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High-Order Temporal Convolutional Network for Improving Classification Performance of SSVEP-EEG 用于提高 SSVEP-EEG 分类性能的高阶时空卷积网络
IF 4.8 4区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-03-09 DOI: 10.1016/j.irbm.2024.100830
Jianli Yang, Songlei Zhao, Wei Zhang, Xiuling Liu

Background and objective

Steady-state visual evoked potential (SSVEP)-based brain-computer interfaces (BCIs) aim to detect target frequencies corresponding to specific commands in electroencephalographic (EEG) signals by classification algorithms to achieve the desired control. However, SSVEP signals suffer from low signal-to-noise ratio and large differences in brain activity. Moreover, the existing CNN models have small receptive fields, which make it difficult to receive large range of feature information and limit the effectiveness of classification algorithms.

Methods

To this end, we proposed a high-order temporal convolutional neural network (HOT-CNN) model for enhancing the performance of SSVEP target recognition. Specifically, the SSVEP-EEG signals was divided into equal-length time segments and a time-slice attention module was designed to capture the correlation between time slices. The module improves the local characterization of signals and reduces biological noise interference by automatically assigning high weights to locally relevant temporal sampling cues and lower weights to other temporal cues. Moreover, for global features, a temporal convolutional network module was designed to increases the receptive field of the network and to extract more comprehensive time domain features by using dilated causal convolution. Finally, the fusion and analysis of local and global features are achieved by designing a feature fusion and classification module to accomplish accurate classification of SSVEP signals.

Results

Our method was evaluated on large publicly available datasets containing 35 subjects and 40 categories. Experimental results indicated that HOT-CNN achieved encouraging performance compared with other advanced methods: the highest information transfer rate of 241.01bits/min was obtained using 0.5s stimuli, and the highest average accuracy of 96.39% was obtained using 1.0s stimuli.

Conclusions

The method effectively reinforced the global and local time-domain information and improved the classification performance of SSVEP, which has wide application prospects.

基于稳态视觉诱发电位(SSVEP)的脑机接口(BCI)旨在通过分类算法检测脑电信号中与特定指令相对应的目标频率,从而实现所需的控制。然而,SSVEP 信号存在信噪比低和大脑活动差异大的问题。此外,现有 CNN 模型的感受野较小,难以接收大范围的特征信息,限制了分类算法的有效性。为此,我们提出了一种高阶时空卷积神经网络(HOT-CNN)模型,以提高 SSVEP 目标识别的性能。具体来说,我们将 SSVEP-EEG 信号划分为等长的时间片段,并设计了一个时间片关注模块来捕捉时间片段之间的相关性。该模块通过自动为与局部相关的时间采样线索分配高权重,为其他时间线索分配低权重,从而改善信号的局部特征,减少生物噪声干扰。此外,针对全局特征,还设计了一个时间卷积网络模块,以增加网络的感受野,并通过使用扩张因果卷积提取更全面的时域特征。最后,通过设计一个特征融合和分类模块,实现了局部和全局特征的融合与分析,从而完成了对 SSVEP 信号的精确分类。我们的方法在包含 35 个受试者和 40 个类别的大型公开数据集上进行了评估。实验结果表明,与其他先进方法相比,HOT-CNN 取得了令人鼓舞的性能:使用 0.5 秒刺激时,信息传输率最高,达到 241.01bits/min;使用 1.0 秒刺激时,平均准确率最高,达到 96.39%。该方法有效地强化了全局和局部时域信息,提高了 SSVEP 的分类性能,具有广泛的应用前景。
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引用次数: 0
Blockchain-Based Trusted Tracking Smart Sensing Network to Prevent the Spread of Infectious Diseases 基于区块链的可信追踪智能传感网络,防止传染病传播
IF 4.8 4区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-02-15 DOI: 10.1016/j.irbm.2024.100829
Riaz Ullah Khan , Rajesh Kumar , Amin Ul Haq , Inayat Khan , Mohammad Shabaz , Faheem Khan

Background

Infectious diseases like COVID-19 pose major global health threats. Robust surveillance systems are needed to swiftly detect and contain outbreaks. This study investigates the integration of Blockchain technology and machine learning to establish a secure and ethically sound approach to tracking infectious diseases.

Methods

We established a Blockchain-based framework for the collection and analysis of epidemiological data while upholding privacy standards. We employed encryption and privacy-enhancing technologies to gather information on case numbers, locations, and disease progression. Artificial neural networks were employed to scrutinize the data and pinpoint transmission patterns. A prototype was specifically designed to work with COVID-19 data from specific countries.

Results

The Blockchain system enabled reliable and tamper-proof data gathering with enhanced transparency. The evaluation showed it allowed cost-effective tracking of infectious diseases while upholding confidentiality safeguards. The neural networks effectively modeled disease spread based on the Blockchain data.

Conclusions

This research demonstrates the viability of Blockchain and machine learning for infectious disease surveillance. The system strikes a balance between public health concerns and personal privacy considerations. It also addresses the challenges of misinformation and accountability gaps during disease outbreaks. Ongoing development can lay the foundation for an ethical framework for digital disease tracking, ensuring both pandemic preparedness and response capabilities are upheld.

背景COVID-19 等传染病对全球健康构成重大威胁。需要强大的监控系统来迅速检测和遏制疾病的爆发。本研究调查了区块链技术与机器学习的整合,以建立一种安全且符合道德标准的方法来追踪传染病。方法我们建立了一个基于区块链的框架,用于收集和分析流行病学数据,同时维护隐私标准。我们采用加密和隐私增强技术来收集病例数量、地点和疾病进展等信息。我们采用人工神经网络来仔细检查数据并确定传播模式。区块链系统实现了可靠、防篡改的数据收集,并提高了透明度。评估结果表明,区块链系统能够以具有成本效益的方式追踪传染病,同时维护保密性。神经网络根据区块链数据有效地模拟了疾病传播。该系统在公共卫生问题和个人隐私考虑之间取得了平衡。它还解决了疾病爆发期间信息错误和责任缺失的难题。持续的开发可以为数字疾病追踪的伦理框架奠定基础,确保大流行病的防备和应对能力得到维护。
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引用次数: 0
Ultrasound Applications in Ophthalmology: A Review 超声波在眼科中的应用:综述
IF 4.8 4区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-02-12 DOI: 10.1016/j.irbm.2024.100828
Sylvain Poinard , Alice Ganeau , Maxime Lafond , Oliver Dorado , Stefan Catheline , Cyril Lafon , Florent Aptel , Gilles Thuret , Philippe Gain

Ultrasound is a powerful tool in ophthalmology with a wide range of physical effects that can interact with biological tissue. This ranges from low-intensity linear transducers for diagnosis to high-intensity pulsed or continuous focused ultrasound for therapy. Designing devices for ophthalmological applications requires creating fine focal spots, minimizing heating, and accounting for eye movements. Ultrasound is essential for ophthalmologists to provide accurate diagnosis and quantitative information on tissue composition and blood flow. Ultrasound has revolutionized cataract surgery, making it less invasive and in an outpatient basis, while enhancing the safety and predictability of glaucoma treatment using high-intensity focused ultrasound. The article aims to review the complex and multifaceted bioeffects of ultrasound used in ophthalmology, and its current and future applications of ultrasound in ophthalmology, notably regarding cavitation-mediated drug delivery.

在眼科领域,超声波是一种强大的工具,可与生物组织产生广泛的物理效应。从用于诊断的低强度线性换能器到用于治疗的高强度脉冲或连续聚焦超声波,不一而足。设计用于眼科的设备需要创建精细的聚焦点、最大限度地减少加热并考虑眼球运动。超声波对于眼科医生提供准确诊断以及组织成分和血流的定量信息至关重要。超声波为白内障手术带来了革命性的变化,使手术创伤更小,而且无需门诊,同时利用高强度聚焦超声波提高了青光眼治疗的安全性和可预测性。这篇文章旨在回顾超声波在眼科中应用的复杂和多方面的生物效应,以及超声波在眼科中的当前和未来应用,特别是空化介导的药物输送。
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引用次数: 0
Acknowledging our reviewers 感谢审稿人
IF 4.8 4区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-02-01 DOI: 10.1016/S1959-0318(24)00006-X
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引用次数: 0
Blockchain-Based Trusted Tracking Smart Sensing Network to Prevent the Spread of Infectious Diseases 基于区块链的可信追踪智能传感网络,防止传染病传播
IF 4.8 4区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-02-01 DOI: 10.1016/j.irbm.2024.100829
Riaz Ullah Khan, Rajesh Kumar, Amin Ul Haq, Inayat Khan, Muhammad Shabaz, Faheem Khan
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引用次数: 0
Stylohyoid and Posterior Digastric Recruitment Pattern Evaluation in Swallowing and Non-swallowing Tasks 对吞咽和非吞咽任务中的胸锁乳突和后鱼际肌募集模式进行评估。
IF 4.8 4区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-02-01 DOI: 10.1016/j.irbm.2024.100823
Adrien Mialland , Ihab Atallah , Agnès Bonvilain

Objectives

Electromyography is one of the few measurement methods that can be implanted, and it has been used in swallowing detection to measure superficial muscles, but has failed to provide satisfactory performances for a real-time detection. Yet, we seek to allow for the feasibility of an implantable active artificial larynx that would protect the airway during swallowing. Therefore, it requires a real-time detection of swallowing through measurements that must provide dedicated and early activity on swallowing, to close the airways soon as possible. In that regard, promising results were published about the stylohyoid and posterior digastric muscles, but no study provided simultaneous and independent measurements. So, this paper aims to evaluate both muscles with intra muscular EMG, in a large set of tasks, to evaluate their recruitment pattern for the feasibility of an implantable active artificial larynx.

Materials and methods

we used intramuscular EMG to measure the stylohyoid and the posterior digastric muscles independently. We also used surface electrodes to measure the submental muscles and provide a basis for comparison. Besides, the swallowing sound measurement method was used to locate the moment the bolus starts to enter the upper esophageal sphincter (UES). That moment defines a temporal limit after which the airway are in danger of aspiration and the temporal evolution of the muscles' is evaluated in comparison to that limit. The onsets and offsets of each muscles were located with a generalized likelihood ratio method, and the UES bolus passage was localized manually after the transformation of the signals with a Teager-Kaiser energy operator. 17 participants were measured, and were asked to perform 4 swallowing tasks and 13 non-swallowing tasks.

Results

we found a strong implication of the stylohyoid for swallowing and mastication. The posterior digastric showed a clear tendency towards swallow-related tasks, and especially swallowing, mastication, open mouth, jaw, and clench teeth. Both muscles provided significant activity before the temporal limit, with a characteristic pattern.

Conclusion

the stylohyoid and the posterior digastric muscles shows a net increase in potential for a detection, compared to the submental muscles, for the feasibility of an implantable active artificial larynx.

目的肌电图是为数不多的可植入式测量方法之一,它已被用于吞咽检测中的浅表肌肉测量,但未能为实时检测提供令人满意的性能。然而,我们试图实现植入式主动人工喉的可行性,以便在吞咽过程中保护气道。因此,需要通过测量对吞咽进行实时检测,必须在吞咽时提供专门的早期活动,以尽快关闭气道。在这方面,关于舌骨后肌和舌后肌的研究结果很有希望,但没有研究提供同时和独立的测量。因此,本文旨在通过肌内肌电图在大量任务中对这两块肌肉进行评估,以评估它们的招募模式,从而确定植入式主动人工喉的可行性。我们还使用表面电极测量了下颌肌,为比较提供了依据。此外,我们还使用了吞咽声测量方法来确定栓剂开始进入食管上括约肌(UES)的时刻。该时刻定义了一个时间界限,在该界限之后,气道将面临吸入的危险,而肌肉的时间演变则与该界限进行比较评估。使用广义似然比法定位每块肌肉的起始点和终止点,并使用 Teager-Kaiser 能量算子对信号进行转换后手动定位上咽部栓塞通道。我们对 17 名参与者进行了测量,要求他们完成 4 项吞咽任务和 13 项非吞咽任务。舌后肌明显倾向于与吞咽有关的任务,尤其是吞咽、咀嚼、张口、下颌和咬牙。这两块肌肉在颞叶界限之前都有明显的活动,并具有特定的模式。结论与下颌肌肉相比,舌骨后肌和舌骨后肌显示出检测潜力的净增长,这对植入式主动人工喉的可行性具有重要意义。
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引用次数: 0
Stylohyoid and posterior digastric recruitment pattern evaluation in swallowing and non-swallowing tasks. 对吞咽和非吞咽任务中的胸锁乳突和后鱼际肌募集模式进行评估。
IF 4.8 4区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-02-01 DOI: 10.1016/j.irbm.2024.100823
A. Mialland, Ihab Atallah, Agnès Bonvilain
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引用次数: 0
Improved Estimation of Elbow Flexion Angle from IMU Measurements Using Anatomical Constraints 利用解剖学约束条件,通过 IMU 测量改进肘关节弯曲角度的估算
IF 4.8 4区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-02-01 DOI: 10.1016/j.irbm.2024.100820
Anna Bicchi, Alessandro Colombo

Objectives

Inertial Measurement Units (IMUs) are a valid alternative to optical tracking systems for human motion capture, but they are subject to several disturbances that limit their accuracy. We aim to improve the accuracy of elbow joint angle estimation from IMU measurements by introducing a novel postprocessing algorithm that uses anatomical constraints and does not require any prior calibration or knowledge of anthropometric parameters.

Materials and Methods

We propose a new error model that addresses sensor misalignment and fusion errors. We use an error state extended Kalman filter (ESEKF) with state constraints to integrate the anatomical constraints. We validate the proposed algorithm by testing it in different scenarios and comparing it with a state-of-the-art optical tracking system.

Results

The research results highlight the superior performance of the proposed method compared with existing techniques. The study demonstrates a significant reduction in errors, particularly in complex arm movements and under strong external disturbances. The results obtained in the three different tested scenarios underscore the robustness and effectiveness of the developed algorithm, reaching half the error committed by the existing calibration-free correction algorithms proposed in the literature.

Conclusions

The developed technique provides highly accurate estimates of joint angles in several challenging real-world scenarios.

目标 惯性测量单元(IMU)是光学跟踪系统的有效替代品,可用于人体运动捕捉,但它们会受到一些干扰,从而限制了其准确性。我们的目标是通过引入一种新的后处理算法来提高根据 IMU 测量结果估算肘关节角度的准确性,该算法使用解剖学约束,不需要任何事先校准或人体测量参数知识。我们使用带有状态约束的误差状态扩展卡尔曼滤波器(ESEKF)来整合解剖约束。我们通过在不同场景中进行测试,并与最先进的光学跟踪系统进行比较,验证了所提出的算法。研究表明,特别是在复杂的手臂运动和强烈的外部干扰下,误差明显减少。在三种不同的测试场景中获得的结果凸显了所开发算法的鲁棒性和有效性,其误差仅为文献中提出的现有免校准校正算法的一半。
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引用次数: 0
Ultrasound applications in ophthalmology: a review 超声波在眼科中的应用:综述
IF 4.8 4区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-02-01 DOI: 10.1016/j.irbm.2024.100828
S. Poinard, A. Ganeau, M. Lafond, Oliver Dorado, Stefan Catheline, C. Lafon, Florent Aptel, Gilles Thuret, P. Gain
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引用次数: 0
Comparing Two Bootstrapped Regions in Images: The D-Test 比较图像中的两个引导区域:D 测试
IF 4.8 4区 医学 Q1 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-02-01 DOI: 10.1016/j.irbm.2024.100821
Florentin Kucharczak , Inés Couso , Olivier Strauss , Denis Mariano-Goulart

Objectives

Many molecular imaging diagnoses involve comparing two regions of interest (ROIs) in the image or different images. Since the images are obtained by measuring a random phenomenon, such comparisons should be based on a statistical test to ensure reliability. Recent studies have shown that use of the bootstrap approach provides access to the statistical variability of reconstructed values in molecular images. However, although there is general agreement that this increase in information should make diagnosis based on molecular images more reliable, no approach has been proposed in the relevant literature to use bootstrap replicates to enhance the reliability of comparisons of two ROIs. In this paper, we propose to fill this gap by introducing the first statistical test that allows us to compare two sets of pixels/voxels for which bootstrap replicates are available.

Material and methods

After presenting the theoretical basis of this non-parametric statistical test, this article describes how to calculate it in practice. Finally, it proposes two experiments based on quantitative comparisons and expert judgment to assess its relevance.

Results

The results obtained are consistent with expert diagnosis on synthetic data. This validates the relevance of the D-test.

Conclusion

This paper presents the first statistical test to compare two ROIs in reconstructed images for which the statistical variability information is accessible.

目标许多分子成像诊断都需要比较图像或不同图像中的两个感兴趣区(ROI)。由于图像是通过测量随机现象获得的,因此这种比较应基于统计检验以确保可靠性。最近的研究表明,使用引导法可以获得分子图像中重建值的统计变异性。然而,尽管人们普遍认为这种信息的增加应使基于分子图像的诊断更加可靠,但相关文献中还没有提出使用引导复制法来提高两个 ROI 比较的可靠性。在本文中,我们建议通过引入第一个统计检验来填补这一空白,该检验允许我们对两组像素/体素进行比较,而这两组像素/体素都有引导复制。最后,文章提出了两个基于定量比较和专家判断的实验来评估其相关性。结果所获得的结果与合成数据的专家诊断结果一致。结论本文提出了第一个统计检验方法,用于比较重建图像中的两个 ROI(可获得统计变异性信息)。
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引用次数: 0
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Irbm
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