血管中磷酸二酯酶 5A(PDE5A)的高水平表达。我们提供的证据支持了 PDE5A 在绒毛膜泵调节中的潜在作用。在绒球器官(VNO)局部应用PDE5A抑制剂--西地那非或他达拉非,可减少进入VNO的刺激,降低信息素诱导的绒球感觉神经元的活性,并减轻雄性-雄性之间的攻击行为。众所周知,PDE5A 在多个器官的血管张力调节中发挥作用。我们的研究加深了我们对绒毛膜促性腺激素泵分子调控的理解。
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引用次数: 0
CRISPR-Cas9 delivery strategies and applications: Review and update CRISPR-Cas9 传输策略和应用:回顾与更新。
IF 1.5 4区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-05-10 DOI: 10.1002/dvg.23598
Ali Alizadeh Severi, Bahman Akbari

Nowadays, a significant part of the investigations carried out in the medical field belong to cancer treatment. Generally, conventional cancer treatments, including chemotherapy, radiotherapy, and surgery, which have been used for a long time, are not sufficient, especially in malignant cancers. Because genetic mutations cause cancers, researchers are trying to treat these diseases using genetic engineering tools. One of them is clustered regularly interspaced short palindromic repeats (CRISPR), a powerful tool in genetic engineering in the last decade. CRISPR, which forms the CRISPR-Cas structure with its endonuclease protein, Cas, is known as a part of the immune system (adaptive immunity) in bacteria and archaea. Among the types of Cas proteins, Cas9 endonuclease has been used in many scientific studies due to its high accuracy and efficiency. This review reviews the CRISPR system, focusing on the history, classification, delivery methods, applications, new generations, and challenges of CRISPR-Cas9 technology.

如今,医学领域开展的研究有很大一部分与癌症治疗有关。一般来说,传统的癌症治疗方法,包括化疗、放疗和手术,已经使用了很长时间,但效果并不理想,尤其是对恶性癌症。由于基因突变会导致癌症,研究人员正试图利用基因工程工具来治疗这些疾病。其中之一就是簇状规则间隔短回文重复序列(CRISPR),它是近十年来基因工程领域的一个强大工具。众所周知,CRISPR 与其内切酶蛋白 Cas 组成 CRISPR-Cas 结构,是细菌和古细菌免疫系统(适应性免疫)的一部分。在各种类型的 Cas 蛋白中,Cas9 内切酶因其高精确度和高效率而被许多科学研究采用。这篇综述回顾了CRISPR系统,重点介绍了CRISPR-Cas9技术的历史、分类、传递方法、应用、新一代产品和挑战。
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引用次数: 0
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