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METTL3 mediates CPB1 expression by regulating transcription factor BACH2 to promote apoptosis and oxidative stress of lens epithelial cells. METTL3通过调节转录因子BACH2介导CPB1表达,促进晶状体上皮细胞凋亡和氧化应激。
IF 2.9 4区 生物学 Q2 BIOPHYSICS Pub Date : 2025-06-01 Epub Date: 2025-02-21 DOI: 10.1007/s10863-025-10054-1
Zhangxing Sheng, Yu Pan, Liqin Shao, Yihui Bao

Background: Cataracts are a significant cause of vision loss, adversely affecting the quality of human life. Numerous studies have reported that lens epithelial cells (LECs) play a crucial role in age-related cataract (ARC). However, the roles of carboxypeptidase B 1 (CPB1) and transcription factor BTB and CNC homologue 2 (BACH2) in the pathogenesis of ARC remain unclear. In this study, we aim to explore the contributions of CPB1 and BACH2 to the development of ARC.

Methods: The Gene Expression Omnibus (GEO) was utilized to screen for differentially expressed genes. mRNA and protein levels were assessed using quantitative reverse transcription polymerase chain reaction (qRT-PCR) and western blot analysis. Flow cytometry was conducted to analyze apoptosis. The levels of superoxide dismutase (SOD), glutathione peroxidase (GSH-PX), and malondialdehyde (MDA) were measured using a commercial kit. Dual-luciferase reporter assays and chromatin immunoprecipitation (CHIP) were performed to investigate the interaction between CPB1 and BACH2. The methylation site of BACH2 was analyzed using the RNA-protein binding sites prediction suite and the sequence-based RNA adenosine methylation site predictor suite. Methylated RNA immunoprecipitation (Me-RIP) was employed to detect m6A modification level of BACH2.

Results: In ARC and H2O2-induced human lens epithelial cells (HLECs), CPB1, BACH2, and METTL3 were found to be up-regulated. Silencing CPB1 reduced apoptosis and MDA levels while enhancing the activities of SOD and GSH-PX in H2O2-induced HLECs. Additionally, CPB1 was shown to bind to BACH2, and knockdown of BACH2 attenuated apoptosis and oxidative stress in H2O2-induced HLECs by targeting CPB1. Notably, METTL3 promoted the BACH2 expression by enhancing CPB1 expression in H2O2-induced HLECs. Finally, silencing METTL3 inhibited apoptosis and oxidative stress in H2O2-induced HLECs by hampering BACH2 expression.

Conclusions: METTL3 facilitates apoptosis and oxidative stress in H2O2-induced HLECs by promoting the modification of BACH2 and CPB1 expression.

背景:白内障是导致视力丧失的重要原因,对人类生活质量产生不利影响。大量研究报道晶状体上皮细胞(LECs)在年龄相关性白内障(ARC)中起着至关重要的作用。然而,羧基肽酶b1 (CPB1)、转录因子BTB和CNC同源物2 (BACH2)在ARC发病机制中的作用尚不清楚。在本研究中,我们旨在探讨CPB1和BACH2对ARC发展的贡献。方法:采用基因表达图谱(Gene Expression Omnibus, GEO)筛选差异表达基因。采用定量逆转录聚合酶链反应(qRT-PCR)和western blot方法检测mRNA和蛋白水平。流式细胞术检测细胞凋亡。超氧化物歧化酶(SOD)、谷胱甘肽过氧化物酶(GSH-PX)和丙二醛(MDA)水平采用商用试剂盒测定。采用双荧光素酶报告基因法和染色质免疫沉淀法(CHIP)研究CPB1和BACH2之间的相互作用。使用RNA-蛋白结合位点预测套件和基于序列的RNA腺苷甲基化位点预测套件分析BACH2的甲基化位点。采用甲基化RNA免疫沉淀(Me-RIP)检测BACH2的m6A修饰水平。结果:在ARC和h2o2诱导的人晶状体上皮细胞(HLECs)中,CPB1、BACH2和METTL3表达上调。沉默CPB1可降低h2o2诱导的HLECs细胞的凋亡和MDA水平,同时提高SOD和GSH-PX的活性。此外,CPB1被证明与BACH2结合,并且通过靶向CPB1,敲低BACH2可减轻h2o2诱导的HLECs的凋亡和氧化应激。值得注意的是,METTL3通过增强h2o2诱导的HLECs中CPB1的表达来促进BACH2的表达。最后,沉默METTL3通过抑制BACH2表达抑制h2o2诱导的HLECs细胞凋亡和氧化应激。结论:METTL3通过促进BACH2和CPB1表达的改变,促进h2o2诱导的HLECs细胞凋亡和氧化应激。
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引用次数: 0
Targeting hypoxia-induced HIF-1α/JMJD3/Notch axis in gastric cancer therapy. 靶向缺氧诱导的HIF-1α/JMJD3/Notch轴治疗胃癌。
IF 2.9 4区 生物学 Q2 BIOPHYSICS Pub Date : 2025-06-01 Epub Date: 2025-03-26 DOI: 10.1007/s10863-025-10057-y
Xin She, Lijun Geng, Qianwen Zhao, Haonan Guo, Guihong Rong, Yun Luo, Xia Li, Longkuan Xu, Fulin Ran, Shanshan Liu

Hypoxia has been reported to induce high expression of HIF-1α in multiple cancer tissues, and HIF-1α significantly influences cancer progression, including gastric cancer (GC). However, the mechanism of HIF-1α in the GC process is not clearly elucidated. HIF-1α and JMJD3 expressions in GC tissues were first determined by qRT-PCR and western blot. Meanwhile, the prognosis of HIF-1α, and the relationship between HIF-1α and JMJD3 were analyzed through bioinformatics. Then, we silenced HIF-1α, knocked down or overexpressed JMJD3, or treated gamma-secretase inhibitor (DAPT) in GC cells under hypoxic conditions. Cell proliferation, apoptosis, and Notch activation was determined both in vivo and vitro. We initially proved that both HIF-1α and JMJD3 were highly expressed in GC tissues, high expression of HIF-1α was associated with a poor prognosis. Functionally, we observed that HIF-1α knockdown attenuated GC cell proliferation and enhanced apoptosis under hypoxic conditions, while JMJD3 knockdown exerted the opposite effect in hypoxia-induced GC cells. Besides, JMJD3 overexpression promoted proliferation and reduced apoptosis by upregulating Notch in GC cells under hypoxia conditions. Furthermore, HIF-1α knockdown inhibited tumor growth and altered the pathological structure in the tumors of GC model nude mouse. In GC cells, HIF-1α knockdown inhibited cell proliferation and promoted apoptosis by affecting JMJD3/Notch axis. Therefore, we demonstrated that HIF-1α/JMJD3/Notch axis might be a new therapeutic target for GC.

据报道,缺氧可诱导多种癌症组织中HIF-1α的高表达,HIF-1α显著影响包括胃癌(GC)在内的癌症进展。然而,HIF-1α在GC过程中的作用机制尚不清楚。首先采用qRT-PCR和western blot检测GC组织中HIF-1α和JMJD3的表达。同时通过生物信息学分析HIF-1α的预后,以及HIF-1α与JMJD3的关系。然后,我们在缺氧条件下沉默GC细胞中的HIF-1α,敲低或过表达JMJD3,或处理γ -分泌酶抑制剂(DAPT)。在体内和体外均检测细胞增殖、凋亡和Notch激活。我们初步证实HIF-1α和JMJD3在胃癌组织中均高表达,HIF-1α高表达与预后不良相关。在功能上,我们观察到HIF-1α敲低可减弱缺氧条件下GC细胞的增殖并增强凋亡,而JMJD3敲低则在缺氧诱导的GC细胞中发挥相反的作用。此外,在缺氧条件下,JMJD3过表达通过上调Notch来促进GC细胞的增殖和减少凋亡。HIF-1α敲低抑制GC模型裸鼠肿瘤生长,改变肿瘤病理结构。在GC细胞中,HIF-1α下调通过影响JMJD3/Notch轴抑制细胞增殖,促进细胞凋亡。因此,我们证明HIF-1α/JMJD3/Notch轴可能是GC的一个新的治疗靶点。
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引用次数: 0
Dexmedetomidine activates mitophagy and protects against pyroptosis in oxygen-glucose deprivation/reperfusion-induced brain damage via PINK1/Parkin pathway activation. 右美托咪定通过激活PINK1/Parkin通路激活氧葡萄糖剥夺/再灌注诱导的脑损伤,激活线粒体自噬并防止焦亡。
IF 2.9 4区 生物学 Q2 BIOPHYSICS Pub Date : 2025-06-01 Epub Date: 2025-02-22 DOI: 10.1007/s10863-025-10051-4
Jieru Zhang, Ruxia Li, Luyong Wang, Shuqin Ni

Accumulating studies have unraveled that dexmedetomidine (DEX) is neuroprotective against brain damage. However, it remains largely unknown about the mechanism involved in the neuroprotective effect of DEX. Therefore, this study explored whether DEX could affect mitophagy and pyroptosis in hypoxic-ischemic brain damage. We established a hippocampal neuron model of oxygen glucose-deprivation (OGD) and a rat model of cerebral ischemia/reperfusion (I/R) injury, which were then intervened with DEX and the autophagy inhibitor (3-MA). It was found that DEX intervention significantly increased neuron viability and mitophagy. Additionally, DEX intervention reversed increased oxidative stress and pyroptosis caused by OGD. DEX intervention further maintained the activation of the PINK1/Parkin pathway, while 3-MA treatment partly counteracted the protective effect of DEX on OGD-induced hippocampal neurons, suggesting that the inhibition of the PINK1/Parkin pathway reversed the function of DEX to increase cell viability and mitophagy and inhibit oxidative stress, pyroptosis, and apoptosis. Animal experiments also revealed that DEX intervention induced PINK1/Parkin pathway activation, reduced cerebral infarction and mitochondrial damage, promoted mitophagy, and inhibited pyroptosis, which was nullified by 3-MA treatment. Conclusively, DEX protects against pyroptosis and activates mitophagy in OGD/R-induced brain damage by activating the PINK1/Parkin pathway.

越来越多的研究表明,右美托咪定(DEX)对大脑损伤具有神经保护作用。然而,DEX的神经保护作用的机制仍然是未知的。因此,本研究探讨DEX是否会影响缺氧缺血性脑损伤的线粒体自噬和焦亡。建立氧葡萄糖剥夺(OGD)海马神经元模型和脑缺血再灌注(I/R)损伤大鼠模型,给予DEX和自噬抑制剂(3-MA)干预。结果发现,DEX干预可显著增加神经元活力和线粒体自噬。此外,DEX干预逆转了OGD引起的氧化应激和焦亡的增加。DEX干预进一步维持了PINK1/Parkin通路的激活,而3-MA处理部分抵消了DEX对ogd诱导的海马神经元的保护作用,提示PINK1/Parkin通路的抑制逆转了DEX提高细胞活力和线粒体自噬、抑制氧化应激、焦亡和凋亡的功能。动物实验还发现,DEX干预可诱导PINK1/Parkin通路激活,减少脑梗死和线粒体损伤,促进线粒体自噬,抑制焦亡,3-MA处理可消除这一作用。总之,DEX通过激活PINK1/Parkin通路,在OGD/ r诱导的脑损伤中保护焦亡并激活有丝分裂。
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引用次数: 0
The Warburg hypothesis and the emergence of the mitochondrial metabolic theory of cancer. Warburg假说和线粒体代谢癌症理论的出现。
IF 2.9 4区 生物学 Q2 BIOPHYSICS Pub Date : 2025-06-01 Epub Date: 2025-04-08 DOI: 10.1007/s10863-025-10059-w
Thomas N Seyfried, Derek C Lee, Tomas Duraj, Nathan L Ta, Purna Mukherjee, Michael Kiebish, Gabriel Arismendi-Morillo, Christos Chinopoulos

Otto Warburg originally proposed that cancer arose from a two-step process. The first step involved a chronic insufficiency of mitochondrial oxidative phosphorylation (OxPhos), while the second step involved a protracted compensatory energy synthesis through lactic acid fermentation. His extensive findings showed that oxygen consumption was lower while lactate production was higher in cancerous tissues than in non-cancerous tissues. Warburg considered both oxygen consumption and extracellular lactate as accurate markers for ATP production through OxPhos and glycolysis, respectively. Warburg's hypothesis was challenged from findings showing that oxygen consumption remained high in some cancer cells despite the elevated production of lactate suggesting that OxPhos was largely unimpaired. New information indicates that neither oxygen consumption nor lactate production are accurate surrogates for quantification of ATP production in cancer cells. Warburg also did not know that a significant amount of ATP could come from glutamine-driven mitochondrial substrate level phosphorylation in the glutaminolysis pathway with succinate produced as end product, thus confounding the linkage of oxygen consumption to the origin of ATP production within mitochondria. Moreover, new information shows that cytoplasmic lipid droplets and elevated aerobic lactic acid fermentation are both biomarkers for OxPhos insufficiency. Warburg's original hypothesis can now be linked to a more complete understanding of how OxPhos insufficiency underlies dysregulated cancer cell growth. These findings can also address several questionable assumptions regarding the origin of cancer thus allowing the field to advance with more effective therapeutic strategies for a less toxic metabolic management and prevention of cancer.

奥托·沃伯格最初提出,癌症的产生有两个步骤。第一步涉及线粒体氧化磷酸化(OxPhos)的慢性不足,而第二步涉及通过乳酸发酵的长期代偿性能量合成。他广泛的研究结果表明,癌组织的耗氧量比非癌组织低,而乳酸产量比非癌组织高。Warburg认为氧气消耗和细胞外乳酸分别是通过OxPhos和糖酵解产生ATP的准确标记。Warburg的假设受到了一些研究结果的挑战,这些研究表明,尽管乳酸含量升高,但一些癌细胞的耗氧量仍然很高,这表明OxPhos基本上没有受损。新的信息表明,无论是氧气消耗还是乳酸产生都不能准确地代替癌细胞中ATP产生的定量。Warburg也不知道在谷氨酰胺水解途径中,大量的ATP可能来自谷氨酰胺驱动的线粒体底物水平磷酸化,最终产生琥珀酸盐,从而混淆了线粒体内氧气消耗与ATP产生起源的联系。此外,新的信息表明,细胞质脂滴和有氧乳酸发酵升高都是OxPhos不足的生物标志物。Warburg最初的假设现在可以与对OxPhos不足如何导致癌细胞生长失调的更全面的理解联系起来。这些发现也可以解决一些关于癌症起源的可疑假设,从而使该领域能够推进更有效的治疗策略,以实现毒性更小的代谢管理和癌症预防。
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引用次数: 0
Anti-inflammatory effects of Esomeprazole in septic lung injury by mediating endoplasmic reticulum stress. 埃索美拉唑介导内质网应激对脓毒性肺损伤的抗炎作用。
IF 2.9 4区 生物学 Q2 BIOPHYSICS Pub Date : 2025-06-01 Epub Date: 2025-03-12 DOI: 10.1007/s10863-025-10055-0
Peng Wang, Hui Li, Wencheng Wu

Acute lung injury characterized by overactive pulmonary inflammation is a common and serious complication of sepsis. Esomeprazole (ESO), a potent proton pump inhibitor (PPI), has been demonstrated as a promising anti-inflammatory agent in treating sepsis at high concentrations, the efficacy of which in sepsis-induced lung injury has not been explored. This research aimed to investigate the role of ESO in septic lung injury and the potential mechanism. The mice were pretreated by ESO prior to the construction of cecal ligation and puncture (CLP) sepsis model. MH-S lung macrophages were exposed to lipopolysaccharide (LPS) to induce inflammatory injury. The severity of lung damage was detected by H&E staining, measurement of lactic dehydrogenase (LDH) and lung wet/dry weight (W/D) ratio. The levels of inflammatory cytokines were detected by ELISA and Western blotting. The number of inflammatory cells was counted. Macrophage distribution was measured by immunohistochemical staining of macrophage markers. Western blotting also determined the expression of endoplasmic reticulum stress (ERS) and NLR family pyrin domain containing 3 (NLRP3) inflammasome-related proteins. CCK-8 method was used to detect cell viability. ESO concentration-dependently mitigated the pathological damage of lung tissues, reduced LDH activity, lung W/D ratio, decreased inflammatory cell counts and F4/80 expression in the lung tissues of sepsis mice. Besides, ESO suppressed inflammatory response, NLRP3 inflammasome activation and inactivated activating transcription factor 6 (ATF6)-CCAAT-enhancer-binding protein homologous protein (CHOP)-mediated ERS signaling both in vitro and in vivo. ATF6 overexpression partially reversed the impacts of ESO on NLRP3 inflammasome and the levels of inflammatory cytokines in LPS-induced MH-S cells. Anyway, ESO may inhibit ATF6/CHOP pathway to protect against inflammation in septic lung injury.

以过度活跃的肺部炎症为特征的急性肺损伤是脓毒症常见而严重的并发症。埃索美拉唑(Esomeprazole, ESO)是一种有效的质子泵抑制剂(PPI),已被证明是治疗高浓度脓毒症的一种有前景的抗炎药,但其在脓毒症诱导的肺损伤中的疗效尚未被探索。本研究旨在探讨ESO在脓毒性肺损伤中的作用及其可能机制。在构建盲肠结扎和穿刺(CLP)脓毒症模型之前,用ESO预处理小鼠。将MH-S肺巨噬细胞暴露于脂多糖(LPS)诱导炎症损伤。采用H&E染色、乳酸脱氢酶(LDH)测定和肺干湿重(W/D)比检测肺损伤程度。采用酶联免疫吸附法(ELISA)和免疫印迹法(Western blotting)检测炎症因子水平。计数炎症细胞的数量。巨噬细胞标记物免疫组化染色测定巨噬细胞分布。Western blotting还检测了内质网应激(ERS)和NLR家族pyrin domain containing 3 (NLRP3)炎性小体相关蛋白的表达。CCK-8法检测细胞活力。ESO浓度依赖性地减轻脓毒症小鼠肺组织病理损伤,降低LDH活性、肺W/D比,降低肺组织炎症细胞计数和F4/80表达。此外,ESO在体外和体内均抑制炎症反应、NLRP3炎性小体激活和失活活化转录因子6 (ATF6)- ccaat增强子结合蛋白同源蛋白(CHOP)介导的ERS信号。ATF6过表达部分逆转了ESO对lps诱导的MH-S细胞NLRP3炎性小体和炎性细胞因子水平的影响。无论如何,ESO可能抑制ATF6/CHOP通路,以保护脓毒性肺损伤的炎症。
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引用次数: 0
Differences in metabolite profiling by cold atmospheric plasma in normal and cancer cells. 正常细胞和癌细胞中低温大气血浆代谢物谱的差异。
IF 2.9 4区 生物学 Q2 BIOPHYSICS Pub Date : 2025-06-01 Epub Date: 2025-05-05 DOI: 10.1007/s10863-025-10061-2
A B Zinnurova, K P Vorobyov, O V Bakina, E I Senkina, T B Lepekhina, V V Nikolaev, L V Spirina

Cold atmospheric plasma (CAP) recently it has been introduced as an innovative therapeutic approach for cancer cell treatment. However the cancer treatment faces questions about the selective anti-cancer capacity of CAP, the distinct molecular responses between cancer and normal cells. In present work 3T3 fibroblast and MCF-7 breast cancer epithelial cells were subjected to treatment of CAP with atmospheric discharge with runaway electrons. We have shown that a decrease in the 3T3 and MCF-7 cell viability under the influence of CAP. In addition, there was an increase in lactate dehydrogenase activity and an increase in the amount of NAD(P)H. An increase in the duration and dose of cold plasma exposure to living systems leaded to a change in the metabolic activity of cells. It was noted that after exposure to the culture of normal and cancer cells, there variability in biochemical and metabolic effects (lactate and growth of free form NAD(P)H), which was primarily accompanied shift in the equilibrium between oxidative phosphorylation and glycolysis. Therefore, cold plasma, at the same dose of radiation, has a stimulating effect on 3T3 cells and an apoptotic effect on MCF-7 cells, leading to a reduction in their metabolic activity. This results in a shift in the metabolic balance towards glycolysis for both 3T3 and MCF-7 cell cultures.

冷大气等离子体(CAP)最近被介绍为一种创新的治疗癌细胞的方法。然而,CAP的选择性抗癌能力、癌变细胞与正常细胞之间不同的分子反应等都是癌症治疗面临的问题。本研究将3T3成纤维细胞和MCF-7乳腺癌上皮细胞用失控电子大气放电处理。我们已经证明,在CAP的影响下,3T3和MCF-7细胞活力下降。此外,乳酸脱氢酶活性增加,NAD(P)H量增加。低温等离子体暴露于生命系统的时间和剂量的增加导致细胞代谢活性的变化。我们注意到,在暴露于正常细胞和癌细胞的培养后,生化和代谢效应(乳酸和自由形式NAD(P)H的生长)存在差异,这主要伴随着氧化磷酸化和糖酵解之间平衡的改变。因此,在相同剂量的辐射下,冷等离子体对3T3细胞有刺激作用,对MCF-7细胞有凋亡作用,导致其代谢活性降低。这导致代谢平衡向糖酵解的3T3和MCF-7细胞培养的转变。
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引用次数: 0
KunMingShanHaiTang formula reprograms macrophage metabolism and promotes M2 polarization via the HIF-1α pathway to alleviate ulcerative colitis symptoms in a rat model. 昆明山海棠方通过HIF-1α途径重编程巨噬细胞代谢,促进M2极化,减轻溃疡性结肠炎大鼠模型症状。
IF 2.9 4区 生物学 Q2 BIOPHYSICS Pub Date : 2025-06-01 Epub Date: 2025-04-02 DOI: 10.1007/s10863-025-10056-z
Zhiyun Zhang, Zhen Wang, Weiping Wan, Shumin Li, Wenzhi Yang, XiNan Shi

The KunMingShanHaiTang Formula (KMSHTF), adjusted by Professor Zhong Chuanhua for the treatment of ulcerative colitis (UC), is the work of a renowned veteran practitioner of Chinese medicine. However, its specific mechanism remains unknown. Consequently, it is intriguing to investigate the molecular mechanism by which KMSHTF treats UC. To elucidate the mechanism of KMSHTF in the treatment of UC in rats. Initially, the active ingredients and key target genes of KMSHTF in treating UC were analyzed using network pharmacology. Protein-Protein interaction and gene enrichment analyses were performed to predict key targets and pathways. Subsequently, UC rats were treated with KMSHTF, and the expression proteins in intestinal tissue were detected. Finally, the active compounds of KMSHTF intreating ulcerative colitis were further screened using Molecular Docking, and their pharmacological effects were validated through cell experiments. A total of 47 active compounds and 365 key target genes of KMSHTF for UC treatment were identified through the Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform,along with the GeneCards database. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) Enrichment Analysis revealed that KMSHTF exerted its therapeutic effects on UC through regulating multiple pathways. In this study, the HIF-1α pathway was selected as the main molecular pathway of KMSHTF treating UC, and further validation was conducted through in vivo and in vitro experiments.Animal studies revealed that KMSHTF significantly ameliorated UC symptoms in rats, including diarrhea,rectal bleeding and specific pathological alterations in the intestinal wall. Furthermore, KMSHTF reduced pro-inflammatory cytokines IL-6 and TNF-α, up-regulated IL-4 of M2 macrophages and down-regulated iNOS and IL-1β of M1 macrophages. Additionally, it decreased the expression levels of HKII and GLUT1 related HIF-1α pathway. The three active compounds of KMSHTF, Baicalein, Palmatine and Triptonide-were selected based on their strong binding affinity with HIF-1α and HKII through computational molecular docking. Cellular experiments demonstrated that each of these compounds downregulated the protein expression levels of HIF-1α, HKII, GLUT1 and IL-6 in an intestinal wall cell model. Of Note, Baicalein exhibited the most pronounced effect. However, the overexpression of HIF-1α reversed the Baicalein-induced downregulation of HKII, GLUT1 and IL-6 at the protein level in vitro. KMSHTF may modulate macrophage metabolism to promote M2 polarization through the HIF-1α pathway, thereby contributing to its therapeutic efficacy in ulcerative colitis (UC). Baicalein, Palmatine, and Triptonide are the three core active compounds of KMSHTF that primarily contribute to this hypothesis.

由钟传华教授调制的治疗溃疡性结肠炎的“昆明山海棠方”,是著名老中医的作品。然而,其具体机制尚不清楚。因此,研究KMSHTF治疗UC的分子机制是很有趣的。目的:探讨KMSHTF治疗大鼠UC的作用机制。首先利用网络药理学分析KMSHTF治疗UC的有效成分和关键靶基因。通过蛋白-蛋白相互作用和基因富集分析来预测关键靶点和途径。随后,用KMSHTF处理UC大鼠,检测其在肠组织中的表达蛋白。最后,利用分子对接技术进一步筛选KMSHTF治疗溃疡性结肠炎的活性化合物,并通过细胞实验验证其药理作用。通过中药系统药理学数据库和分析平台,以及GeneCards数据库,共鉴定出47种KMSHTF治疗UC的活性化合物和365个关键靶基因。基因本体(GO)和京都基因基因组百科全书(KEGG)富集分析显示,KMSHTF通过调控多种途径发挥其对UC的治疗作用。本研究选择HIF-1α途径作为KMSHTF治疗UC的主要分子途径,并通过体内和体外实验进行进一步验证。动物实验显示,KMSHTF可显著改善大鼠UC症状,包括腹泻、直肠出血和肠壁特异性病理改变。此外,KMSHTF降低促炎因子IL-6和TNF-α,上调M2巨噬细胞IL-4,下调M1巨噬细胞iNOS和IL-1β。此外,它还能降低HKII和GLUT1相关HIF-1α通路的表达水平。基于KMSHTF与HIF-1α和HKII较强的结合亲和力,通过计算分子对接筛选出黄芩素、棕榈素和雷公藤素3个活性化合物。细胞实验表明,这些化合物在肠壁细胞模型中下调HIF-1α、HKII、GLUT1和IL-6的蛋白表达水平。值得注意的是,黄芩苷表现出最明显的效果。然而,HIF-1α的过表达在蛋白水平上逆转了黄芩素诱导的HKII、GLUT1和IL-6的下调。KMSHTF可能通过HIF-1α途径调节巨噬细胞代谢,促进M2极化,从而发挥其治疗溃疡性结肠炎(UC)的作用。黄芩素、棕榈碱和雷公藤内酯是KMSHTF的三种核心活性化合物,主要有助于这一假设。
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引用次数: 0
Mechanism of LncRNA CBR3-AS1 in regulating pyroptosis of intestinal epithelial cells in ulcerative colitis. LncRNA CBR3-AS1调控溃疡性结肠炎肠上皮细胞焦亡的机制
IF 2.9 4区 生物学 Q2 BIOPHYSICS Pub Date : 2025-06-01 Epub Date: 2025-04-21 DOI: 10.1007/s10863-025-10060-3
Xi Li, Caiwen Yan, Suxia Li, Lujun Shen, Lijuan Huo

Ulcerative colitis (UC) is a common chronic relapsing inflammatory disease that threatens human life. This study aims to explore the mechanism of LncRNA CBR3-AS1 in pyroptosis of intestinal epithelial cells in UC. The levels of CBR3-AS1, KLF2, and SUGT1 in UC cells were detected. After downregulating CBR3-AS1 expression, cell viability and pyroptosis were measured, followed by the detection of SOD and MDA levels. The binding of CBR3-AS1 to EZH2, enrichment of EZH2 and H3K27me3 on the KLF2 promoter, and binding of KLF2 to the SUGT1 promoter were assayed. The role of CBR3-AS1 in pyroptosis was validated in animal models. We found that CBR3-AS1 and SUGT1 were increased in UC cells, and KLF2 was decreased. After downregulation of CBR3-AS1, cell viability was increased and pyroptosis was alleviated. CBR3-AS1 recruited EZH2 to occupy the KLF2 promoter, leading to increased H3K27me3 levels and suppressed KLF2 expression, reducing the enrichment of KLF2 on the SUGT1 promoter, finally promoting SUGT1 expression. SUGT1 overexpression or KLF2 downregulation alleviated the protective effect of silencing CBR3-AS1 on pyroptosis in UC cells. CBR3-AS1 downregulation alleviates cell pyroptosis in colonic tissues. In conclusion, CBR3-AS1 exacerbated pyroptosis of intestinal epithelial cells in UC via the KLF2/SUGT1 pathway.

溃疡性结肠炎(UC)是一种常见的慢性复发性炎症性疾病,威胁着人类的生命安全。本研究旨在探讨LncRNA CBR3-AS1在UC肠上皮细胞焦亡中的作用机制。检测UC细胞中CBR3-AS1、KLF2、SUGT1水平。下调CBR3-AS1表达后,测定细胞活力和焦亡率,检测SOD和MDA水平。研究了CBR3-AS1与EZH2的结合、EZH2和H3K27me3在KLF2启动子上的富集以及KLF2与SUGT1启动子的结合。在动物模型中验证了CBR3-AS1在焦亡中的作用。我们发现CBR3-AS1和SUGT1在UC细胞中升高,KLF2降低。下调CBR3-AS1后,细胞活力增加,焦亡减轻。CBR3-AS1招募EZH2占据KLF2启动子,导致H3K27me3水平升高,抑制KLF2表达,减少了KLF2在SUGT1启动子上的富集,最终促进了SUGT1的表达。SUGT1过表达或KLF2下调可减轻沉默CBR3-AS1对UC细胞焦亡的保护作用。下调CBR3-AS1可减轻结肠组织细胞焦亡。综上所述,CBR3-AS1通过KLF2/SUGT1通路加重UC中肠上皮细胞的焦亡。
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引用次数: 0
Correction: Dexmedetomidine activates mitophagy and protects against pyroptosis in oxygen-glucose deprivation/reperfusion-induced brain damage via PINK1/Parkin pathway activation. 更正:右美托咪定通过激活PINK1/Parkin通路激活氧葡萄糖剥夺/再灌注诱导的脑损伤,激活线粒体自噬并防止焦凋亡。
IF 2.9 4区 生物学 Q2 BIOPHYSICS Pub Date : 2025-06-01 DOI: 10.1007/s10863-025-10058-x
Jieru Zhang, Ruxia Li, Luyong Wang, Shuqin Ni
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引用次数: 0
Amyloid beta (Aβ) fibrillation kinetics and its impact on membrane polarity. 淀粉样蛋白(Aβ)颤动动力学及其对膜极性的影响。
IF 2.9 4区 生物学 Q2 BIOPHYSICS Pub Date : 2025-02-01 Epub Date: 2025-01-06 DOI: 10.1007/s10863-024-10046-7
Arun Ajaikumar, Nozomi Morishita Watanabe, Keishi Suga, Yukihiro Okamoto, Hiroshi Umakoshi

Fibrillation of the amyloid beta (Aβ) peptide has often been associated with neurodegenerative pathologies such as Alzheimer's disease. In this study we examined the influence of several potential compositions of the lipid membrane on Aβ fibrillation by using liposomes as a basic model membrane. Firstly, it was revealed that Aβ fibrillation kinetics were enhanced and had the potential to occur at a faster rate on more fluid membranes compared to solid membranes. Next, the extent of fibril-related damage to membranes was examined with analysis of membrane polarity via the steady-state emission spectra of 6-dodecanoyl-2-dimethylaminonaphthalene (Laurdan). It was revealed that there was slight hydration behavior of the membrane during the lag phase (tlag) of the kinetic process, possibly coinciding with Aβ monomer binding. However, as the fibrillation kinetic process continued the membrane gradually dehydrated. Hydration states of membranes during and after Aβ fibrillation processes were further examined via deconvolution analysis of the obtained Laurdan spectra. This allows a mapping of membrane hydration from the interior to exterior regions of the lipid membrane. Results revealed slight but definitive variations in deeper region membrane polarity during the time course of Aβ fibrillation, suggesting Aβ aggregation impacts not only the surface level aggregating region but also the inner regions of the membrane. These results can ultimately contribute to the future investigations of the nature of the membrane damage caused by Aβ aggregation.

淀粉样蛋白β (Aβ)肽的纤颤常与神经退行性病变如阿尔茨海默病有关。在这项研究中,我们以脂质体作为基本模型膜,研究了脂膜的几种潜在成分对心房纤颤的影响。首先,发现与固体膜相比,在更多的流体膜上,a β颤动动力学得到增强,并且有可能以更快的速度发生。接下来,通过6-十二烷基-2-二甲氨基萘(Laurdan)的稳态发射光谱分析膜极性,研究了原纤维对膜的损伤程度。结果表明,在动力学过程的滞后期(flag),膜有轻微的水化行为,可能与Aβ单体结合相吻合。然而,随着纤颤动力学过程的继续,膜逐渐脱水。通过对得到的Laurdan光谱进行反褶积分析,进一步研究了纤颤过程中和纤颤过程后膜的水合状态。这允许从脂质膜的内部到外部区域的膜水合作用的映射。结果显示,在Aβ颤动的时间过程中,深层膜极性发生了轻微但明确的变化,表明Aβ聚集不仅影响表面聚集区域,而且影响膜的内部区域。这些结果最终有助于未来研究由Aβ聚集引起的膜损伤的性质。
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Journal of Bioenergetics and Biomembranes
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