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Implementing generative artificial intelligence in precision oncology: safety, governance, and significance. 在精准肿瘤学中实施生成式人工智能:安全性、治理和意义。
IF 40.4 1区 医学 Q1 HEMATOLOGY Pub Date : 2026-02-09 DOI: 10.1186/s13045-026-01781-y
Ryuji Hamamoto, Takafumi Koyama, Satoshi Takahashi, Tomohiro Yasuda, Kazuma Kobayashi, Yu Akagi, Nobuji Kouno, Kazuki Sudo, Makoto Hirata, Kuniko Sunami, Takashi Kubo, Hiroshi Katayama, Atsuo Takashima, Tomonori Taniguchi, Hiromi Matsumoto, Ryota Shibaki, Ken Asada, Masaaki Komatsu, Syuzo Kaneko, Masayoshi Yamada, Hidehito Horinouchi, Katsuya Tanaka, Yasushi Goto, Ken Kato, Yutaka Saito, Kenichi Nakamura, Noboru Yamamoto

The paramount challenge in precision oncology lies in further improving quality of life and response rates for individual patients. Efforts toward these goals are steadily expanding the scope of clinical implementation, despite ongoing challenges such as standardization, cost-effectiveness, and data harmonization. Building upon this maturing foundation, generative AI-which has evolved dramatically in recent years-is particularly valuable at this stage of advancing efficiency and adoption as an auxiliary technology linking literature, guidelines, trial protocols, and patient data. Specifically, through mutation interpretation, trial eligibility matching, and tumor board support, it is expected to contribute to advancing standardization, improving cost-effectiveness, accelerating data harmonization, and further accelerating human-centered decision-making. Accordingly, this review surveys the development history of generative AI and its current healthcare applications, organizing its implementation potential for precision oncology along three axes: (1) generative AI-based interpretation of genetic mutations and estimation of their pathological significance; (2) generative AI-driven verification of clinical trial eligibility; and (3) multimodal foundation models for imaging and pathology that compute "tumor phenotypes" using real-world data, contributing to report drafting and molecular surrogate estimation. In response, we propose a strategy centered on retrieval-augmented generation (RAG) and human-in-the-loop (HITL) workflows, encompassing data preparation based on OMOP, mCODE, and FHIR; multicenter prospective evaluation; auditable logs and governance aligned with Good Manufacturing Practice (GMP) and the EU AI Act; and a synthetic data strategy including differential privacy. Ultimately, this approach validates value through real-world outcomes and charts a path toward "learning oncology," accelerating patient-centered decision-making and clinical trial development.

精准肿瘤学的最大挑战在于进一步提高个体患者的生活质量和反应率。尽管存在标准化、成本效益和数据协调等挑战,但实现这些目标的努力正在稳步扩大临床实施的范围。在这一成熟的基础上,近年来发生了巨大变化的生成式人工智能,作为一种连接文献、指南、试验方案和患者数据的辅助技术,在提高效率和采用的现阶段尤其有价值。具体来说,通过突变解释、试验资格匹配和肿瘤委员会的支持,预计将有助于推进标准化、提高成本效益、加速数据协调,并进一步加快以人为本的决策。因此,本文综述了生成式人工智能的发展历史及其当前的医疗保健应用,并从三个方面组织了其在精确肿瘤学中的实施潜力:(1)基于生成式人工智能的基因突变解释和其病理意义的估计;(2)生成式人工智能驱动的临床试验资格验证;(3)使用真实世界数据计算“肿瘤表型”的成像和病理多模态基础模型,有助于报告起草和分子替代估计。为此,我们提出了一种以检索增强生成(RAG)和人在环(HITL)工作流为中心的策略,包括基于OMOP、mCODE和FHIR的数据准备;多中心前瞻性评价;符合良好生产规范(GMP)和欧盟人工智能法案的可审计日志和治理;以及一种综合数据策略,包括差异化隐私。最终,这种方法通过现实世界的结果验证了价值,并为“学习肿瘤学”指明了道路,加速了以患者为中心的决策和临床试验的发展。
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引用次数: 0
Lung cancer vaccines to enhance immune checkpoint inhibitor therapy: evidence and future perspectives. 肺癌疫苗增强免疫检查点抑制剂治疗:证据和未来展望
IF 40.4 1区 医学 Q1 HEMATOLOGY Pub Date : 2026-02-03 DOI: 10.1186/s13045-026-01778-7
Zhiting Tang, Linjun Zha, Ruqiang Liang, Tianhong Li

Immune checkpoint inhibitors (ICIs) have transformed the treatment landscape of lung cancer over the past decade, markedly improving antitumor responses, overall survival, and quality of life. However, durable clinical benefit is achieved in only a subset of patients, and resistance to ICIs remains a major clinical challenge. Mechanistically, resistance arises from multiple, often overlapping processes, including inadequate tumor antigen presentation, dysfunctional T-cell priming and expansion, and the presence of physical and immunosuppressive barriers within the tumor microenvironment that limit immune cell infiltration and effector function. Cancer vaccines have re-emerged as a rational immunotherapeutic strategy to overcome these obstacles by inducing de novo or amplifying pre-existing tumor-specific immune responses, thereby enhancing long-term immunological memory while maintaining a favorable safety profile. Advances in antigen discovery, neoantigen prediction, and vaccine platforms have accelerated the development of both personalized and off-the-shelf neoantigen vaccines. Although personalized neoantigen vaccines have gained considerable attention following the success of mRNA-based COVID-19 vaccines, off-the-shelf approaches offer advantages in scalability, cost, and manufacturing timelines, facilitating broader clinical implementation. Accumulating preclinical and clinical evidence suggests that cancer vaccines are more effective in the adjuvant setting than in the metastatic setting, where high tumor burden and an immunosuppressive tumor microenvironment constrain vaccine-induced immune responses. Consistent with their limited efficacy as monotherapy, contemporary clinical trials increasingly evaluate cancer vaccines in combination with ICIs or other immunotherapeutic agents to enhance T-cell activation, reverse immune suppression, and restore antitumor immunity. This review synthesizes current mechanistic insights, highlights ongoing clinical efforts, and discusses future directions for rational cancer vaccine development in lung cancer, with an emphasis on overcoming resistance to ICI.

在过去的十年里,免疫检查点抑制剂(ICIs)已经改变了肺癌的治疗前景,显著提高了抗肿瘤反应、总生存期和生活质量。然而,持久的临床获益仅在一小部分患者中实现,并且对ICIs的耐药性仍然是一个主要的临床挑战。从机制上讲,耐药性产生于多个经常重叠的过程,包括肿瘤抗原呈递不足、t细胞启动和扩增功能失调,以及肿瘤微环境中存在限制免疫细胞浸润和效应功能的物理和免疫抑制屏障。癌症疫苗作为一种合理的免疫治疗策略重新出现,通过诱导新生或放大已有的肿瘤特异性免疫反应来克服这些障碍,从而增强长期免疫记忆,同时保持良好的安全性。抗原发现、新抗原预测和疫苗平台的进步加速了个性化和现成新抗原疫苗的发展。尽管在基于mrna的COVID-19疫苗取得成功之后,个性化新抗原疫苗获得了相当大的关注,但现成的方法在可扩展性、成本和制造时间表方面具有优势,有助于更广泛的临床实施。越来越多的临床前和临床证据表明,癌症疫苗在佐剂情况下比在转移性情况下更有效,在转移性情况下,高肿瘤负荷和免疫抑制性肿瘤微环境限制了疫苗诱导的免疫反应。与单一治疗的有限疗效一致,当代临床试验越来越多地评估癌症疫苗与ICIs或其他免疫治疗剂联合使用,以增强t细胞活化,逆转免疫抑制,恢复抗肿瘤免疫。这篇综述综合了目前的机制见解,强调了正在进行的临床努力,并讨论了合理的肺癌疫苗开发的未来方向,重点是克服对ICI的耐药性。
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引用次数: 0
BCMA-CD19 armored compound CAR T cells in systemic lupus erythematosus: extended follow-up of a phase 1 clinical trial. BCMA-CD19装甲复合CAR - T细胞治疗系统性红斑狼疮:1期临床试验的延长随访
IF 28.5 1区 医学 Q1 HEMATOLOGY Pub Date : 2026-01-29 DOI: 10.1186/s13045-026-01779-6
Ming Hong,Mingxia Wang,Ronghao Zeng,Ling Ding,Shanzhi He,Ting Lan,Vincent M DeStefano,Masayuki Wada,Kevin Pinz,Jennifer E Chow,Byeong Hyeok Choi,Nabil Hagag,Min Wang,Yu Ma,Jing Luo,Yingwen Liang,Shihao Ding,Ziji Lu,Wenli Zhang,Yupo Ma,Weijia Wang
CD19 CAR T-cells have shown promise in treating systemic lupus erythematosus (SLE), however, relapses demonstrate persistently elevated autoantibodies characteristic of CD19-negative long-lived plasma cells (LLPCs). Alternatively, ICG318, a dual-targeting BCMA-CD19 armored CAR T-cell therapy, targets both B cells and plasma cells/LLPCs driving SLE which may improve outcomes. Herein, we present 12 patients with refractory SLE, including 10 with lupus nephritis (LN), who received ICG318 CAR T-cells resulting in 10 of 12 achieving stringent complete remission (sCR) defined by medication-free DORIS CR and complete renal response (CRR). Eleven of 12 achieved drug-free, serological CR. Nine patients underwent repeat renal biopsy demonstrating evidence of remarkable histological improvement with clearance of immune-complex deposits and resolution of chronic glomerular injury. The safety profile was favorable, with no high-grade cytokine release syndrome or neurotoxicity. Notably, successful spontaneous pregnancies and births of healthy full-term infants occurred post-treatment, warranting future study of fertility outcomes. sCR approaching 6 years raises the possibility of a long-term durable response to CAR T-cell therapy in humoral autoimmune disease.
CD19 CAR - t细胞已经显示出治疗系统性红斑狼疮(SLE)的希望,然而,复发表现出CD19阴性长寿命浆细胞(LLPCs)特征的持续升高的自身抗体。另外,ICG318是一种双靶向BCMA-CD19装甲CAR -t细胞疗法,可同时靶向驱动SLE的B细胞和浆细胞/ llpc,可能改善预后。在此,我们报告了12例难治性SLE患者,其中包括10例狼疮肾炎(LN)患者,他们接受了ICG318 CAR - t细胞治疗,12例患者中有10例达到严格的完全缓解(sCR),由无药物DORIS CR和完全肾反应(CRR)定义。12名患者中有11名实现了无药物、血清学CR。9名患者进行了重复肾活检,显示出明显的组织学改善,免疫复合物沉积物清除,慢性肾小球损伤消退。安全性良好,无高级别细胞因子释放综合征或神经毒性。值得注意的是,治疗后成功的自然怀孕和健康足月婴儿的出生,保证了未来对生育结果的研究。sCR接近6年提高了CAR -t细胞治疗在体液性自身免疫性疾病中产生长期持久反应的可能性。
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引用次数: 0
CBX3 confers ferroptosis resistance during blood-borne metastasis. CBX3在血源性转移过程中赋予铁下垂抗性。
IF 28.5 1区 医学 Q1 HEMATOLOGY Pub Date : 2026-01-15 DOI: 10.1186/s13045-025-01777-0
Chun Wu,Xuefei Liu,Boxi Zhao,Mao Zhao,Binyu Zhang,Guanyin Huang,Yixin Cheng,Shuqian Zheng,Jianyang Hu,Ling Guo,Weinan Guo,Jun Tan,Xin Hong
The survival mechanisms of circulating tumor cells (CTCs) remain poorly understood while these rare cell populations transit through the blood stream and colonize distant organs including the brain. Using single-cell RNA-seq of microfluidically-enriched CTCs and patient-matched brain metastatic tumor cells of lung adenocarcinoma (LUAD), we revealed CTC-selective upregulation of core gene signatures associated with ferroptosis. The malignancy of CTCs was confirmed through comparative genomic instability and copy number variation (CNV) analyses of paired CTCs and metastatic tumor cells using both transcriptomic and whole-exome sequencing. Among the transcription factors elevated in CTCs, Chromobox 3 (CBX3) was the top hit, which was tightly correlated with GPX4 expression. Functionally, CBX3 co-operated with EP300 to protect CTCs from ferroptosis by upregulating GPX4 expression. Genetic depletion of CBX3 triggered ferroptosis and substantially reduced tumor cell survival and invasiveness in two independent cancer cell models. Conversely, CBX3 overexpression was sufficient to promote tumor growth, migration, and invasion in vitro, and metastatic progression in vivo. Clinically, CBX3 expression was significantly correlated with TNM stage and was predictive of both progression-free interval and overall survival in LUAD. In a prospective cohort of LUAD and melanoma patients, CTCs co-expressing CBX3 and GPX4 were selectively elevated in the blood samples of metastatic cases compared to the non-metastatic group, highlighting the clinical association between ferroptosis-resistant CTCs and metastatic progression.
循环肿瘤细胞(CTCs)的生存机制仍然知之甚少,而这些罕见的细胞群通过血液转运并定植到远处的器官,包括大脑。通过对微流富集的ctc和患者匹配的肺腺癌(LUAD)脑转移瘤细胞进行单细胞rna测序,我们发现ctc选择性上调与铁凋亡相关的核心基因特征。通过使用转录组和全外显子组测序对配对的ctc和转移性肿瘤细胞进行比较基因组不稳定性和拷贝数变异(CNV)分析,证实了ctc的恶性性。CTCs中升高的转录因子中,Chromobox 3 (CBX3)的表达最高,与GPX4的表达密切相关。在功能上,CBX3通过上调GPX4的表达,与EP300共同保护ctc免于铁凋亡。在两种独立的癌细胞模型中,CBX3基因缺失引发铁下垂,并显著降低肿瘤细胞存活率和侵袭性。相反,CBX3过表达足以促进肿瘤在体外的生长、迁移和侵袭,以及体内的转移进展。在临床上,CBX3表达与TNM分期显著相关,可预测LUAD患者的无进展期和总生存期。在LUAD和黑色素瘤患者的前瞻性队列中,与非转移组相比,转移病例血液样本中共表达CBX3和GPX4的ctc选择性升高,突出了耐铁性ctc与转移进展之间的临床关联。
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引用次数: 0
Patterns, risk factors and management of CD19-directed chimeric antigen receptor T-cell therapy failure in CNS lymphoma. cd19靶向嵌合抗原受体t细胞治疗中枢神经系统淋巴瘤失败的模式、危险因素和管理。
IF 28.5 1区 医学 Q1 HEMATOLOGY Pub Date : 2026-01-14 DOI: 10.1186/s13045-025-01761-8
Leon D Kaulen,Philipp Karschnia,Sofia Doubrovinskaia,Jeremy S Abramson,Jacob D Soumerai,Maria Martinez-Lage,J Erika Haydu,Ganesh M Shankar,Chirayu Patel,Bryan D Choi,Jeffrey A Barnes,Areej El-Jawahri,Ephraim P Hochberg,P Connor Johnson,Wolfgang Wick,Marcela V Maus,Yi-Bin Chen,Matthew J Frigault,Jorg Dietrich
BACKGROUNDCD19-directed chimeric antigen receptor T-cell therapy (CD19-CAR) has yielded encouraging efficacy in CNS lymphomas (CNSL), but most patients ultimately experience progressive disease (PD). Risk factors, progression patterns as well as optimal salvage therapies remain unclear.METHODSClinical and radiological characteristics of CD19-CAR failure were therefore retrospectively defined in CNSL treated at Massachusetts General Hospital from 2018 to 2024. PD patterns were defined as local or distant. CNS-progression-free survival from CD19-CAR infusion (CNS-PFS1) and first subsequent progression (CNS-PFS2) were analyzed.RESULTSCD19-CAR achieved a 60% overall response rate (45% complete (CR), 15% partial response) in 60 recurrent CNSL. Median CNS-PFS1 was 4 months with radiographic PD in 36 patients (local 23.3%; local and distant 16.7%; distant 20%). PD patterns were associated with prior CD19-CAR response: Distant relapse typically occurred after CR whereas local PD followed CD19-CAR refractory disease. Peripherally contrast enhancing CNSL (pCE) at CD19-CAR infusion correlated with refractory disease. Leptomeningeal involvement (LMD) was associated with recurrence after CR. On multivariable Cox regression, pCE (Hazard ratio [HR]: 2.75; 95%-Confidence interval [CI]: 1.08-6.68, p = 0.03) and LMD (HR: 2.72; CI: 1.20-6.25, p = 0.02) were independently associated with shorter CNS-PFS1. At progression, peripheral CD19+-B-cell aplasia suggested CD19-CAR persistence in 93% of patients. Median CNS-PFS2 after CD19-CAR failure was one month. Salvage immune checkpoint inhibition, and lenalidomide with rituximab/tafasitamab yielded prolonged responses.CONCLUSIONSThis study identifies novel radiological risk factors for CD19-CAR failure in CNSL, namely pCE and LMD. Outcome in this setting is unfavorable and encouraging salvage treatments warrant prospective evaluation.
cd19靶向嵌合抗原受体t细胞疗法(CD19-CAR)在中枢神经系统淋巴瘤(CNSL)中取得了令人鼓舞的疗效,但大多数患者最终经历了疾病的进展(PD)。风险因素、进展模式以及最佳抢救疗法仍不清楚。方法回顾性分析2018年至2024年在马萨诸塞州总医院治疗的CNSL患者CD19-CAR失败的临床和影像学特征。PD模式被定义为局部或远处。分析CD19-CAR输注后无进展生存期(CNS-PFS1)和首次后续进展期(CNS-PFS2)。结果scd19 - car在60例复发性CNSL中达到60%的总缓解率(45%完全缓解,15%部分缓解)。36例患者中位CNS-PFS1为4个月,伴有影像学上的PD(局部23.3%,局部和远处16.7%,远处20%)。PD模式与先前的CD19-CAR反应相关:远处复发通常发生在CR后,而局部PD则发生在CD19-CAR难治性疾病之后。CD19-CAR输注时外周造影剂增强CNSL (pCE)与难治性疾病相关。在多变量Cox回归中,pCE(风险比[HR]: 2.75; 95%可信区间[CI]: 1.08-6.68, p = 0.03)和LMD(风险比:2.72;CI: 1.20-6.25, p = 0.02)与较短的CNS-PFS1独立相关。在进展阶段,外周血CD19+- b细胞发育不全表明93%的患者CD19- car持续存在。CD19-CAR失败后中位CNS-PFS2为1个月。挽救免疫检查点抑制,来那度胺联合利妥昔单抗/他法西他单抗产生了延长的反应。本研究确定了CNSL中CD19-CAR失败的新的放射危险因素,即pCE和LMD。在这种情况下的结果是不利的,鼓励挽救治疗需要前瞻性评估。
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引用次数: 0
Molecularly targeted therapy and immunotherapy in leukemias. 白血病的分子靶向治疗和免疫治疗。
IF 28.5 1区 医学 Q1 HEMATOLOGY Pub Date : 2026-01-11 DOI: 10.1186/s13045-025-01775-2
Elie Cousin,Agathe Picard,Maria Oundjian,Nina Tardif,Anaïs Quemener,Anne-Gaëlle Rio,Marie-Dominique Galibert,Virginie Gandemer,Frédéric Mazurier
The advent of next-generation high-throughput sequencing and precision medicine has allowed the identification of recurrent genetic events of vital interest for leukemic cells and for the management of patients with leukemia, since it has a direct impact on prognosis and therapeutic stratification. The precise cytogenetic characterization of these diseases has rapidly enabled the development of innovative therapeutic strategies to improve outcomes and limit toxicities. New targeted therapies, including small molecule inhibitors, monoclonal antibodies, bispecific T cell engagers, antibody-drug conjugates, recombinant immunotoxins, and chimeric antigen receptor T cells (CAR-T cells) represent a broad therapeutic arsenal now available in everyday practice. The growing number of treatments means that many possibilities of drugs and combinations can be used to offer new lines of therapy in cases of refractory disease or relapse, but also in frontline treatment. This review provides a broad overview of pathogenic mechanisms and therapies (including targeted therapies, immunotherapy and RNA-based therapy) and gathers the main research progress in the field of leukemia.
下一代高通量测序和精准医学的出现,使得白血病细胞和白血病患者管理至关重要的复发性遗传事件得以识别,因为它对预后和治疗分层有直接影响。这些疾病的精确细胞遗传学特征已迅速使创新治疗策略的发展,以改善结果和限制毒性。新的靶向治疗,包括小分子抑制剂、单克隆抗体、双特异性T细胞接合物、抗体-药物偶联物、重组免疫毒素和嵌合抗原受体T细胞(CAR-T细胞),代表了一种广泛的治疗武库,现在在日常实践中可用。越来越多的治疗方法意味着多种药物和组合的可能性可用于难治性疾病或复发的情况下提供新的治疗方法,也可用于一线治疗。本文综述了白血病的发病机制和治疗方法(包括靶向治疗、免疫治疗和基于rna的治疗),并收集了白血病领域的主要研究进展。
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引用次数: 0
Clinical validation of UroCAD test for upper tract urothelial carcinoma detection: results from a prospective multi-center study. UroCAD检测上尿路上皮癌的临床验证:来自一项前瞻性多中心研究的结果
IF 40.4 1区 医学 Q1 HEMATOLOGY Pub Date : 2026-01-09 DOI: 10.1186/s13045-025-01772-5
Guoliang Yang, Shuxiong Zeng, Wei He, Lianhua Zhang, Chuanliang Xu, Jiahua Pan, Wei Xue

Background: Upper tract urothelial carcinoma (UTUC) poses diagnostic challenges due to its anatomical complexity and limited accessibility.

Methods: This prospective multicenter study (NCT05043662) evaluated the diagnostic performance of UroCAD, a novel non-invasive assay based on chromosomal copy number variation (CNV) analysis, in 244 patients with suspected UTUC or benign upper urinary tract conditions.

Results: Urine samples were analyzed for arm-level chromosomal aberrations (|Z-score|≥ 3.21), with histopathology as the reference standard. UroCAD demonstrated excellent diagnostic accuracy: sensitivity 91.0%, specificity 97.0%, and overall accuracy 93.4%. Performance was consistent across tumor locations (renal pelvis: 96.8%, ureter: 86.4%) and grades (high-grade: 93.5%, low-grade: 76.2%). Compared to urine cytology, UroCAD showed significantly higher sensitivity (91.2% vs. 52.9%, P < 0.001). CNV profiling revealed grade-associated patterns, with high-grade tumors frequently exhibiting amplifications on 1q and 8q. The extent (MaxZ) and number (CountZ) of chromosomal alterations correlated positively with tumor grade, supporting UroCAD's potential utility in molecular grading.

Conclusions and clinical implications: The UroCAD test demonstrates robust diagnostic performance for UTUC detection with high specificity and high sensitivity. The consistent performance across various clinical scenarios and the identification of specific chromosomal alteration patterns support its potential as a valuable clinical tool for both initial diagnosis and treatment monitoring. These findings warrant larger-scale validation studies to confirm its utility in routine clinical practice.

背景:上尿路上皮癌(UTUC)由于其解剖复杂性和有限的可及性,给诊断带来了挑战。方法:这项前瞻性多中心研究(NCT05043662)评估了UroCAD(一种基于染色体拷贝数变异(CNV)分析的新型无创检测方法)对244例疑似UTUC或良性上尿路疾病患者的诊断效果。结果:以组织病理学为参考标准,分析尿样中臂位染色体畸变(|Z-score|≥3.21)。UroCAD表现出良好的诊断准确性:敏感性91.0%,特异性97.0%,总准确率93.4%。不同肿瘤部位(肾盂:96.8%,输尿管:86.4%)和肿瘤级别(高级别:93.5%,低级别:76.2%)的表现一致。结论及临床意义:UroCAD检测对UTUC检测具有高特异性和高敏感性,具有较强的诊断能力。在各种临床情况下的一致表现和特定染色体改变模式的识别支持其作为初始诊断和治疗监测的有价值的临床工具的潜力。这些发现需要更大规模的验证研究来证实其在常规临床实践中的效用。
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引用次数: 0
A subcellular spatial atlas illuminates the microenvironmental remodeling of perineural invasion in distal cholangiocarcinoma. 亚细胞空间图谱揭示了远端胆管癌神经周围浸润的微环境重塑。
IF 40.4 1区 医学 Q1 HEMATOLOGY Pub Date : 2026-01-08 DOI: 10.1186/s13045-025-01773-4
Fansen Ji, Hao Chen, Huan Li, Jiawei Zhang, Sijia Li, Pengfei Wang, Hao Liu, Cui Ge, Bingjun Tang, Hongfang Yin, Xuedong Wang, Jiahong Dong

Distal cholangiocarcinoma (dCCA) arises from the distal bile duct and is anatomically embedded within the pancreatic head, adjacent to abundant autonomic nerve plexuses. This unique location renders dCCA particularly prone to perineural invasion (PNI), a pathological hallmark that contributes to its dismal prognosis. However, the spatial architecture and molecular drivers that orchestrate PNI remain poorly defined. Here, we applied Xenium subcellular resolution spatial transcriptomics platform to profile resected tumor tissues from dCCA patients stratified by PNI status pathologically. A spatially resolved atlas comprising a total of 20 cell types was generated, uncovering enrichment of Schwann cells, type 2 conventional dendritic cells (cDC2), M2-like macrophages, cancer associated fibroblasts (CAFs) and B/plasma cells in PNI-high tumors, along with depletion of exhausted CD8+ T cells. Heterogeneous malignant cells in PNI-high tumors demonstrated activation of extracellular matrix remodeling and axonogenesis pathways, in line with the initial pathological classification. Spatial mapping further revealed distinct PNI-associated niches, notably matrix-producing CAFs (mCAFs)-macrophage clusters exhibiting coordinated enrichment of inflammatory and fibrotic programs. We further identified the LAMB3-DAG1 axis as a potential mediator of dCCA cells-Schwann cell interaction, while the preferential proximity of arteries to Schwann cells suggested additional microenvironmental support for nerve invasion. Collectively, our study provides a comprehensive subcellular atlas of PNI in dCCA, uncovering coordinated epithelial, stromal, and immune remodeling that drives perineural invasion. The identified biomarkers not only hold promise for patient stratification but may also guide intraoperative navigation and surgical margin determination, offering new avenues for precision therapy.

远端胆管癌(dCCA)起源于远端胆管,解剖上嵌入胰头,邻近丰富的自主神经丛。这种独特的位置使得dCCA特别容易发生神经周围浸润(PNI),这是导致其预后不佳的病理标志。然而,协调PNI的空间结构和分子驱动因素仍然不明确。在这里,我们应用Xenium亚细胞分辨率空间转录组学平台对按PNI状态分层的dCCA患者的切除肿瘤组织进行病理分析。生成了包含20种细胞类型的空间分辨率图谱,揭示了在pni高的肿瘤中,雪旺细胞、2型常规树突状细胞(cDC2)、m2样巨噬细胞、癌症相关成纤维细胞(CAFs)和B/浆细胞的富集,以及耗尽的CD8+ T细胞的耗竭。高pni肿瘤的异质性恶性细胞表现出细胞外基质重塑和轴突生成途径的激活,与最初的病理分类一致。空间映射进一步揭示了不同的pni相关生态位,特别是基质生成CAFs (mCAFs)-巨噬细胞簇,表现出炎症和纤维化程序的协调富集。我们进一步确定LAMB3-DAG1轴是dCCA细胞-雪旺细胞相互作用的潜在介质,而动脉与雪旺细胞的优先接近表明了对神经侵袭的额外微环境支持。总的来说,我们的研究提供了dCCA中PNI的全面亚细胞图谱,揭示了驱动神经周围侵袭的协调上皮、基质和免疫重塑。已确定的生物标志物不仅对患者分层有希望,而且可以指导术中导航和手术切缘确定,为精确治疗提供新的途径。
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引用次数: 0
Multicenter real-life evaluation of the Post-CAR prognostic index for patients with large B-cell lymphoma after CAR-T failure. CAR-T失败后大b细胞淋巴瘤患者CAR-T后预后指标的多中心现实评估
IF 40.4 1区 医学 Q1 HEMATOLOGY Pub Date : 2026-01-08 DOI: 10.1186/s13045-025-01771-6
Mirko Farina, Elena Maiolo, Chiara Ghiggi, Piera Angelillo, Mattia Novo, Francesca Maria Quaglia, Luana Schiattone, Marta Lisa Battista, Lara Mannelli, Valeria Tomarchio, Elisa Lucchini, Luca Pagliaro, Greta Scapinello, Miriam Marangon, Sabrina Pelliccia, Roberta Sciarra, Domenico Russo, Francesco Zaja

Most patients with large B-cell lymphoma (LBCL) progressing after CAR-T therapy experience poor survival and lack standardized treatment strategies. Prognostic tools are needed to guide decision-making at relapse. The Post-CAR Prognostic Index (PC-PI), recently proposed by Iacoboni et al., combines five routine clinical variables to stratify outcomes after CAR-T failure: ECOG (> 0), hemoglobin (< 10 g/dL), LDH (≥ 2xULN), number of extranodal sites (> 1) and time from CAR-T to progression (< 4 months). We evaluated the PC-PI in a retrospective multicenter study including 125 LBCL patients relapsing or refractory after axicabtagene-ciloleucel or tisagenlecleucel, treated between 2019 and 2023 across 16 Italian centers belonging to the Fondazione Italiana Linfomi network. Median overall survival (OS) was 4.9 months, with 6- and 12-month OS rates of 44.9% and 28.5%, respectively. The PC-PI discriminated prognosis effectively: high-risk patients had a median OS of 1.8 months, intermediate-high 2.2, intermediate-low 8.7, while in the low-risk group median OS was not reached (p<0.0001). Results remained consistent after excluding patients receiving only palliative care. Post-progression therapy markedly influenced survival: patients receiving active treatment achieved a median OS of 7.3 months versus 0.7 without further therapy (p<0.0001). Bispecific antibodies conferred the best outcomes (HR 0.44, p=0.02), with 6- and 12-month OS rates of 90% and 55%. Our findings confirm the prognostic value of the PC-PI and support its use in clinical practice as a tool for risk-adapted management of LBCL after CAR-T failure.

大多数CAR-T治疗后进展的大b细胞淋巴瘤(LBCL)患者生存率较低,缺乏标准化的治疗策略。需要预后工具来指导复发时的决策。最近由Iacoboni等人提出的CAR-T后预后指数(PC-PI)结合了五个常规临床变量来对CAR-T失败后的结果进行分层:ECOG(>)、血红蛋白(1)和从CAR-T到进展的时间(
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引用次数: 0
Multiple myeloma risk linked to DNA damage response genes. 多发性骨髓瘤风险与DNA损伤反应基因有关。
IF 28.5 1区 医学 Q1 HEMATOLOGY Pub Date : 2026-01-06 DOI: 10.1186/s13045-025-01776-1
Michael Conry,Irina Ostrovnaya,Yelena Kemel,Saloni Sinha,Linda B Baughn,Brian Avery,Kylee Maclachlan,Victoria Groner,Lauren Banaszak,Aaron Norman,Nicholas J Boddicker,Alyssa Clay-Gilmour,Shaji Kumar,Ellen Kim,Sita Dandiker,Mitul Waghmare,Susan Slager,Douglas W Sborov,Judy Garber,Elizabeth E Brown,Michelle Hildebrandt,Parameshwaran Hari,Nicola Camp,Celine Vachon,Saad Usmani,Kenneth Offit,Vijai Joseph
BACKGROUNDDNA damage response genes (DDRG), implicated in several cancers as both predisposing risk factors as well as biomarkers for aggressiveness, have not been fully explored in multiple myeloma (MM).METHODSHerein, we analyzed disease associations of pathogenic variations in nine putative candidate genes using 3 446 MM cases and 323 233 cancer-free controls.RESULTSIncreased MM risk was found to be associated with inherited rare pathogenic mutations in TP53, ATM, CHEK2, KDM1A, and ARID1A, with an enrichment of these variants among individuals with early onset or family history of MM. Individuals with TP53 or ATM germline mutations are also likely to have worse overall survival.CONCLUSIONSOur results suggest expansion of the phenotypic spectrum of some of these DDRG to include MM. The identification of these germline predisposition genes opens the avenue for targeted screening of higher risk individuals especially those with young-onset or a family history of plasma cell gammopathies.
dna损伤反应基因(DDRG)与多种癌症有关,既是易感危险因素,也是侵袭性的生物标志物,但在多发性骨髓瘤(MM)中尚未得到充分研究。方法采用3 446例MM病例和323 233例无癌对照,分析9个候选基因的致病变异与疾病的相关性。结果发现MM风险增加与TP53、ATM、CHEK2、KDM1A和ARID1A的遗传性罕见致病性突变有关,这些变异在早期发病或有MM家族史的个体中富集。携带TP53或ATM种系突变的个体也可能有较差的总生存率。结论研究结果表明,部分DDRG的表型谱扩展到包括MM。这些种系易感基因的鉴定为有针对性地筛查高风险个体,特别是那些年轻发病或有浆细胞γ病家族史的个体开辟了道路。
{"title":"Multiple myeloma risk linked to DNA damage response genes.","authors":"Michael Conry,Irina Ostrovnaya,Yelena Kemel,Saloni Sinha,Linda B Baughn,Brian Avery,Kylee Maclachlan,Victoria Groner,Lauren Banaszak,Aaron Norman,Nicholas J Boddicker,Alyssa Clay-Gilmour,Shaji Kumar,Ellen Kim,Sita Dandiker,Mitul Waghmare,Susan Slager,Douglas W Sborov,Judy Garber,Elizabeth E Brown,Michelle Hildebrandt,Parameshwaran Hari,Nicola Camp,Celine Vachon,Saad Usmani,Kenneth Offit,Vijai Joseph","doi":"10.1186/s13045-025-01776-1","DOIUrl":"https://doi.org/10.1186/s13045-025-01776-1","url":null,"abstract":"BACKGROUNDDNA damage response genes (DDRG), implicated in several cancers as both predisposing risk factors as well as biomarkers for aggressiveness, have not been fully explored in multiple myeloma (MM).METHODSHerein, we analyzed disease associations of pathogenic variations in nine putative candidate genes using 3 446 MM cases and 323 233 cancer-free controls.RESULTSIncreased MM risk was found to be associated with inherited rare pathogenic mutations in TP53, ATM, CHEK2, KDM1A, and ARID1A, with an enrichment of these variants among individuals with early onset or family history of MM. Individuals with TP53 or ATM germline mutations are also likely to have worse overall survival.CONCLUSIONSOur results suggest expansion of the phenotypic spectrum of some of these DDRG to include MM. The identification of these germline predisposition genes opens the avenue for targeted screening of higher risk individuals especially those with young-onset or a family history of plasma cell gammopathies.","PeriodicalId":16023,"journal":{"name":"Journal of Hematology & Oncology","volume":"32 1","pages":""},"PeriodicalIF":28.5,"publicationDate":"2026-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145907673","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of Hematology & Oncology
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