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Effects of hsa-piR-32877 Suppression with Antisense LNA GapmeRs on the Proliferation and Apoptosis of Human Acute Myeloid Leukemia Cells. 反义LNA-GapmeRs抑制hsa-piR-32877对人急性髓细胞白血病细胞增殖和凋亡的影响。
Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-01-01 DOI: 10.22088/IJMCM.BUMS.12.1.18
Sepideh Nasseri, Mohammadreza Sharifi, Valiollah Mehrzad

Acute myeloid leukemia (AML) is an invasive form of hematologic malignancies which results in the overproduction of myeloid cells in the bone marrow. Aberrant expression of piwi-interacting RNAs (piRNAs) which belong to small non-coding RNAs, play important roles in different cancer cells' progress. hsa- piR- 32877 is up-regulated in AML. Down regulation of hsa-piR-32877 by antisense LNA GapmeRs could be potential for suppression of myeloid cell proliferation and induce myeloid cell apoptosis. We have blocked the expression of hsa-piR-32877 by antisense LNA GapmeRs in human bone marrow blast cells, and the M-07e cell line. Samples were transfected with antisense LNA GapmeRs at 24, 48, and 72 hours. The Quantitative reverse transcriptase polymerase chain reaction (qRT-PCR) was performed to investigate the expression of hsa-piR-32877, CASP3, and CASP9. Both CASP3 and CASP9 play important roles in apoptosis. Cell proliferation was studied via CFSE (carboxyfluorescein diacetate succinimidyl ester) assay. Results showed that hsa-piR-32877 was down-regulated by antisense LNA GapmeRs in the patient and cell line samples. Also, after transfection, cell proliferation and apoptosis decreased and increased, respectively. Our data suggested that hsa-piR-32877 suppression may act as a novel therapeutic method for the inhibition of human leukemic cells proliferation in AML.

急性髓细胞白血病(AML)是一种侵袭性血液系统恶性肿瘤,导致骨髓中髓细胞过度产生。piwi-interacting RNA(piRNA)属于小的非编码RNA,其异常表达在不同癌症细胞的发展过程中起着重要作用。hsa-piR-32877在AML中表达上调。反义LNA-GapmeRs下调hsa-piR-32877可能具有抑制髓系细胞增殖和诱导髓系细胞凋亡的潜力。我们已经通过反义LNA-GapmeRs阻断了hsa-piR-32877在人骨髓母细胞和M-07e细胞系中的表达。在24、48和72小时用反义LNA-GapmeR转染样品。定量逆转录聚合酶链式反应(qRT-PCR)研究hsa-piR-32877、CASP3和CASP9的表达。CASP3和CASP9在细胞凋亡中均起重要作用。通过CFSE(羧基荧光素二乙酸酯琥珀酰亚胺酯)测定法研究细胞增殖。结果显示,在患者和细胞系样品中,hsa-piR-32877被反义LNA-GapmeRs下调。此外,转染后,细胞增殖和凋亡分别减少和增加。我们的数据表明,hsa-piR-32877的抑制可能是抑制AML中人类白血病细胞增殖的一种新的治疗方法。
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引用次数: 0
Sex-based Dysregulation of Inflammation-related Genes in Periodontitis. 牙周炎中炎症相关基因的性别失调
Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-01-01 DOI: 10.22088/IJMCM.BUMS.12.3.300
Soudeh Ghafouri-Fard, Leila Gholami, Elham Badrlou, Saba Sadeghpour, Naghme Nazer, Mahdi Shadnoush, Sheyda Khalilian, Arezou Sayad

Periodontitis is a chronic inflammatory condition affecting a large population all over the world. This condition is linked with abnormal expression of numerous genes. We measured levels of CYFIP1, KDR, RABGGTA, RABGGTB and FOXD2 in gingival tissue and circulation of people with periodontitis and healthy controls. KDR was more expressed in tissue samples of female patients compared with female controls (Ratio of mean expression (RME) =4.16, P=0.02). However, this gene was less expressed in the blood of female patients compared with female control subjects (RME=0.12, P=0.04). RABGGTB was less expressed in the blood of male patients compared with male controls (RME=0.20, P=0.02). Finally, FOXD2 was less expressed in total blood samples compared with total controls (RME=0.3, P<0.001) and in blood samples of female patients compared with female control subjects (RME=0.02, P<0.001). RABGGTA had the best area under curve (AUC) value in differentiation of patients' tissues from normal tissues (AUC=0.60, sensitivity=0.37, specificity=0.92). In distinction of abnormal blood samples from controls, FOXD2 had the best performance (AUC=0.85, sensitivity=0.66, specificity=0.91). In brief, we demonstrated a sex-dependent dysregulation of KDR, RABGGTB and FOXD2 genes in circulation or tissue of patients with periodontitis.

牙周炎是一种慢性炎症,影响着世界各地的众多人群。牙周炎与许多基因的异常表达有关。我们测量了牙周炎患者和健康对照组的牙龈组织和血液循环中 CYFIP1、KDR、RABGGTA、RABGGTB 和 FOXD2 的水平。与女性对照组相比,KDR 在女性患者组织样本中的表达量更高(平均表达量之比(RME)=4.16,P=0.02)。然而,与女性对照组相比,该基因在女性患者血液中的表达较少(RME=0.12,P=0.04)。与男性对照组相比,RABGGTB 在男性患者血液中的表达较低(RME=0.20,P=0.02)。最后,与对照组相比,FOXD2 在全部血液样本中的表达量较低(RME=0.3,P=0.04),PRABGGGTA 在区分患者组织与正常组织方面具有最佳的曲线下面积(AUC)值(AUC=0.60,灵敏度=0.37,特异性=0.92)。在区分异常血液样本和对照组样本时,FOXD2 的表现最好(AUC=0.85,灵敏度=0.66,特异性=0.91)。简而言之,我们证明了牙周炎患者血液循环或组织中的 KDR、RABGGTB 和 FOXD2 基因存在性别依赖性失调。
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引用次数: 0
EBV and HPV Infections in Colorectal Cancer and Their Effect on P53 and P16 Protein Expression. 结直肠癌中的 EBV 和 HPV 感染及其对 P53 和 P16 蛋白表达的影响
Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-01-01 DOI: 10.22088/IJMCM.BUMS.12.3.288
Arefeh Ebrahimian Shiadeh, Vahideh Hamidi Sofiani, Saghar Saber Amoli, Mahdie Taheri, Alijan Tabarraei, Hadi Razavi Nikoo, Farzin Sadeghi, Sorayya Khafri, Ghodsieh Kamrani, Yousef Yahyapour, Abdolvahab Moradi

Viral infections contribute to 15-20% of newly diagnosed cancers worldwide. There is evidence of a possible etiological role of Epstein-Barr virus (EBV) and high-risk human papillomaviruses (HR-HPVs) in colorectal carcinoma (CRC). Loss of p53 and p16 function has been found in many cancers and this may occur in many different ways, including gene mutation or interaction with viral oncoproteins. This study aimed to evaluate the presence of EBV and HPV in CRC patients in northern Iran and to assess p53 and p16 protein expression related to these viral infections. Real-time PCR was used to amplify the DNA sequences of these viruses in 55 colorectal tumoral tissues, along with their corresponding non-tumoral adjacent tissues. Additionally, immunohistochemistry (IHC) was utilized to determine p53 and p16 protein expression. EBV DNA was detected in 49.1% of CRC tissues. Furthermore, HPV DNA was present in 7.3% of CRC tissues. Notably, the prevalence of EBV infection in tumoral tissues was significantly higher than in non-tumoral tissues (P=0.001). The EBV DNA polymerase catalytic subunit (BALF5) copy number in tumoral tissues was higher than in non-tumoral tissues and this difference was statistically significant (P=0.008). P53 was positive in 21/26 (80.8%) EBV-positive and in 11/25 (44%) EBV-negative samples and this difference was significant (P=0.007). P16 was positive in 13/26 (50%) EBV-positive and in 14/25 (58.3%) EBV-negative samples (P= 0.668). Our findings suggest that EBV infection can increase the risk of CRC. In addition, EBV seems to stabilize p53 in EBV-positive CRC which needs further research. No significant correlation was detected between EBV infection and p16 expression. Also, we could not find a causal relationship between HPV infection and CRC in the study population.

病毒感染占全球新诊断癌症的 15-20%。有证据表明,Epstein-Barr 病毒(EBV)和高危人乳头瘤病毒(HR-HPV)可能是结直肠癌(CRC)的致病因素。在许多癌症中都发现了 p53 和 p16 功能的缺失,这种缺失可能以多种不同的方式发生,包括基因突变或与病毒癌蛋白相互作用。本研究旨在评估伊朗北部癌症患者中是否存在 EBV 和 HPV,并评估与这些病毒感染相关的 p53 和 p16 蛋白表达。研究采用实时 PCR 技术扩增 55 例结直肠肿瘤组织及其相应的非肿瘤邻近组织中这些病毒的 DNA 序列。此外,还利用免疫组化(IHC)技术确定了 p53 和 p16 蛋白的表达。在 49.1% 的 CRC 组织中检测到了 EBV DNA。此外,7.3%的 CRC 组织中存在 HPV DNA。值得注意的是,肿瘤组织中的 EBV 感染率明显高于非肿瘤组织(P=0.001)。肿瘤组织中的 EBV DNA 聚合酶催化亚基(BALF5)拷贝数高于非肿瘤组织,差异有统计学意义(P=0.008)。在 21/26 份(80.8%)EBV 阳性样本和 11/25 份(44%)EBV 阴性样本中,P53 呈阳性,差异有显著性(P=0.007)。在 13/26 份(50%)EBV 阳性样本和 14/25 份(58.3%)EBV 阴性样本中,P16 呈阳性(P= 0.668)。我们的研究结果表明,EBV 感染会增加罹患癌症的风险。此外,EBV 似乎能稳定 EBV 阳性 CRC 中的 p53,这需要进一步研究。在 EBV 感染和 p16 表达之间没有发现明显的相关性。此外,在研究人群中,我们也没有发现 HPV 感染与 CRC 之间存在因果关系。
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引用次数: 0
CD44 rs13347C>T Variants in 3'UTR and Prostate Neoplasms: A Case-control Study and Bioinformatics Approach. 3'UTR 中的 CD44 rs13347C>T 变异与前列腺肿瘤:病例对照研究和生物信息学方法。
Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-01-01 DOI: 10.22088/IJMCM.BUMS.12.3.275
Emadoddin Moudi, Mohammadkazem Heydari, Abasalt Hosseinzadeh Colagar

CD44, a cell-surface receptor and a key player in cellular signaling, can act as both tumor suppressor and promoter. This study aimed to investigate the association of CD44 rs13347C>T variants with prostate neoplasms, including both benign prostatic hyperplasia (BPH) and prostate cancers using a case-control and bioinformatics approach. Genomic DNA was extracted from 545 blood samples (225 BPH, 225 prostate cancers, and 95 control) and the CD44 rs13347C>T genotypes were identified using PCR-RFLP. We explored miRNA interactions using the miRNASNP-v3 database and GeneMANIA for co-expression networks. Results showed cancer patients had significantly higher PSA levels compared to both controls (p= 0.03) and BPH (p= 0.01). Additionally, digital rectal examination-positive and smoker BPH patients showed significantly the increased cancer risk (p= 0.004, p= 0.046). Prostate cancer group indicated significantly higher frequency of CD44 rs13347C>T mutant allele compared to control and BPH groups, particularly in TT and CT+TT genotypes (p < 0.05). miRNA SNP-v3 database predicted the mutant allele of CD44 rs13347C>T could lose 1 and gain 6 miRNAs for a new site created. Co-expression analysis revealed a direct interaction between CD44 and aryl hydrocarbon receptor (AHR), a gene known to be dysregulated in smokers. Furthermore, these genes alone display co-expression interactions with integrin subunit alpha 4 (ITGA4), protein plays a paradoxical role, both suppressing and promoting tumors. Based on the findings, the mutant allele of CD44 rs13347C>T may disrupt miRNA binding, which may potentially impact CD44, AHR, and ITGA4 expression in smokers, possibly contributing to prostate cancer progression.

CD44 是一种细胞表面受体,也是细胞信号传导的关键角色,既可作为肿瘤抑制因子,也可作为肿瘤促进因子。本研究旨在通过病例对照和生物信息学方法研究 CD44 rs13347C>T 变异与前列腺肿瘤(包括良性前列腺增生症和前列腺癌)的关系。我们从 545 份血液样本(225 份良性前列腺增生症样本、225 份前列腺癌样本和 95 份对照样本)中提取了基因组 DNA,并通过 PCR-RFLP 鉴定了 CD44 rs13347C>T 基因型。我们利用 miRNASNP-v3 数据库和 GeneMANIA 共同表达网络探讨了 miRNA 之间的相互作用。结果显示,癌症患者的 PSA 水平明显高于对照组(p= 0.03)和良性前列腺增生症患者(p= 0.01)。此外,数字直肠检查阳性和吸烟的良性前列腺增生患者患癌风险明显增加(p= 0.004,p= 0.046)。根据 miRNA SNP-v3 数据库预测,CD44 rs13347C>T 突变等位基因可能会丢失 1 个 miRNA,并在新的位点上获得 6 个 miRNA。共表达分析表明,CD44 与芳基烃受体(AHR)之间存在直接的相互作用。此外,这些基因单独与整合素亚基α4(ITGA4)存在共表达相互作用,而整合素亚基α4蛋白既能抑制肿瘤,又能促进肿瘤。根据研究结果,CD44 rs13347C>T的突变等位基因可能会破坏miRNA的结合,这可能会影响吸烟者体内CD44、AHR和ITGA4的表达,从而可能导致前列腺癌的进展。
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引用次数: 0
Combination Therapy in Cancer: Doxorubicin in Combination with an N-terminal Peptide of Endostatin Suppresses Angiogenesis and Stimulates Apoptosis in the Breast Cancer. 癌症联合疗法:多柔比星与内抑素 N-末端肽联用可抑制血管生成并刺激乳腺癌细胞凋亡
Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-01-01 DOI: 10.22088/IJMCM.BUMS.12.2.120
Narges Sarabi, Reyhane Chamani, Elham Assareh, Omid Saberi, S Mohsen Asghari

The combination of chemotherapy drugs with angiogenesis inhibitors improves response and survival and reduces the cytotoxic side effects and drug resistance in patients compared to chemotherapy alone. Here, we investigated the efficacy of the concomitant administration of doxorubicin and a peptide derived from the N-terminal domain of Endostatin (called ES-SS) in the 4T1 mammary carcinoma tumor model. Tumor-bearing mice were divided into the control and three treatment groups, including ES-SS, doxorubicin, and the combination. Injections were performed daily for two weeks and tumor volumes were measured during the treatment. Immunohistochemical analysis of Ki-67, CD31, CD34, Bcl-2, p53 expression, and TUNEL assay were performed on tumor tissues at the end of treatment. Besides, molecular dynamics and docking simulations were performed. It was demonstrated that tumor growth was inhibited in mice treated with peptide plus doxorubicin more significantly than in each treatment alone (P<0.05). No weight loss or adverse effects were observed. Moreover, combination therapy was more effective in tumor angiogenesis suppression and apoptosis stimulation (P<0.05). Docking simulations by ClusPro server demonstrated that ES-SS binds to integrin α5β1, Transglu-taminase 2, and Matrix metalloproteinase 2 with more negative binding energy and hydrogen bonds compared to the native peptide. Generally, we proposed that ES-SS can augment the therapeutic efficacy of doxorubicin through angiogenesis prevention and apoptosis induction in breast tumor. Owing to the advantages of peptides to recombinant proteins or monoclonal antibodies, further preclinical and clinical evaluations of this combination strategy are worth taking into consideration.

与单独化疗相比,化疗药物与血管生成抑制剂联合使用可提高患者的反应和生存率,减少细胞毒副作用和耐药性。在此,我们研究了在 4T1 乳腺癌模型中同时给予多柔比星和一种来自内ostatin N 端结构域的多肽(称为 ES-SS)的疗效。携带肿瘤的小鼠被分为对照组和三个治疗组,包括 ES-SS、多柔比星和联合治疗组。每天注射一次,连续两周,并在治疗期间测量肿瘤体积。治疗结束后,对肿瘤组织进行 Ki-67、CD31、CD34、Bcl-2、p53 表达的免疫组化分析和 TUNEL 检测。此外,还进行了分子动力学和对接模拟。结果表明,多肽加多柔比星对小鼠肿瘤生长的抑制作用比单独使用多肽加多柔比星更明显(P<0.05)。
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引用次数: 0
Isoproterenol Alters Metabolism, Promotes Survival and Migration in 5-Fluorouracil-Treated SW480 Cells with and without Beta-hydroxybutyrate. 异丙肾上腺素能改变经 5-氟尿嘧啶处理的 SW480 细胞的新陈代谢,促进其存活和迁移,无论其是否含有 β-羟丁酸。
Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-01-01 DOI: 10.22088/IJMCM.BUMS.12.2.144
Azam Shakery, Katayoun Pourvali, Ghazaleh Shimi, Hamid Zand

People with cancer often experience long-term physical and psychological stress, which can have a significant impact on tumor metabolism and treatment. The effects of adrenergic signaling on metabolic pathways are well known, but only a few studies have looked into the connection between this signaling and tumor metabolism. This study examined the effects of treatment with isoproterenol (Iso) alone and in combination with β-hydroxybutyrate (βHB), a mitochondrial fuel, on the metabolism, survival, and migration of SW480 colon cancer cells treated with 5-fluorouracil (5FU). The researchers measured the oxygen consumption rate (OCR) and extracellular acidification rate (ECAR) to determine the metabolic profile of these cells. They also analyzed the gene expression of PGC-1α, c-MYC, and NANOG to investigate the relationship between metabolic phenotype and stemness status. Scratch assays were used to assess cell migration. The results showed that Iso treatment increased cell viability in both SW480 and 5FU-treated SW480 cells. There was a significant decrease in ECAR and an increase in OCR after Iso treatment in both cell types. The expression of c-MYC and NANOG, genes associated with stemness, increased, while the expression of PGC-1α, a gene related to oxidative phosphorylation, decreased following Iso treatment. Iso treatment also increased the migration potential of both SW480 and 5FU-treated SW480 cells. These findings suggest that under stressful conditions, 5FU-treated colon cancer cells can utilize the oxidative phosphorylation pathway for growth and migration.

癌症患者经常会经历长期的生理和心理压力,这会对肿瘤代谢和治疗产生重大影响。肾上腺素能信号传导对新陈代谢途径的影响众所周知,但只有少数研究探讨了这种信号传导与肿瘤新陈代谢之间的联系。这项研究考察了单独使用异丙肾上腺素(Iso)和与线粒体燃料β-羟丁酸(βHB)联合使用对接受5-氟尿嘧啶(5FU)治疗的SW480结肠癌细胞的代谢、存活和迁移的影响。研究人员测量了耗氧率(OCR)和细胞外酸化率(ECAR),以确定这些细胞的代谢情况。他们还分析了PGC-1α、c-MYC和NANOG的基因表达,以研究代谢表型与干性状态之间的关系。划痕实验用于评估细胞迁移。结果显示,菘蓝处理提高了SW480细胞和5FU处理的SW480细胞的存活率。在两种细胞中,菘蓝处理后ECAR明显下降,OCR明显上升。与干性相关的基因c-MYC和NANOG的表达量增加,而与氧化磷酸化相关的基因PGC-1α的表达量在异烟肼处理后减少。异体处理还增加了SW480细胞和5FU处理的SW480细胞的迁移潜力。这些发现表明,在应激条件下,5FU 处理的结肠癌细胞可利用氧化磷酸化途径生长和迁移。
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引用次数: 0
Evaluation of Drug Resistance in the Tamoxifen-treated MKN-45 Gastric Cancer Cell Line via the Epithelial-mesenchymal Transition Signaling Pathway. 通过上皮-间质转化信号通路评估他莫昔芬治疗的 MKN-45 胃癌细胞系的耐药性
IF 1.5 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-01-01 DOI: 10.22088/IJMCM.BUMS.12.4.361
Zeinab Mahdian, Mahdi Pouramir, Hassan Akrami, Ebrahim Zabihi

One of the major challenges in gastric cancer (GC) chemotherapy is the phenomenon of multi-drug resistance (MDR). The epithelial-mesenchymal transition (EMT) and its key molecules, transforming growth factor-β (TGFβ) and SMAD2, play a central role in MDR occurrence. Tamoxifen (TAM), a triphenylethylene derivative, can overcome MDR in human gastric cancers. The aim of this study was to investigate the effect of TAM on 5-FU resistance of GC by suppressing the TGFβ1/SMAD2 signaling pathway and EMT. The MKN-45 cell line was subjected to treatment with 5-FU, TAM and a combination of both. The MTT assay was used to investigate the cytotoxic effects of 5-FU and TAM, and the DNA laddering technique was used to assess DNA fragmentation and apoptosis. Real-time RT-PCR examined the change in gene expression in EMT-related genes (SNAI2, VIM, TGFβ1 and SMAD2). The results of the present study indicated that not only TAM treatment significantly decreased the IC50 of 5-FU (P≤0.05), but also the addition of TAM to 5-FU induced apoptosis in the MKN-45 cell line. Treatment with TAM and 5-FU significantly inhibited TGFβ1 and TGFβ1-induced expression of EMT markers (VIM and SNAI2) in MKN-45 cells (P≤0.05). The reduction of TGFβ1 targets downstream of the SMAD2 signaling pathway reversed the process of EMT and significantly increased the sensitivity of MKN-45 cells to 5-FU. The results of the present study suggested that reversal of EMT-mediated MDR via the TGFβ1/SMAD signaling pathway using TAM may be a potential new therapeutic strategy to overcome chemoresistance to 5-FU during GC chemotherapy.

胃癌化疗面临的主要挑战之一是多药耐药性(MDR)现象。上皮-间质转化(EMT)及其关键分子转化生长因子-β(TGFβ)和SMAD2在MDR的发生中起着核心作用。他莫昔芬(TAM)是一种三苯乙烯衍生物,可以克服人类胃癌的 MDR。本研究旨在探讨他莫昔芬通过抑制TGFβ1/SMAD2信号通路和EMT对胃癌5-FU耐药的影响。MKN-45 细胞系接受了 5-FU、TAM 和两者的联合治疗。MTT试验用于研究5-FU和TAM的细胞毒性作用,DNA梯度技术用于评估DNA碎片和细胞凋亡。实时 RT-PCR 检测了 EMT 相关基因(SNAI2、VIM、TGFβ1 和 SMAD2)表达的变化。本研究结果表明,TAM不仅能显著降低5-FU的IC50(P≤0.05),而且在5-FU中加入TAM能诱导MKN-45细胞株凋亡。TAM和5-FU能明显抑制TGFβ1和TGFβ1诱导的MKN-45细胞EMT标记物(VIM和SNAI2)的表达(P≤0.05)。SMAD2信号通路下游TGFβ1靶点的减少逆转了EMT过程,并显著提高了MKN-45细胞对5-FU的敏感性。本研究的结果表明,利用TAM通过TGFβ1/SMAD信号通路逆转EMT介导的MDR可能是在GC化疗过程中克服5-FU化疗耐药的一种潜在的新治疗策略。
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引用次数: 0
Has_circ_0008285/miR-211-5p/SIRT-1 Axis Suppress Ovarian Cancer Cells Progression. Has_circ_0008285/miR-211-5p/SIRT-1轴抑制卵巢癌细胞的进展。
IF 1.5 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-01-01 DOI: 10.22088/IJMCM.BUMS.12.4.401
Khadijeh Elmizadeh, Ali Homaei, Ensiyeh Bahadoran, Farzaneh Abbasi, Sahar Moghbelinejad

The significant functional role of circular RNAs (circRNAs) in the progression of malignant tumors, including ovarian cancer, has been shown in various studies. In this study, we aimed to investigate the abnormal expression of hsa_circ_0008285 and its role in ovarian cancer pathogenesis. Quantitative real time polymerase chain reaction (qRT-PCR) and Western blot methods were used to detect the expression of hsa_circ_0008285 and some target genes in ovarian cancer tissues and related cell lines. To determine the functional roles of hsa_circ_0008285 in ovarian cancer, cell proliferation, apoptosis, and cell invasion assays were performed. Bioinformatics (Target scan, circ intractome) and luciferase reporter analyses were used to predict target genes. Results: In the present study, we first found that hsa_circ_0008285 was up regulated in ovarian cancer tissues and related cell lines. Bioinformatics, experimental data, and luciferase reporter analysis data showed miR-211-5p is a direct target of hsa_circ_0008285, while SIRT-1 is a direct target of miR-211-5p. Overexpression of hsa_circ_0008285 in cancer cells increased the expression of SIRT-1 and progression of cancer cells. Based on these results, inhibition of hsa_circ_0008285 expression could cause upregulation of miR-211-5p and down regulation of SIRT-1 and inhibited the proliferation and invasion of ovarian cancer cells. Conclusion: The results of the present study revealed that hsa_circ_0008285 suppressed ovarian cancer progression by regulating miR-211-5p expression to inhibit SIRT-1 expression.

多项研究表明,环状 RNA(circRNA)在包括卵巢癌在内的恶性肿瘤的进展过程中发挥着重要的功能作用。本研究旨在探讨 hsa_circ_0008285 的异常表达及其在卵巢癌发病机制中的作用。采用定量实时聚合酶链反应(qRT-PCR)和 Western 印迹法检测 hsa_circ_0008285 和一些靶基因在卵巢癌组织和相关细胞系中的表达。为了确定 hsa_circ_0008285 在卵巢癌中的功能作用,进行了细胞增殖、凋亡和细胞侵袭试验。使用生物信息学(靶标扫描、circ intractome)和荧光素酶报告分析预测靶基因。结果:在本研究中,我们首次发现 hsa_circ_0008285 在卵巢癌组织和相关细胞系中被上调。生物信息学、实验数据和荧光素酶报告分析数据显示,miR-211-5p 是 hsa_circ_0008285 的直接靶标,而 SIRT-1 是 miR-211-5p 的直接靶标。在癌细胞中过量表达 hsa_circ_0008285 会增加 SIRT-1 的表达和癌细胞的恶化。基于这些结果,抑制 hsa_circ_0008285 的表达可导致 miR-211-5p 的上调和 SIRT-1 的下调,从而抑制卵巢癌细胞的增殖和侵袭。结论本研究结果显示,hsa_circ_0008285通过调控miR-211-5p的表达抑制SIRT-1的表达,从而抑制卵巢癌的进展。
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引用次数: 0
Isolation, Identification and Screening of Saharan Actinomycete Strain Streptomyces fimbriatus AC31 Endowed with Antimicrobial Activity. 撒哈拉放线菌菌毛链霉菌AC31菌株的分离、鉴定和筛选。
Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-01-01 DOI: 10.22088/IJMCM.BUMS.12.1.51
Omar Khirennas, Slimane Mokrani, Belkacem Behira, Noureddine Bouras, El Hadj Driche, Ouahiba Moumen

The increasing global public health concern of antimicrobial resistance (AMR) necessitates exploration of natural antimicrobial agents as potential alternatives. This study aimed to investigate antimicrobial activities of Saharan actinomycetes, with specific focus on the strain Streptomyces fimbriatus AC31, that holds promising potential as an alternative to combat AMR. In this context, 32 actinomycetes were isolated from El Atteuf (Ghardaïa), Algeria. Isolates obtained were characterized morphologically and biochemically. Screened isolate was identified by 16S rRNA gene sequencing. Classification of actinomycete isolates was carried out by UPGMA (Unweighted Pair Group Method with Arithmetic Mean). Then, they were screened for their antimicrobial activity by cross-streak method. Identification of 32 isolates revealed 5 genera: Streptomyces (65.63%), Nocardia (9.38%), Streptosporangium (9.38%), Nocardiopsis (9.38%) and Actinomadura (6.25%). According to the biochemical and physiological characteristics, UPGMA classified the isolates in 4 phenons. A number of 24 (75.00%) isolates were active against Gram-positive bacteria, 21 (65.63%) isolates were effective against Gram-negative bacteria, and 25 (78.13%) isolates inhibited Candida albicans. Screened strain Streptomyces fimbriatus AC31 showed highest antagonistic activity and revealed an inhibition zones of 41, 38, 41, 42, and 44 mm, against B. subtilis (ATCC 6633), E. coli (ATCC 8739), S. typhimurium (ATCC 13331), S. aureus (ATCC 6538) and C. albicans (ATCC 10231), respectively. Phylogenetic identification of the AC 31 isolate using 16S rRNA gene sequence showed similarity of 100% with Streptomyces fimbriatus NBRC 15411T. Actinomycete isolates characterized in this study were endowed with antimicrobial activity against various pathogenic microorganisms that could be used efficiently in developing new antimicrobial substances.

抗微生物耐药性(AMR)日益引起全球公共卫生关注,因此有必要探索天然抗微生物剂作为潜在的替代品。本研究旨在研究撒哈拉放线菌的抗菌活性,特别关注具有对抗AMR潜力的菌毛链霉菌AC31菌株。在这种情况下,从阿尔及利亚的El Atteuf(Ghardaïa)分离到32种放线菌。对获得的分离物进行了形态学和生物化学表征。通过16S rRNA基因测序鉴定筛选出的分离物。用算术平均未加权对群法对放线菌进行分类。然后,用十字条纹法对其抗菌活性进行筛选。32个分离株共鉴定出5个属:链霉菌属(65.63%)、诺卡氏菌属(9.38%)、链孢囊菌属(93.8%)、诺卡氏菌属和放线菌属(6.25%)。24个(75.00%)分离株对革兰氏阳性菌有活性,21个(65.63%)分离株对白念珠菌有抑制作用,25个(78.13%)分离株抑制白色念珠菌。筛选菌株伞状链霉菌AC31显示出最高的拮抗活性,并显示出分别对枯草芽孢杆菌(ATCC6633)、大肠杆菌(ATCC8739)、鼠伤寒杆菌(ATCC113331)、金黄色葡萄球菌(ATCC6538)和白色念珠菌(ATCC10231)的41、38、41、42和44mm的抑制区。使用16S rRNA基因序列对AC 31分离株的系统发育鉴定显示,其与伞状链霉菌NBRC 15411T的相似性为100%。本研究中鉴定的放线菌分离株具有对各种病原微生物的抗菌活性,可有效用于开发新的抗菌物质。
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引用次数: 0
In Silico Molecular Docking of Phytochemicals for Type 2 Diabetes Mellitus Therapy: A Network Pharmacology Approach. 用于 2 型糖尿病治疗的植物化学物质的分子对接:网络药理学方法
IF 1.5 Q3 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2023-01-01 DOI: 10.22088/IJMCM.BUMS.12.4.372
Sooriyakala Rani Sri Prakash, Sree Meenakshi Kamalnath, Arul Jayanthi Antonisamy, Sivasankari Marimuthu, Sankar Malayandi

Identification of potential lead molecules in herbal medicines is crucial not only for validation but also for drug discovery. This study was focused on identifying the therapeutic mechanisms of 10 common herbs used to treat type 2 diabetes mellitus (T2DM) using network pharmacology and docking studies. Details pertaining to medicinal plants and their phytoconstituents were obtained from Indian Medicinal Plants, Phytochemistry, and Therapeutics and Dr. Duke's database, respectively. MolSoft was used to assess their drug likeness. Prediction of protein targets for the screened phytochemicals and the list of target genes involved in T2DM were obtained using Swiss TargetPrediction and GeneCards respectively. STRING; Cytoscape; Database for Annotation, Visualization, and Integrated Discovery; and PyRx were used for network construction, network analysis, gene ontology analysis, and molecular docking, respectively. The protein targets MAPK1, AKT1, PI3K, and EGFR were identified to play a crucial role in the progression of T2DM. Furthermore, molecular docking indicated that nimbaflavone exhibited high binding affinities for MAPK1 (-8.7 kcal/mole) and PI3K (-9.6 kcal/mole), whereas rutin and 10-hydroxyaloin-B showed high binding affinities for AKT1 (-7.4 kcal/mole) and EGFR (-8.1 kcal/mole), respectively. The findings from this study suggest that flavonoids are the major phytoconstituents that display antidiabetic activity by interacting with key protein molecules related to the MAPK and PI3K-AKT signaling pathways, thereby aiding in the treatment of T2DM. The activation of these pathways alters Ras-GTPase activity and enhances the expression of GLUT4, a glucose transporter, resulting in the uptake of glucose from the bloodstream.

鉴定草药中的潜在先导分子不仅对验证至关重要,而且对药物发现也至关重要。本研究的重点是利用网络药理学和对接研究确定 10 种用于治疗 2 型糖尿病(T2DM)的常见草药的治疗机制。药用植物及其植物成分的详细信息分别来自印度药用植物、植物化学和治疗学以及杜克博士数据库。使用 MolSoft 软件评估其药物相似性。使用 Swiss TargetPrediction 和 GeneCards 分别预测了筛选出的植物化学物质的蛋白质靶点和 T2DM 中涉及的靶基因列表。STRING、Cytoscape、Database for Annotation, Visualization, and Integrated Discovery和PyRx分别用于网络构建、网络分析、基因本体分析和分子对接。结果发现,蛋白靶标 MAPK1、AKT1、PI3K 和表皮生长因子受体(EGFR)在 T2DM 的进展中起着关键作用。此外,分子对接表明,宁巴黄酮与 MAPK1(-8.7 kcal/mole)和 PI3K(-9.6 kcal/mole)的结合亲和力较高,而芦丁和 10-hydroxyaloin-B 则分别与 AKT1(-7.4 kcal/mole)和 EGFR(-8.1 kcal/mole)的结合亲和力较高。这项研究的结果表明,黄酮类化合物是通过与 MAPK 和 PI3K-AKT 信号通路相关的关键蛋白分子相互作用而显示抗糖尿病活性的主要植物成分,从而有助于治疗 T2DM。这些途径的激活会改变 Ras-GTPase 的活性,并增强葡萄糖转运体 GLUT4 的表达,从而导致从血液中摄取葡萄糖。
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引用次数: 0
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International Journal of Molecular and Cellular Medicine
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