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ATOH-1 Gene Therapy in Acquired Sensorineural Hearing Loss: A Meta-Analysis and Bioinformatic Analysis of Preclinical Studies. ATOH-1基因治疗获得性感音神经性听力损失:临床前研究的荟萃分析和生物信息学分析。
IF 3.9 3区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-01 Epub Date: 2025-06-12 DOI: 10.1089/hum.2025.013
Ahmad Saeed, Osama Younis, Nada Al-Awamleh, Fares Qubbaj, Zeid Al-Sharif, Samia Sulaiman, Mohammad Al-Taher, Lubna Khreesha

Sensorineural hearing loss (SNHL) is the most common sensory deficit globally. Acquired SNHL results from ototoxic damage to cochlear hair cells (HCs) and is typically irreversible due to their limited regenerative capacity. While no cure currently exists, targeting the underlying pathology offers potential. Preclinical studies have investigated transcription factors like ATOH1, which can induce non-sensory cells to transdifferentiate into HCs. Gene therapy using viral vectors to deliver ATOH1 is emerging as a promising regenerative approach. PubMed, Web of Science, and Embase were systematically searched. The review was conducted following the Systematic Review Center for Laboratory Animal Experimentation guidelines. Random-effects meta-analysis was conducted using R's "meta" and "metafor" packages. To corroborate our findings, differential gene expression (DEG) analysis was performed on the GEO dataset GSE127683 using DESeq2. K-means clustering and gene set enrichment analysis (GSEA) were conducted using iDEP 2.0 and Enrichr, respectively. Four studies including 52 rodents were included. ATOH1 gene therapy significantly reduced Auditory Brainstem Response thresholds (MD = -21.37 dB SPL, CI: [-40.19; -2.54], p = 0.027), indicating improved hearing. DEG analysis showed upregulation of genes crucial for hair cell differentiation and functioning, including GFI1, PTPRQ, OTOF, USH2A, and POU4F3. GSEA highlighted key upregulated pathways related to inner ear development, auditory receptor cell differentiation and sensory perception of sound. ATOH1 gene therapy shows promise for treating acquired SNHL. However, further clinical trials are essential to confirm these preclinical findings and advance towards a potential cure.

感觉神经性听力损失(SNHL)是全球最常见的感觉缺陷。获得性SNHL由耳蜗毛细胞(hc)的耳毒性损伤引起,由于其再生能力有限,通常是不可逆的。虽然目前还没有治愈方法,但针对潜在病理提供了潜力。临床前研究已经研究了转录因子如ATOH1,它可以诱导非感觉细胞转分化为hcc。利用病毒载体传递ATOH1的基因治疗正在成为一种有前景的再生方法。系统检索PubMed、Web of Science和Embase。审查是按照实验动物实验系统审查中心的指导方针进行的。随机效应荟萃分析使用R的“meta”和“metafor”包进行。为了证实我们的发现,我们使用DESeq2对GEO数据集GSE127683进行了差异基因表达(DEG)分析。分别使用iDEP 2.0和enrichment进行K-means聚类和基因集富集分析(GSEA)。纳入了4项研究,包括52只啮齿动物。ATOH1基因治疗显著降低听觉脑干反应阈值(MD = -21.37 dB SPL, CI: -40.19;-2.54], p = 0.027),说明听力有所改善。DEG分析显示,对毛细胞分化和功能至关重要的基因上调,包括GFI1、PTPRQ、OTOF、USH2A和POU4F3。GSEA强调了与内耳发育、听觉受体细胞分化和声音感知相关的关键上调通路。ATOH1基因疗法有望治疗获得性SNHL。然而,进一步的临床试验是必要的,以证实这些临床前的发现和推进潜在的治愈。
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引用次数: 0
FDA Names Prasad CBER Director, Sparking Gene Therapy Review Concerns. FDA任命普拉萨德为CBER主任,引发基因治疗审查担忧。
IF 3.9 3区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-01 Epub Date: 2025-06-11 DOI: 10.1089/hum.2025.097
Alex Philippidis
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引用次数: 0
AAV8-LDLR Gene Therapy in Ldlr-KO and Homozygous Ldlr p.W483X Mice. AAV8-LDLR基因在Ldlr- ko和纯合子Ldlr p.W483X小鼠中的治疗
IF 3.9 3区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-01 Epub Date: 2025-06-04 DOI: 10.1089/hum.2024.164
Qingao Li, Muyun Tang, Ye Jin, Gengchen Su, Yufan Li, Kaide Ju, Shijie Zhang, Shuyang Zhang, Xiaodong Luan

The low-density lipoprotein receptor (LDLR) plays a crucial role in cholesterol regulation and lipoprotein transport. Variations in the LDLR gene can cause familial hypercholesterolemia (FH), with homozygous familial hypercholesterolemia (HoFH) being the most severe form. HoFH is marked by elevated low-density lipoprotein cholesterol (LDL-C) levels and early onset of cardiovascular disease, often with a poor prognosis. Current treatment options for HoFH are limited by insufficient effectiveness and restricted availability. Gene therapy, which involves the delivery of functional LDLR genes, offers a promising and innovative approach that could significantly improve outcomes for patients with HoFH. In this study, the adeno-associated virus serotype 8 (AAV8) vector was used to deliver the LDLR gene specifically to hepatocytes. The vector was designed using the pAAV-TBG plasmid, incorporating a hepatocyte-specific thyroid hormone-binding globulin (TBG) promoter. Viral packaging was performed in HEK 293T cells, followed by virus collection, purification, and titration. Mice, including C57BL/6J, Ldlr-KO, and homozygous Ldlr p.W483X mice, were injected with low, medium, or high doses of the virus via the tail vein. The efficacy and safety of the AAV8-LDLR gene therapy were assessed through Western blot analysis, lipid profiling, and liver pathology. AAV8-mediated LDLR delivery effectively improved lipid levels in both Ldlr-KO and homozygous Ldlr p.W483X mice. LDL-C levels showed a sustained reduction over the 2-month observation period. Western blot analysis confirmed the expression of LDLR protein in the liver, while lipid profiling demonstrated significant reductions in total cholesterol, triglycerides, LDL-C, and high-density lipoprotein cholesterol levels. Liver histopathology revealed no significant differences in non-alcoholic fatty liver disease scores between groups, indicating a favorable safety profile, particularly at low and medium doses. AAV8-LDLR gene therapy shows considerable promise as an effective treatment for HoFH. Our results indicate that this therapy significantly reduces lipid levels while maintaining a favorable safety profile.

低密度脂蛋白受体(LDLR)在胆固醇调节和脂蛋白转运中起着至关重要的作用。LDLR基因的变异可引起家族性高胆固醇血症(FH),纯合子家族性高胆固醇血症(HoFH)是最严重的形式。HoFH的特点是低密度脂蛋白胆固醇(LDL-C)水平升高和心血管疾病的早期发病,通常预后较差。目前HoFH的治疗方案受到有效性不足和可获得性的限制。基因治疗,包括功能性LDLR基因的传递,提供了一种有前途的创新方法,可以显著改善HoFH患者的预后。本研究采用腺相关病毒血清型8 (AAV8)载体将LDLR基因特异性递送至肝细胞。采用pAAV-TBG质粒设计载体,其中包含肝细胞特异性甲状腺激素结合球蛋白(TBG)启动子。在HEK 293T细胞中进行病毒包装,然后进行病毒收集、纯化和滴定。小鼠,包括C57BL/6J、Ldlr- ko和纯合子Ldlr p.W483X小鼠,通过尾静脉注射低、中、高剂量的病毒。通过Western blot分析、脂质分析和肝脏病理来评估AAV8-LDLR基因治疗的有效性和安全性。aav8介导的LDLR递送有效改善了LDLR - ko和纯合子LDLR p.W483X小鼠的脂质水平。LDL-C水平在2个月的观察期内持续下降。Western blot分析证实了肝脏中LDLR蛋白的表达,而脂质分析显示总胆固醇、甘油三酯、LDL-C和高密度脂蛋白胆固醇水平显著降低。肝脏组织病理学显示,两组间非酒精性脂肪性肝病评分无显著差异,表明安全性良好,特别是在低剂量和中剂量下。AAV8-LDLR基因治疗作为HoFH的有效治疗方法显示出相当大的前景。我们的研究结果表明,这种疗法在保持良好的安全性的同时显著降低了血脂水平。
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引用次数: 0
Recombinant Adeno-Associated Virus Integration Profiles in Nonhuman Primates and Gene Therapy Participants after Treatment with Valoctocogene Roxaparvovec. 用valoccogene Roxaparvovec治疗后,非人灵长类动物和基因治疗参与者的重组腺相关病毒整合谱。
IF 3.9 3区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-01 Epub Date: 2025-06-04 DOI: 10.1089/hum.2024.236
Chris B Russell, Christian Vettermann, Suresh Agarwal, Evan Witt, Wyatt Clark, Jeremy Arens, Raffaele Fronza, Kristin M Obrochta Moss, Theresa Kasprzyk, Tara M Robinson, Huyen Tran, Gili Kenet, Priyanka Raheja, Will Lester, Kevin Eggan, Stephen Zoog

Recombinant adeno-associated viruses (AAVs) are clinically relevant vectors for gene therapy that persist largely as extrachromosomal episomes but also infrequently integrate into host genomes. Valoctocogene roxaparvovec is an approved AAV-based gene therapy for severe hemophilia A. We present a molecular characterization of the vector integration profiles in 5 human biopsy samples from valoctocogene roxaparvovec clinical trials as well as in samples from valoctocogene roxaparvovec-treated nonhuman primates (NHPs). The number of genomic integrations was substantially below the previously reported number of transgene-expressing cells, and integration profiles were similar between human and NHP samples. The integration profiles were polyclonal, similarly distributed across the genome, and demonstrated a small bias toward regions of open chromatin and actively transcribed genes, with no relative enrichment in cancer-associated genes. These observations were replicated between species and support the concept that preclinical assessment of AAV vector integration in NHPs is representative of outcomes in humans.

重组腺相关病毒(aav)是临床相关的基因治疗载体,主要存在于染色体外插曲中,但也很少整合到宿主基因组中。valoccogene roxaparvovec是一种经批准的基于aav的重度a型血友病基因疗法。我们在valoccogene roxaparvovec临床试验的5个人体活检样本以及valoccogene roxaparvovec治疗的非人灵长类动物(NHPs)样本中展示了载体整合谱的分子特征。基因组整合的数量大大低于先前报道的转基因表达细胞的数量,并且人类和NHP样本之间的整合谱相似。整合谱是多克隆的,相似地分布在整个基因组中,并且显示出对开放染色质区域和活跃转录基因的小偏倚,在癌症相关基因中没有相对富集。这些观察结果在不同物种之间得到了重复,并支持以下概念,即对甲型肝炎病毒载体整合的临床前评估可以代表人类的结果。
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引用次数: 0
Limitation of Assay Sensitivity Revealed by the Improvement of Cell-Based Assay Against Various Adeno-Associated Virus Serotypes. 针对多种腺相关病毒血清型的细胞检测方法的改进揭示了检测灵敏度的局限性。
IF 3.9 3区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-05-19 DOI: 10.1089/hum.2024.261
Ryota Watano, Kenji Ohba, Yoshihide Sehara, Yuka Hayashi, Yasushi Saga, Masashi Urabe, Tsukasa Ohmori, Hiroaki Mizukami

Gene therapy using adeno-associated virus (AAV) vectors is currently expanding to broad clinical applications. As the presence of a neutralizing antibody (NAb) against AAV capsids significantly restrains their efficacy, an accurate evaluation of NAb status is crucial for selecting appropriate candidates for gene therapy. Notably, cell-based NAb assays may not be sufficiently sensitive for detecting low-titer NAb, and few assays can evaluate multiple AAV serotypes using a commonly available cell. In this study, we developed a sensitive NAb assay against various AAV serotypes using commonly available HEK293 and Huh-7 cells. We found that adding glucose efficiently enhanced transgene expression across various AAV serotypes without causing cell damage. In addition, by combining a highly sensitive reporter gene, NanoLuc, the necessary dose of AAV vector was significantly reduced. The reduction of AAV dose resulted in the increased sensitivity of NAb detection as low as 100 vector genomes/cell. At the lower vector doses, sensitivity improvement was not observed regardless of serotypes, suggesting the limit of assay sensitivity of the cell-based NAb assay. These findings provide a highly sensitive methodology for assessing NAb titers and offer insights into conditions to attain maximal sensitivity in the cell-based NAb assay.

目前,利用腺相关病毒(AAV)载体进行基因治疗正在扩大到广泛的临床应用。由于针对AAV衣壳的中和抗体(NAb)的存在会显著抑制其疗效,因此准确评估NAb状态对于选择合适的基因治疗候选人至关重要。值得注意的是,基于细胞的NAb检测可能对检测低滴度NAb不够敏感,并且很少有检测方法可以使用常见的细胞评估多种AAV血清型。在这项研究中,我们使用常用的HEK293和Huh-7细胞开发了一种针对各种AAV血清型的敏感NAb检测方法。我们发现添加葡萄糖有效地增强了各种AAV血清型的转基因表达,而不会引起细胞损伤。此外,通过结合高度敏感的报告基因NanoLuc,可以显著降低AAV载体的必要剂量。AAV剂量降低导致NAb检测灵敏度提高,低至100个载体基因组/细胞。在较低的载体剂量下,无论血清型,敏感性均未观察到改善,这表明基于细胞的NAb检测的检测灵敏度存在局限性。这些发现为评估NAb滴度提供了一种高度敏感的方法,并为在基于细胞的NAb测定中获得最大灵敏度的条件提供了见解。
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引用次数: 0
Oncolytic Adenovirus Armoring with CXCL9 and IL15 Shows Potent Antitumor Activity and Boosts CAR-T Therapy for Prostate Cancer. 用CXCL9和IL15装甲的溶瘤腺病毒显示出有效的抗肿瘤活性并促进前列腺癌的CAR-T治疗
IF 3.9 3区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-05-09 DOI: 10.1089/hum.2024.254
Lin Fang, Xueyan Wang, Yi Zhang, Chen Zhang, Xiaoxiao Liu, Wanjing Li, Yuxin Zhang, Nan Sun, Junnian Zheng, Gang Wang

Chimeric antigen receptor T cell (CAR-T) therapy has achieved great success and progress for treatment of hematological malignancy, but it still cannot overcome the obstacles in solid tumors. The hostile tumor microenvironment (TME), such as dense extracellular matrix, hypoxia, low pH, and tumor-derived metabolites, largely impedes CAR-T function. Oncolytic virus, as a form of immunotherapy, provides a way to antagonize the TME and improve the efficacy of CAR-T cells in solid tumors. In this study, the chemokine CXCL9 and interleukin 15 (IL15) genes were genetically integrated into adenoviral vector to construct oncolytic adenovirus (OAV) Ad-CXCL9-IL15, which could infect tumor cells to express and secrete CXCL9 and IL15. Ad-CXCL9-IL15 showed potent antitumor activity in xenografted prostate cancer model and augmented the tumor infiltration of CD45+CD3+ T and CD8+ T cells in immunocompetent mice. Moreover, Ad-CXCL9-IL15 treatment decreased Treg cells in tumor mass and increased CD44+CD62L+ T cells in spleen. Indicating that Ad-CXCL9-IL15 modified the TME and augmented antitumor immune responses in vivo. Furthermore, administration of Ad-CXCL9-IL15 dramatically promoted infiltration and survival of B7H3-targeting CAR-T cells, improved the therapeutic efficacy, and prolonged the survival time of prostate cancer-bearing mice. Therefore, cytokine-armored OAV Ad-CXCL9-IL15 could be used as a bioenhancer to modify TME and boost immunotherapy for solid tumors.

嵌合抗原受体T细胞(CAR-T cell, Chimeric antigen receptor T, CAR-T)疗法在血液系统恶性肿瘤的治疗上取得了巨大的成功和进展,但在实体肿瘤的治疗上仍无法克服障碍。恶性肿瘤微环境(TME),如致密的细胞外基质、缺氧、低pH值和肿瘤衍生的代谢物,在很大程度上阻碍了CAR-T的功能。溶瘤病毒作为免疫治疗的一种形式,提供了一种对抗TME和提高CAR-T细胞在实体瘤中的疗效的方法。本研究将趋化因子CXCL9和白细胞介素15 (IL15)基因遗传整合到腺病毒载体中,构建溶瘤腺病毒(OAV) Ad-CXCL9-IL15,该病毒可感染肿瘤细胞表达和分泌CXCL9和IL15。Ad-CXCL9-IL15在异种移植前列腺癌模型中显示出较强的抗肿瘤活性,增强了免疫正常小鼠的CD45+CD3+ T和CD8+ T细胞的肿瘤浸润。此外,Ad-CXCL9-IL15治疗降低了肿瘤肿块中的Treg细胞,增加了脾脏中的CD44+CD62L+ T细胞。表明Ad-CXCL9-IL15在体内修饰了TME并增强了抗肿瘤免疫反应。此外,给药Ad-CXCL9-IL15可显著促进b7h3靶向CAR-T细胞的浸润和存活,提高治疗效果,延长前列腺癌小鼠的生存时间。因此,细胞因子装甲的OAV Ad-CXCL9-IL15可以作为生物增强剂来修饰TME并促进实体肿瘤的免疫治疗。
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引用次数: 0
Marks' Resignation Sparks Concerns on FDA Regulation of Gene Therapies. Marks的辞职引发了对FDA基因疗法监管的担忧。
IF 3.9 3区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-05-07 DOI: 10.1089/hum.2025.075
Alex Philippidis
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引用次数: 0
A Single-Sector Higher Throughput Sedimentation Velocity Analytical Ultracentrifugation Method for Recombinant Adeno-Associated Virus Empty and Full Ratio Analysis. 重组腺相关病毒空、满比分析的单扇区高通量沉降速度分析超离心方法。
IF 3.9 3区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-05-16 DOI: 10.1089/hum.2024.162
Xiang Li, Qikun Yu, Hua Bi, Dening Pei, Da Zhang, Wei Jiang, Xiaodong Ye, Zhenzhen Cai, Wenxiu Hou, Akash Bhattacharya, Yichen Yang, Cong Wang, Miao Ye, Xi Qin, Dehua Huo, Chenggang Liang
<p><p>Recombinant adeno-associated virus (rAAV) has emerged as one of the most important gene delivery vectors in the field of gene therapy due to its unique advantages and characteristics. The empty and full ratio is a critical quality attribute in the quality control (QC) of rAAV, and its accurate evaluation is crucial for ensuring the safety, effectiveness, and consistency of gene therapy products. Analytical ultracentrifugation (AUC) technology, with its high resolution and accuracy, is widely recognized by the industry as the gold standard for identifying the empty and full ratio of rAAV. However, the conventional sedimentation velocity analytical ultracentrifugation (SV-AUC) method has limited throughput, failing to meet the large-scale detection needs of rAAV in process development and QC. This study aims to develop a single-sector higher throughput SV-AUC method without the need for a reference sector for blank control in order to improve the throughput of detecting the empty and full ratio of rAAV vectors. We optimized the traditional double-sector SV-AUC method, which requires a reference sector for blank control in the cell. By converting the light intensity data of AUC into pseudo-absorbance data, we significantly improve the analytical throughput. By tracking the variation of light intensity data with radius, we could clearly observe the sedimentation process of the rAAV sample. Despite a difference in the absolute value of pseudo-absorbance, the accurately fitted relative absorbance value and the traditional SV-AUC absorbance value with blank control were comparable, further verifying the applicability of this upgraded rAAV analytical method. The detailed comparison and verification between the upgraded method and the traditional SV-AUC method showed that the consistency and repeatability of the percentage and sedimentation coefficient were excellent both within the same cell and across different cells. The analysis results of samples from seven independent cells with a total of 14 sectors showed that the overall data exhibited good repeatability. The consistency of the high percentage empty capsid (HE) samples repeatability results was good, and the overlay of the C(s) distribution diagram also showed good pattern consistency. The relative standard deviation of the average percentage of empty, partial, and full capsids was maintained within 5%. The upgraded method demonstrated excellent consistency and repeatability in the analysis of rAAV samples with different empty and full ratios, aligning closely with the data obtained with the traditional SV-AUC method, the gold standard. Linear correlation analysis between the titers of HE samples and the overall absorbance (A value) of AUC, as well as the absorbance of empty, partial, and full capsids, revealed a good linear relationship, further confirming the applicability and reliability of the upgraded AUC method for evaluating rAAV samples with different titers. We also preliminarily e
重组腺相关病毒(Recombinant adeno-associated virus, rAAV)由于其独特的优势和特点,已成为基因治疗领域最重要的基因传递载体之一。空满比是rAAV质量控制(QC)中的一个关键质量属性,其准确评价对于保证基因治疗产品的安全性、有效性和一致性至关重要。分析型超离心(AUC)技术以其高分辨率和准确性被业界广泛认可为鉴定rAAV空满比的金标准。然而,传统的沉降速度分析超离心(SV-AUC)方法的通量有限,无法满足rAAV在工艺开发和质量控制方面的大规模检测需求。本研究旨在开发一种无需空白对照参考扇区的单扇区高通量SV-AUC方法,以提高rAAV载体空满比检测的吞吐量。我们对传统的双扇区SV-AUC方法进行了优化,该方法需要一个参考扇区来进行细胞内的空白控制。通过将AUC光强数据转换为伪吸光度数据,我们显著提高了分析通量。通过跟踪光强数据随半径的变化,我们可以清楚地观察到rAAV样品的沉降过程。虽然伪吸光度绝对值存在差异,但准确拟合的相对吸光度值与空白对照的传统SV-AUC吸光度值具有可比性,进一步验证了改进后的rAAV分析方法的适用性。将改进后的方法与传统的SV-AUC方法进行了详细的比较和验证,结果表明,无论在同一细胞内还是不同细胞间,该方法的百分比和沉降系数的一致性和重复性都很好。7个独立细胞共14个扇区的样品分析结果表明,总体数据具有良好的可重复性。高百分比空衣壳(HE)样品重复性结果一致性好,C(s)分布图叠加也表现出良好的模式一致性。空衣壳、部分衣壳和满衣壳平均百分比的相对标准偏差保持在5%以内。改进后的方法在不同空比和满比的rAAV样品分析中具有良好的一致性和重复性,与传统的金标准SV-AUC方法获得的数据非常吻合。HE样品的滴度与AUC的总吸光度(A值)以及空衣壳、部分衣壳和满衣壳的吸光度进行线性相关分析,显示出良好的线性关系,进一步证实了改进后的AUC方法对不同滴度rAAV样品的适用性和可靠性。我们还初步探讨了该方法的稳健性,发现即使在样本量存在轻微波动的情况下,测试结果也保持稳定,有效缓解了人们对样本量不准确对结果影响的担忧。通过滴墨模拟窗口污染或磨损,发现虽然C(s)分布的峰值形状受到影响,但比值结果与传统的SV-AUC方法一致,证明了新方法在不同测试条件下具有良好的抗干扰能力。我们对含有不同比例空衣壳、部分衣壳和完整衣壳的rAAV样品进行了可比性研究。不同空、满比例的rAAV样品,两种方法所得结果均具有较高的一致性和重复性。综上所述,本研究提出的无空白对照参考扇区的单扇区高通量SV-AUC方法不仅提高了rAAV样品的分析效率,而且保证了结果的准确性和精密度,为基因治疗提供了一种新的高通量可靠的分析工具。这项技术有望加速基因治疗产品的开发和评估过程。
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引用次数: 0
Halting Recombinant Adeno-Associated Virus Transgene Expression Using mRNA-Lipid Nanoparticle-Delivered Meganucleases. 利用mrna -脂质纳米颗粒递送的巨核酶停止重组腺相关病毒的转基因表达。
IF 3.9 3区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-05-12 DOI: 10.1089/hum.2025.011
Rubens Tavora, Lizhou Zhang, Mai H Tran, Hao Li, Dan O'Hagan, Andi Pan, Lorenzo Barrett, Joseph A Jablonski, Sonia Mediouni, Alexander Lopez, Zachary Comella, Charles Bailey, Hyeryun Choe, Michael Farzan, Susana T Valente

Recombinant adeno-associated virus (rAAV) vectors are increasingly preferred for in vivo gene therapy due to their broad tropism, low immunogenicity, and sustained transgene expression. Nevertheless, in cases of adverse reactions to these expressions, a method to suppress or permanently halt rAAV transgene activity could significantly enhance the safety of these vectors. To address this need, we employed meganucleases-highly specific DNA endonucleases with long recognition sequences. By placing meganuclease target sites within rAAV transgenes, we created a system in which targeted cleavage leads to controlled disruption of transgene expression. Utilizing a luciferase assay, we screened various meganucleases and identified I-AniI-Y2, I-BmoI, and I-PpoI as prime candidates due to their high cleavage efficiencies. By strategically placing multiple meganuclease target sequences within introns, as well as in the 5' and 3' untranslated regions (UTRs) of transgenes, we significantly enhanced the cleavage efficiency of these meganucleases, ensuring robust and targeted suppression of transgene expression. Finally, we employed an mRNA-loaded lipid nanoparticledelivery system to demonstrate the ability of meganucleases to robustly inhibit rAAV-mediated transgene expression in vitro. Our findings underscore the potential of meganucleases as a viable safety mechanism in rAAV gene therapies, marking a significant advance toward safer long-term gene therapy approaches.

重组腺相关病毒(rAAV)载体由于其广泛的亲和性、低免疫原性和持续的转基因表达,在体内基因治疗中越来越受到青睐。然而,在对这些表达有不良反应的情况下,抑制或永久停止rAAV转基因活性的方法可以显著提高这些载体的安全性。为了满足这一需求,我们采用了巨核酶-具有长识别序列的高度特异性DNA内切酶。通过在rAAV转基因中放置巨核酶目标位点,我们创建了一个系统,在该系统中,靶向切割导致转基因表达的受控中断。利用荧光素酶测定,我们筛选了各种巨核酶,并确定了I-AniI-Y2、I-BmoI和I-PpoI作为主要候选酶,因为它们的切割效率很高。通过战略性地将多个巨核酶靶序列置于内含子内,以及转基因的5‘和3’非翻译区(UTRs),我们显著提高了这些巨核酶的切割效率,确保了对转基因表达的稳健和靶向抑制。最后,我们采用了一种装载mrna的脂质纳米颗粒递送系统来证明巨核酶在体外强有力地抑制raav介导的转基因表达的能力。我们的发现强调了巨核酶在rAAV基因治疗中作为一种可行的安全机制的潜力,标志着更安全的长期基因治疗方法取得了重大进展。
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引用次数: 0
Progress, Applications and Prospects of CRISPR-Based Genome Editing Technology in Gene Therapy for Cancer and Sickle Cell Disease. 基于crispr的基因组编辑技术在癌症和镰状细胞病基因治疗中的进展、应用与展望
IF 3.9 3区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-06-01 Epub Date: 2025-05-12 DOI: 10.1089/hum.2024.262
Sha-Sha Zang, Ruirui Zhang, Jia-Run Zhang, Xi Zhang, Jun Li

The advent of genome-editing technologies, particularly the RNA-guided the clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated system (Cas) 9, which originates from prokaryotic CRISPR/Cas adaptive immune mechanisms, has revolutionized molecular biology. Renowned for its simplicity, cost-effectiveness, and capacity for multiplexed gene editing, CRISPR/Cas9 has emerged as the most versatile and widely adopted genome-editing platform. Its applications span fundamental research, biotechnology, medicine, and therapeutics. This review highlights recent advancements in CRISPR-based technologies, focusing on CRISPR/Cas9, CRISPR/Cas12a, and CRISPR/Cas12f. It emphasizes precision editing methods like base editing and prime editing, which enable targeted nucleotide changes without double-strand breaks. The specificity of these tools, including on-target accuracy and off-target risks, is critically evaluated. Additionally, recent preclinical and clinical efforts to treat diseases such as cancer and sickle cell disease using CRISPR are summarized. Finally, the challenges and future directions of CRISPR-mediated gene therapy are discussed, emphasizing its potential to integrate with other molecular approaches to address unmet medical needs.

基因组编辑技术的出现,特别是rna引导的簇状规则间隔短回文重复序列(CRISPR)/CRISPR相关系统(Cas) 9,源于原核CRISPR/Cas适应性免疫机制,已经彻底改变了分子生物学。CRISPR/Cas9以其简单,成本效益和多重基因编辑能力而闻名,已成为最通用和广泛采用的基因组编辑平台。它的应用范围包括基础研究、生物技术、医学和治疗学。本文综述了基于CRISPR技术的最新进展,重点介绍了CRISPR/Cas9、CRISPR/Cas12a和CRISPR/Cas12f。它强调精确的编辑方法,如碱基编辑和引物编辑,使目标核苷酸的变化没有双链断裂。这些工具的特异性,包括靶标准确性和脱靶风险,都经过严格评估。此外,总结了最近使用CRISPR治疗癌症和镰状细胞病等疾病的临床前和临床工作。最后,讨论了crispr介导的基因治疗的挑战和未来方向,强调了其与其他分子方法整合以解决未满足的医疗需求的潜力。
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Human gene therapy
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