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Real-World Assessment of Economic and Clinical Outcomes in Thai Patients With Respiratory Syncytial Virus Infection Across Age Groups: A Retrospective Cohort Analysis 泰国不同年龄段呼吸道合胞病毒感染患者经济和临床疗效的真实世界评估:回顾性队列分析
IF 4.3 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-11-04 DOI: 10.1111/irv.70039
Win Khaing, Chia Jie Tan, Chanthawat Patikorn, Chonnamet Techasaensiri, Oraluck Pattanaprateep, Teerapon Dhippayom, Jackrapong Bruminhent, Nathorn Chaiyakunapruk

Background

Respiratory syncytial virus (RSV) is an important cause of acute lower respiratory infections worldwide, including Thailand. This study aimed to assess clinical and economic burdens of RSV infections across different age groups in Thailand.

Method

A retrospective cohort study was conducted using data from a tertiary care hospital from 2014 to 2021. Patients who tested at least one positive RSV were included and stratified into five age groups (< 2, 2–5, 5–18, 18–65, and > 65 years). Healthcare resource utilization, direct medical costs, and clinical outcomes were analyzed with descriptive statistics. Generalized linear models with gamma distributions and log link were used to model cost outcomes. Costs were reported in 2021 US dollars (USD), with 1 USD = 31.98 Thai Baht.

Results

A total of 2122 RSV-positive patients were identified, half of which (1097) were hospitalized. The median (interquartile range [IQR]) total hospitalization costs ranged from USD780 (IQR: USD488–USD1185) in those < 2 years to USD2231 (IQR: USD1250–USD4989) in those aged 65+ years. Case fatality rates among hospitalized patients also varied from 2.5% to 28.4% depending on age. Increased age, presence of comorbidities, and need for critical care were associated with higher hospitalization costs.

Conclusion

Among RSV-positive patients, younger children experienced the greatest burden, but poorer outcomes were observed in older adults. Higher costs were associated with older age, comorbidities and critical care needs. Understanding RSV economic burdens is crucial for assessing the cost-effectiveness and public health value of vaccination programs that prioritize at-risk groups to mitigate the public health impact.

背景:呼吸道合胞病毒(RSV)是包括泰国在内的全球急性下呼吸道感染的重要病因。本研究旨在评估泰国不同年龄段人群感染 RSV 的临床和经济负担:一项回顾性队列研究使用了一家三级医院 2014 年至 2021 年的数据。研究纳入了至少一次 RSV 检测呈阳性的患者,并将其分为五个年龄组(65 岁)。通过描述性统计对医疗资源利用率、直接医疗成本和临床结果进行了分析。采用伽马分布和对数链接的广义线性模型对成本结果进行建模。成本以 2021 美元(USD)为单位,1 美元 = 31.98 泰铢:共发现 2122 名 RSV 阳性患者,其中一半(1097 人)住院治疗。住院总费用的中位数(四分位数间距 [IQR])为 780 美元(IQR:488-1185 美元):在 RSV 阳性患者中,年龄较小的儿童承受的负担最重,但老年人的治疗效果较差。较高的成本与年龄、合并症和重症护理需求有关。了解 RSV 的经济负担对于评估疫苗接种计划的成本效益和公共卫生价值至关重要,疫苗接种计划应优先考虑高危人群,以减轻对公共卫生的影响。
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引用次数: 0
Severe Neurological Complications With Influenza in Vietnamese Children 越南儿童患流感后出现严重神经系统并发症。
IF 4.3 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-11-04 DOI: 10.1111/irv.70035
Sy Duc Nguyen, Thi Huyen Trang Ngo, Thi Viet Ha Nguyen, Thien Hai Do

Background

Influenza is a common contagious respiratory virus that primarily causes respiratory tract infections. Neurological complications associated with influenza have also been reported, mainly in pediatric populations, and may be fatal.

Methods

A descriptive study evaluated pediatric patients who were diagnosed with severe influenza-associated neurological complications at the Tropical Pediatrics Center—Vietnam National Children's Hospital from October 2022 to February 2024.

Results

In this study involving 20 patients, 80% of children were under 5 years old; 70% of patients had a history of good health. All patients had not received an influenza vaccination within 12 months. The median time from onset to neurological symptoms was 1 day. The most common neurological complication was encephalitis (16/20 patients) with symptoms included altered consciousness and seizures. Most patients had elevated levels of ALT (60%), AST (90%), LDH (94%), and ferritin (69%) in serum. The imaging of brain damage on MRI and CT scans varied in patterns and locations. There was no difference in the timing of methylprednisolone treatment within and after 48 h. The mortality rate was 20%, with 45% of patients experiencing severe sequelae.

Conclusions

IANCs are severe with damage to both white matter and central gray matter and can occur in healthy children, emphasizing the importance of vaccination to reduce the risk.

背景:流感是一种常见的传染性呼吸道病毒,主要引起呼吸道感染。与流感相关的神经系统并发症也有报道,主要发生在儿童群体中,而且可能是致命的:一项描述性研究对 2022 年 10 月至 2024 年 2 月期间在越南国立儿童医院热带儿科中心确诊为严重流感相关神经系统并发症的儿科患者进行了评估:在这项涉及20名患者的研究中,80%的儿童年龄在5岁以下;70%的患者健康状况良好。所有患者在 12 个月内都没有接种过流感疫苗。从发病到出现神经系统症状的中位时间为 1 天。最常见的神经系统并发症是脑炎(16/20 例患者),症状包括意识改变和癫痫发作。大多数患者血清中的谷丙转氨酶(60%)、谷草转氨酶(90%)、LDH(94%)和铁蛋白(69%)水平升高。核磁共振成像和 CT 扫描显示的脑损伤模式和位置各不相同。甲泼尼龙治疗时间在48小时内和48小时后没有差异。死亡率为20%,45%的患者有严重后遗症:IANC严重损害白质和中央灰质,可发生在健康儿童身上,强调了接种疫苗以降低风险的重要性。
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引用次数: 0
Expansion of Laboratory Capacity in the Eastern Mediterranean Region During the COVID-19 Pandemic: Lessons Learned and Future Strategies for Sustainability 在 COVID-19 大流行期间扩大东地中海地区的实验室能力:经验教训与未来可持续性战略》。
IF 4.3 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-11-04 DOI: 10.1111/irv.70030
John McCauley, Maria Van Kerkhove, Laith Jamal Abu Raddad, Luke Meredith, Richard Brennan, Abdinasir Abubakar, Amal Barakat
<p>The COVID-19 pandemic posed unprecedented challenges to healthcare systems globally, necessitating a rapid and robust response from all sectors, from public health to commerce. A key effort in response was the need for a substantial expansion in laboratory testing and diagnosis to monitor the spread of the virus and to provide critical data to support effective public health measures. The scale of the threat drove research and innovation in laboratory diagnostics and genomic surveillance, enhancing testing capabilities and providing technological support to countries that previously did not have access to the key capabilities for rapid detection of pathogens that are necessary to prevent the next outbreak from becoming a pandemic.</p><p>The WHO Eastern Mediterranean Region (EMR) comprises the Occupied Palestinian Territories and 21 member states: Afghanistan, Bahrain, Djibouti, Egypt, Iran, Iraq, Jordan, Kuwait, Lebanon, Libya, Morocco, Oman, Pakistan, Qatar, Saudi Arabia, Somalia, Sudan, Syrian Arab Republic, Tunisia, United Arab Emirates, and Yemen. These countries have a diverse range of socio-economic and demographic conditions, and many are facing humanitarian crises caused by civil conflict and natural disasters. Despite these challenges, member states in the region, supported by national, regional, and international stakeholders, were able to mount variable but largely robust laboratory responses, increasing COVID-19 diagnostic and genomics capacity to covering 100% of the region [<span>1</span>]. This special issue provides an insight into the challenges faced in this rapid scale-up of capacity, as well as the extraordinary efforts taken to overcome them during the pandemic.</p><p>The key initiatives highlighted throughout this issue are now being redirected towards a sustainable laboratory network with the capacity to detect and respond to new and re-emerging pathogens that pose threats to public health in the region and globally, with the goal of preventing the next outbreak from becoming a pandemic. The investment in strengthening testing capacity, through molecular platforms such as PCR and genomics, that play a pivotal role in detecting and monitoring COVID-19 and other respiratory viruses, are now being expanded to include detection of priority pathogens with epidemic and pandemic potential such as other respiratory pathogens (e.g., MERS-CoV), arboviruses (e.g., dengue), and hemorrhagic fevers (e.g. CCHF), which periodically threaten the region. These capacities are being strengthened and sustained through the development of and investment in national and regional strategies to support genomic surveillance in the region, with efforts underway to establish steering committees and technical working groups to sustain, standardize and enhance genomic sequencing in the region [<span>2</span>], as well as the continued expansion of quality assurance networks to ensure that laboratories continue to produce robust, reliable results to su
COVID-19 大流行给全球医疗保健系统带来了前所未有的挑战,需要从公共卫生到商业等各个部门做出迅速而有力的反应。应对措施中的一项关键工作是需要大幅扩大实验室检测和诊断,以监测病毒的传播,并提供关键数据,支持有效的公共卫生措施。威胁的规模推动了实验室诊断和基因组监测方面的研究和创新,提高了检测能力,并为以前无法获得快速检测病原体的关键能力的国家提供了技术支持,而这些能力是防止下一次疫情爆发成为大流行所必需的:世卫组织东地中海区域包括巴勒斯坦被占领土和 21 个成员国:阿富汗、巴林、吉布提、埃及、伊朗、伊拉克、约旦、科威特、黎巴嫩、利比亚、摩洛哥、阿曼、巴基斯坦、卡塔尔、沙特阿拉伯、索马里、苏丹、阿拉伯叙利亚共和国、突尼斯、阿拉伯联合酋长国和也门。这些国家的社会经济和人口状况各不相同,许多国家还面临着国内冲突和自然灾害造成的人道主义危机。尽管面临这些挑战,但在国家、地区和国际利益相关者的支持下,该地区的成员国能够采取不同但基本有力的实验室应对措施,将 COVID-19 诊断和基因组学能力提高到覆盖该地区的 100%[1]。本期特刊深入探讨了在迅速扩大能力过程中所面临的挑战,以及在疫情期间为克服这些挑战所付出的非凡努力。本期特刊重点介绍的关键举措目前正转向建立一个可持续的实验室网络,该网络应具备检测和应对对该地区和全球公共卫生构成威胁的新病原体和再次出现的病原体的能力,其目标是防止下一次疫情爆发成为大流行。通过聚合酶链反应(PCR)和基因组学等分子平台加强检测能力的投资,在检测和监测 COVID-19 和其他呼吸道病毒方面发挥了关键作用,目前正在扩大到检测具有流行和大流行潜力的重点病原体,如其他呼吸道病原体(如 MERS-CoV)、虫媒病毒(如登革热)和出血热(如 CCHF),这些病原体定期威胁该地区。这些能力正在通过制定和投资国家和地区战略得到加强和维持,以支持该地区的基因组监测,目前正在努力建立指导委员会和技术工作组,以维持、规范和加强该地区的基因组测序工作[2],并继续扩大质量保证网络,以确保实验室继续提供可靠的结果,支持公共卫生行动[3, 4]。国际病原体监测网络(ISPN)的启动恰逢其时,该地区的成员国将为新型基因组和分子检测平台在未来的可持续发展提供支持。虽然下一代测序为病原体的基因组特征描述提供了宝贵的见解,有助于跟踪病毒变异和识别新出现的 SARS-CoV-2 变种,但集体努力需要侧重于长期战略,以确保这些平台在资金和技术上的可持续性。事实上,世卫组织东地中海地区办事处正在与成员国和国际利益相关者[2, 5](包括国际蛋白质组网络)合作,实施一项基因组监测区域战略,该战略将支持和授权成员国发展基因组测序和能力。这种积极主动的方法将使医疗保健系统能够调整和定制应对策略,最大限度地发挥基因组学的影响,同时将未来疫情爆发的潜在影响降至最低。该地区的主要利益相关方一直在为实验室规程等领域的培训提供支持,但现在的重点必须转向如何将这些新平台整合到现有的监测网络中,以提供可用的、与流行病学相关的、信息丰富的数据,从而支持公共卫生应对措施。实验室是公共卫生应对措施的关键支柱,需要与快速反应和监测团队合作,确保收集到高质量的样本和数据,从而得出高质量的结果。
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引用次数: 0
Virological and Clinical Outcomes of Influenza Outpatients Treated With Baloxavir, Oseltamivir, or Laninamivir in the 2023-2024 Season. 2023-2024 年流感季节使用巴洛沙韦、奥司他韦或拉尼那韦治疗流感门诊患者的病毒学和临床结果。
IF 4.3 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-11-01 DOI: 10.1111/irv.70042
Takeyuki Goto, Naoki Kawai, Takuma Bando, Yoshio Takasaki, Shizuo Shindo, Tomonori Sato, Naoki Tani, Yong Chong, Hideyuki Ikematsu

Background: Clinical data on patients infected with influenza B Victoria (BV) after the approval of baloxavir is lacking.

Methods: This observational study of the Japanese 2023-2024 influenza season analyzed data from 25 outpatients with A(H1N1)pdm09, 36 with A(H3N2), and 65 with BV. Viral samples were collected before and after administering an antiviral (70 patients received baloxavir and 56 received a neuraminidase inhibitor), on days 1, 5, and 10. Isolated viruses after culturing were amplified using RT-PCR and sequenced to detect mutations of concern, including acidic protein (PA)-amino acid (AA) E23X/I38X for influenza A and M34X/I38X for BV. Fever and symptoms were tracked via self-reporting diaries.

Results: No PA-AA-substituted virus was detected from 126 pre-treatment samples. In the baloxavir cohort, one (7.1%, 1/14) PA I38F-substituted A(H1N1)pdm09 and two (11.1%, 2/18) PA I38T-substituted A(H3N2) viruses were isolated on day 5 but not on day 10. No (0%, 0/37) PA-AA-substituted BV was detected on day 5 or after. The virus isolation rate on day 5 was higher among patients with BV than with influenza A in both baloxavir (35.1% vs. 14.3% for A(H1N1)pdm09 and 16.7% for A(H3N2)) and oseltamivir-treated patients (44.4% vs. 0% for A(H1N1)pdm09 and 33.3% for A(H3N2)). Patients with PA-AA-substituted influenza A after baloxavir administration did not have longer fever duration than those without virus isolation or with wild-type virus on day 5, for both A(H1N1)pdm09 and A(H3N2).

Conclusions: Baloxavir-resistant variants were not detected in influenza BV before treatment, as with A. The emergence of PA-AA-substituted influenza A after baloxavir administration was temporal and did not cause prolonged symptoms. No baloxavir-resistant BV variants were observed after baloxavir administration.

背景:缺乏有关巴洛沙韦获批上市后乙型流感维多利亚(BV)感染者的临床数据:方法:这项观察性研究分析了 25 名甲型 H1N1 pdm09 流感门诊患者、36 名甲型 H3N2 流感门诊患者和 65 名乙型流感门诊患者的数据:这项针对日本 2023-2024 年流感季节的观察性研究分析了 25 名甲型 H1N1 pdm09、36 名甲型 H3N2 和 65 名 BV 门诊患者的数据。在使用抗病毒药物(70 名患者使用巴洛沙韦,56 名患者使用神经氨酸酶抑制剂)前后的第 1、5 和 10 天采集了病毒样本。用 RT-PCR 扩增培养后分离出的病毒,并进行测序以检测相关突变,包括甲型流感的酸性蛋白 (PA) - 氨基酸 (AA) E23X/I38X 和乙型流感的 M34X/I38X。通过自我报告日记跟踪发热和症状:结果:126 份治疗前样本中未检测到 PA-AA 取代病毒。在巴洛沙韦队列中,第 5 天分离到 1 个(7.1%,1/14)PA I38F 取代的 A(H1N1)pdm09 病毒,第 10 天分离不到 2 个(11.1%,2/18)PA I38T 取代的 A(H3N2) 病毒。第 5 天及以后均未检测到 PA-AA 取代的 BV(0%,0/37)。在巴洛沙韦(A(H1N1)pdm09为35.1%对14.3%,A(H3N2)为16.7%)和奥司他韦(A(H1N1)pdm09为44.4%对0%,A(H3N2)为33.3%)治疗的患者中,第5天BV患者的病毒分离率高于甲型流感患者。就甲型 H1N1 pdm09 和甲型 H3N2 流感病毒而言,服用巴洛沙韦后感染 PA-AA 取代型甲型流感病毒的患者在第 5 天的发热持续时间并不比未分离病毒或感染野生型病毒的患者长:服用巴洛沙韦后出现的 PA-AA 取代型甲型流感是暂时性的,不会导致症状持续时间延长。服用巴洛沙韦后未发现耐巴洛沙韦的BV变异株。
{"title":"Virological and Clinical Outcomes of Influenza Outpatients Treated With Baloxavir, Oseltamivir, or Laninamivir in the 2023-2024 Season.","authors":"Takeyuki Goto, Naoki Kawai, Takuma Bando, Yoshio Takasaki, Shizuo Shindo, Tomonori Sato, Naoki Tani, Yong Chong, Hideyuki Ikematsu","doi":"10.1111/irv.70042","DOIUrl":"10.1111/irv.70042","url":null,"abstract":"<p><strong>Background: </strong>Clinical data on patients infected with influenza B Victoria (BV) after the approval of baloxavir is lacking.</p><p><strong>Methods: </strong>This observational study of the Japanese 2023-2024 influenza season analyzed data from 25 outpatients with A(H1N1)pdm09, 36 with A(H3N2), and 65 with BV. Viral samples were collected before and after administering an antiviral (70 patients received baloxavir and 56 received a neuraminidase inhibitor), on days 1, 5, and 10. Isolated viruses after culturing were amplified using RT-PCR and sequenced to detect mutations of concern, including acidic protein (PA)-amino acid (AA) E23X/I38X for influenza A and M34X/I38X for BV. Fever and symptoms were tracked via self-reporting diaries.</p><p><strong>Results: </strong>No PA-AA-substituted virus was detected from 126 pre-treatment samples. In the baloxavir cohort, one (7.1%, 1/14) PA I38F-substituted A(H1N1)pdm09 and two (11.1%, 2/18) PA I38T-substituted A(H3N2) viruses were isolated on day 5 but not on day 10. No (0%, 0/37) PA-AA-substituted BV was detected on day 5 or after. The virus isolation rate on day 5 was higher among patients with BV than with influenza A in both baloxavir (35.1% vs. 14.3% for A(H1N1)pdm09 and 16.7% for A(H3N2)) and oseltamivir-treated patients (44.4% vs. 0% for A(H1N1)pdm09 and 33.3% for A(H3N2)). Patients with PA-AA-substituted influenza A after baloxavir administration did not have longer fever duration than those without virus isolation or with wild-type virus on day 5, for both A(H1N1)pdm09 and A(H3N2).</p><p><strong>Conclusions: </strong>Baloxavir-resistant variants were not detected in influenza BV before treatment, as with A. The emergence of PA-AA-substituted influenza A after baloxavir administration was temporal and did not cause prolonged symptoms. No baloxavir-resistant BV variants were observed after baloxavir administration.</p>","PeriodicalId":13544,"journal":{"name":"Influenza and Other Respiratory Viruses","volume":"18 11","pages":"e70042"},"PeriodicalIF":4.3,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11573420/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142667761","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Technological Barriers to Routine Genomic Surveillance for Vaccine Development Against SARS-CoV-2 in Africa: A Systematic Review. 非洲常规基因组监测用于开发 SARS-CoV-2 疫苗的技术障碍:系统回顾。
IF 4.3 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-11-01 DOI: 10.1111/irv.70047
Kimberly Cheryl Chido Konono, Keiko Msusa, Samuel Mpinganjira, Adidja Amani, Charles Nyagupe, Michael Ngigi

The Global Initiative on Sharing All Influenza Data, a public-access database for sharing severe acute respiratory syndrome coronavirus 2 genomic sequencing data, has received significantly less data from African countries compared to the global total. Furthermore, the contribution of these data was infrequent and, for some countries, non-existent. The primary aim of this review is to identify the technological barriers to routine genomic surveillance in Africa. PubMed and Google Scholar were searched for the relevant articles, and other eligible articles were identified from the reference list examination according to the PRISMA checklist. Eighty-four full-text articles were analysed for eligibility, and 49 published full-texted articles were included in the final qualitative analysis. The main technological barriers identified were limited genomic surveillance capacity, limited genomic sequencing infrastructure, lack of resources and skilled or trained scientists, and the high cost of importing, establishing, and maintaining a genomic sequencing facility. The Africa Pathogen Genomics Initiative aims to improve genomic surveillance capacity across Africa, through resources, training, education, infrastructure, and regional sequencing centres. Furthermore, collaborations between African governments and international partners or national, private, and academic institutions are imperative to sustain genomic surveillance in Africa, and investment in genomic sequencing and research and development is paramount. Longer turnaround times interfere with global viral evolution monitoring and national implementation of effective policies to reduce the burden and disease. Establishing effective genomic surveillance systems guides public health responses and vaccine development for diseases endemic in Africa.

全球共享所有流感数据倡议是一个用于共享严重急性呼吸系统综合症冠状病毒 2 基因组测序数据的公共访问数据库,与全球总数相比,非洲国家提供的数据少得多。此外,这些数据的贡献并不频繁,有些国家甚至根本没有贡献数据。本综述的主要目的是找出非洲常规基因组监测的技术障碍。我们在 PubMed 和 Google Scholar 上检索了相关文章,并根据 PRISMA 核对表从参考文献列表中确定了其他符合条件的文章。对 84 篇全文文章进行了资格分析,49 篇已发表的全文文章被纳入最终定性分析。发现的主要技术障碍包括基因组监测能力有限、基因组测序基础设施有限、缺乏资源和熟练或训练有素的科学家,以及进口、建立和维护基因组测序设施的成本高昂。非洲病原体基因组计划旨在通过资源、培训、教育、基础设施和区域测序中心,提高整个非洲的基因组监测能力。此外,非洲各国政府与国际合作伙伴或国家、私营和学术机构之间的合作对于维持非洲的基因组监测至关重要,对基因组测序和研发的投资也至关重要。较长的周转时间会影响全球病毒演变监测和国家实施有效政策以减轻疾病负担。建立有效的基因组监测系统可以指导公共卫生应对措施和非洲流行病疫苗的开发。
{"title":"Technological Barriers to Routine Genomic Surveillance for Vaccine Development Against SARS-CoV-2 in Africa: A Systematic Review.","authors":"Kimberly Cheryl Chido Konono, Keiko Msusa, Samuel Mpinganjira, Adidja Amani, Charles Nyagupe, Michael Ngigi","doi":"10.1111/irv.70047","DOIUrl":"10.1111/irv.70047","url":null,"abstract":"<p><p>The Global Initiative on Sharing All Influenza Data, a public-access database for sharing severe acute respiratory syndrome coronavirus 2 genomic sequencing data, has received significantly less data from African countries compared to the global total. Furthermore, the contribution of these data was infrequent and, for some countries, non-existent. The primary aim of this review is to identify the technological barriers to routine genomic surveillance in Africa. PubMed and Google Scholar were searched for the relevant articles, and other eligible articles were identified from the reference list examination according to the PRISMA checklist. Eighty-four full-text articles were analysed for eligibility, and 49 published full-texted articles were included in the final qualitative analysis. The main technological barriers identified were limited genomic surveillance capacity, limited genomic sequencing infrastructure, lack of resources and skilled or trained scientists, and the high cost of importing, establishing, and maintaining a genomic sequencing facility. The Africa Pathogen Genomics Initiative aims to improve genomic surveillance capacity across Africa, through resources, training, education, infrastructure, and regional sequencing centres. Furthermore, collaborations between African governments and international partners or national, private, and academic institutions are imperative to sustain genomic surveillance in Africa, and investment in genomic sequencing and research and development is paramount. Longer turnaround times interfere with global viral evolution monitoring and national implementation of effective policies to reduce the burden and disease. Establishing effective genomic surveillance systems guides public health responses and vaccine development for diseases endemic in Africa.</p>","PeriodicalId":13544,"journal":{"name":"Influenza and Other Respiratory Viruses","volume":"18 11","pages":"e70047"},"PeriodicalIF":4.3,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11573421/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142667759","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
An Outbreak of Respiratory Viral Infections in a Professional Ice Hockey Team 职业冰球队爆发呼吸道病毒感染。
IF 4.3 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-10-31 DOI: 10.1111/irv.70041
Wilma Grönroos, Petri Helenius, Maarit Valtonen, Matti Waris, Olli J. Heinonen, Olli Ruuskanen

Background

Viral acute respiratory infections (ARIs) are an important cause of illness in athletes. However, their impact on ice hockey players is unclear.

Method

We describe an outbreak of ARIs in a professional ice hockey team.

Results

Contrary to expected influenza, the 40-day outbreak was caused by 8 different respiratory viruses, that is, 2 different influenza A viruses, human coronavirus-NL63 (HCoV-NL63), respiratory syncytial viruses (RSV) A and B, 2 different rhinoviruses, enterovirus D68, and parainfluenza type 2 virus.

Conclusion

Only influenza A and HCoV-NL63 were possibly spread within the team thus suggesting an important contraction from the community. The burden of illness was substantial.

背景:病毒性急性呼吸道感染(ARI)是导致运动员患病的重要原因之一。然而,它们对冰上曲棍球运动员的影响尚不明确:我们描述了在一支职业冰球队中爆发的急性呼吸道感染:结果:与预期的流感不同,这次为期 40 天的疫情是由 8 种不同的呼吸道病毒引起的,即 2 种不同的甲型流感病毒、人冠状病毒-NL63(HCoV-NL63)、甲型和乙型呼吸道合胞病毒(RSV)、2 种不同的鼻病毒、肠道病毒 D68 和 2 型副流感病毒:结论:只有甲型流感病毒和 HCoV-NL63 有可能在团队中传播,这表明有大量病毒来自社区。患病人数众多。
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引用次数: 0
Severe Acute Respiratory Infection (SARI) due to Influenza in Post-COVID Resurgence: Disproportionate Impact on Older Māori and Pacific Peoples 流感复发后的严重急性呼吸道感染(SARI):对老年毛利人和太平洋岛屿族裔的影响不成比例。
IF 4.3 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-10-30 DOI: 10.1111/irv.70029
Isabella M. Y. Cheung, Janine Paynter, David Broderick, Adrian Trenholme, Cass A. Byrnes, Cameron C. Grant, S. Qiu Huang, Nikki Turner, Peter McIntyre

Objective

Influenza reemerged after a 2020–2021 hiatus in 2022, but understanding the resurgence needs pre-COVID era surveillance. We compared age- and ethnicity-specific incidence of severe acute respiratory infection (SARI) from a hospital network in Auckland, New Zealand, in 2022 against a baseline, 2012–2019.

Methods

Annual and monthly influenza SARI incidence per 1000 persons by age and ethnic group between 2012 and 2022 was calculated using resident population as the denominator. The hospitals capture most severe illness of the resident population.

Results

Influenza SARI incidence was highest among <1 year olds (2.62; 95% CI: 1.84–3.61) during 2012–2019, lowest at 6–14 years, and did not significantly increase until 50–64 years (0.35; 95% CI: 0.27–0.45), reaching 1.19 (95% CI: 0.57–1.55) in those ≥75 years. In all age groups, incidence was at least threefold higher in Māori and Pacific Peoples. No influenza SARI was identified in 2020–2021. In 2022, despite an early peak, annual incidence (<65 years) was lower than baseline in all ethnic groups, but incidence (≥65 years) in Māori (2.06; 95% CI: 1.22–3.26) and Pacific (3.94; 95% CI: 2.97–5.13) peoples was higher in 2022 than most baseline years, whereas incidence in NMNP (0.22; 95% CI: 0.14–0.32) was lower than any baseline year.

Conclusion

After no influenza 2020–2021, Auckland had an early, high, narrow peak in 2022. Stratification by age and ethnicity revealed striking discrepancies in incidence among Māori and Pacific adults over 65 years compared with NMNP adults, with implications for targeted vaccination strategies.

目的:流感在 2020-2021 年的间歇期后于 2022 年再次出现,但要了解流感的再次出现需要在 COVID 时代之前进行监测。我们比较了新西兰奥克兰一个医院网络在 2022 年与 2012-2019 年基线的严重急性呼吸道感染(SARI)年龄和种族特异性发病率:方法:以常住人口为分母,计算 2012 年至 2022 年期间按年龄和种族划分的每千人年度和月度流感 SARI 发病率。医院捕捉常住人口中病情最严重的人群:结语:流感 SARI 发病率在结语中最高:奥克兰在 2020-2021 年未发生流感之后,在 2022 年出现了一个早期、高发、窄幅高峰。根据年龄和种族进行的分层显示,65岁以上的毛利人和太平洋裔成年人的发病率与非毛利人和太平洋裔成年人相比存在显著差异,这对有针对性的疫苗接种策略产生了影响。
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引用次数: 0
Improvement of RBD-FC Immunogenicity by Using Alum–Sodium Alginate Adjuvant Against SARS-COV-2 使用海藻酸钠明矾佐剂提高 RBD-FC 对 SARS-COV-2 的免疫原性
IF 4.3 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-10-30 DOI: 10.1111/irv.70018
Mahboobeh Dehghan, Hossein Askari, Masoud Tohidfar, Seyed Omid Ranaei Siadat, Fataneh Fatemi

Background

Adjuvants use several mechanisms to boost immunogenicity and to modulate immune response. The strength of adsorption of antigen by adjuvants can be a determinant factor for significant improvement of immunopotentiation.

Methods

We expressed recombinant RBD-FC in PichiaPink Strain 4 and examined the vaccination of mice by vaccine formulation with different adjuvants (sodium alginate and aluminum hydroxide, alone and together).

Results

Sodium alginate significantly increased the immunogenicity and stability of RBD-FC antigen, so RBD-FC formulated with combined alginate and alum (AlSa) and sodium alginate alone showed higher antibody titer and stability. Immunogenicity of RBD-FC:AlSa was determined by serological assays including direct enzyme-linked immunosorbent assay (ELISA) and surrogate virus neutralization test (sVNT). High levels of IgGs and neutralizing antibodies were measured in serum of mice immunized with the RBD-FC:AlSa formulation. On the other hand, cytokines IL-10 and INF-γ were severely accumulated in response to RBD-FC:AlSa, and after 10 days, their accumulation was significantly declined, whereas IL-4 showed the highest and the lowest accumulation in response to alum and alginate, respectively.

Conclusions

Our data may suggest that combination of alum and sodium alginate has a better compatibility with RBD-FC in vaccine formulation.

背景:佐剂利用多种机制增强免疫原性和调节免疫反应。佐剂对抗原的吸附强度是显著提高免疫增强作用的决定性因素:方法:我们在 PichiaPink Strain 4 中表达了重组 RBD-FC,并研究了不同佐剂(海藻酸钠和氢氧化铝,单独使用或共同使用)的疫苗配方对小鼠的接种效果:结果:海藻酸钠明显增加了 RBD-FC 抗原的免疫原性和稳定性,因此海藻酸钠和明矾(AlSa)混合配制的 RBD-FC 和单独使用海藻酸钠配制的 RBD-FC 显示出更高的抗体滴度和稳定性。RBD-FC:AlSa 的免疫原性是通过血清学检测确定的,包括直接酶联免疫吸附试验(ELISA)和替代病毒中和试验(sVNT)。用 RBD-FC:AlSa 制剂免疫的小鼠血清中测得了高水平的 IgG 和中和抗体。另一方面,细胞因子 IL-10 和 INF-γ 在 RBD-FC:AlSa 的反应中严重积累,10 天后积累量明显下降,而 IL-4 在明矾和海藻酸的反应中分别显示出最高和最低的积累量:我们的数据可能表明,明矾和海藻酸钠的组合与 RBD-FC 在疫苗制剂中具有更好的相容性。
{"title":"Improvement of RBD-FC Immunogenicity by Using Alum–Sodium Alginate Adjuvant Against SARS-COV-2","authors":"Mahboobeh Dehghan,&nbsp;Hossein Askari,&nbsp;Masoud Tohidfar,&nbsp;Seyed Omid Ranaei Siadat,&nbsp;Fataneh Fatemi","doi":"10.1111/irv.70018","DOIUrl":"10.1111/irv.70018","url":null,"abstract":"<div>\u0000 \u0000 \u0000 <section>\u0000 \u0000 <h3> Background</h3>\u0000 \u0000 <p>Adjuvants use several mechanisms to boost immunogenicity and to modulate immune response. The strength of adsorption of antigen by adjuvants can be a determinant factor for significant improvement of immunopotentiation.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Methods</h3>\u0000 \u0000 <p>We expressed recombinant RBD-FC in PichiaPink Strain 4 and examined the vaccination of mice by vaccine formulation with different adjuvants (sodium alginate and aluminum hydroxide, alone and together).</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Results</h3>\u0000 \u0000 <p>Sodium alginate significantly increased the immunogenicity and stability of RBD-FC antigen, so RBD-FC formulated with combined alginate and alum (AlSa) and sodium alginate alone showed higher antibody titer and stability. Immunogenicity of RBD-FC:AlSa was determined by serological assays including direct enzyme-linked immunosorbent assay (ELISA) and surrogate virus neutralization test (sVNT). High levels of IgGs and neutralizing antibodies were measured in serum of mice immunized with the RBD-FC:AlSa formulation. On the other hand, cytokines IL-10 and INF-γ were severely accumulated in response to RBD-FC:AlSa, and after 10 days, their accumulation was significantly declined, whereas IL-4 showed the highest and the lowest accumulation in response to alum and alginate, respectively.</p>\u0000 </section>\u0000 \u0000 <section>\u0000 \u0000 <h3> Conclusions</h3>\u0000 \u0000 <p>Our data may suggest that combination of alum and sodium alginate has a better compatibility with RBD-FC in vaccine formulation.</p>\u0000 </section>\u0000 </div>","PeriodicalId":13544,"journal":{"name":"Influenza and Other Respiratory Viruses","volume":"18 11","pages":""},"PeriodicalIF":4.3,"publicationDate":"2024-10-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/irv.70018","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142545288","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Factors Associated With Transmission Across Three Waves of SARS-CoV-2 in a Prospective Community-Based Study of Households With School-Aged Children—Dane County, Wisconsin, 2020–2022 2020-2022 年威斯康星州戴恩县以社区为基础对有学龄儿童的家庭进行的前瞻性研究中与 SARS-CoV-2 的三次传播相关的因素。
IF 4.3 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-10-30 DOI: 10.1111/irv.70031
Ajay K. Sethi, Cristalyne Bell, Derek Norton, Maureen D. Goss, Shari Barlow, Guanhua Chen, Amra Uzicanin, Jonathan L. Temte

Background

Household transmission of SARS-CoV-2 is a driver of the ongoing COVID-19 pandemic. Understanding factors that contribute to secondary infection risks (SIRs) can define changing trends and inform public health policies.

Methods

The ORegon CHild Absenteeism due to Respiratory Disease Study (ORCHARDS) prospectively monitors respiratory viruses within the Oregon School District (OSD) in southcentral Wisconsin. Households with students who had ≥ 2 respiratory symptoms were eligible and opted to participate in ORCHARDS. Between October 28, 2020, and May 16, 2022, all household members provided self-collected nasal specimens on days 0, 7, and 14 for SARS-CoV-2 detection using real-time reverse-transcription-polymerase chain reaction. We used logistic regression to investigate individual- and household-level characteristics associated with SARS-CoV-2 transmission.

Results

Overall, 127 households comprising 572 individuals (48% female; 52% male; 0.4% nonbinary; 77% ≥ 18 years) had at least one detection of SARS-CoV-2. The overall SIR was 47% and decreased over time (pre-Delta = 72% [95% CI: 58%–83%]; Delta = 51% [40%–63%]; and Omicron = 41% [36%–47%]). Odds of household transmission were 63% lower during the Omicron period compared with the pre-Delta period (OR = 0.36 [95% CI: 0.13–0.94] p = 0.037). Greater household density (members/bedroom) was significantly associated with household transmission during the Omicron period (OR = 6.8, [2.19–21.37] p = 0.001). Index case age, illness severity, and individual symptoms were not significantly associated with odds of household transmission.

Conclusions

Greater household density was associated with a higher risk of SARS-CoV-2 transmission, but the risk declined over time with subsequent variants. Interplay between variants, prior infection, and individual/household factors may identify modifiable factors (e.g., behavior and vaccination) to reduce future transmission risk.

背景:SARS-CoV-2 的家庭传播是目前 COVID-19 大流行的驱动因素。了解导致二次感染风险(SIRs)的因素可以确定不断变化的趋势并为公共卫生政策提供信息:奥勒冈呼吸道疾病儿童缺勤研究(ORCHARDS)对威斯康星州中南部奥勒冈学区(OSD)的呼吸道病毒进行了前瞻性监测。有学生出现≥2次呼吸道症状的家庭符合条件并选择参加 ORCHARDS。在 2020 年 10 月 28 日至 2022 年 5 月 16 日期间,所有家庭成员在第 0、7 和 14 天提供自采的鼻腔标本,使用实时反转录聚合酶链反应检测 SARS-CoV-2。我们使用逻辑回归法研究了与 SARS-CoV-2 传播相关的个人和家庭特征:总体而言,127 个家庭的 572 名成员(48% 为女性;52% 为男性;0.4% 为非二元性别;77% ≥ 18 岁)中至少有一人检测到了 SARS-CoV-2。总体 SIR 为 47%,并随时间推移而下降(德尔塔前 = 72% [95% CI:58%-83%];德尔塔 = 51% [40%-63%];奥米克隆 = 41% [36%-47%])。与德尔塔前相比,Omicron 阶段的家庭传播几率降低了 63% (OR = 0.36 [95% CI: 0.13-0.94] p = 0.037)。在奥米克隆时期,家庭密度(成员/卧室)的增加与家庭传播显著相关(OR = 6.8,[2.19-21.37] p = 0.001)。指标病例年龄、病情严重程度和个人症状与家庭传播几率无明显关联:结论:家庭密度越大,SARS-CoV-2 传播的风险越高,但随着时间的推移,风险随着变异株的增加而降低。变种、先前感染和个人/家庭因素之间的相互作用可能会确定可改变的因素(如行为和疫苗接种),从而降低未来的传播风险。
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引用次数: 0
Detection of H1N1 Influenza Virus in the Bile of a Severe Influenza Mouse Model 在严重流感小鼠模型胆汁中检测甲型 H1N1 流感病毒
IF 4.3 4区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2024-10-25 DOI: 10.1111/irv.70012
Yan Liu, Jiuyang Xu, Cheng Wei, Yitian Xu, Chen Lyu, Mingzhi Sun, Ying Zheng, Bin Cao

Aims

Influenza virus infection may lead to fatal complications including multi-organ failure and sepsis. The influenza virus was detected in various extra-pulmonary organs in autopsy studies during the 2009 pandemic. However, limited research has been conducted on the presence of viral particle or viral components in the peripheral blood.

Methods and Results

We established a mouse model for severe H1N1 influenza. The bile and blood samples were collected over time and inoculated into embryonated chicken eggs. We detected live influenza virus in bile and blood samples in early infection. Immunofluorescence showed influenza viral components in the liver tissue. No live virus was isolated in the bile in mice intragastrically administered with influenza virus, indicating that the virus was spread from the blood stream. Targeted metabolomics analysis of bile acid and liver tissues showed that a secondary bile acid (3-dehydrocholic acid) was decreased after influenza H1N1 infection. Genes related with fatty acid metabolism and bile secretion pathways were down-regulated in liver after influenza virus infection.

Conclusion

Our study indicated that influenza virus viremia is present in severe influenza, and that the liver is a target organ for influenza viral sepsis.

目的:流感病毒感染可能导致致命的并发症,包括多器官衰竭和败血症。在 2009 年流感大流行期间进行的尸检研究中,在多个肺外器官中检测到了流感病毒。然而,关于外周血中是否存在病毒颗粒或病毒成分的研究却十分有限:我们建立了一个重症甲型 H1N1 流感小鼠模型。方法:我们建立了一个重症甲型 H1N1 流感小鼠模型,在一段时间内收集胆汁和血液样本,并将其接种到鸡胚蛋中。我们在感染早期的胆汁和血液样本中检测到了活流感病毒。免疫荧光显示肝组织中有流感病毒成分。胃内注射流感病毒的小鼠胆汁中没有分离到活病毒,这表明病毒是从血液中传播的。胆汁酸和肝组织的靶向代谢组学分析表明,感染甲型 H1N1 流感后,一种次级胆汁酸(3-脱氢胆酸)减少。与脂肪酸代谢和胆汁分泌途径相关的基因在感染流感病毒后在肝脏中下调:我们的研究表明,重症流感患者体内存在流感病毒病毒血症,肝脏是流感病毒败血症的靶器官。
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引用次数: 0
期刊
Influenza and Other Respiratory Viruses
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