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Myeloid cells mediate interferon-driven resistance to immunotherapy in advanced renal cell carcinoma 骨髓细胞介导晚期肾细胞癌中干扰素驱动的免疫治疗抵抗
IF 32.4 1区 医学 Q1 IMMUNOLOGY Pub Date : 2025-10-31 DOI: 10.1016/j.immuni.2025.10.013
Kevin Bi, Soki Kashima, Sabrina Y. Camp, Kevin Meli, Eddy Saad, Breanna M. Titchen, Chris Labaki, Ziad Bakouny, Erica M. Pimenta, Jihye Park, Erin Shannon, Jingxin Fu, Sherin Xirenayi, Jack Horst, Lotus Lum, Jeffrey J. Ishizuka, Toni K. Choueiri, David A. Braun, Eliezer M. Van Allen
Sustained type-I and type-II interferon (IFN) signaling can drive multiple mechanisms of resistance to immune checkpoint blockade (ICB). Here, we used single-cell RNA sequencing data to characterize the effects of IFNs in the tumor-immune microenvironment (TME) of renal cell carcinoma (RCC) and then examined how IFN-driven cellular phenotypes modulate ICB efficacy. Using mixed-effects models, we inferred the IFN inducibility of putative IFN-stimulated genes (ISGs) within cell types. Genes encoding inhibitory ligands and immune checkpoints were strongly expressed and IFN inducible in macrophages but less so in RCC tumor cells. In orthogonal clinical trial cohorts, a signature of myeloid IFNγ signaling, but not tumor IFNγ signaling, predicted primary resistance to first-line ICB plus anti-VEGF therapy. Functionally, IFNγ-conditioned macrophages inhibited T cell killing of RCC tumor cells in vitro. Our inferential modeling approach offers a framework for biomarker discovery through deconvolution of cytokine signaling effects in the TME and points to myeloid cells as mediators of tumor-extrinsic, IFN-driven resistance to immunotherapy in RCC.
持续的i型和ii型干扰素(IFN)信号传导可以驱动多种机制抵抗免疫检查点封锁(ICB)。在这里,我们使用单细胞RNA测序数据来表征ifn在肾细胞癌(RCC)肿瘤免疫微环境(TME)中的作用,然后研究ifn驱动的细胞表型如何调节ICB疗效。使用混合效应模型,我们推断了细胞类型中假定的IFN刺激基因(ISGs)的IFN诱导性。编码抑制配体和免疫检查点的基因在巨噬细胞中强烈表达,IFN可诱导,但在RCC肿瘤细胞中表达较少。在正交临床试验队列中,髓系IFNγ信号的特征,而不是肿瘤IFNγ信号的特征,预测了一线ICB加抗vegf治疗的原发性耐药。功能上,ifn γ-条件巨噬细胞体外抑制T细胞杀伤RCC肿瘤细胞。我们的推理建模方法为通过TME中细胞因子信号效应的反卷积发现生物标志物提供了一个框架,并指出骨髓细胞是RCC中肿瘤外源性、ifn驱动的免疫治疗耐药的介质。
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引用次数: 0
The transcription factor NFIL3 drives innate lymphoid cell specification from lymphoid progenitors 转录因子NFIL3驱动先天淋巴样细胞从淋巴样祖细胞分化
IF 32.4 1区 医学 Q1 IMMUNOLOGY Pub Date : 2025-10-30 DOI: 10.1016/j.immuni.2025.10.005
Joseph Léger, Eva Artano, Delphine Coulais, Naomie Belletoise, Raoudha Fadhloun, Devin Kenney, Avinash Bhandoola, Christelle Harly
Understanding the mechanisms that initiate innate lymphoid cell (ILC) specification may reveal how ILC functions in immunity and tissue homeostasis are programmed. Using an Il7r-lineage tracing mouse strain, we identified developmental intermediates between lymphoid progenitors and Tcf7+ ILC progenitors in the mouse bone marrow (BM). Transcriptional analysis of these intermediates identified very early expression of the transcription factor nuclear factor, interleukin 3 regulated (NFIL3). Nfil3−/− mice lacked all BM ILC-specified precursors. Forced expression of NFIL3 in lymphoid progenitors induced Tcf7+ ILC-lineage cells capable of generating all ILC subsets and conventional natural killer cells. Transient activity of NFIL3 in lymphoid precursors recapitulated BM ILC development in vitro, leading to the generation of all adult ILCs. Mechanistically, NFIL3 initiated ILC specification by inducing expression of key transcriptional regulators of ILC development—Tox, Id2, Gata3, Tcf7, and Zbtb16. Our findings indicate an apex role for NFIL3 in ILC specification and provide an in vitro approach to generate ILC-lineage cells with potential therapeutic utility.
了解先天淋巴样细胞(ILC)特异性的启动机制可以揭示ILC在免疫和组织稳态中的功能是如何被编程的。使用il7r谱系追踪小鼠品系,我们在小鼠骨髓(BM)中鉴定了淋巴样祖细胞和Tcf7+ ILC祖细胞之间的发育中间体。这些中间产物的转录分析确定了转录因子核因子,白细胞介素3调节(NFIL3)的早期表达。Nfil3−/−小鼠缺乏所有BM ilc指定的前体。NFIL3在淋巴样祖细胞中的强制表达诱导Tcf7+ ILC谱系细胞能够产生所有ILC亚群和传统的自然杀伤细胞。淋巴样前体中NFIL3的短暂活性重现了BM ILC的体外发育,导致所有成年ILC的产生。从机制上讲,NFIL3通过诱导ILC发育的关键转录调控因子——tox、Id2、Gata3、Tcf7和Zbtb16的表达,启动ILC规范。我们的研究结果表明,NFIL3在ILC规范中发挥着重要作用,并为产生具有潜在治疗效用的ILC谱系细胞提供了一种体外方法。
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引用次数: 0
Single-cell spatial transcriptomic profiling defines a pathogenic inflammatory niche in chronic active multiple sclerosis lesions 单细胞空间转录组分析定义了慢性活动性多发性硬化症病变的病原性炎症生态位
IF 32.4 1区 医学 Q1 IMMUNOLOGY Pub Date : 2025-10-29 DOI: 10.1016/j.immuni.2025.10.003
Ruoqing Feng, Lena Spieth, Lu Liu, Stefan Berghoff, Jonas Franz, Qian Liu, Zhen Wang, Vini Tiwari, Simona Vitale, Simon Frerich, Sergi Florensa, Niklas Junker, Ludwig Huber, Marco Keller, Christoph Müller, Franz Bracher, Xiaoke Ge, Patrick C.N. Rensen, Gijs Kooij, Leon Hosang, Serhii Chornyi, Martin Dichgans, Ozgun Gokce, Gesine Saher, Christine Stadelmann, Martin Giera, Janos Groh, Mikael Simons
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引用次数: 0
Cutting the Gordian knot: Untangling gasdermin C from pyroptosis 切断戈甸结:从焦亡中解开缠结的气皮素C
IF 32.4 1区 医学 Q1 IMMUNOLOGY Pub Date : 2025-10-14 DOI: 10.1016/j.immuni.2025.09.015
Zhaoyu Lin, Hai-Bin Ruan
Membrane targeting and pore formation of gasdermin C are facilitated by its proteolytic cleavage. In this issue of Immunity, Pandey et al. show how cathepsin S cleaves intestinal epithelial gasdermin C to amplify type 2 immune responses.
气真皮蛋白C的蛋白水解作用促进了其膜靶向和孔的形成。在这一期的《免疫》杂志中,Pandey等人展示了组织蛋白酶S如何切割肠上皮气真皮蛋白C以放大2型免疫反应。
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引用次数: 0
Resident memory T cells call the shots in tissue immunity 常驻记忆T细胞在组织免疫中发号施令
IF 32.4 1区 医学 Q1 IMMUNOLOGY Pub Date : 2025-10-14 DOI: 10.1016/j.immuni.2025.09.017
Sigrun Stulz, Georg Gasteiger
Vaccines that induce immunity in tissues are urgently needed. In this issue of Immunity, Joag et al. demonstrate that systemic vaccination of primates induces tissue-resident CD8+ T cells in numerous organs that can activate antiviral responses by stromal, parenchymal, and immune cells.
迫切需要在组织中诱导免疫的疫苗。在本期《免疫》杂志中,Joag等人证明,灵长类动物的全身疫苗接种可诱导许多器官中的组织驻留CD8+ T细胞,这些细胞可激活基质细胞、实质细胞和免疫细胞的抗病毒反应。
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引用次数: 0
Alzheimer’s alphabet soup: Find the letters “Z-DNA-ZBP1-RIPK1” 阿尔茨海默氏症字母汤:找到字母“Z-DNA-ZBP1-RIPK1”
IF 32.4 1区 医学 Q1 IMMUNOLOGY Pub Date : 2025-10-14 DOI: 10.1016/j.immuni.2025.09.010
Jake A. Gertie, Hachung Chung
Neuroinflammation contributes to Alzheimer’s disease (AD), but the molecules and pathways that initiate inflammation are unclear. In this issue of Immunity, Song et al. demonstrate that ZBP1-RIPK1 signaling in microglia can drive AD, wherein ZBP1 is activated by left-handed Z-DNA leaking from mitochondria, presenting new molecular targets for AD therapeutics.
神经炎症会导致阿尔茨海默病(AD),但引发炎症的分子和途径尚不清楚。在这一期的《免疫》杂志中,Song等人证明了小胶质细胞中的ZBP1- ripk1信号可以驱动AD,其中ZBP1被线粒体的左旋Z-DNA激活,为AD治疗提供了新的分子靶点。
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引用次数: 0
Nurture over nature in fate decisions of antigen-specific CD8+ T cell clones from an endogenous repertoire 后天培养在内源性抗原特异性CD8+ T细胞克隆的命运决定中的作用
IF 32.4 1区 医学 Q1 IMMUNOLOGY Pub Date : 2025-10-14 DOI: 10.1016/j.immuni.2025.09.005
Adrian Straub, Zahra Abedi, Dirk H. Busch, Veit R. Buchholz

Section snippets

Main text

Abdullah et al.1 recently set out to gauge the influence of T cell receptor (TCR)-intrinsic vs. -extrinsic factors on memory vs. effector fate decisions of CD8+ T cells. They concluded that “a majority of TCR clonotypes were highly biased toward memory or effector fate,” and that “TCR intrinsic biases […] were dominant over environmental cues.” We argue that these conclusions cannot be drawn based on the authors’ limited clonotypic data and are strongly opposed by our own observation of highly

Acknowledgments

The ultra-deep H2-Kb/SIINFEKL-specific TCR library was created as part of the MATCHMAKERS team, supported by the Cancer Grand Challenges partnership financed by CRUK (CGCATF-2023/100002) and the National Cancer Institute (1OT2CA297204-01). A.S., Z.A., and D.H.B. are members of the MATCHMAKERS team. The work was further funded by SFB-TRR 338/1 2021- 452881907 (project A01 [D.H.B.] and project B02 [V.R.B.]) and the European Research Council (starting grant 949719 SCIMAP to V.R.B.).

Declaration of interests

The authors declare no competing interests.
摘要:tabdullah等人最近开始测量T细胞受体(TCR)的内在因素和外在因素对CD8+ T细胞记忆和效应命运决定的影响。他们得出结论:“大多数TCR克隆型都高度偏向于记忆或效应命运,”而且“TCR内在的偏见[…]比环境因素更重要。”我们认为这些结论不能基于作者有限的克隆型数据得出,并且我们自己的高度观察强烈反对。确认超深H2-Kb/ siinfekl特异性TCR库是MATCHMAKERS团队的一部分,由CRUK (CGCATF-2023/100002)和国家癌症研究所(102ca297204 -01)资助的癌症大挑战合作伙伴关系提供支持。a。s。z。a。和d。h。b。是媒人小组的成员。这项工作进一步由SFB-TRR 338/1 2021- 452881907(项目A01 [D.H.B.]和B02项目[V.R.B.]])和欧洲研究委员会(开始拨款949719 SCIMAP给vrb)。利益声明作者声明无利益冲突。
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引用次数: 0
Primate resident memory T cells activate humoral and stromal immunity 灵长类动物常驻记忆T细胞激活体液和基质免疫
IF 32.4 1区 医学 Q1 IMMUNOLOGY Pub Date : 2025-10-14 DOI: 10.1016/j.immuni.2025.09.009
Vineet Joag, Benjamin N. Bimber, Clare F. Quarnstrom, Venkata S. Bollimpelli, Jason M. Schenkel, Kathryn A. Fraser, Mario Bertogliat, Andrew G. Soerens, J. Michael Stolley, Stephen D. O’Flanagan, Pamela C. Rosato, Noah V. Gavil, Marco Künzli, Jason S. Mitchell, Traci Legere, Sherrie Jean, Amit A. Upadhyay, C. Yong Kang, James Gibbs, Jonathan W. Yewdell, David Masopust
CD8+ resident memory T (Trm) cells comprise a small population of frontline sentinels compared with the large tissues they surveil, making outsized contributions to immune protection from infection. Here, we interrogated mechanisms of Trm cell function in primates. Intravenous immunization of macaques with a simian immunodeficiency virus (SIV)-gag-containing heterologous prime-boost-boost vaccine established memory T cells in >30 tissues, including visceral and mucosal compartments. Upon in vivo reactivation in the reproductive tract, antigen-sensing CD8+ Trm activated local stromal, parenchymal, and innate and adaptive immune cells. Stromal and parenchymal cells accentuated leukocyte migration and antiviral defenses. B and plasma cells mobilized into the vaginal mucosa, and bloodborne CD4+ T cells were recruited and adopted a host-defense program. Our findings demonstrate that systemic vaccination promotes a Trm cell response in barrier compartments and that Trm cells repurpose abundant neighboring stromal, parenchymal, and immune cells to amplify alarm signals and activate diverse host defenses.
与它们监测的大型组织相比,CD8+常驻记忆T (Trm)细胞构成了一小群前线哨兵,对免疫保护免受感染做出了巨大贡献。在这里,我们探讨了灵长类动物Trm细胞功能的机制。猕猴静脉注射含有猴免疫缺陷病毒(SIV) gag的异源疫苗,在30个组织(包括内脏和粘膜隔室)中建立了记忆T细胞。在生殖道体内再激活后,抗原敏感CD8+ Trm激活了局部间质、实质、先天和适应性免疫细胞。基质细胞和实质细胞增强白细胞迁移和抗病毒防御。B细胞和浆细胞被动员到阴道粘膜,血源性CD4+ T细胞被招募并采取宿主防御程序。我们的研究结果表明,全身接种疫苗可促进屏障区室中的Trm细胞反应,并且Trm细胞重新利用大量邻近的基质细胞、实质细胞和免疫细胞来放大警报信号并激活多种宿主防御。
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引用次数: 0
Reply to nurture over nature in fate decisions of antigen-specific CD8+ T cell clones from an endogenous repertoire 在内源性抗原特异性CD8+ T细胞克隆的命运决定中,对培养的应答高于自然
IF 32.4 1区 医学 Q1 IMMUNOLOGY Pub Date : 2025-10-14 DOI: 10.1016/j.immuni.2025.09.006
Leena Abdullah, Joshua J. Obar, Yina H. Huang

Section snippets

Main text

Upon activation, individual CD8+ clones decide between effector and memory T cell fates by integrating intrinsic T cell receptor (TCR) signals or “nature” and extrinsic signals from co-stimulatory ligands and inflammatory cytokines or “nurture”. The collective antigen-specific CD8+ T cell response is composed of differential fate decisions made by ∼100–1,000 individual clones. Several models describe how variations in nature drive effector vs. memory T cell differentiation, including the

Acknowledgments

This work was supported in part by the National Institutes of Health (NIH) grant R01-AI131975 to Y.H.H.; Tom and Susan Stepp to Y.H.H.; Prouty Developmental grant to Y.H.H.; NIH grants P20-GM130454, S10-OD025235, and S10-OD030242, which support the single-cell genomics core; and NIH grant P30-CA023108, which supports the Dartmouth Cancer Center’s flow cytometry (RRID: SCR_019165) and genomics (RRID: SCR_021293) shared resources.

Author contributions

L.A. and Y.H.H. wrote the original manuscript. J.J.O. provided feedback on the final manuscript.

Declaration of interests

The authors declare no competing interests.
激活后,单个CD8+克隆通过整合内在T细胞受体(TCR)信号或“自然”和来自共刺激配体和炎症细胞因子或“培养”的外在信号来决定效应T细胞和记忆T细胞的命运。集体抗原特异性CD8+ T细胞反应由约100-1,000个个体克隆做出的不同命运决定组成。几个模型描述了自然变化如何驱动效应T细胞与记忆T细胞分化,包括致谢。这项工作部分由美国国立卫生研究院(NIH)资助R01-AI131975给Y.H.H.;汤姆和苏珊Stepp到Y.H.H.;向Y.H.H.提供优质发展补助金;NIH资助P20-GM130454, S10-OD025235和S10-OD030242,支持单细胞基因组学核心;和NIH拨款P30-CA023108,支持达特茅斯癌症中心的流式细胞术(RRID: SCR_019165)和基因组学(RRID: SCR_021293)共享资源。作者contributionsL.A。而yh.h.写了原稿。j。j。o。对定稿提供了反馈。利益声明作者声明无利益冲突。
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引用次数: 0
Burning the candle at both ends: ROS-mediated telomere damage drives T cell dysfunction 点燃蜡烛两端:ros介导的端粒损伤驱动T细胞功能障碍
IF 32.4 1区 医学 Q1 IMMUNOLOGY Pub Date : 2025-10-14 DOI: 10.1016/j.immuni.2025.09.016
Alexander J. Wesolowski, Rahul Roychoudhuri
T cells need reactive oxygen species (ROS) for activation and memory formation, yet excessive ROS can drive dysfunction. Rivadeneira et al. show that chronic T cell activation in tumors exposes telomeres to damaging mitochondrial ROS, contributing to T cell dysfunction.
T细胞需要活性氧(ROS)来激活和形成记忆,然而过多的ROS会导致功能障碍。Rivadeneira等人的研究表明,肿瘤中的慢性T细胞激活使端粒暴露于线粒体ROS的破坏中,从而导致T细胞功能障碍。
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引用次数: 0
期刊
Immunity
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