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Diazoxide improves muscle function in association with improved dyslipidemia and decreased muscle oxidative stress in streptozotocin-induced diabetic rats. 在链脲佐菌素诱导的糖尿病大鼠中,二氮氧化合物改善肌肉功能、改善血脂异常和降低肌肉氧化应激。
IF 3 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-02-01 DOI: 10.1007/s10863-023-09958-7
Manuel Alejandro Vargas-Vargas, Alfredo Saavedra-Molina, Mariana Gómez-Barroso, Donovan Peña-Montes, Christian Cortés-Rojo, Alain R Rodríguez-Orozco, Montoya-Pérez Rocío

Aim/introduction: Diabetes Mellitus is a chronic degenerative disease, and its main biochemical characteristic is hyperglycemia due to impaired insulin secretion, resistance to peripheral actions of insulin, or both. Hyperglycemia causes dyslipidemia and stimulates oxidative damage, leading to the main symptoms, such as fatigue and culminates in diabetic complications. Previous studies have shown that ATP-sensitive potassium channels counteract muscle fatigue and metabolic stress in healthy mouse models. To determine the effect of diazoxide on muscle strength development during diabetes, we tested the effect of diazoxide in streptozotocin-diabetic rats in muscle function, lipid profile and oxidative stress biomarkers.

Materials and methods: Wistar rats were divided into 4 groups of six animals each: (1) Control group, (2) diabetes group, (3) Control group + diazoxide, and (4) Diabetic + diazoxide (DB + DZX). 4 weeks after rats were sacrificed, soleus and extensor digitorum longus muscles (EDL) were extracted to prepare homogenates and serum was obtained for biochemical measurements. Oxidative damage was evaluated by the thiobarbituric acid method and the fluorescent for reactive oxygen species (ROS) probe 2,4-H2DCFDA, respectively.

Results: Diabetic rats with diazoxide administration showed an increase in the development of muscle strength in both muscles; in turn, the onset of fatigue was longer compared to the group of diabetic rats without treatment. Regarding the lipid profile, diazoxide decreased total cholesterol levels in the group of diabetic rats treated with diazoxide (x̅46.2 mg/dL) compared to the untreated diabetic group (x̅=104.4 mg/dL); secondly, diazoxide decreased triglyceride concentrations (x̅=105.3 mg/dL) compared to the untreated diabetic rats (x̅=412.2 mg/dL) as well as the levels of very low-density lipoproteins (x̅=20.4 mg/dL vs. x̅=82.44 mg/dL). Regarding the various markers of oxidative stress, the diabetic group treated with diazoxide was able to reduce the concentrations of TBARS and total reactive oxygen species as well as preserve the concentrations of reduced glutathione.

Conclusion: Diazoxide administration in diabetic rats increases muscle strength development in EDL and soleus muscle, decreases fatigue, reduces cholesterol and triglyceride concentrations and improves oxidative stress parameters such as TBARS, ROS, and glutathione status.

目的/简介:糖尿病是一种慢性退行性疾病,其主要生化特征是由于胰岛素分泌受损或对胰岛素外周作用的抵抗或两者兼而有之而引起的高血糖。高血糖引起血脂异常,刺激氧化损伤,导致主要症状,如疲劳,并最终导致糖尿病并发症。先前的研究表明,在健康小鼠模型中,atp敏感的钾通道可以抵消肌肉疲劳和代谢应激。为了确定二氮氧化物对糖尿病期间肌肉力量发展的影响,我们测试了二氮氧化物对链脲佐菌素糖尿病大鼠肌肉功能、脂质谱和氧化应激生物标志物的影响。材料与方法:将Wistar大鼠分为4组,每组6只:(1)对照组,(2)糖尿病组,(3)对照组+二氮氧化物组,(4)糖尿病+二氮氧化物组(DB + DZX)。处死大鼠4周后,提取比目鱼肌和指长伸肌(EDL)制备匀浆,取血清进行生化测定。分别采用硫代巴比妥酸法和活性氧(ROS)探针2,4- h2dcfda荧光法评价氧化损伤。结果:糖尿病大鼠给药后,两组肌肉力量的发育均有所增加;反过来,与未治疗的糖尿病大鼠组相比,疲劳发作时间更长。在血脂方面,与未治疗的糖尿病组相比,用二氮氧化合物治疗的糖尿病大鼠的总胆固醇水平(x值为46.2 mg/dL)降低(x值为104.4 mg/dL);其次,与未治疗的糖尿病大鼠(x′s =412.2 mg/dL)相比,二氮氧化合物降低了甘油三酯浓度(x′s =105.3 mg/dL)以及极低密度脂蛋白水平(x′s =20.4 mg/dL vs. x′s =82.44 mg/dL)。关于氧化应激的各种标志物,用二氮氧化物治疗的糖尿病组能够降低TBARS和总活性氧的浓度,并保持还原性谷胱甘肽的浓度。结论:糖尿病大鼠给予二氮氧化物可促进EDL和比目鱼肌肌力发育,减轻疲劳,降低胆固醇和甘油三酯浓度,改善氧化应激参数,如TBARS、ROS和谷胱甘肽状态。
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引用次数: 1
G protein-coupled receptor 39 alleviates mitochondrial dysfunction and hepatocyte lipid accumulation via SIRT1/Nrf2 signaling. G蛋白偶联受体39通过SIRT1/Nrf2信号通路缓解线粒体功能障碍和肝细胞脂质积累。
IF 3 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-02-01 DOI: 10.1007/s10863-022-09953-4
Qiang Chen, Yifeng Lou

Objective: Data in the GEO database (GSE63067) showed that G protein-coupled receptor 39 (GPR39) was down-regulated in tissues from patients with non-alcoholic fatty liver disease (NAFLD). It was intended to explore the mechanism of GPR39 in NAFLD.

Methods: HepG2 cells were treated with a mixture of oleic acid and palmitic acid (OA/PA) to mimic NAFLD cell models. The level of GPR39 and the functions of GPR39 on cellular oxidative stress, lipid accumulation, the SIRT1/Nrf2 signaling and mitochondrial dysfunction were assessed. To verify the mediation of the SIRT1 signaling pathway in GPR39 regulation, cells were subjected to SIRT1 inhibitor EX-527 treatment. Afterwards, the abovementioned aspects of cells were all determined.

Results: GPR39 presented a downward trend in response to OA/PA. GPR39 overexpression could suppress oxidative stress, lipid accumulation and activate the SIRT1/Nrf2 signaling. GPR39 overexpression likewise alleviated mitochondrial dysfunction, whereas EX-527 treatment disturbed the effects of GPR39 overexpression on these aspects.

Conclusion: The present study found that GPR39 reduced oxidative stress and maintained mitochondrial homeostasis in a cellular model of NAFLD, a process mediated by SIRT1/Nrf2 signaling.

目的:GEO数据库(GSE63067)的数据显示,G蛋白偶联受体39 (GPR39)在非酒精性脂肪性肝病(NAFLD)患者组织中下调。旨在探讨GPR39在NAFLD中的作用机制。方法:采用油酸和棕榈酸(OA/PA)混合处理HepG2细胞,模拟NAFLD细胞模型。评估GPR39水平及GPR39在细胞氧化应激、脂质积累、SIRT1/Nrf2信号和线粒体功能障碍中的作用。为了验证SIRT1信号通路在GPR39调控中的中介作用,我们对细胞进行了SIRT1抑制剂EX-527处理。随后,对细胞的上述各方面都进行了测定。结果:OA/PA组GPR39呈下降趋势。GPR39过表达可抑制氧化应激、脂质积累,激活SIRT1/Nrf2信号。GPR39过表达同样减轻了线粒体功能障碍,而EX-527治疗干扰了GPR39过表达对这些方面的影响。结论:本研究发现GPR39在NAFLD细胞模型中通过SIRT1/Nrf2信号通路介导的过程中降低氧化应激并维持线粒体稳态。
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引用次数: 2
Caffeine improves mitochondrial function in PINK1B9-null mutant Drosophila melanogaster. 咖啡因改善pink1b9缺失突变体黑腹果蝇线粒体功能。
IF 3 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-02-01 DOI: 10.1007/s10863-022-09952-5
Débora F Gonçalves, Leahn R Senger, João V P Foletto, Paula Michelotti, Félix A A Soares, Cristiane L Dalla Corte

Mitochondrial dysfunction plays a central role in Parkinson's disease (PD) and can be triggered by xenobiotics and mutations in mitochondrial quality control genes, such as the PINK1 gene. Caffeine has been proposed as a secondary treatment to relieve PD symptoms mainly by its antagonistic effects on adenosine receptors (ARs). Nonetheless, the potential protective effects of caffeine on mitochondrial dysfunction could be a strategy in PD treatment but need further investigation. In this study, we used high-resolution respirometry (HRR) to test caffeine's effects on mitochondrial dysfunction in PINK1B9-null mutants of Drosophila melanogaster. PINK1 loss-of-function induced mitochondrial dysfunction in PINK1B9-null flies observed by a decrease in O2 flux related to oxidative phosphorylation (OXPHOS) and electron transfer system (ETS), respiratory control ratio (RCR) and ATP synthesis compared to control flies. Caffeine treatment improved OXPHOS and ETS in PINKB9-null mutant flies, increasing the mitochondrial O2 flux compared to untreated PINKB9-null mutant flies. Moreover, caffeine treatment increased O2 flux coupled to ATP synthesis and mitochondrial respiratory control ratio (RCR) in PINK 1B9-null mutant flies. The effects of caffeine on respiratory parameters were abolished by rotenone co-treatment, suggesting that caffeine exerts its beneficial effects mainly by stimulating the mitochondrial complex I (CI). In conclusion, we demonstrate that caffeine may improve mitochondrial function by increasing mitochondrial OXPHOS and ETS respiration in the PD model using PINK1 loss-of-function mutant flies.

线粒体功能障碍在帕金森病(PD)中起着核心作用,可由异种生物和线粒体质量控制基因(如PINK1基因)的突变触发。咖啡因主要通过其对腺苷受体(ARs)的拮抗作用而被认为是缓解PD症状的次要治疗方法。尽管如此,咖啡因对线粒体功能障碍的潜在保护作用可能是帕金森病治疗的一种策略,但需要进一步研究。在这项研究中,我们使用高分辨率呼吸测量(HRR)来检测咖啡因对黑腹果蝇pink1b9缺失突变体线粒体功能障碍的影响。PINK1功能缺失导致pink1b9缺失果蝇线粒体功能障碍,与对照蝇相比,与氧化磷酸化(OXPHOS)和电子传递系统(ETS)、呼吸控制比(RCR)和ATP合成相关的O2通量减少。与未处理的PINKB9-null突变果蝇相比,咖啡因处理改善了PINKB9-null突变果蝇的OXPHOS和ETS,增加了线粒体O2通量。此外,咖啡因处理增加了与ATP合成相关的O2通量和PINK 1B9-null突变果蝇的线粒体呼吸控制率(RCR)。鱼藤酮共处理可消除咖啡因对呼吸参数的影响,提示咖啡因主要通过刺激线粒体复合体I (CI)发挥其有益作用。总之,我们证明咖啡因可以通过增加PINK1功能缺失突变果蝇PD模型中的线粒体OXPHOS和ETS呼吸来改善线粒体功能。
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引用次数: 2
The status and trends of mitochondrial dynamics research: A global bibliometric and visualized analysis. 线粒体动力学研究的现状和趋势:全球文献计量和可视化分析。
IF 3 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-02-01 DOI: 10.1007/s10863-023-09959-6
Zijian Guo, Zehua Wang, Zhenzhong Gao, Tengda Feng, Yingjie Gao, Zhiwen Yin, Zui Tian, Yang Liu, Xingjia Mao, Chuan Xiang

Background: Mitochondria are remarkably dynamic organelles encapsulated by bilayer membranes. The dynamic properties of mitochondria are critical for energy production.

Aims: The aim of our study is to investigate the global status and trends of mitochondrial dynamics research and predict popular topics and directions in the field.

Methods: Publications related to the studies of mitochondrial dynamics from 2002 to 2021 were retrieved from Web of Science database. A total of 4,576 publications were included. Bibliometric analysis was conducted by visualization of similarities viewer and GraphPadPrism 5 software.

Results: There is an increasing trend of mitochondrial dynamics research during the last 20 years. The cumulative number of publications about mitochondrial dynamics research followed the logistic growth model [Formula: see text]. The USA made the highest contributions to the global research. The journal Biochimica et Biophysica Acta (BBA)-Molecular Cell Research had the largest publication numbers. Case Western Reserve University is the most contributive institution. The main research orientation and funding agency were cell biology and HHS. All keywords related studies could be divided into three clusters: "Related disease research", "Mechanism research" and "Cell metabolism research".

Conclusions: Attention should be drawn to the latest popular research and more efforts will be put into mechanistic research, which may inspire new clinical treatments for the associated diseases.

背景:线粒体是由双层膜包裹的动态细胞器。线粒体的动态特性对能量产生至关重要。目的:本研究旨在了解线粒体动力学研究的全球现状和趋势,并预测该领域的热门话题和方向。方法:从Web of Science数据库中检索2002 - 2021年线粒体动力学研究相关的出版物。共收录4 576份出版物。采用可视化相似度查看器和GraphPadPrism 5软件进行文献计量学分析。结果:近20年来,线粒体动力学的研究呈上升趋势。线粒体动力学研究的累计出版物数量遵循logistic增长模型[公式:见文本]。美国对全球研究的贡献最大。《生物化学与生物物理学报(BBA)-分子细胞研究》杂志的出版数量最多。凯斯西储大学是贡献最大的机构。主要的研究方向和资助机构是细胞生物学和HHS。关键词相关研究可分为“相关疾病研究”、“机制研究”和“细胞代谢研究”三大类。结论:应重视最新的流行研究,加大对其机理的研究力度,为相关疾病的临床治疗提供新的思路。
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引用次数: 1
Correction to: Glycolytic inhibitors 2-deoxyglucose and 3-bromopyruvate synergize with photodynamic therapy respectively to inhibit cell migration. 修正:糖酵解抑制剂2-脱氧葡萄糖和3-溴丙酮酸分别与光动力疗法协同作用,抑制细胞迁移。
IF 3 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-02-01 DOI: 10.1007/s10863-022-09955-2
Xiaolan Feng, Pan Wang, Quanhong Liu, Ting Zhang, Bingjie Mai, Xiaobing Wang
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引用次数: 0
Resveratrol ameliorates myocardial ischemia/reperfusion induced necroptosis through inhibition of the Hippo pathway. 白藜芦醇通过抑制Hippo通路改善心肌缺血/再灌注诱导的坏死下垂。
IF 3 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-02-01 DOI: 10.1007/s10863-022-09954-3
Hao Tian, Yonghong Xiong, Zhongyuan Xia

Myocardial ischemia-reperfusion (I/R) injury is a major cause of poor hemodynamic reconstitution outcomes after myocardial infarction or circulatory arrest. Currently, the search for effective therapeutic agents and tools is a focus of research in the field of myocardial I/R injury. Resveratrol (Res) has been extensively studied in recent years because of its good cardiovascular therapeutic effects, but its specific mechanism of action has not been fully elucidated. Therefore, the aim of this study was to investigate the mechanism of interaction between myocardial I/R injury and Res in vitro and in vivo. In our in vivo study, we used PI/TUNEL staining and western blotting to detect relevant necroptotic key molecules such as RIP1, RIP3 and p-MLKL/MLKL to observe myocardial necroptosis. The extent of myocardial injury was determined using hematoxylin and eosin (HE) staining and 2,3,5-triphenyltetrazolium chloride (TTC) staining as well as serum levels of CK-MB and LDH and echocardiography. In the in vitro study, cellular injury was assessed by CCK-8 and cell supernatant LDH levels. In addition, we used small interfering RNA (siRNA) transfection to knock down YAP, a key effector molecule of the Hippo pathway, to validate the molecular mechanism of action by which Res exerts myocardial protection. The localization of YAP in H9c2 cardiomyocytes was examined using immunofluorescence. Our data demonstrated that Res could ameliorate myocardial I/R-induced necroptosis by modulating the Hippo pathway, and that the beneficial effect of Res might be associated with nuclear translocation of the transcriptional regulator YAP.

心肌缺血再灌注(I/R)损伤是心肌梗死或循环停止后血流动力学重建结果不佳的主要原因。目前,寻找有效的治疗药物和工具是心肌I/R损伤领域的研究热点。白藜芦醇(Resveratrol, Res)具有良好的心血管治疗作用,近年来被广泛研究,但其具体的作用机制尚未完全阐明。因此,本研究旨在探讨体外和体内心肌I/R损伤与Res相互作用的机制。在我们的体内研究中,我们采用PI/TUNEL染色和western blotting检测相关坏死关键分子RIP1、RIP3和p-MLKL/MLKL,观察心肌坏死。采用苏木精和伊红(HE)染色、2,3,5-三苯四唑氯(TTC)染色、血清CK-MB、LDH水平及超声心动图检测心肌损伤程度。在体外研究中,通过CCK-8和细胞上清LDH水平评估细胞损伤。此外,我们利用小干扰RNA (siRNA)转染,敲低Hippo通路的关键效应分子YAP,验证Res发挥心肌保护作用的分子机制。免疫荧光法检测YAP在H9c2心肌细胞中的定位。我们的数据表明,Res可以通过调节Hippo通路改善I/ r诱导的心肌坏死,并且Res的有益作用可能与转录调节因子YAP的核易位有关。
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引用次数: 2
The evolution of the human mitochondrial bc1 complex- adaptation for reduced rate of superoxide production? 人类线粒体bc1复合体的进化——对超氧化物生成速率降低的适应?
IF 3 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-02-01 DOI: 10.1007/s10863-023-09957-8
Hagai Rottenberg

The mitochondrial bc1 complex is a major source of mitochondrial superoxide. While bc1-generated superoxide plays a beneficial signaling role, excess production of superoxide lead to aging and degenerative diseases. The catalytic core of bc1 comprises three peptides -cytochrome b, Fe-S protein, and cytochrome c1. All three core peptides exhibit accelerated evolution in anthropoid primates. It has been suggested that the evolution of cytochrome b in anthropoids was driven by a pressure to reduce the production of superoxide. In humans, the bc1 core peptides exhibit anthropoid-specific substitutions that are clustered near functionally critical sites that may affect the production of superoxide. Here we compare the high-resolution structures of bovine, mouse, sheep and human bc1 to identify structural changes that are associated with human-specific substitutions. Several cytochrome b substitutions in humans alter its interactions with other subunits. Most significantly, there is a cluster of seven substitutions, in cytochrome b, the Fe-S protein, and cytochrome c1 that affect the interactions between these proteins at the tether arm of the Fe-S protein and may alter the rate of ubiquinone oxidation and the rate of superoxide production. Another cluster of substitutions near heme bH and the ubiquinone reduction site, Qi, may affect the rate of ubiquinone reduction and thus alter the rate of superoxide production. These results are compatible with the hypothesis that cytochrome b in humans (and other anthropoid primates) evolve to reduce the rate of production of superoxide thus enabling the exceptional longevity and exceptional cognitive ability of humans.

线粒体bc1复合体是线粒体超氧化物的主要来源。虽然bc1产生的超氧化物起着有益的信号作用,但过量的超氧化物产生会导致衰老和退行性疾病。bc1的催化核心由细胞色素b、Fe-S蛋白和细胞色素c1三个多肽组成。所有三个核心肽在类人猿灵长类动物中都表现出加速的进化。有人认为,类人猿细胞色素b的进化是由减少超氧化物产生的压力驱动的。在人类中,bc1核心肽表现出类人猿特异性的取代,这些取代聚集在可能影响超氧化物产生的功能关键位点附近。在这里,我们比较了牛、小鼠、羊和人类bc1的高分辨率结构,以确定与人类特异性替代相关的结构变化。人类细胞色素b的几个替换改变了它与其他亚基的相互作用。最重要的是,在细胞色素b、Fe-S蛋白和细胞色素c1中存在7个取代簇,这些取代簇影响了Fe-S蛋白系链臂上这些蛋白之间的相互作用,并可能改变泛醌氧化的速率和超氧化物的产生速率。血红素bH和泛素还原位点Qi附近的另一个取代簇可能会影响泛素还原的速率,从而改变超氧化物的生成速率。这些结果与人类(和其他类人猿灵长类动物)细胞色素b的进化降低了超氧化物的产生速度,从而使人类具有超长的寿命和超长的认知能力的假设是一致的。
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引用次数: 0
Exposure of combination of environmental pollutant, lead (Pb) and β-amyloid peptides causes mitochondrial dysfunction and oxidative stress in human neuronal cells. 环境污染物、铅和β-淀粉样肽联合暴露可引起人神经元细胞线粒体功能障碍和氧化应激。
IF 3 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2023-02-01 DOI: 10.1007/s10863-023-09956-9
Lakshmi Jaya Madhuri Bandaru, Lokesh Murumulla, Bindu Lasya C, Krishna Prasad D, Suresh Challa

Exposure to the environmental pollutant lead (Pb) has been linked to Alzheimer's disease (AD), in which mitochondrial dysfunction is a pathological consequence of neuronal degeneration. The toxicity of Pb in combination with β-amyloid peptides (1-40) and (25-35) causes selective death in neuronal cells. However, the precise mechanism through which Pb induces Alzheimer's disease, particularly mitochondrial damage, is unknown. Changes in mitochondrial mass, membrane potential, mitochondrial complex activities, mitochondrial DNA and oxidative stress were examined in neuronal cells of human origin exposed to Pb and β-amyloid peptides (1-40) and (25-35) individually and in different combinations. The results showed depolarization of mitochondrial membrane potential, decrease in mitochondrial mass, ATP levels and mtDNA copy number in Pb and β-amyloid peptides (1-40) and (25-35) exposed cells. Also, significant reductions in the expression of mitochondrial electron transport chain (ETC) complex proteins (ATP5A, COXIV, UQCRC2, SDHB, NDUFS3), as well as down regulation of ETC complex gene expressions such as COXIV, ATP5F1 and NDUFS3 and antioxidant gene expressions like MnSOD and Gpx4 were observed in exposed cells. Furthermore, Pb and β-amyloid peptides exposure resulted in elevated mitochondrial malondialdehyde levels and a decrease in mitochondrial GSH levels. Our findings suggest that Pb toxicity could be one of the causative factors for the mitochondrial dysfunction and oxidative stress in Alzheimer's disease progression.

暴露于环境污染物铅(Pb)与阿尔茨海默病(AD)有关,其中线粒体功能障碍是神经元变性的病理结果。铅与β-淀粉样肽(1-40)和(25-35)联合的毒性导致神经元细胞选择性死亡。然而,铅诱发阿尔茨海默病,特别是线粒体损伤的确切机制尚不清楚。研究了单独和不同组合暴露于Pb和β-淀粉样肽(1-40)和(25-35)下的人源神经细胞线粒体质量、膜电位、线粒体复合体活性、线粒体DNA和氧化应激的变化。结果显示Pb和β-淀粉样肽(1-40)和(25-35)暴露的细胞线粒体膜电位去极化,线粒体质量、ATP水平和mtDNA拷贝数减少。此外,暴露细胞中线粒体电子传递链(ETC)复合体蛋白(ATP5A、COXIV、UQCRC2、SDHB、NDUFS3)表达显著降低,ETC复合体基因(COXIV、ATP5F1、NDUFS3)表达下调,抗氧化基因(MnSOD、Gpx4)表达下调。此外,铅和β-淀粉样肽暴露导致线粒体丙二醛水平升高和线粒体GSH水平降低。我们的研究结果提示铅中毒可能是阿尔茨海默病进展中线粒体功能障碍和氧化应激的致病因素之一。
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引用次数: 4
Separation and analysis of Bacillus subtilis respiratory chain complexes. 枯草芽孢杆菌呼吸链复合物的分离与分析。
IF 3 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-12-01 Epub Date: 2022-11-23 DOI: 10.1007/s10863-022-09951-6
Gerardo Ignacio Picón Garrido, Ana Paula García García, Luis González de la Vara, Alicia Chagolla-López, Carlos Gómez-Lojero, Emma Berta Gutiérrez-Cirlos

Bacillus subtilis is a Gram-positive bacterium with a respiratory chain embedded in the cytoplasmic membrane. The respiratory chain is bifurcated after menaquinol into a cytochrome b6c + caa3 branch and a branch with up to three quinol oxidases. The complexes that generate the proton gradient are b6c, associated with caa3 and aa3 oxidase. The b6c and caa3 complexes form a supercomplex, and it is proposed to form respiratory strings in the membrane. There is still information missing about the quinol branch and if the primary oxidase quinol aa3 is associated with the electron donor complexes. It is unclear whether succinate quinone reductase (SQR) can form associations with the quinol branch or the cytochrome branch. In this paper, we show the separation of an almost pure b6c complex associated with cytochromes c550 and c551. We obtained a b6c + caa3 supercomplex of 600 kDa and SQR, aa3, and NADH dehydrogenase by dodecyl maltoside solubilization and separation of the respiratory chain components by ionic exchange chromatography. We found that aa3 does not associate with other complexes. SQR was associated with the b6c complex in a mutant lacking aa3. This association could facilitate electron transfer from SQR to menaquinone-7. The lack of associations between the abundant quinol oxidase aa3 and other complexes is a feature we cannot explain yet.

枯草芽孢杆菌是一种革兰氏阳性细菌,其呼吸链嵌入细胞质膜。呼吸链在甲基萘酚后分叉成细胞色素b6c + caa3分支和含有多达3个喹啉氧化酶的分支。产生质子梯度的配合物是b6c,与caa3和aa3氧化酶结合。b6c和caa3配合物形成超配合物,并提出在膜内形成呼吸弦。关于喹啉分支和初级氧化酶喹啉aa3是否与电子给体配合物相关联的信息仍然缺失。琥珀酸醌还原酶(SQR)是否与醌分支或细胞色素分支形成关联尚不清楚。在本文中,我们展示了与细胞色素c550和c551相关的几乎纯净的b6c复合物的分离。通过十二烷基麦糖苷增溶和离子交换色谱分离呼吸链组分,得到了600 kDa的b6c + caa3超配合物和SQR、aa3和NADH脱氢酶。我们发现aa3不与其他复合物结合。在缺乏aa3的突变体中,SQR与b6c复合物相关。这种结合可以促进电子从SQR到甲基萘醌-7的转移。丰富的喹啉氧化酶aa3和其他复合物之间缺乏关联是一个我们还无法解释的特征。
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引用次数: 3
Isolation and characterization of a main porin from the outer membrane of Salinibacter ruber. 橡胶盐杆菌外膜主要孔蛋白的分离与表征。
IF 3 4区 生物学 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2022-12-01 Epub Date: 2022-10-13 DOI: 10.1007/s10863-022-09950-7
Domenica Farci, Emma Cocco, Marta Tanas, Joanna Kirkpatrick, Andrea Maxia, Elena Tamburini, Wolfgang P Schröder, Dario Piano

Salinibacter ruber is an extremophilic bacterium able to grow in high-salts environments, such as saltern crystallizer ponds. This halophilic bacterium is red-pigmented due to the production of several carotenoids and their derivatives. Two of these pigment molecules, salinixanthin and retinal, are reported to be essential cofactors of the xanthorhodopsin, a light-driven proton pump unique to this bacterium. Here, we isolate and characterize an outer membrane porin-like protein that retains salinixanthin. The characterization by mass spectrometry identified an unknown protein whose structure, predicted by AlphaFold, consists of a 8 strands beta-barrel transmembrane organization typical of porins. The protein is found to be part of a functional network clearly involved in the outer membrane trafficking. Cryo-EM micrographs showed the shape and dimensions of a particle comparable with the ones of the predicted structure. Functional implications, with respect to the high representativity of this protein in the outer membrane fraction, are discussed considering its possible role in primary functions such as the nutrients uptake and the homeostatic balance. Finally, also a possible involvement in balancing the charge perturbation associated with the xanthorhodopsin and ATP synthase activities is considered.

橡胶盐杆菌是一种嗜极细菌,能够在高盐环境中生长,如盐碱结晶池。这种嗜盐细菌由于产生几种类胡萝卜素及其衍生物而呈红色。据报道,这些色素分子中的两种,盐黄质和视网膜,是这种细菌特有的一种光驱动质子泵——黄质必不可少的辅助因子。在这里,我们分离并表征了一种保留盐黄素的外膜孔蛋白样蛋白。质谱鉴定鉴定出一种未知蛋白,其结构由AlphaFold预测,由典型的8股-桶状跨膜组织组成。该蛋白被发现是参与外膜运输的功能网络的一部分。低温电子显微镜显示了粒子的形状和尺寸与预测结构相当。考虑到该蛋白在营养摄取和体内平衡等主要功能中的可能作用,我们讨论了其在外膜部分中具有高代表性的功能含义。最后,也可能参与平衡与黄嘌呤紫质和ATP合成酶活性相关的电荷扰动。
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Journal of Bioenergetics and Biomembranes
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