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Segmentation of rat spinal cord in PET using spatiotemporal information 基于时空信息的PET大鼠脊髓分割
Pub Date : 2010-10-01 DOI: 10.1109/NSSMIC.2010.5874483
E. K. Fung, D. Weinzimmer, S. Strittmatter, Yiyun Huang, R. Carson
Segmentation in PET images is fraught with difficulty stemming from variable activity values and low SNR. Standard practice utilizes co-registered images from other modalities to provide anatomical information. Sometimes, this information may be missing or of limited usefulness. We present a method of extracting centerlines of rat spinal cords solely from dynamic PET images. The method relies on the unique temporal information in the voxel time activity curves (TAC) to improve segmentation results. Using techniques previously developed for carotid arteries, centerlines were modeled by B-splines to ensure smooth realistic curves. This method is highly automated, only requiring user definition of a small number of seed points. The method was applied to [11C]AFM studies which measure serotonin transporters in the cord. Initial analysis showed that the method yielded comparable results in standard uptake values (SUV) compared to manual delineation of regions of interest (ROI). It also demonstrated an improved outcome over segmentation based on intensity alone.
由于活动值的变化和低信噪比,PET图像的分割存在困难。标准做法利用其他模式的联合配准图像来提供解剖信息。有时,这些信息可能会丢失或用处有限。提出了一种仅从动态PET图像中提取大鼠脊髓中心线的方法。该方法依靠体素时间活动曲线(TAC)中唯一的时间信息来改善分割结果。使用先前为颈动脉开发的技术,中心线由b样条建模,以确保光滑的真实曲线。这种方法是高度自动化的,只需要用户定义少量的种子点。该方法被应用于[11C]AFM研究,该研究测量脊髓中的血清素转运体。初步分析表明,与手动划定感兴趣区域(ROI)相比,该方法在标准摄取值(SUV)方面产生了可比的结果。它也证明了仅基于强度的分割的改善结果。
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引用次数: 0
Elastic cross-sections for low energy collision of Ar+ with Ne and Monte Carlo simulation of the transport of Ar+ ions in gaseous Ar/Ne mixtures Ar+与Ne低能碰撞的弹性截面和Ar+离子在气体Ar/Ne混合物中输运的Monte Carlo模拟
Pub Date : 2010-10-01 DOI: 10.1109/NSSMIC.2010.5874019
J. Barata, C. Conde
The drift velocities and the longitudinal and transverse diffusion coefficients for Ar+ ions in gaseous Ar/Ne mixtures, at atmospheric pressures, for Ar concentrations between 1 and 20%, and reduced electric field strengths, E/N, from 1 to 100 Td, corresponding to E/p, from about 0.329 to 32.9 V cm−1 Torr−1 at 293 K, are calculated by Monte Carlo simulation. The Monte Carlo simulations use a set of integral and differential elastic collision cross-sections for Ar+ ions with neutral Ar and Ne atoms. Differential and integral elastic collision cross-sections for Ar+ ions with neutral Ne atoms are calculated, and reported for center-of-mass energies between 1 meV and 10 eV, using a modified Tang and Toennies ion-atom interaction potential model to describe ab initio spectroscopic data for the ArNe+ molecular ion and the long-range interaction potentials. The phase shifts were calculated with the JWKB approximation. The cross-sections for the collision of Ar+ ions with Ar atoms used were the ones calculated before by the authors.
用蒙特卡罗模拟计算了在大气压下,当Ar浓度在1 ~ 20%之间时,氩气/氖混合物中Ar+离子的漂移速度和纵向和横向扩散系数,以及在293 K下电场强度E/N从1到100 Td,对应于E/p从0.329到32.9 V cm−1 Torr−1。蒙特卡罗模拟使用了一组Ar+离子与中性Ar和Ne原子的积分和微分弹性碰撞截面。利用改进的Tang和Toennies离子-原子相互作用势模型描述了ArNe+分子离子的从头算光谱数据和远程相互作用势,计算了Ar+离子与中性Ne原子的微分和积分弹性碰撞截面,并报道了质心能量在1 meV和10 eV之间。用JWKB近似计算相移。所使用的Ar+离子与Ar原子碰撞的横截面是作者之前计算的。
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引用次数: 0
Mixture model for fast estimation of positron range 快速估计正电子距离的混合模型
Pub Date : 2010-10-01 DOI: 10.1109/NSSMIC.2010.5874361
P. Olcott, Eric Gonzalez, A. Vandenbroucke, C. Levin
We present a mixture model of exponential distributions to describe the variation of the positron end-point in tissue. The physics of positron trajectories through tissue was simulated by a Monte-Carlo simulator based on elastic scattering from the nucleus, inelastic collisions with atomic electrons, hard elastic collisions producing delta electrons, and the positron emission energy spectra. Data from this comprehensive physics based Monte Carlo simulation was fed into the Expectation Maximization (EM) algorithm, and adapted to a binary mixture of exponential distributions. This binary mixture distribution provides a fast and accurate way to estimate positron-range for PET Monte Carlo simulation packages. For 18F and 15O point source simulations, the root mean square (rms) deviations within 2xFWHM between this mixture model and the full Monte Carlo simulation of positron endpoint probabilities was 4 and 7%, respectively.
我们提出了一个指数分布的混合模型来描述组织中正电子终点的变化。利用蒙特卡罗仿真器模拟了正电子在组织中的运动轨迹,包括原子核的弹性散射、与原子电子的非弹性碰撞、产生δ电子的硬弹性碰撞和正电子发射能谱。该综合物理蒙特卡罗模拟的数据被输入期望最大化(EM)算法,并适应指数分布的二元混合。这种二元混合分布为PET蒙特卡罗模拟包提供了一种快速准确的正电子范围估计方法。对于18F和15O点源模拟,该混合模型与正电子端点概率的完整蒙特卡罗模拟在2xFWHM范围内的均方根(rms)偏差分别为4%和7%。
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引用次数: 1
A study of transit time variation in the PMT with a gain programmable voltage divider for a TOF PET 带增益可编程分压器的TOF PET PMT中传输时间变化的研究
Pub Date : 2010-10-01 DOI: 10.1109/NSSMIC.2010.5874162
Chao Wang, Hongdi Li, S. An, Yuxuan Zhang, H. Baghaei, R. Ramirez, Shitao Liu, W. Wong
In the front-end circuit of a Positron Emission Tomography (PET) camera, adjusting the photomultipliers (PMT) gain by changing the voltage distribution in dynodes instead of changing the total high voltage is more convenient to realize, and this method is better in signal-to-noise-ratio (SNR) than using a variable-gain-amplifier (VGA) in the signal path which may induce extra noise. In this study, we revised the previous voltage divider design to achieve wider gain adjustable range which relaxes the PMT gain-spread requirement to reduce the PMT cost. An accurate test bench was used to measure the PMT transit time variation as a function of the relative gain. From the test result, within the adjustable gain range, the PMT transit time variation can be as large as several hundreds of picoseconds; and this is non-ignorable in the Time-of-Flight (TOF) applications. Hence, a time correction is required. A look-up-table (LUT) from the transit time variation vs. PMT relative gain curve is used to correct this transit time variation with the gain adjustment simultaneously without performing the time-consuming entire system timing recalibration.
在正电子发射层析成像(PET)相机的前端电路中,通过改变节点电压分布来调节光电倍增管(PMT)的增益比改变总高压更容易实现,而且这种方法在信噪比(SNR)方面优于在信号通路中使用可变增益放大器(VGA),后者可能会产生额外的噪声。在本研究中,我们修改了先前的分压器设计,以实现更宽的增益可调范围,从而放宽了PMT增益扩展要求,以降低PMT成本。利用精密的试验台测量了PMT传输时间随相对增益的变化。从测试结果来看,在可调增益范围内,PMT传输时间变化可达几百皮秒;这在飞行时间(TOF)应用中是不可忽略的。因此,需要进行时间校正。从过境时间变化与PMT相对增益曲线的查找表(LUT)被用来校正过境时间变化与增益调整同时进行,而不执行耗时的整个系统定时重新校准。
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引用次数: 0
3D cone-beam rebinning and reconstruction for animal PET transmission tomography 动物PET透射断层扫描三维锥束重建
Pub Date : 2010-10-01 DOI: 10.1109/NSSMIC.2010.5874323
Junjun Deng, S. Siegel, Mu Chen
In PET scanners, one or multiple collimated point sources are used to acquire transmission measurements to generate attenuation maps for emission tomography [1]. The transmission acquisition is, intrinsically, 3D cone beam geometry. The acquired list-mode data are transformed into sinograms in the histogram process. Thereafter, transmission images are reconstructed from the sinograms, which are then re-projected to generate an attenuation map. Conventionally, a 2D rebinning method is used to transform the list-mode data into 2D parallel beam sinograms [2], and, accordingly, 2D reconstruction algorithms are employed to generate transmission images. Due to the inaccuracy of the 2D rebinning method, only limited oblique Lines of Response (LOR) can be used, causing limited axial coverage. If more oblique LORs were to be accepted in the rebinning process, artifacts would be introduced in the transmission images that may result in inaccurate attenuation correction factors. To address this issue, a 3D cone-beam rebinning process is proposed to faithfully transform the list-mode data, and the associated reconstruction algorithms for cone-beam geometry have been adopted to generate the transmission images. The experimental results showed the new method produced better images, especially in the axial direction.
在PET扫描仪中,使用一个或多个准直点源来获取透射测量,以生成用于发射断层扫描的衰减图[1]。传输采集本质上是三维锥束几何。在直方图处理过程中,将获取的列表模式数据转换为符号图。然后,从正弦图重建传输图像,然后重新投影以生成衰减图。传统的方法是采用二维再合方法将列表模式数据转换为二维平行光束图[2],并采用二维重建算法生成传输图像。由于二维重划方法的不准确性,只能使用有限的斜响应线(LOR),导致轴向覆盖有限。如果在重划过程中接受更斜的LORs,则会在传输图像中引入伪影,从而导致衰减校正因子不准确。为了解决这一问题,提出了一种三维锥束重建过程,以忠实地转换列表模式数据,并采用相关的锥束几何重建算法生成传输图像。实验结果表明,新方法能获得较好的图像,尤其是轴向图像。
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引用次数: 0
Integration of radiation transport models in an interactive video game to train law enforcement and first responders on preventative RAD/NUC detection (PRND) methods 在互动视频游戏中集成辐射传输模型,以培训执法人员和急救人员预防性RAD/NUC检测(PRND)方法
Pub Date : 2010-10-01 DOI: 10.1109/NSSMIC.2010.5873823
J. Winso, J. Rolando, W. H. Knight, E. S. Ackermann, V. Wijekumar, H. Yu
A novel technique has been developed under a DNDO SBIR Program to improve the quality and availability of law enforcement and first responder training in the use of Preventative Radiological/Nuclear Detection (PRND) equipment. This training method is implemented in a software system designated as RAILS (Realistic and Adaptive Interactive Learning System), which allows trainees to practice finding, identifying, and determining the threat level of radioactive sources in a 3D video game environment.
在DNDO SBIR计划下,一项新技术已经开发出来,以提高使用预防性放射性/核探测(PRND)设备的执法和急救人员培训的质量和可用性。这种培训方法是在一个名为RAILS(现实与自适应互动学习系统)的软件系统中实施的,该系统允许学员在3D视频游戏环境中练习寻找、识别和确定放射源的威胁级别。
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引用次数: 1
Maintaining low radiation damage of lead tungstate scintillation crystals operating in high dose rate radiation environment 在高剂量率辐射环境下维持钨酸铅闪烁晶体的低辐射损伤
Pub Date : 2010-10-01 DOI: 10.1109/NSSMIC.2010.5873917
A. Borisevitch, V. Dormenev, A. Fedorov, M. Korjik, T. Kuske, V. Mechinsky, O. Missevitch, R. Novotny, R. Rusack, A. Singovski
Scintillation crystals of the lead tungstate family — PWO, PWO-II — became widely used in electromagnetic calorimeters in high energy physics experiments at high luminosity accelerator facilities. During the operation of electromagnetic calorimeters a damage of the optical transmission of the crystals occurs due to creation of color centers. In addition to the recharge of a priori in the crystals existing defects by γ-radiation additional damage of the crystal matrix occurs due to hadrons. Therefore, radiation induced optical absorption can limit the energy resolution of the calorimeter. We have minimized radiation damage effects by technological efforts to obtain perfect crystals with a minimal concentration of the defects creating metastable color centers as well as the recoven' of color centers by stimulation with infrared light. In this paper we discuss the method of stimulated recovery of radiation induced absorption which can be even applied in situ. The mechanisms of the damage under γ- and hadronirradiation are described.
钨酸铅族的闪烁晶体PWO, PWO- ii -在高能物理实验中被广泛应用于电磁量热计中。在电磁量热计工作期间,由于色心的产生,晶体的光学传输受到损害。在γ辐射作用下,除了对存在缺陷的晶体进行先验充值外,还会发生强子对晶体基体的破坏。因此,辐射诱导的光吸收会限制量热计的能量分辨率。我们通过技术上的努力,以最小的缺陷浓度获得完美的晶体,创造亚稳态色中心,并通过红外光刺激恢复色中心,从而最大限度地减少了辐射损伤的影响。本文讨论了辐射诱导吸收的受激恢复方法,这种方法甚至可以在现场应用。描述了γ和强子辐照损伤的机理。
{"title":"Maintaining low radiation damage of lead tungstate scintillation crystals operating in high dose rate radiation environment","authors":"A. Borisevitch, V. Dormenev, A. Fedorov, M. Korjik, T. Kuske, V. Mechinsky, O. Missevitch, R. Novotny, R. Rusack, A. Singovski","doi":"10.1109/NSSMIC.2010.5873917","DOIUrl":"https://doi.org/10.1109/NSSMIC.2010.5873917","url":null,"abstract":"Scintillation crystals of the lead tungstate family — PWO, PWO-II — became widely used in electromagnetic calorimeters in high energy physics experiments at high luminosity accelerator facilities. During the operation of electromagnetic calorimeters a damage of the optical transmission of the crystals occurs due to creation of color centers. In addition to the recharge of a priori in the crystals existing defects by γ-radiation additional damage of the crystal matrix occurs due to hadrons. Therefore, radiation induced optical absorption can limit the energy resolution of the calorimeter. We have minimized radiation damage effects by technological efforts to obtain perfect crystals with a minimal concentration of the defects creating metastable color centers as well as the recoven' of color centers by stimulation with infrared light. In this paper we discuss the method of stimulated recovery of radiation induced absorption which can be even applied in situ. The mechanisms of the damage under γ- and hadronirradiation are described.","PeriodicalId":13048,"journal":{"name":"IEEE Nuclear Science Symposuim & Medical Imaging Conference","volume":"os-55 1","pages":"1010-1013"},"PeriodicalIF":0.0,"publicationDate":"2010-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"87095793","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
Development of pulsed X-ray tube equipped streak camera system to study scintillation phenomenon 用于研究闪烁现象的脉冲x射线管条纹相机系统的研制
Pub Date : 2010-10-01 DOI: 10.1109/NSSMIC.2010.5873742
T. Yanagida, Y. Fujimoto, Y. Furuya, Y. Yokota, N. Kawaguchi, K. Kamada, J. Pejchal, Varely Chani, K. Fukuda, D. Totsuka, K. Uchiyama, Kuniyoshi Mori, Ken Kitano, M. Nikl, A. Yoshikawa
These instructions provide guidelines for preparing manuscripts for submission to the Conference Record (CR) of the 2010 IEEE Nuclear Science Symposium and Medical Imaging Conference. If you are using Microsoft Word 6.0 or later to prepare your manuscript, you should use this document as a template. Define all symbols used in the abstract. Do not cite references in the abstract.
这些说明提供了准备提交给2010年IEEE核科学研讨会和医学成像会议会议记录(CR)的手稿的指导方针。如果您使用Microsoft Word 6.0或更高版本来准备稿件,则应使用此文档作为模板。定义抽象中使用的所有符号。不要在摘要中引用参考文献。
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引用次数: 0
Fingertip beta imager based on the SiPM technology 基于SiPM技术的指尖beta成像仪
Pub Date : 2010-10-01 DOI: 10.1109/NSSMIC.2010.5874257
A. Stolin, S. Majewski, R. Raylman, H. W. Hazard
We have implemented the low-profile SENSL 16ch SPMArray2 module in a small prototype of a beta/positron imager. The SiPM sensor has a 0.5–1mm thick plastic scintillator optically coupled via thin (1–2mm) glass window for better light spread between the sixteen 3mm SiPM pads to allow center of gravity position calculations of the scintillation light flashes. In the initial studies, aluminized Mylar foil and Teflon tape were used for a top surface reflector, and black Tedlar foil for a light-tight mechanical barrier. Sensitivity of 3–5 counts/sec per nanoCi was measured with one layer of 50 micron Teflon and 50 micron Tedlar each. For two Tedlar layers the sensitivity was lower by about 10 percent with the applied broad energy window. Intrinsic spatial resolution was estimated at approximately 2.5mm, with the un-collimated positron beam distribution limiting the measurement. The position information can be used as a finer indication when the hot spots are located within the ∼10mm×10mm useful FOV of the device. According to the initial plans, the imager will be evaluated as a tool assisting with checking the cancer margin adequacy in breast cancer excision (lumpectomy). Before surgery, the patient will obtain systemic injection of positron biomarker, such as F18-FDG, the same that was used to detect the cancer in the PET procedure. Attached to the surgeons fingertip, the imager will be used to scan the surface of the post-extraction cavity for residual positron activity as an indication of non-sufficient cancer margins, to allow for immediate in-situ correction. The imager is planned as another instrument in the set of complementary imaging and non-imaging tools to assist with breast cancer surgeries, not to replace other tools.
我们已经在beta/正电子成像仪的小型原型中实现了低姿态的SENSL 16ch SPMArray2模块。SiPM传感器有一个0.5-1mm厚的塑料闪烁体,通过薄(1-2mm)玻璃窗进行光学耦合,以便在16个3mm SiPM衬垫之间更好地传播光线,从而允许闪烁光闪烁的重心位置计算。在最初的研究中,镀铝的麦拉箔和特氟龙胶带被用于顶部表面反射器,黑色的泰德拉箔被用于不透光的机械屏障。灵敏度为每纳米oci 3-5次/秒,每纳米oci一层50微米特氟隆和50微米泰德拉。对于两层Tedlar,在应用宽能量窗的情况下,灵敏度降低了约10%。固有空间分辨率估计约为2.5mm,未准直的正电子束分布限制了测量。当热点位于设备的有用视场(~ 10mm×10mm)内时,位置信息可以用作更精细的指示。根据最初的计划,成像仪将被评估为一种工具,帮助检查乳腺癌切除(乳房肿瘤切除术)的癌缘是否足够。手术前,患者将全身注射正电子生物标志物,如F18-FDG,与PET过程中用于检测癌症的相同。将成像仪安装在外科医生的指尖上,用于扫描提取后腔的表面,以残余正电子活动作为肿瘤边缘不充分的指示,以便立即进行原位校正。成像仪计划作为辅助成像和非成像工具组中的另一种工具,以辅助乳腺癌手术,而不是取代其他工具。
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引用次数: 2
Imaging performance of two multiple-pinhole small-animal SPECT systems: Multiplexed vs. non-multiplexed data acquisition 两种多针孔小动物SPECT系统的成像性能:多路与非多路数据采集
Pub Date : 2010-10-01 DOI: 10.1109/NSSMIC.2010.5874400
Mi-Ae Park, E. Lunsford, R. Zimmerman, S. Southekal, J. Frangioni, S. Moore
Increasing the number of pinholes in small-animal SPECT significantly improves its count sensitivity. When the detector(s) are small, however, overlapping of projections (multiplexing) from different pinholes is unavoidable and can amplify noise in reconstructed images. We have evaluated the performance of two multi-pinhole systems, one with and one without multiplexing, for a prototypical tumor-imaging task. We prepared seven beads (∼1.8-mm diameter) to mimic tumors labeled with Tc-99m. A uniform gelatin phantom was used to simulate normal background tissue. The tumor-to-normal tissue ratio was ∼6:1, and each bead contained ∼1 μCi. The first scanner, equipped with two 0.8-mm pinholes on each of three heads (HMS-0.8), acquired only non-overlapping projections. We also scanned the phantom using 1.6mm pinholes (HMS-1.6) The second scanner had 9 pinholes on each of four heads, and allowed multiplexing. To compensate for decay, the phantom was scanned for 50 min on HMS-0.8, 58 min on HMS-1.6, 82 min on NanoSPECT/CT with 1.4 mm pinholes (Nano-1.4), and 102 min with 1.0 mm pinholes (Nano-1.0). A total of 30 (24) angular projections were acquired with HMS (Nano); these were reconstructed using 10 OSEM subsets for HMS, and 4 subsets for Nano. The mean voxel value in each sphere, and the mean and standard deviation in a large VOI in the background, were used to compute the signal-to-noise ratio (SNR) and contrast of each bead. The relative noise in the background was also calculated. The systems with and without multiplexing yielded similar image quality and average bead SNR, especially for HMS-0.8 and Nano-1.0. Both systems yielded very similar SNR values, despite the fact that the multiplexed system acquired data using 36 pinholes, while the non-multiplexed system had only 6 pinholes. The multiplexed acquisition did not seem to adversely affect the image contrast of the spherical tumors.
增加小动物SPECT针孔数可显著提高其计数灵敏度。然而,当检测器很小时,来自不同针孔的投影重叠(多路复用)是不可避免的,并且会放大重构图像中的噪声。我们已经评估了两个多针孔系统的性能,一个有多路复用,一个没有多路复用,用于一个典型的肿瘤成像任务。我们制备了7个直径1.8 mm的微球来模拟Tc-99m标记的肿瘤。一个均匀的明胶幻影被用来模拟正常背景组织。肿瘤与正常组织的比例为~ 6:1,每粒含~ 1 μCi。第一个扫描仪,在三个头上各配备了两个0.8毫米的针孔(HMS-0.8),只能获得非重叠的投影。我们还使用1.6mm针孔(HMS-1.6)扫描幻影。第二个扫描仪在四个头部上各有9个针孔,并允许多路复用。为了补偿衰减,在HMS-0.8上扫描幻影50分钟,在HMS-1.6上扫描58分钟,在NanoSPECT/CT上扫描1.4 mm针孔(Nano-1.4) 82分钟,在1.0 mm针孔(Nano-1.0)上扫描102分钟。HMS (Nano)共获得30(24)个角度投影;使用10个OSEM子集对HMS进行重建,4个子集对Nano进行重建。每个球体的平均体素值以及背景中较大VOI的平均值和标准差用于计算每个头部的信噪比(SNR)和对比度。计算了背景中的相对噪声。采用和不采用多路复用的系统产生了相似的图像质量和平均头信噪比,特别是在HMS-0.8和Nano-1.0下。尽管多路复用系统使用36个针孔获取数据,而非多路复用系统只有6个针孔,但两种系统的信噪比值非常相似。多路采集似乎对球形肿瘤的图像对比度没有不利影响。
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引用次数: 0
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IEEE Nuclear Science Symposuim & Medical Imaging Conference
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