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Global research trends in non-coding RNA and intestinal epithelial homeostasis: an integrated bibliometric analysis (2007-2024). 非编码RNA和肠上皮稳态的全球研究趋势:综合文献计量分析(2007-2024)。
IF 2.5 3区 生物学 Pub Date : 2025-10-17 DOI: 10.1186/s41065-025-00560-y
Xinxin Wang, Xuan Li, Yongtian Wen, Bochao Yuan, Xudong Tang, Ting Chen
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引用次数: 0
Integrating single-cell RNA sequencing and Mendelian randomization analysis to identify potential drug targets for dilated cardiomyopathy. 整合单细胞RNA测序和孟德尔随机化分析以确定扩张型心肌病的潜在药物靶点。
IF 2.5 3区 生物学 Pub Date : 2025-10-16 DOI: 10.1186/s41065-025-00539-9
Ruikang Liu, Yiying Liu, Chao Meng, Jun Li, Hui Wang, Xuanchun Huang, Shiyi Tao, Xiao Xia, Lilan Su, Yonghao Li, Weiming Fan, Chiyun Sun
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引用次数: 0
Correction: Decoding the PTTG family's contribution to LUAD pathogenesis: a comprehensive study on expression, epigenetics, and therapeutic interventions. 纠正:解码PTTG家族对LUAD发病机制的贡献:一项关于表达、表观遗传学和治疗干预的综合研究。
IF 2.5 3区 生物学 Pub Date : 2025-10-15 DOI: 10.1186/s41065-025-00582-6
Jinna Di, Li Tian, Fan Yan, Zhang Zhe, Cai Lin, Liu Jingyu
{"title":"Correction: Decoding the PTTG family's contribution to LUAD pathogenesis: a comprehensive study on expression, epigenetics, and therapeutic interventions.","authors":"Jinna Di, Li Tian, Fan Yan, Zhang Zhe, Cai Lin, Liu Jingyu","doi":"10.1186/s41065-025-00582-6","DOIUrl":"10.1186/s41065-025-00582-6","url":null,"abstract":"","PeriodicalId":12862,"journal":{"name":"Hereditas","volume":"162 1","pages":"210"},"PeriodicalIF":2.5,"publicationDate":"2025-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12529791/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145299724","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Jianpi Qutan Decoction improves hepatic lipid metabolism in atherosclerosis mice via PPARα-CPT1α pathway regulation. 健脾祛痰汤通过调控PPARα-CPT1α通路改善动脉粥样硬化小鼠肝脏脂质代谢。
IF 2.5 3区 生物学 Pub Date : 2025-10-15 DOI: 10.1186/s41065-025-00580-8
Xiaoyu Gao, Ying Hai, Dan Ma, Lisi Liu, Ying Pei, Jie Li, Wenping Wang

Objective: To investigate Jianpi Qutan Decoction (JPQT)'s effects on hepatic lipid metabolism via the PPARα-CPT1α pathway.

Methods: Eight male C57BL/6J mice served as controls; 32 ApoE-/- mice were randomized into atherosclerosis (AS), atorvastatin calcium (AC), and low/medium/high-dose JPQT groups. Prior to the intervention, therapeutic targets of JPQT were analyzed using network pharmacology to provide a theoretical basis for subsequent experiments. The AS model was induced by a 12-week high-fat diet. Hepatic triglyceride (TG) and cholesterol (TC) were measured via GPO-PAP. Glucose tolerance (GTT) and insulin tolerance (ITT) were assessed. Pro-inflammatory cytokines were analyzed by ELISA/colorimetry. Fatty acid metabolism enzymes were evaluated using kits. PPARα-CPT1α pathway mRNA and protein expression were quantified via qPCR and Western blot.

Results: JPQT and AC reduced aortic plaque lipid deposition. JPQT significantly lowered hepatic TG/TC, blood glucose, insulin, and inflammation. It modulated fatty acid metabolism by promoting ACC phosphorylation, suppressing FAS and FFA while elevating FAβO, with dose-dependent efficacy. Additionally, JPQT upregulated PPARα, CPT1α, and ACOX1 mRNA and protein expression in the liver.

Conclusion: JPQT may improves lipid metabolism and reduces AS progression by activating the PPARα-CPT1α pathway, with higher doses yielding stronger effects.

目的:探讨健脾祛痰汤通过PPARα-CPT1α通路对肝脏脂质代谢的影响。方法:8只雄性C57BL/6J小鼠作为对照;32只ApoE-/-小鼠随机分为动脉粥样硬化(AS)组、阿托伐他汀钙(AC)组和JPQT低/中/高剂量组。干预前利用网络药理学分析JPQT的治疗靶点,为后续实验提供理论基础。采用高脂饲料12周建立AS模型。GPO-PAP法测定肝脏甘油三酯(TG)和胆固醇(TC)。评估葡萄糖耐量(GTT)和胰岛素耐量(ITT)。采用ELISA/比色法分析促炎细胞因子。采用试剂盒检测脂肪酸代谢酶。通过qPCR和Western blot检测PPARα-CPT1α通路mRNA和蛋白的表达。结果:JPQT联合AC可减少主动脉斑块脂质沉积。JPQT显著降低肝脏TG/TC、血糖、胰岛素和炎症。它通过促进ACC磷酸化,抑制FAS和FFA,升高FAβO来调节脂肪酸代谢,具有剂量依赖性。此外,JPQT上调肝脏中PPARα、CPT1α和ACOX1 mRNA和蛋白的表达。结论:JPQT可能通过激活PPARα-CPT1α途径改善脂质代谢,减缓AS进展,且剂量越大作用越强。
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引用次数: 0
BMAL1 alleviates sepsis-induced acute kidney injury by inhibiting apoptosis, ferroptosis and inflammation. BMAL1通过抑制细胞凋亡、铁下垂和炎症来减轻脓毒症引起的急性肾损伤。
IF 2.5 3区 生物学 Pub Date : 2025-10-14 DOI: 10.1186/s41065-025-00583-5
Zhipan Chen, Gaoze Chen, Jinhui Shi, Litong Jin

Background: Sepsis is a life-threatening syndrome characterized by organ dysfunction. The kidney is one of the earliest organs to be injured during sepsis. Basic Helix-Loop-Helix ARNT Like 1 (BMAL1) was shown to play a critical role in immune responses. BMAL1 deregulation is related to sepsis-induced injury. Thus, correct understanding of the molecular mechanism of BMAL1 in sepsis-induced acute kidney injury (AKI) may be importance for seeking effective targeted therapy.

Methods: Lipopolysaccharide (LPS)-induced renal tubular epithelial cells (HK-2 cells) and a sepsis-AKI model established in C57BL/6 mice using cecal ligation and puncture (CLP) were used for functional analyses. In vitro analyses were conducted using EdU assay, flow cytometry, MTT assay and ELISA, respectively. Levels of mRNA and protein expression were using qRT-PCR and western blotting. Cellular ubiquitination analyzed the ubiquitination effect of USP10 on BMAL1. The binding of HOXA5 to BMAL1 promoter was verified using Chromatin immunoprecipitation and Luciferase reporter assays.

Results: BMAL1 overexpression reversed LPS-induced apoptosis, inflammation and ferroptosis in HK-2 cells, as well as attenuated sepsis-induced AKI in mouse models. Mechanistically, USP10 bound to BMAL1 and positively modulated BMAL1 expression by reducing BMAL1 ubiquitination. In addition, HOXA5 induced BMAL1 transcription. Moreover, USP10 or HOXA5 overexpression reversed LPS-induced apoptosis, inflammation and ferroptosis in HK-2 cells, which could be rescued by BMAL1 decrease.

Conclusion: BMAL1 overexpression mediated by USP10-induced deubiquitination or HOXA5-induced transcription can attenuate sepsis-induced acute kidney injury, recommending a novel insight for the prevention of sepsis-induced AKI.

背景:脓毒症是一种以器官功能障碍为特征的危及生命的综合征。肾脏是败血症中最早受伤的器官之一。Basic Helix-Loop-Helix ARNT Like 1 (BMAL1)在免疫应答中起关键作用。BMAL1失调与败血症所致损伤有关。因此,正确认识BMAL1在脓毒症诱导的急性肾损伤(AKI)中的分子机制可能对寻求有效的靶向治疗具有重要意义。方法:采用脂多糖(LPS)诱导的肾小管上皮细胞(HK-2细胞)和盲肠结扎穿刺法(CLP)建立的C57BL/6小鼠脓毒症- aki模型进行功能分析。体外分别采用EdU法、流式细胞术、MTT法和ELISA法进行分析。采用qRT-PCR和western blotting检测mRNA和蛋白表达水平。细胞泛素化分析USP10对BMAL1的泛素化作用。利用染色质免疫沉淀和荧光素酶报告基因检测证实了HOXA5与BMAL1启动子的结合。结果:BMAL1过表达可逆转lps诱导的HK-2细胞凋亡、炎症和铁凋亡,并可减轻小鼠脓毒症诱导的AKI。机制上,USP10结合BMAL1并通过降低BMAL1泛素化正向调节BMAL1的表达。此外,HOXA5诱导BMAL1转录。此外,USP10或HOXA5过表达可逆转lps诱导的HK-2细胞凋亡、炎症和铁凋亡,而BMAL1的降低可挽救这些细胞。结论:通过usp10诱导的去泛素化或hoxa5诱导的转录介导BMAL1过表达可减轻败血症诱导的急性肾损伤,为预防败血症诱导的AKI提供了新的思路。
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引用次数: 0
Quantitative study and related factors analysis of sciatic neuropathy in type 2 diabetes mellitus patients by elastic imaging virtual tissue imaging quantification technique. 弹性成像虚拟组织成像量化技术对2型糖尿病患者坐骨神经病变的定量研究及相关因素分析。
IF 2.5 3区 生物学 Pub Date : 2025-10-10 DOI: 10.1186/s41065-025-00565-7
Ruixing Liu, Beibei Yu, Gaopan Cao, Lina Ye, Dan Zhang

Background: The incidence of diabetic peripheral neuropathy (DPN) is increasing every year for type 2 diabetes mellitus (T2DM) patients, and diabetic polyneuropathy is a common type.

Objective: To quantify and analyze the factors associated with diabetic polyneuropathy using the virtual tissue imaging quantification (VTIQ) technique.

Method: 182 patients with T2DM, 137 patients with diabetic polyneuropathy, and 198 healthy volunteers were included in this retrospective cross-sectional diagnostic study. Sciatic neuropathy was evaluated through Doppler ultrasound examination with a VTIQ quantitative analysis system to acquire elastic modulus, cross-sectional area (CSA) and shear wave velocity (SWV). Nerve conduction velocity (NCV) was also evaluated via neurophysiological examination. Logistic regression was used to analyze odds ratios (OR) related diabetic polyneuropathy. The diagnostic accuracy of the VTIQ technique-acquired index on diabetic polyneuropathy was analyzed using the receiver operating characteristic (ROC) curve.

Results: VTIQ technique-acquired indexes all differed significantly among three study groups, among which Elastic modulus and CSA were independently related to diabetic polyneuropathy risk according to the logistic regression analysis. NCV was also an independent risk factor for diabetic polyneuropathy. ROC analysis revealed that Elastic modulus, CSA and NCV can distinguish diabetic polyneuropathy patients from T2DM cases with the AUC of 0.797, 0.654 and 0.775 respectively. But their combination achieved the highest diagnostic value (AUC = 0.883). CSA and SWV of the sciatic nerve are positively correlated with visual analog scale (VAS) scores.

Conclusion: VTIQ technology contributes to the diagnosis of diabetic polyneuropathy, it can improve the diagnostic value of neurophysiological examination on sciatic neuropathy for T2DM patients.

背景:糖尿病周围神经病变(DPN)在2型糖尿病(T2DM)患者中的发病率逐年上升,其中糖尿病多发神经病变是一种常见的病变类型。目的:应用虚拟组织成像量化(VTIQ)技术对糖尿病多发神经病变的相关因素进行量化分析。方法:对182例T2DM患者、137例糖尿病多发神经病变患者和198名健康志愿者进行回顾性横断面诊断研究。采用VTIQ定量分析系统对坐骨神经病变进行多普勒超声检查,获取弹性模量、横截面积(CSA)和横波速度(SWV)。神经生理检查评估神经传导速度(NCV)。采用Logistic回归分析优势比(OR)相关的糖尿病多发性神经病。采用受试者工作特征(ROC)曲线分析VTIQ技术获得指数对糖尿病多发性神经病变的诊断准确性。结果:三个研究组的VTIQ技术获得指标均有显著性差异,其中弹性模量和CSA与糖尿病多发性神经病变风险独立相关。NCV也是糖尿病多发神经病变的独立危险因素。ROC分析显示,弹性模量、CSA和NCV可以区分糖尿病多发神经病变与T2DM, AUC分别为0.797、0.654和0.775。但两者联合诊断价值最高(AUC = 0.883)。坐骨神经CSA、SWV与视觉模拟评分(VAS)呈正相关。结论:VTIQ技术有助于糖尿病多发神经病变的诊断,可提高神经生理检查对T2DM患者坐骨神经病变的诊断价值。
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引用次数: 0
Hsa_circ_0071271 affected the progression of non-small cell lung cancer through miR-23a-5p. Hsa_circ_0071271通过miR-23a-5p影响非小细胞肺癌的进展。
IF 2.5 3区 生物学 Pub Date : 2025-10-10 DOI: 10.1186/s41065-025-00575-5
Ye Wu, Ling Zhang, Wenhui Li, Dong Yan, Jingjing Yue, Zhusheng Liu

Background: Lung cancer ranks among the most prevalent malignancies globally, with non-small cell lung cancer (NSCLC) constituting the predominant subtype. Currently, there are limitations in the treatment options and prognostic evaluation for NSCLC. Hsa_circ_0071271, a non-coding RNA, has an unclear expression and mechanism in NSCLC treatment. In this study, the impacts of hsa_circ_0071271 on NSCLC progression/prognosis and the possible mechanism of its inhibitory role in NSCLC progression through miR-23a-5p were investigated.

Methods: This investigation employed RT-qPCR to initially determine the expression levels of hsa_circ_0071271 in NSCLC tissues and cell lines. To evaluate the clinical significance of hsa_circ_0071271, ROC curve analysis, Kaplan-Meier survival analysis, and Cox regression were conducted. The impact of hsa_circ_0071271 knockdown on NSCLC cell lines A549 and CALU3 was examined through CCK-8 assays, flow cytometry, and transwell assays, corresponding to cell proliferation, apoptosis, and migration/invasion. The dual-luciferase reporter assay was used to examine the relationships between miR-23a-5p and hsa_circ_0071271, as well as between PTEN and miR-23a-5p. Pearson correlation analysis was conducted to assess the correlation between PTEN and miR-23a-5p. Subsequent experiments with CCK-8, flow cytometry, and transwell assays were carried out to explore how hsa_circ_0071271 regulates miR-23a-5p/PTEN and thereby affects NSCLC cell proliferation, apoptosis, migration, and invasion.

Results: Hsa_circ_0071271 was expressed highly in NSCLC tissues and multiple cell lines. Hsa_circ_0071271 effectively distinguishes tumor tissues from normal ones and is associated with patient survival rates. Knocking down hsa_circ_0071271 inhibits NSCLC cell proliferation and migration/invasion while promoting apoptosis. The study also revealed an interaction between hsa_circ_0071271 and miR-23a-5p, as well as between PTEN and miR-23a-5p, with their expression levels showing a significant negative correlation. Further experiments indicated that hsa_circ_0071271 regulates miR-23a-5p/PTEN to suppress NSCLC cell proliferation, migration, and invasion and promote apoptosis.

Conclusions: Regulating miR-23a-5p/PTEN by hsa_circ_0071271 knockdown has been found to inhibit NSCLC cell proliferation, migration and invasion, as well as promote apoptosis.

背景:肺癌是全球最常见的恶性肿瘤之一,非小细胞肺癌(NSCLC)是主要亚型。目前,在非小细胞肺癌的治疗选择和预后评估方面存在局限性。Hsa_circ_0071271是一种非编码RNA,在NSCLC治疗中的表达和机制尚不清楚。本研究探讨了hsa_circ_0071271对NSCLC进展/预后的影响,以及其通过miR-23a-5p抑制NSCLC进展的可能机制。方法:采用RT-qPCR初步测定hsa_circ_0071271在NSCLC组织和细胞系中的表达水平。为评价hsa_circ_0071271的临床意义,采用ROC曲线分析、Kaplan-Meier生存分析和Cox回归分析。通过CCK-8实验、流式细胞术和transwell实验检测hsa_circ_0071271敲低对NSCLC细胞系A549和CALU3细胞增殖、凋亡和迁移/侵袭的影响。双荧光素酶报告试验用于检测miR-23a-5p与hsa_circ_0071271之间的关系,以及PTEN与miR-23a-5p之间的关系。采用Pearson相关分析评估PTEN与miR-23a-5p的相关性。随后通过CCK-8、流式细胞术和transwell实验,探讨hsa_circ_0071271如何调节miR-23a-5p/PTEN,从而影响NSCLC细胞的增殖、凋亡、迁移和侵袭。结果:Hsa_circ_0071271在NSCLC组织和多种细胞系中高表达。Hsa_circ_0071271能有效区分肿瘤组织与正常组织,并与患者生存率相关。敲低hsa_circ_0071271可抑制NSCLC细胞增殖和迁移/侵袭,同时促进细胞凋亡。本研究还发现hsa_circ_0071271与miR-23a-5p、PTEN与miR-23a-5p之间存在相互作用,其表达水平呈显著负相关。进一步实验表明,hsa_circ_0071271调控miR-23a-5p/PTEN抑制NSCLC细胞增殖、迁移、侵袭,促进细胞凋亡。结论:通过hsa_circ_0071271敲低调控miR-23a-5p/PTEN可抑制NSCLC细胞增殖、迁移和侵袭,促进细胞凋亡。
{"title":"Hsa_circ_0071271 affected the progression of non-small cell lung cancer through miR-23a-5p.","authors":"Ye Wu, Ling Zhang, Wenhui Li, Dong Yan, Jingjing Yue, Zhusheng Liu","doi":"10.1186/s41065-025-00575-5","DOIUrl":"10.1186/s41065-025-00575-5","url":null,"abstract":"<p><strong>Background: </strong>Lung cancer ranks among the most prevalent malignancies globally, with non-small cell lung cancer (NSCLC) constituting the predominant subtype. Currently, there are limitations in the treatment options and prognostic evaluation for NSCLC. Hsa_circ_0071271, a non-coding RNA, has an unclear expression and mechanism in NSCLC treatment. In this study, the impacts of hsa_circ_0071271 on NSCLC progression/prognosis and the possible mechanism of its inhibitory role in NSCLC progression through miR-23a-5p were investigated.</p><p><strong>Methods: </strong>This investigation employed RT-qPCR to initially determine the expression levels of hsa_circ_0071271 in NSCLC tissues and cell lines. To evaluate the clinical significance of hsa_circ_0071271, ROC curve analysis, Kaplan-Meier survival analysis, and Cox regression were conducted. The impact of hsa_circ_0071271 knockdown on NSCLC cell lines A549 and CALU3 was examined through CCK-8 assays, flow cytometry, and transwell assays, corresponding to cell proliferation, apoptosis, and migration/invasion. The dual-luciferase reporter assay was used to examine the relationships between miR-23a-5p and hsa_circ_0071271, as well as between PTEN and miR-23a-5p. Pearson correlation analysis was conducted to assess the correlation between PTEN and miR-23a-5p. Subsequent experiments with CCK-8, flow cytometry, and transwell assays were carried out to explore how hsa_circ_0071271 regulates miR-23a-5p/PTEN and thereby affects NSCLC cell proliferation, apoptosis, migration, and invasion.</p><p><strong>Results: </strong>Hsa_circ_0071271 was expressed highly in NSCLC tissues and multiple cell lines. Hsa_circ_0071271 effectively distinguishes tumor tissues from normal ones and is associated with patient survival rates. Knocking down hsa_circ_0071271 inhibits NSCLC cell proliferation and migration/invasion while promoting apoptosis. The study also revealed an interaction between hsa_circ_0071271 and miR-23a-5p, as well as between PTEN and miR-23a-5p, with their expression levels showing a significant negative correlation. Further experiments indicated that hsa_circ_0071271 regulates miR-23a-5p/PTEN to suppress NSCLC cell proliferation, migration, and invasion and promote apoptosis.</p><p><strong>Conclusions: </strong>Regulating miR-23a-5p/PTEN by hsa_circ_0071271 knockdown has been found to inhibit NSCLC cell proliferation, migration and invasion, as well as promote apoptosis.</p>","PeriodicalId":12862,"journal":{"name":"Hereditas","volume":"162 1","pages":"206"},"PeriodicalIF":2.5,"publicationDate":"2025-10-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12512256/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145274471","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Regulatory effect of miR-142-5p on inflammatory process of sepsis by targeting CXCL8. miR-142-5p靶向CXCL8对脓毒症炎症过程的调控作用
IF 2.5 3区 生物学 Pub Date : 2025-10-09 DOI: 10.1186/s41065-025-00567-5
Ling Wu, Qiqi Shen, Xue Yu, Youfu Li, Dongcai Feng

Background: Sepsis is a life-threatening systemic inflammatory response triggered by infection. The rapid progression of the disease necessitates early diagnosis and precise intervention, making the identification of reliable biomarkers and therapeutic targets crucial for improving clinical outcomes and reducing sepsis-related mortality.

Aim: Exploring miR-142-5p as a novel diagnostic biomarker for sepsis and its therapeutic potential via targeting CXCL8.

Methods: The expression levels of inflammatory factors (IL-6, TNF-α, IL-1β) and miR-142-5p in the serum of patients with sepsis and healthy controls were detected by ELISA and qPCR methods respectively. The diagnostic potential of miR-142-5p was evaluated using Pearson correlation, ROC curve, and logistic regression analyses. Bioinformatic prediction and dual-luciferase assays identified CXCL8 as a target, while LPS-induced models and cell transfection experiments investigated miR-142-5p's therapeutic effects through CXCL8 regulation.

Results: Sepsis patients exhibited significantly decreased miR-142-5p expression, inversely correlating with inflammatory markers (IL-6, TNF-α, IL-1β). ROC analysis showed excellent diagnostic value (AUC = 0.917). Pearson correlations indicated significant clinical associations, while logistic regression identified miR-142-5p as an independent protective factor (HR = 0.498, 95% CI:0.282-0.882, P = 0.017). LPS models confirmed miR-142-5p's anti-inflammatory effects through cytokine suppression, with knockdown showing opposite effects. Mechanistically, dual-luciferase and transfection assays verified CXCL8 as a direct target mediating these effects.

Conclusion: miR-142-5p may alleviate sepsis by targeting CXCL8-mediated inflammation, suggesting its potential as a diagnostic biomarker and therapeutic target.

背景:脓毒症是由感染引发的危及生命的全身炎症反应。疾病的快速发展需要早期诊断和精确干预,因此确定可靠的生物标志物和治疗靶点对于改善临床结果和降低败血症相关死亡率至关重要。目的:通过靶向CXCL8,探索miR-142-5p作为脓毒症新的诊断生物标志物及其治疗潜力。方法:采用ELISA法和qPCR法分别检测脓毒症患者和健康对照组血清中炎症因子(IL-6、TNF-α、IL-1β)和miR-142-5p的表达水平。采用Pearson相关、ROC曲线和logistic回归分析评估miR-142-5p的诊断潜力。生物信息学预测和双荧光素酶测定确定了CXCL8为靶点,lps诱导模型和细胞转染实验研究了miR-142-5p通过CXCL8调控的治疗作用。结果:脓毒症患者miR-142-5p表达显著降低,与炎症标志物(IL-6、TNF-α、IL-1β)呈负相关。ROC分析显示良好的诊断价值(AUC = 0.917)。Pearson相关性显示显著的临床相关性,而logistic回归发现miR-142-5p是一个独立的保护因素(HR = 0.498, 95% CI:0.282-0.882, P = 0.017)。LPS模型通过抑制细胞因子证实了miR-142-5p的抗炎作用,而敲低则相反。机制上,双荧光素酶和转染实验证实CXCL8是介导这些作用的直接靶点。结论:miR-142-5p可能通过靶向cxcl8介导的炎症来缓解脓毒症,提示其作为诊断生物标志物和治疗靶点的潜力。
{"title":"Regulatory effect of miR-142-5p on inflammatory process of sepsis by targeting CXCL8.","authors":"Ling Wu, Qiqi Shen, Xue Yu, Youfu Li, Dongcai Feng","doi":"10.1186/s41065-025-00567-5","DOIUrl":"10.1186/s41065-025-00567-5","url":null,"abstract":"<p><strong>Background: </strong>Sepsis is a life-threatening systemic inflammatory response triggered by infection. The rapid progression of the disease necessitates early diagnosis and precise intervention, making the identification of reliable biomarkers and therapeutic targets crucial for improving clinical outcomes and reducing sepsis-related mortality.</p><p><strong>Aim: </strong>Exploring miR-142-5p as a novel diagnostic biomarker for sepsis and its therapeutic potential via targeting CXCL8.</p><p><strong>Methods: </strong>The expression levels of inflammatory factors (IL-6, TNF-α, IL-1β) and miR-142-5p in the serum of patients with sepsis and healthy controls were detected by ELISA and qPCR methods respectively. The diagnostic potential of miR-142-5p was evaluated using Pearson correlation, ROC curve, and logistic regression analyses. Bioinformatic prediction and dual-luciferase assays identified CXCL8 as a target, while LPS-induced models and cell transfection experiments investigated miR-142-5p's therapeutic effects through CXCL8 regulation.</p><p><strong>Results: </strong>Sepsis patients exhibited significantly decreased miR-142-5p expression, inversely correlating with inflammatory markers (IL-6, TNF-α, IL-1β). ROC analysis showed excellent diagnostic value (AUC = 0.917). Pearson correlations indicated significant clinical associations, while logistic regression identified miR-142-5p as an independent protective factor (HR = 0.498, 95% CI:0.282-0.882, P = 0.017). LPS models confirmed miR-142-5p's anti-inflammatory effects through cytokine suppression, with knockdown showing opposite effects. Mechanistically, dual-luciferase and transfection assays verified CXCL8 as a direct target mediating these effects.</p><p><strong>Conclusion: </strong>miR-142-5p may alleviate sepsis by targeting CXCL8-mediated inflammation, suggesting its potential as a diagnostic biomarker and therapeutic target.</p>","PeriodicalId":12862,"journal":{"name":"Hereditas","volume":"162 1","pages":"205"},"PeriodicalIF":2.5,"publicationDate":"2025-10-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12512853/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145258040","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Single-cell RNA sequencing reveals that Danggui Buxue Tang decoction facilitates wound healing after anal fistula by promoting M2 macrophage polarization. 单细胞RNA测序结果显示当归补血汤通过促进M2巨噬细胞极化促进肛瘘创面愈合。
IF 2.5 3区 生物学 Pub Date : 2025-10-09 DOI: 10.1186/s41065-025-00578-2
Xue Pang, Yutao Wang, Jianzhuang Guo

Background: We aim to employ single-cell RNA (scRNA) sequencing technology to investigate potential regulatory mechanism of Danggui Buxue Tang (DBT) in wound healing for its utilization in post-anal fistula surgery recovery.

Methods: Fistula-like wound model in mice was established and administered DBT to assess its effects. Mice were divided into control and DBT groups and collected samples on the first day and 7th day after model establishment. The DBT was prepared from Astragalus membranaceus and Angelica sinensis. ScRNA sequencing was performed on each group.

Results: Our results showed that DBT treatment obviously reduced wound area in mice with anal fistula through activation of OPN/PI3K/Akt/eNOS signaling. Furthermore, the results of scRNA sequencing showed that all cells were clustered into 7 types, and the macrophages were categorized into 13 distinct clusters. In the early stages of wound formation, M1-like macrophages (M1C1) abundant in both groups at day1. However, by day 7 post-injury, the DBT-treated group exhibited a reduction in the infiltration of M1-like macrophages (M1C1) compared to the model group. Conversely, the proportion of M2-like macrophages (M2C3) showed a marked increase in the DBT group at day 7, while decreasing in the model group. Pseudo-time trajectory analysis confirmed that DBT treatment modulates macrophage polarization, potentially enhancing the wound healing process by promoting a transition from pro-inflammatory to anti-inflammatory macrophage populations.

Conclusion: DBT has the potential to accelerate wound healing after anal fistula by promoting M2 macrophage polarization, likely through activation of the PI3K/Akt signaling pathway.

背景:我们旨在利用单细胞RNA (scRNA)测序技术研究当归补血汤(DBT)对创面愈合的潜在调控机制,为其在肛瘘术后恢复中的应用奠定基础。方法:建立小鼠瘘样创面模型,并给予DBT观察其作用。将小鼠分为对照组和DBT组,分别于造模后第1天和第7天采集标本。以黄芪和当归为原料制备DBT。对各组进行ScRNA测序。结果:我们的研究结果表明,DBT通过激活OPN/PI3K/Akt/eNOS信号明显减少肛瘘小鼠创面面积。此外,scRNA测序结果显示,所有细胞聚集为7种类型,巨噬细胞分为13种不同的簇。在创面形成早期,两组在第1天均有大量m1样巨噬细胞(M1C1)。然而,在损伤后第7天,与模型组相比,dbt治疗组m1样巨噬细胞(M1C1)的浸润减少。相反,在第7天,DBT组m2样巨噬细胞(M2C3)的比例明显增加,而模型组则下降。伪时间轨迹分析证实,DBT治疗调节巨噬细胞极化,可能通过促进巨噬细胞群从促炎向抗炎的转变来促进伤口愈合过程。结论:DBT可能通过激活PI3K/Akt信号通路,促进M2巨噬细胞极化,从而加速肛瘘创面愈合。
{"title":"Single-cell RNA sequencing reveals that Danggui Buxue Tang decoction facilitates wound healing after anal fistula by promoting M2 macrophage polarization.","authors":"Xue Pang, Yutao Wang, Jianzhuang Guo","doi":"10.1186/s41065-025-00578-2","DOIUrl":"10.1186/s41065-025-00578-2","url":null,"abstract":"<p><strong>Background: </strong>We aim to employ single-cell RNA (scRNA) sequencing technology to investigate potential regulatory mechanism of Danggui Buxue Tang (DBT) in wound healing for its utilization in post-anal fistula surgery recovery.</p><p><strong>Methods: </strong>Fistula-like wound model in mice was established and administered DBT to assess its effects. Mice were divided into control and DBT groups and collected samples on the first day and 7th day after model establishment. The DBT was prepared from Astragalus membranaceus and Angelica sinensis. ScRNA sequencing was performed on each group.</p><p><strong>Results: </strong>Our results showed that DBT treatment obviously reduced wound area in mice with anal fistula through activation of OPN/PI3K/Akt/eNOS signaling. Furthermore, the results of scRNA sequencing showed that all cells were clustered into 7 types, and the macrophages were categorized into 13 distinct clusters. In the early stages of wound formation, M1-like macrophages (M1C1) abundant in both groups at day1. However, by day 7 post-injury, the DBT-treated group exhibited a reduction in the infiltration of M1-like macrophages (M1C1) compared to the model group. Conversely, the proportion of M2-like macrophages (M2C3) showed a marked increase in the DBT group at day 7, while decreasing in the model group. Pseudo-time trajectory analysis confirmed that DBT treatment modulates macrophage polarization, potentially enhancing the wound healing process by promoting a transition from pro-inflammatory to anti-inflammatory macrophage populations.</p><p><strong>Conclusion: </strong>DBT has the potential to accelerate wound healing after anal fistula by promoting M2 macrophage polarization, likely through activation of the PI3K/Akt signaling pathway.</p>","PeriodicalId":12862,"journal":{"name":"Hereditas","volume":"162 1","pages":"204"},"PeriodicalIF":2.5,"publicationDate":"2025-10-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12512633/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145258171","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification of target genes of Astragalus mongholicus and Saposhnikovia divaricata extracts in human synoviocytes for potential osteoarthritis treatment. 黄芪和小檗提取物治疗骨关节炎的滑膜细胞靶基因鉴定。
IF 2.5 3区 生物学 Pub Date : 2025-10-08 DOI: 10.1186/s41065-025-00581-7
Jiarui Zhou, Xiaopei Gao, Xing Liu, Sitong Yang, Zhengren Wei, Yubao Gong
{"title":"Identification of target genes of Astragalus mongholicus and Saposhnikovia divaricata extracts in human synoviocytes for potential osteoarthritis treatment.","authors":"Jiarui Zhou, Xiaopei Gao, Xing Liu, Sitong Yang, Zhengren Wei, Yubao Gong","doi":"10.1186/s41065-025-00581-7","DOIUrl":"10.1186/s41065-025-00581-7","url":null,"abstract":"","PeriodicalId":12862,"journal":{"name":"Hereditas","volume":"162 1","pages":"203"},"PeriodicalIF":2.5,"publicationDate":"2025-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12506284/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145250872","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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