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A Nonlinear Analysis of Nociceptive Flexion Reflex Changes Before and After Acute Inflammation 急性炎症前后痛觉屈曲反射变化的非线性分析
IF 5.6 4区 医学 Q1 ENGINEERING, BIOMEDICAL Pub Date : 2024-09-02 DOI: 10.1016/j.irbm.2024.100858
Grant A. Chesbro , Jessica A. Peterson , Rebecca D. Larson , Christopher D. Black

Objectives: The nociceptive flexion reflex (NFR) is used as a pseudo-objective measure of pain that is measured using electromyography (EMG). EMG signals can be analyzed using nonlinear methods to identify complex changes in physiological systems. Physiological complexity has been shown to allow a wider range of adaptable states for the system to deal with stressors. The purpose of this study was to examine changes in complexity and entropy of EMG signals from the biceps femoris during non-noxious stimuli and noxious stimuli that evoked the NFR before and after acute inflammation. Methods and Materials: Twelve healthy participants (25.17y ± 3.43) underwent the NFR protocol. EMG signal complexity was calculated using Hurst Exponent (H), determinism (DET), and recurrence rate (RR), and Sample Entropy (SampEn). Results: RR (∼200%), DET (∼70%), and H (∼35%) were higher and SampEn was reduced (∼50%) during the noxious stimulus that evoked the NFR compared to non-noxious stimuli. No significant differences were found for any of the complexity and entropy measures before and after exercise-induced inflammation (p<0.05). Reduced complexity (increased H, DET, and RR) and increased regularity (SampEn) reflect reduced adaptability to stressors. Conclusions: Nonlinear methods such as complexity and entropy measures could be useful in understanding how a healthy neuromuscular system responds to disturbances. The reductions in complexity following a noxious stimulus could reflect the neuromuscular system adapting to environmental conditions to prevent damage or injury to the body.

目的:痛觉屈曲反射(NFR)是利用肌电图(EMG)测量疼痛的一种伪客观测量方法。肌电图信号可通过非线性方法进行分析,以确定生理系统的复杂变化。生理复杂性已被证明允许系统有更广泛的适应状态来应对压力。本研究的目的是研究股二头肌在急性炎症前后受到非毒性刺激和毒性刺激时,诱发 NFR 的 EMG 信号的复杂性和熵的变化。方法和材料:12 名健康参与者(25.17 岁 ± 3.43)接受了 NFR 方案。使用赫斯特指数(H)、确定性(DET)、复发率(RR)和样本熵(SampEn)计算肌电信号复杂性。结果如下与非毒性刺激相比,在诱发 NFR 的毒性刺激中,RR(∼200%)、DET(∼70%)和 H(∼35%)更高,SampEn 降低(∼50%)。在运动诱发炎症前后,复杂性和熵的测量结果均无明显差异(p<0.05)。复杂性降低(H、DET 和 RR 增加)和规则性增加(SampEn)反映了对压力的适应性降低。结论复杂性和熵测量等非线性方法有助于了解健康的神经肌肉系统如何应对干扰。神经肌肉系统在受到有害刺激后复杂性降低,这可能反映出神经肌肉系统正在适应环境条件,以防止身体受损或受伤。
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引用次数: 0
Predicting the Shape of Corneas from Clinical Data with Machine Learning Models 利用机器学习模型从临床数据中预测角膜形状
IF 5.6 4区 医学 Q1 ENGINEERING, BIOMEDICAL Pub Date : 2024-08-21 DOI: 10.1016/j.irbm.2024.100853
Hala Bouazizi , Isabelle Brunette , Jean Meunier

Objective

In ophthalmology, there is a need to explore the relationships between clinical parameters of the cornea and the corneal shape. This study explores the paradigm of machine learning with nonlinear regression methods to verify whether corneal shapes can effectively be predicted from clinical data only, in an attempt to better assess and visualize their effects on the corneal shape.

Methods

The dimensionality of a database of normal anterior corneal surfaces was first reduced by Zernike modeling into short vectors of 12 to 20 coefficients used as targets. The associated structural, refractive and demographic corneal parameters were used as predictors. The nonlinear regression methods were borrowed from the scikit-learn library. All possible regression models (method + predictors + targets) were pre-tested in an exploratory step and those that performed better than linear regression were fully tested with 10-fold validation. The best model was selected based on mean RMSE scores measuring the distance between the predicted corneal surfaces of a model and the raw (non-modeled) true surfaces. The quality of the best model's predictions was visually assessed thanks to atlases of average elevation maps that displayed the centroids of the predicted and true surfaces on a number of clinical variables.

Results

The best model identified was gradient boosting regression using all available clinical parameters to predict 16 Zernike coefficients. The predicted and true corneal surfaces represented in average elevation maps were remarkably similar. The most explicative predictor was the radius of the best-fit sphere, and departures from that sphere were mostly explained by the eye side and by refractive parameters (axis and cylinder).

Conclusion

It is possible to make a reasonably good prediction of the normal corneal shape solely from a set of clinical parameters. In so doing, one can visualize their effects on the corneal shape and identify its most important contributors.

目的在眼科领域,需要探索角膜临床参数与角膜形状之间的关系。本研究利用非线性回归方法探索机器学习的范例,以验证是否能仅根据临床数据有效预测角膜形状,从而更好地评估和直观显示临床数据对角膜形状的影响。方法首先通过 Zernike 建模将正常角膜前表面数据库的维度降低为 12 到 20 个系数的短向量作为目标。相关的结构、屈光和人口统计学角膜参数被用作预测因子。非线性回归方法借用了 scikit-learn 库。在探索步骤中对所有可能的回归模型(方法 + 预测因子 + 目标)进行了预先测试,并对性能优于线性回归的模型进行了 10 倍验证的全面测试。根据测量模型预测角膜表面与原始(非建模)真实表面之间距离的平均 RMSE 分数,选出最佳模型。最佳模型的预测质量可通过平均高程图来直观评估,平均高程图显示了预测角膜表面和真实角膜表面在一些临床变量上的中心点。平均高程图所代表的预测角膜表面和真实角膜表面非常相似。最能说明问题的预测因子是最佳拟合球面的半径,而偏离该球面的情况主要由眼侧和屈光参数(轴和圆柱)来解释。通过这种方法,我们可以直观地看到这些参数对角膜形状的影响,并找出最重要的影响因素。
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引用次数: 0
AI-Enabled Clinical Decision Support System Modeling for the Prediction of Cirrhosis Complications 用于肝硬化并发症预测的人工智能临床决策支持系统建模
IF 5.6 4区 医学 Q1 ENGINEERING, BIOMEDICAL Pub Date : 2024-08-20 DOI: 10.1016/j.irbm.2024.100854
Vivian Chia-Rong Hsieh, Meng-Yu Liu, Hsueh-Chun Lin

Background and Objective

Utilizing artificial intelligence (AI), a clinical decision support system (CDSS), can help physicians anticipate possible complications of cirrhosis patients before prescribing more accurate treatments. This study aimed to establish a prototype of AI-CDSS modeling using electronic health records to predict five complications for cirrhosis patients who were controlled for oral antiviral drugs, lamivudine (LAM) or entecavir (ETV).

Methods

Our modeling attained a web-based AI-CDSS with four steps – data extraction, sample normalization, AI-enabled machine learning (ML), and system integration. We designed the extract-transform-load (ETL) procedure to filter the analytics features from a clinical database. The data training process applied 10-fold cross-validation to verify diverse ML models due to possible feature patterns with medications for predicting the complications. In addition, we applied both statistical means and standard deviations of the realistic datasets to create the simulative datasets, which contained sufficient and balanced data to train the most efficient models for evaluation. The modeling combined multiple ML methods, such as support vector machine (SVM), random forest (RF), extreme gradient boosting, naive Bayes, and logistic regression, for training fourteen features to generate the AI-CDSS's prediction functionality.

Results

The models achieving an accuracy of 0.8 after cross-validations would be qualified for the AI-CDSS. SVM and RF models using realistic data predicted jaundice with an accuracy of over 0.82. Furthermore, the SVM models using simulative data reached an accuracy of over 0.85 when predicting patients with jaundice. Our approaches implied that the simulative datasets based on the same distributions as that of the features in the realistic dataset were adequate for training the ML models. The RF model could reach an AUC of up to 0.82 for multiple complications by testing with the un-trained data. Finally, we successfully installed twenty models of the suitable ML methods in the AI-CDSS to predict five complications for cirrhosis patients prescribed with LAM or ETV.

Conclusions

Our modeling integrated a self-developed AI-CDSS with the approved ML models to predict cirrhosis complications for aiding clinical decision making.

背景和目的利用人工智能(AI)--临床决策支持系统(CDSS),可以帮助医生在开出更准确的治疗处方之前预测肝硬化患者可能出现的并发症。本研究旨在利用电子健康记录建立人工智能-CDSS建模原型,以预测接受口服抗病毒药物拉米夫定(LAM)或恩替卡韦(ETV)治疗的肝硬化患者的五种并发症。方法我们的建模实现了基于网络的人工智能-CDSS,包括四个步骤--数据提取、样本规范化、人工智能机器学习(ML)和系统集成。我们设计了提取-转换-加载(ETL)程序,从临床数据库中筛选分析特征。在数据训练过程中,我们采用了 10 倍交叉验证,以验证因可能的特征模式而产生的多种 ML 模型,这些特征模式与预测并发症的药物有关。此外,我们还采用了现实数据集的统计均值和标准差来创建模拟数据集,其中包含足够且均衡的数据,以训练最有效的评估模型。建模结合了多种 ML 方法,如支持向量机 (SVM)、随机森林 (RF)、极梯度提升、天真贝叶斯和逻辑回归,用于训练 14 个特征,以生成 AI-CDSS 的预测功能。使用现实数据的 SVM 和 RF 模型预测黄疸的准确率超过了 0.82。此外,使用模拟数据的 SVM 模型预测黄疸患者的准确率超过了 0.85。我们的方法表明,基于与现实数据集特征相同分布的模拟数据集足以训练 ML 模型。通过使用未训练数据进行测试,射频模型对多种并发症的 AUC 可高达 0.82。最后,我们成功地在 AI-CDSS 中安装了 20 个合适的 ML 方法模型,用于预测肝硬化患者服用 LAM 或 ETV 后的五种并发症。
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引用次数: 0
Synchronized Diabetes Monitoring System: Development of Smart Mobile Apparatus for Diabetes Using Insulin 同步糖尿病监测系统:开发使用胰岛素的糖尿病智能移动设备
IF 5.6 4区 医学 Q1 ENGINEERING, BIOMEDICAL Pub Date : 2024-08-02 DOI: 10.1016/j.irbm.2024.100852
Mustafa Kahraman , Hatice Vildan Dudukcu , Serkan Kurt , Huseyin Yildiz , Nizamettin Aydin , Ummu Mutlu , Ramazan Cakmak , Elif Beyza Boz , Hasan Ediz Ozbek , Mehmet Ali Erturk , Gokhan Ozogur , Hatice Nizam Ozogur , Muhammed Ali Aydin , Kubilay Karsidag , Sukru Ozturk , Ilhan Satman , Mehmet Akif Karan

Accurate and timely injection of insulin doses in accordance with the treatment protocol is very important in the follow-up of insulin-dependent diabetes patients. In this study, a new smart mobile apparatus (SMA) has been developed. The SMA can be attached to insulin pens and record and transfer data by detecting the patient's dose of insulin and the time at which it was provided. The SMA can detect the dose determined in the insulin pen through linear capacitive sensors. Electronic parts and sensor mechanism are located on the designed SMA body. The insulin pen's two-part mechanical construction of the body senses movement during dosage adjustment while also making sure the dose information is recorded in the control unit. The dose and time information recorded in the SMA internal memory are transmitted to the patient's smartphone via the developed mobile application. The developed SMA prototypes were evaluated by a team of doctors in a hospital setting for three months. As a result of the three-month study, it was observed that the insulin dose and administration times could be accurately sent to the smartphone application via SMA. The SMA was created in the laboratory environment and was prepared for pilot research with insulin-dependent diabetes patients in a hospital setting. It was observed that the SMA prototype successfully identified and recorded the dose and timing of the patient's self-administered insulin.

在胰岛素依赖型糖尿病患者的随访过程中,按照治疗方案准确及时地注射胰岛素剂量非常重要。本研究开发了一种新型智能移动设备(SMA)。SMA 可以安装在胰岛素笔上,通过检测病人的胰岛素剂量和注射时间来记录和传输数据。SMA 可通过线性电容传感器检测胰岛素笔中确定的剂量。电子部件和传感器机构位于设计的 SMA 本体上。胰岛素笔的笔身由两部分机械结构组成,可在调整剂量时感知移动,同时确保剂量信息被记录到控制单元中。记录在 SMA 内部存储器中的剂量和时间信息将通过开发的移动应用程序传输到患者的智能手机上。一个医生团队在医院环境中对所开发的 SMA 原型进行了为期三个月的评估。三个月的研究结果表明,胰岛素剂量和给药时间可通过 SMA 准确发送到智能手机应用程序。SMA 是在实验室环境中创建的,准备在医院环境中对胰岛素依赖型糖尿病患者进行试点研究。据观察,SMA 原型成功识别并记录了患者自行注射胰岛素的剂量和时间。
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引用次数: 0
Gaussianity Evaluation of HD-sEMG Signals with Aging and Sex During Low and Moderate Isometric Contractions of the Biceps Brachii 肱二头肌低度和中度等长收缩时,HD-sEMG 信号随年龄和性别变化的高斯性评估
IF 5.6 4区 医学 Q1 ENGINEERING, BIOMEDICAL Pub Date : 2024-08-02 DOI: 10.1016/j.irbm.2024.100851
Kawtar Ghiatt , Auguste L.W. Koh , Léa Scapucciati , Kiyoka Kinugawa , John McPhee , Ning Jiang , Sofiane Boudaoud

Introduction

Aging is associated with muscle decline, which alters both functional and anatomical properties of the neuromuscular system. These modifications can be reflected in high-density surface electromyography (HD-sEMG) signals. This study examines how age and sex impact the shape of the amplitude Probability Density Function (PDF) of HD-sEMG signals.

Materials and Methods

Monopolar HD-sEMG signals were collected from the Biceps Brachii in a cohort of 17 individuals: 10 women (mean age: 22.9 ± 3.6 years) and 7 men (mean age: 24.4 ± 2.5 years) in the younger group, and 10 women (mean age: 69.8 ± 4.8 years) and 7 men (mean age: 72.8 ± 2.7 years) in the elderly group. The recordings were conducted during an elbow flexion at both 20% and 40% maximum voluntary contraction. The signal amplitude was evaluated using root means square amplitude (RMSA) and the PDF shape of each HD-sEMG signal was assessed through skewness, excess Kurtosis, and robust functional statistics. These shape distance metrics evaluate the departure from Gaussianity related to muscle aging. a) We conducted a comparison study of the HD-sEMG PDF shapes between younger and elderly individuals. b) Evaluating differences between men and women. c) Considering monopolar and Laplacian electrode configurations that are sensitive to different muscle regions.

Results

A) The HD-sEMG PDFs of elderly subjects demonstrated a lower departure from Gaussianity than their younger counterparts. B) Women exhibited lower RMSA values than men, and, on average, a lower departure from Gaussianity whatever the age and contraction level C) Trends of departure from Gaussianity with contraction level, seems to be influenced by the electrode configuration. In fact, a decrease in Gaussianity departure is observed with monopolar recordings where an increase is observed with Laplacian one, clearly indicating different muscle region assessment.

Discussion

The findings highlight the influence of factors such aging, sex, contraction level and electrode montage on the shape of the HD-sEMG PDF, emphasizing the significance of using this descriptor for monitoring and better assessment of muscle aging.

衰老与肌肉衰退有关,而肌肉衰退会改变神经肌肉系统的功能和解剖特性。这些变化可通过高密度表面肌电图(HD-sEMG)信号反映出来。本研究探讨了年龄和性别如何影响 HD-sEMG 信号振幅概率密度函数 (PDF) 的形状。研究人员从 17 人的肱二头肌采集了单极 HD-sEMG 信号:年轻组中有 10 名女性(平均年龄:22.9 ± 3.6 岁)和 7 名男性(平均年龄:24.4 ± 2.5 岁),老年组中有 10 名女性(平均年龄:69.8 ± 4.8 岁)和 7 名男性(平均年龄:72.8 ± 2.7 岁)。记录是在最大自主收缩 20% 和 40% 时屈肘进行的。信号振幅采用均方根振幅(RMSA)进行评估,每个 HD-sEMG 信号的 PDF 形状则通过偏度、过度峰度和稳健功能统计进行评估。a) 我们对年轻人和老年人的 HD-sEMG PDF 形状进行了比较研究;b) 评估了男性和女性之间的差异;c) 考虑了对不同肌肉区域敏感的单极和拉普拉斯电极配置。A) 与年轻人相比,老年人的 HD-sEMG PDF 偏离高斯性更低。B) 女性的 RMSA 值低于男性,而且无论年龄和收缩水平如何,平均偏离高斯程度都较低 C) 偏离高斯程度随收缩水平的变化趋势似乎受到电极配置的影响。事实上,单极记录的高斯偏离度降低,而拉普拉斯记录的高斯偏离度升高,这清楚地表明对肌肉区域的评估不同。研究结果凸显了年龄、性别、收缩水平和电极蒙太奇等因素对 HD-sEMG PDF 形状的影响,强调了使用该描述符监测和更好地评估肌肉老化的重要性。
{"title":"Gaussianity Evaluation of HD-sEMG Signals with Aging and Sex During Low and Moderate Isometric Contractions of the Biceps Brachii","authors":"Kawtar Ghiatt ,&nbsp;Auguste L.W. Koh ,&nbsp;Léa Scapucciati ,&nbsp;Kiyoka Kinugawa ,&nbsp;John McPhee ,&nbsp;Ning Jiang ,&nbsp;Sofiane Boudaoud","doi":"10.1016/j.irbm.2024.100851","DOIUrl":"10.1016/j.irbm.2024.100851","url":null,"abstract":"<div><h3>Introduction</h3><p>Aging is associated with muscle decline, which alters both functional and anatomical properties of the neuromuscular system. These modifications can be reflected in high-density surface electromyography (HD-sEMG) signals. This study examines how age and sex impact the shape of the amplitude Probability Density Function (PDF) of HD-sEMG signals.</p></div><div><h3>Materials and Methods</h3><p>Monopolar HD-sEMG signals were collected from the Biceps Brachii in a cohort of 17 individuals: 10 women (mean age: 22.9 ± 3.6 years) and 7 men (mean age: 24.4 ± 2.5 years) in the younger group, and 10 women (mean age: 69.8 ± 4.8 years) and 7 men (mean age: 72.8 ± 2.7 years) in the elderly group. The recordings were conducted during an elbow flexion at both 20% and 40% maximum voluntary contraction. The signal amplitude was evaluated using root means square amplitude (RMSA) and the PDF shape of each HD-sEMG signal was assessed through skewness, excess Kurtosis, and robust functional statistics. These shape distance metrics evaluate the departure from Gaussianity related to muscle aging. a) We conducted a comparison study of the HD-sEMG PDF shapes between younger and elderly individuals. b) Evaluating differences between men and women. c) Considering monopolar and Laplacian electrode configurations that are sensitive to different muscle regions.</p></div><div><h3>Results</h3><p>A) The HD-sEMG PDFs of elderly subjects demonstrated a lower departure from Gaussianity than their younger counterparts. B) Women exhibited lower RMSA values than men, and, on average, a lower departure from Gaussianity whatever the age and contraction level C) Trends of departure from Gaussianity with contraction level, seems to be influenced by the electrode configuration. In fact, a decrease in Gaussianity departure is observed with monopolar recordings where an increase is observed with Laplacian one, clearly indicating different muscle region assessment.</p></div><div><h3>Discussion</h3><p>The findings highlight the influence of factors such aging, sex, contraction level and electrode montage on the shape of the HD-sEMG PDF, emphasizing the significance of using this descriptor for monitoring and better assessment of muscle aging.</p></div>","PeriodicalId":14605,"journal":{"name":"Irbm","volume":"45 5","pages":"Article 100851"},"PeriodicalIF":5.6,"publicationDate":"2024-08-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141936082","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Attention-Based Neural Network for Cardiac MRI Segmentation: Application to Strain and Volume Computation 基于注意力的心脏磁共振成像分割神经网络:应用于应变和体积计算
IF 5.6 4区 医学 Q1 ENGINEERING, BIOMEDICAL Pub Date : 2024-08-01 DOI: 10.1016/j.irbm.2024.100850
Nicolas Portal , Catherine Achard , Saud Khan , Vincent Nguyen , Mikael Prigent , Mohamed Zarai , Khaoula Bouazizi , Johanne Sylvain , Alban Redheuil , Gilles Montalescot , Nadjia Kachenoura , Thomas Dietenbeck

Context

Deep learning algorithms have been widely used for cardiac image segmentation. However, most of these architectures rely on convolutions that hardly model long-range dependencies, limiting their ability to extract contextual information. Moreover, the traditional U-net architecture suffers from the difference of semantic information between feature maps of the encoder and decoder (also known as the semantic gap).

Material and method

To address this issue, a new network architecture relying on attention mechanism was introduced. Swin Filtering Blocks (SFB), that use Swin Transformer blocks in a cross-attention manner, were added between the encoder and the decoder to filter information coming from the encoder based on the feature map from the decoder. Attention was also employed at the lowest resolution in the form of a transformer layer to increase the receptive field of the network.

We conducted experiments to assess both generalization capability and to evaluate how training on all frames of the cardiac cycle rather than only the end-diastole and end-systole impacts strain and segmentation performances.

Results and conclusion

Visual inspection of feature maps suggested that Swin Filtering Blocks contribute to the reduction of the semantic gap. Performing attention between all patches using a transformer layer brought higher performance than convolutions. Training the model with all phases of the cardiac cycle resulted in slightly more accurate segmentations while leading to a more noticeable improvement for strain estimation. A limited decrease in performance was observed when testing on out-of-distribution data, but the gap widens for the most apical slices.

深度学习算法已被广泛用于心脏图像分割。然而,这些架构大多依赖于卷积,难以建立长程依赖关系模型,从而限制了其提取上下文信息的能力。此外,传统的 U-net 架构还存在编码器和解码器特征图之间的语义信息差异(也称为语义差距)。为了解决这个问题,我们引入了一种依赖于注意力机制的新型网络架构。在编码器和解码器之间添加了以交叉注意方式使用 Swin 变换器块的 Swin 过滤块(SFB),以根据解码器的特征图过滤来自编码器的信息。此外,还以变压器层的形式在最低分辨率下使用了注意力,以增加网络的感受野。对特征图的目测表明,斯温过滤块有助于缩小语义差距。与卷积法相比,使用变换层对所有斑块进行关注能带来更高的性能。用心动周期的所有阶段来训练模型,可使分割的准确性略有提高,同时在应变估计方面也有更明显的改进。在对分布外数据进行测试时,观察到的性能下降有限,但在最顶端切片上的差距有所扩大。
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引用次数: 0
Transition Network-Based Analysis of Electrodermal Activity Signals for Emotion Recognition 基于过渡网络的情感识别皮电活动信号分析
IF 5.6 4区 医学 Q1 ENGINEERING, BIOMEDICAL Pub Date : 2024-08-01 DOI: 10.1016/j.irbm.2024.100849
Yedukondala Rao Veeranki , Hugo F. Posada-Quintero , Ramakrishnan Swaminathan

Background

Emotion assessment plays a vital role in understanding and enhancing various aspects of human life, from mental well-being and social interactions to decision-making processes. Electrodermal Activity (EDA) is widely used for emotion assessment, as it is highly sensitive to sympathetic nervous system activity. While numerous existing approaches are available for EDA-based emotion assessment, they often fall short in capturing the dynamic non-linear variations and time-varying characteristics of EDA. These limitations hinder their effectiveness in accurately classifying emotional states along the Arousal and Valence dimensions. This study aims to address these shortcomings by introducing Transition Network Analysis (TNA) as a novel approach to EDA-based emotion assessment.

Methods

To explore the dynamic non-linear variations in EDA and their impact on the classification of Arousal and Valence dimensions, we decomposed EDA data into its phasic and tonic components. The phasic information is represented over a transition network. From the transition network, we extracted seven features. These features were subsequently used for classification purposes employing four different machine learning classifiers: logistic regression, multi-layer perceptron, random forest, and support vector machine (SVM). The performance of each classifier was evaluated using Leave-One-Subject-Out cross-validation. The study evaluated the performance of these classifiers in characterizing emotional dimensions.

Results

The results of this research reveal significant variations in Degree Centrality and Closeness Centrality within the transition network features, enabling effective characterization of Arousal and Valence dimensions. Among the classifiers, the SVM achieved F1 scores of 71% and 72% for Arousal and Valence classification, respectively.

Significance

This study holds significant implications as it not only enhances our understanding of EDA's non-linear dynamics but also demonstrates the potential of TNA in addressing the limitations of existing techniques for EDA-based emotion assessment. The findings open exciting opportunities for the advancement of wearable EDA monitoring devices in naturalistic settings, bridging a critical gap in the field of affective computing. Furthermore, this research underlines the importance of recognizing the limitations in current EDA-based emotion assessment methods and suggests an innovative path forward in the pursuit of more accurate and comprehensive emotional state classification.

情绪评估在了解和提高人类生活的各个方面(从心理健康、社会交往到决策过程)方面发挥着至关重要的作用。皮电活动(EDA)对交感神经系统活动高度敏感,因此被广泛用于情绪评估。虽然现有许多基于 EDA 的情绪评估方法,但它们往往无法捕捉 EDA 的动态非线性变化和时变特征。这些局限性阻碍了它们根据 "唤醒"(Arousal)和 "情绪"(Valence)维度对情绪状态进行准确分类的有效性。本研究旨在通过引入过渡网络分析(TNA)作为基于 EDA 的情绪评估的新方法来解决这些不足。为了探索 EDA 中的动态非线性变化及其对 "唤醒 "和 "情感 "维度分类的影响,我们将 EDA 数据分解为相位和强直成分。相位信息通过过渡网络来表示。我们从过渡网络中提取了七个特征。这些特征随后被用于使用四种不同的机器学习分类器进行分类:逻辑回归、多层感知器、随机森林和支持向量机(SVM)。每种分类器的性能都是通过 "留空-主体-淘汰 "交叉验证进行评估的。研究评估了这些分类器在表征情感维度方面的性能。研究结果表明,在过渡网络特征中,度中心性(Degree Centrality)和接近中心性(Closeness Centrality)存在显著差异,能够有效描述 "唤醒"(Arousal)和 "情绪"(Valence)维度。在分类器中,SVM 在 "唤醒 "和 "情感 "分类方面的 F1 分数分别达到了 71% 和 72%。这项研究具有重要意义,因为它不仅加深了我们对 EDA 非线性动态的理解,还展示了 TNA 在解决基于 EDA 的情绪评估现有技术的局限性方面的潜力。研究结果为在自然环境中开发可穿戴的情感发展监测设备提供了令人兴奋的机遇,弥补了情感计算领域的一个重要空白。此外,这项研究还强调了认识到当前基于 EDA 的情绪评估方法的局限性的重要性,并为追求更准确、更全面的情绪状态分类提出了一条创新之路。
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引用次数: 0
Influence of Image Factors on the Performance of Ophthalmic Ultrasound Deep Learning Model 图像因素对眼科超声深度学习模型性能的影响
IF 5.6 4区 医学 Q1 ENGINEERING, BIOMEDICAL Pub Date : 2024-07-08 DOI: 10.1016/j.irbm.2024.100848
Zemeng Li , Xiaochun Wang , Shuyang Wang , You Zhou , Xinqi Yu , Jianjun Ji , Jun Yang , Song Lin , Sheng Zhou

Objective

This study aims to evaluate the impact of image factors on the performance of deep learning models used for ophthalmic ultrasound image diagnosis.

Methods

A total of 3,373 ophthalmic ultrasound images are used to deeply evaluate the influence of image factors on the performance of deep learning classification models. Inceptionv3, Xception, and the fusion model Inceptionv3-Xception are used to explore how brightness, contrast, gain, noise, size, format, pseudo-color seven image-related factors affect the classification performance of the model.

Results

Inceptionv3-Xception has advantages in the recognition accuracy of various image factors. When the image brightness changes, the model's performance shows a downward trend (0.5 vs. 1 vs. 1.8, ACC 95.73 vs. 97.06 vs. 93.54, P < 0.05). When the image contrast changes, the model's performance is comparable (0.5 vs. 1 vs. 1.2, ACC 96.23 vs. 96.95 vs. 97.45, P > 0.05). When the image gain drops to 50 dB, the model's accuracy decreases significantly (50 dB vs. 105 dB, ACC 96.49 vs. 97.57, P < 0.05). When Gaussian noise is added to the image, the model's performance gradually decreases (0.02 vs. 0, ACC 89.48vs97.06, P < 0.05). When the image size drops to 25% of the original image, the model's performance decreases significantly (25% vs. 100%, ACC 93.18 vs. 97.06, P < 0.01). When the image format changes, the model's recognition accuracy is similar (JPG vs. BMP vs. PNG, ACC 96.98 vs. 97.06 vs. 97.06, P > 0.05). The accuracy of the model in recognizing pseudo-color images decreases significantly compared to grayscale images (grayscale vs. pseudo-color, ACC 35.96 vs. 97.06).

Conclusion

These results indicate that image quality greatly influences the model training process, and acquiring high-quality images is an important prerequisite for high recognition performance of the model. This study offers valuable insights for the improvement of other robust deep learning models for ophthalmic ultrasound image recognition.

本研究旨在评估图像因素对用于眼科超声图像诊断的深度学习模型性能的影响。本研究共使用了 3,373 幅眼科超声图像,以深入评估图像因素对深度学习分类模型性能的影响。使用 Inceptionv3、Xception 和融合模型 Inceptionv3-Xception 探索亮度、对比度、增益、噪声、大小、格式、伪彩色七个图像相关因素如何影响模型的分类性能。Inceptionv3-Xception 在各种图像因素的识别准确率方面具有优势。当图像亮度发生变化时,模型的性能呈下降趋势(0.5 vs. 1 vs. 1.8, ACC 95.73 vs. 97.06 vs. 93.54, P < 0.05)。当图像对比度发生变化时,模型的性能相当(0.5 vs. 1 vs. 1.2,ACC 96.23 vs. 96.95 vs. 97.45,P > 0.05)。当图像增益下降到 50 dB 时,模型的准确性显著下降(50 dB vs. 105 dB, ACC 96.49 vs. 97.57, P < 0.05)。当图像中加入高斯噪声时,模型的性能逐渐下降(0.02 vs. 0, ACC 89.48vs97.06, P < 0.05)。当图像大小下降到原始图像的 25% 时,模型的性能显著下降(25% vs. 100%, ACC 93.18 vs. 97.06, P < 0.01)。当图像格式发生变化时,模型的识别准确率相似(JPG vs. BMP vs. PNG, ACC 96.98 vs. 97.06 vs. 97.06, P > 0.05)。与灰度图像相比,模型识别伪彩色图像的准确率明显下降(灰度 vs. 伪彩色,ACC 35.96 vs. 97.06)。这些结果表明,图像质量在很大程度上影响着模型的训练过程,而获取高质量的图像是模型获得高识别性能的重要前提。这项研究为改进眼科超声图像识别的其他鲁棒深度学习模型提供了宝贵的启示。
{"title":"Influence of Image Factors on the Performance of Ophthalmic Ultrasound Deep Learning Model","authors":"Zemeng Li ,&nbsp;Xiaochun Wang ,&nbsp;Shuyang Wang ,&nbsp;You Zhou ,&nbsp;Xinqi Yu ,&nbsp;Jianjun Ji ,&nbsp;Jun Yang ,&nbsp;Song Lin ,&nbsp;Sheng Zhou","doi":"10.1016/j.irbm.2024.100848","DOIUrl":"10.1016/j.irbm.2024.100848","url":null,"abstract":"<div><h3>Objective</h3><p>This study aims to evaluate the impact of image factors on the performance of deep learning models used for ophthalmic ultrasound image diagnosis.</p></div><div><h3>Methods</h3><p>A total of 3,373 ophthalmic ultrasound images are used to deeply evaluate the influence of image factors on the performance of deep learning classification models. Inceptionv3, Xception, and the fusion model Inceptionv3-Xception are used to explore how brightness, contrast, gain, noise, size, format, pseudo-color seven image-related factors affect the classification performance of the model.</p></div><div><h3>Results</h3><p>Inceptionv3-Xception has advantages in the recognition accuracy of various image factors. When the image brightness changes, the model's performance shows a downward trend (0.5 vs. 1 vs. 1.8, ACC 95.73 vs. 97.06 vs. 93.54, P &lt; 0.05). When the image contrast changes, the model's performance is comparable (0.5 vs. 1 vs. 1.2, ACC 96.23 vs. 96.95 vs. 97.45, P &gt; 0.05). When the image gain drops to 50 dB, the model's accuracy decreases significantly (50 dB vs. 105 dB, ACC 96.49 vs. 97.57, P &lt; 0.05). When Gaussian noise is added to the image, the model's performance gradually decreases (0.02 vs. 0, ACC 89.48vs97.06, P &lt; 0.05). When the image size drops to 25% of the original image, the model's performance decreases significantly (25% vs. 100%, ACC 93.18 vs. 97.06, P &lt; 0.01). When the image format changes, the model's recognition accuracy is similar (JPG vs. BMP vs. PNG, ACC 96.98 vs. 97.06 vs. 97.06, P &gt; 0.05). The accuracy of the model in recognizing pseudo-color images decreases significantly compared to grayscale images (grayscale vs. pseudo-color, ACC 35.96 vs. 97.06).</p></div><div><h3>Conclusion</h3><p>These results indicate that image quality greatly influences the model training process, and acquiring high-quality images is an important prerequisite for high recognition performance of the model. This study offers valuable insights for the improvement of other robust deep learning models for ophthalmic ultrasound image recognition.</p></div>","PeriodicalId":14605,"journal":{"name":"Irbm","volume":"45 4","pages":"Article 100848"},"PeriodicalIF":5.6,"publicationDate":"2024-07-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1959031824000290/pdfft?md5=d2db3fd118a09a6347da8a8332f055bd&pid=1-s2.0-S1959031824000290-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141609818","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Subject-Specific Probability Maps of Scalp, Skull and Cerebrospinal Fluid for Cranial Bones Segmentation in Neonatal Cerebral MRIs 用于新生儿脑磁共振成像中颅骨分割的头皮、头骨和脑脊液的特定受试者概率图
IF 5.6 4区 医学 Q1 ENGINEERING, BIOMEDICAL Pub Date : 2024-06-19 DOI: 10.1016/j.irbm.2024.100844

Objectives

Segmentation of cranial bones in magnetic resonance images (MRIs) is a challenging and indispensable task to study neonatal brain development and injury. This paper presents a new approach for creating subject-specific probability maps of the scalp, skull and cerebrospinal fluid (CSF) from retrospective bimodal (MR and CT) images acquired from neonates in the gestational age range of 39 to 42 weeks. These maps are subsequently employed for the segmentation of cranial bones in cerebral MRIs from neonates in the same age range.

Material and methods

Retrospective MR and CT of neonates with normal head in the gestational age range of 39-42 weeks were preprocessed, segmented semi-automatically and employed as atlas data. For an input MR image acquired from a subject under study, a preprocessing stage and three main processing blocks were performed: First, subject-specific head and intracranial templates and CSF probability map were created using retrospective MR atlas data. Second, the CT atlas data were coregistered to MR templates and the resulted deformation matrices were fed to the next block to create subject-specific scalp and skull probability maps. Finally, some novel performance measures were presented to evaluate the performance of subject-specific CSF, scalp and skull probability maps for skull and intracranial segmentation in neonatal MRIs.

Results

The subject-specific probability maps were employed for brain tissue extraction and compared with two public methods such as Brain Extraction Tool (BET) and Brain Surface Extractor (BSE). They were also applied for cranial bone extraction. Then, the similarity in shape between the frontal and occipital sutures (which had been reconstructed from segmented cranial bones) and the ground truth landmarks was evaluated. For this purpose, modified versions of the Dice similarity coefficient (DSC) were used. Finally, a retrospective bimodal (MR-CT) data acquired from a neonate within a short time interval was used for evaluation. After co-alignment of the two images, the DSC and modified Hausdorff distance (MHD) were used to compare the similarity of cranial bones in the MR and CT images.

Conclusion

Significant improvements were achieved compared to conventional methods which rely solely on MR image intensities. These advancements hold promise for enhancing neurodevelopmental studies in neonates. The algorithm for creating subject-specific atlases is publicly accessible through a graphical user interface at medvispy.ee.kntu.ac.ir.

磁共振成像(MRI)中的颅骨分割是研究新生儿大脑发育和损伤的一项具有挑战性且不可或缺的任务。本文介绍了一种新方法,即从孕龄在 39 到 42 周的新生儿的回顾性双模态(磁共振和 CT)图像中创建特定对象的头皮、头骨和脑脊液(CSF)概率图。这些图谱随后被用于对同一年龄段新生儿的脑磁共振成像中的颅骨进行分割。对孕龄在 39-42 周的头部正常的新生儿的回顾性 MR 和 CT 进行预处理、半自动分割并用作图集数据。对于从研究对象处获取的输入磁共振图像,要进行预处理阶段和三个主要处理模块:首先,利用回顾性 MR 图集数据创建特定受试者的头部和颅内模板以及 CSF 概率图。其次,将 CT 图集数据与 MR 模板进行核心注册,并将生成的变形矩阵输入下一个模块,以创建特定受试者的头皮和头骨概率图。最后,介绍了一些新的性能测量方法,以评估用于新生儿 MRI 头骨和颅内分割的特定受试者 CSF、头皮和头骨概率图的性能。特定受试者概率图被用于脑组织提取,并与脑提取工具(BET)和脑表面提取器(BSE)等两种公开方法进行了比较。它们还被用于颅骨提取。然后,对额骨缝和枕骨缝(根据分割的颅骨重建)与地面真实地标之间的形状相似性进行了评估。为此,使用了改进版的戴斯相似系数(DSC)。最后,还使用了一个新生儿在短时间内获得的回顾性双模态(MR-CT)数据进行评估。在对两幅图像进行共同对齐后,使用 DSC 和修正的豪斯多夫距离(MHD)来比较 MR 和 CT 图像中颅骨的相似性。与仅依赖 MR 图像强度的传统方法相比,该方法取得了显著的改进。这些进步为加强新生儿神经发育研究带来了希望。创建特定对象图集的算法可通过图形用户界面在.NET上公开获取。
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引用次数: 0
Automatic Classification Framework for Neonatal Seizure Using Wavelet Scattering Transform and Nearest Component Analysis 利用小波散射变换和最近分量分析对新生儿癫痫发作进行自动分类的框架
IF 5.6 4区 医学 Q1 ENGINEERING, BIOMEDICAL Pub Date : 2024-06-18 DOI: 10.1016/j.irbm.2024.100842
Vipin Prakash Yadav , Kamlesh Kumar Sharma

Introduction

Neonatal seizure is a common neurologic disorder in neonates. The diagnosis of a neonatal seizure can be made clinically or with an EEG. However, the clinical diagnosis of neonatal seizures is difficult, particularly in critically ill infants, because of the multitude of epileptic and nonepileptic clinical manifestations. On the other hand neonatal seizure can be effectively detected using EEG recordings. Hence, there is a need for an electroencephalograph (EEG) based automatic diagnosis framework for neonatal seizure.

Methods

This work proposed a wavelet scattering transform (WST) and histogram-based nearest component analysis (HBNCA) based framework for classifying seizures and non-seizure neonate's EEG signals. The WST converts EEG signals into its translation invariant and deformation stable representation. The HBNCA method is deployed to find the effective wavelet scattering coefficients (WSC) for classifying seizures and non-seizures EEG signals. Then, various classifiers are used to identify the effectiveness of the features.

Results

The proposed framework is managed to get an average accuracy of 98.59% and 97.83% for a 1-second duration of EEG signal for repeated random subsampling validation (RRSV) and leave one out cross-validation (LOOCV), respectively.

Conclusions

The results are compared with the other state of art methods. The accurate classification from the 1-second duration of the EEG signal shows the potential of the proposed framework for reliable neonatal seizure classification.

导言:新生儿惊厥是新生儿常见的神经系统疾病。新生儿癫痫发作可通过临床或脑电图诊断。然而,由于癫痫和非癫痫的临床表现多种多样,新生儿癫痫发作的临床诊断非常困难,尤其是重症婴儿。另一方面,新生儿癫痫发作可以通过脑电图记录有效地检测出来。本研究提出了一种基于小波散射变换(WST)和直方图最近分量分析(HBNCA)的新生儿癫痫发作和非癫痫发作脑电信号分类框架。波散射变换(WST)将脑电信号转换为平移不变和变形稳定的表示形式。利用 HBNCA 方法找到有效的小波散射系数(WSC),对癫痫发作和非癫痫发作脑电信号进行分类。结果在重复随机子采样验证(RRSV)和留空交叉验证(LOOCV)中,对于持续时间为 1 秒的脑电信号,所提出的框架分别获得了 98.59% 和 97.83% 的平均准确率。通过对持续时间为 1 秒的脑电信号进行准确分类,显示了所提出的框架在可靠的新生儿癫痫发作分类方面的潜力。
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引用次数: 0
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