Pub Date : 2026-01-20DOI: 10.1016/j.jpba.2026.117361
Domantas Sargautis, Bernd Thiede
Accurate characterization of the amino acid sequence and post translational modifications (PTMs) of monoclonal antibodies (mAbs) is essential for evaluating product quality. Peptide mapping through bottom-up LC/MS analysis is a key methodology for this purpose. While trypsin is commonly the first choice for mAb digestion, it typically yields high but incomplete sequence coverage. As a result, supplementary endoproteases such as Asp-N, chymotrypsin, Glu-C or Lys-C are often employed to enhance coverage. In this report, we evaluated another endoprotease, Tryp-N, which serves as an effective alternative to trypsin for mAb analysis. The sequence coverages achieved for bevacizumab, cetuximab, NISTmAb, and trastuzumab with Tryp-N were comparable to that of trypsin, and the combination of both enzymes slightly improved overall sequence coverage. Notably, both trypsin and Tryp-N generated identical peptides beside the N- and C-terminal ends. The presence of a basic amino acid at opposite ends of the peptide often resulted in complementary sequence coverage of the MS2 of the same peptide sequences. These complementary ion series can be leveraged for precise localization of PTMs, as demonstrated in detail for deamidation, and oxidation sites as well as single amino acid variants (SAVs).
{"title":"LC-MS peptide mapping of monoclonal antibodies using the mirror proteases trypsin and Tryp-N","authors":"Domantas Sargautis, Bernd Thiede","doi":"10.1016/j.jpba.2026.117361","DOIUrl":"10.1016/j.jpba.2026.117361","url":null,"abstract":"<div><div>Accurate characterization of the amino acid sequence and post translational modifications (PTMs) of monoclonal antibodies (mAbs) is essential for evaluating product quality. Peptide mapping through bottom-up LC/MS analysis is a key methodology for this purpose. While trypsin is commonly the first choice for mAb digestion, it typically yields high but incomplete sequence coverage. As a result, supplementary endoproteases such as Asp-N, chymotrypsin, Glu-C or Lys-C are often employed to enhance coverage. In this report, we evaluated another endoprotease, Tryp-N, which serves as an effective alternative to trypsin for mAb analysis. The sequence coverages achieved for bevacizumab, cetuximab, NISTmAb, and trastuzumab with Tryp-N were comparable to that of trypsin, and the combination of both enzymes slightly improved overall sequence coverage. Notably, both trypsin and Tryp-N generated identical peptides beside the N- and C-terminal ends. The presence of a basic amino acid at opposite ends of the peptide often resulted in complementary sequence coverage of the MS2 of the same peptide sequences. These complementary ion series can be leveraged for precise localization of PTMs, as demonstrated in detail for deamidation, and oxidation sites as well as single amino acid variants (SAVs).</div></div>","PeriodicalId":16685,"journal":{"name":"Journal of pharmaceutical and biomedical analysis","volume":"272 ","pages":"Article 117361"},"PeriodicalIF":3.1,"publicationDate":"2026-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146024128","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-20DOI: 10.1016/j.jpba.2026.117366
Tasmin Ara Sultana , Diaa Shakleya , Dustin G. Brown , Patrick J. Faustino , Muhammad Ashraf , Ahmed Zidan
Understanding naloxone permeation is important for optimizing nasal delivery and supporting comparative assessment of nasal drug products. In this study, a stability-indicating LC–MS/MS method was developed and validated for the simultaneous quantification of naloxone and its related impurities, naloxone N-oxide and noroxymorphone, in in vitro permeation test receptor media. The validated method was applied to characterize naloxone permeation following cloud-based aerosol dosing across a synthetic Nuclepore Track-Etched membrane and a differentiated human EpiAirway™ mucociliary tissue model under finite-dose conditions. The analytical procedure demonstrated linearity over 0.25–20.0 ng/mL in Dulbecco’s Phosphate-Buffered Saline and Krebs–Ringer Bicarbonate Buffer, with acceptable accuracy and precision. No degradation products or additional impurities were detected in permeation samples, confirming the stability-indicating capability of the method. Naloxone exhibited rapid early-time permeation across the synthetic membrane, whereas transport across the epithelial tissue model was attenuated and plateaued, reflecting physiological barrier function. Integration of cloud-based aerosol delivery with a validated LC–MS/MS platform enables mechanistic evaluation of nasal naloxone permeation and provides a supportive in vitro framework for formulation characterization and comparative assessments.
{"title":"Biopharmaceutical assessment of naloxone permeation through human respiratory epithelial tissues: A chromatographic-mass spectrometric approach with cloud based aerosol dosing and delivery","authors":"Tasmin Ara Sultana , Diaa Shakleya , Dustin G. Brown , Patrick J. Faustino , Muhammad Ashraf , Ahmed Zidan","doi":"10.1016/j.jpba.2026.117366","DOIUrl":"10.1016/j.jpba.2026.117366","url":null,"abstract":"<div><div>Understanding naloxone permeation is important for optimizing nasal delivery and supporting comparative assessment of nasal drug products. In this study, a stability-indicating LC–MS/MS method was developed and validated for the simultaneous quantification of naloxone and its related impurities, naloxone N-oxide and noroxymorphone, in in vitro permeation test receptor media. The validated method was applied to characterize naloxone permeation following cloud-based aerosol dosing across a synthetic Nuclepore Track-Etched membrane and a differentiated human EpiAirway™ mucociliary tissue model under finite-dose conditions. The analytical procedure demonstrated linearity over 0.25–20.0 ng/mL in Dulbecco’s Phosphate-Buffered Saline and Krebs–Ringer Bicarbonate Buffer, with acceptable accuracy and precision. No degradation products or additional impurities were detected in permeation samples, confirming the stability-indicating capability of the method. Naloxone exhibited rapid early-time permeation across the synthetic membrane, whereas transport across the epithelial tissue model was attenuated and plateaued, reflecting physiological barrier function. Integration of cloud-based aerosol delivery with a validated LC–MS/MS platform enables mechanistic evaluation of nasal naloxone permeation and provides a supportive in vitro framework for formulation characterization and comparative assessments.</div></div>","PeriodicalId":16685,"journal":{"name":"Journal of pharmaceutical and biomedical analysis","volume":"272 ","pages":"Article 117366"},"PeriodicalIF":3.1,"publicationDate":"2026-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146024129","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-20DOI: 10.1016/j.jpba.2026.117364
Panpan Liu , Yiyi Shen , Mingyang Zhang , Zhiyuan Liu , Shuhui Wang , Zhiheng Liu , Nana Wang , Jiaying Zhang , Jing Li , Guanghui Qian , Chengyao Ma , Haitao Lv , Ying Liu
Kawasaki disease (KD) is an acute systemic vasculitis in children that can result in severe cardiac complications. This study utilized an integrated proteomic and metabolomic approach to explore molecular dynamics in cardiac tissue from a Candida albicans cell wall extract (CAWS)-induced KD mouse model. Echocardiography demonstrated significant left ventricular dysfunction in the CAWS group, as evidenced by reduced ejection fraction and fractional shortening, alongside histopathological signs of inflammatory cell infiltration. Multi-omics analysis revealed 206 differentially expressed metabolites (DEMs) and 155 differentially expressed proteins (DEPs) compared to PBS controls. Bioinformatics analysis highlighted substantial disturbances in glycerophospholipid metabolism, amino acid metabolism, fatty acid synthesis, and cofactor biosynthesis pathways, with concurrent upregulation of immune- and inflammation-related proteins. Integrated analysis revealed co-enrichment in cofactor biosynthesis, amino acid metabolism, and purine metabolism pathways, and a regulatory network of key molecules was established. These findings suggest that KD-induced cardiac injury involves significant metabolic reprogramming and immune-inflammatory activation, offering new insights into the pathogenesis and providing a theoretical basis for the development of biomarkers and therapeutic targets.
{"title":"Integrated metabolomic and proteomic analysis of cardiac tissues in a murine model of Kawasaki disease","authors":"Panpan Liu , Yiyi Shen , Mingyang Zhang , Zhiyuan Liu , Shuhui Wang , Zhiheng Liu , Nana Wang , Jiaying Zhang , Jing Li , Guanghui Qian , Chengyao Ma , Haitao Lv , Ying Liu","doi":"10.1016/j.jpba.2026.117364","DOIUrl":"10.1016/j.jpba.2026.117364","url":null,"abstract":"<div><div>Kawasaki disease (KD) is an acute systemic vasculitis in children that can result in severe cardiac complications. This study utilized an integrated proteomic and metabolomic approach to explore molecular dynamics in cardiac tissue from a Candida albicans cell wall extract (CAWS)-induced KD mouse model. Echocardiography demonstrated significant left ventricular dysfunction in the CAWS group, as evidenced by reduced ejection fraction and fractional shortening, alongside histopathological signs of inflammatory cell infiltration. Multi-omics analysis revealed 206 differentially expressed metabolites (DEMs) and 155 differentially expressed proteins (DEPs) compared to PBS controls. Bioinformatics analysis highlighted substantial disturbances in glycerophospholipid metabolism, amino acid metabolism, fatty acid synthesis, and cofactor biosynthesis pathways, with concurrent upregulation of immune- and inflammation-related proteins. Integrated analysis revealed co-enrichment in cofactor biosynthesis, amino acid metabolism, and purine metabolism pathways, and a regulatory network of key molecules was established. These findings suggest that KD-induced cardiac injury involves significant metabolic reprogramming and immune-inflammatory activation, offering new insights into the pathogenesis and providing a theoretical basis for the development of biomarkers and therapeutic targets.</div></div>","PeriodicalId":16685,"journal":{"name":"Journal of pharmaceutical and biomedical analysis","volume":"272 ","pages":"Article 117364"},"PeriodicalIF":3.1,"publicationDate":"2026-01-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146024695","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-19DOI: 10.1016/j.jpba.2026.117365
Zhuan Yang , Xiaoping Zhang , Bo Lv , Yunli Yu
Antibiotics have a profound impact on the overall taxonomic composition of gut microbiota. As gut microbiota influence host bile acids metabolism, changes in the composition of gut microbiota induced by antibiotics are certain to alter host bile acids profile. However, the differences in the effects of various antibiotics on bile acids metabolism and their associations with the impact on intestinal microbiota remain unelucidated. Here, investigation was conducted into how different antibiotics impact host intestinal bile acids metabolism via gut microbiota using in vivo study and multi-omics approaches. Four antibiotics (cefixime, clarithromycin, moxifloxacin and metronidazole) were used to treat normal rats for a short period (3 days), and then gut microbiota, intestinal bile acids profile, BSH and 7α-dehydroxylases activity mediated bile acid metabolism were measured. The results showed that bile acid metabolism in intestine was significantly altered along with the abundance change in bile acid-producing microbiota. It was found that moxifloxacin and metronidazole inhibited the transformation of primary BAs to secondary BAs in the intestine as compared to cefixime and clarithromycin, which was exposed to be associated with its regulation of Ruminococcaceae by Spearman’s correlation analysis (correlation with CDCA/LCA is r = -0.89, FDR<0.001 and CA/DCA is r = -0.708, FDR<0.01). The abundance of Ruminococcaceae in the gut decreased by 87 % after moxifloxacin intervention, while metronidazole completely suppressed the abundance of intestinal Ruminococcaceae. Further analysis revealed that Ruminococcaceae were most strongly associated with the activity of 7α-dehydroxylases (r = 0.701, FDR<0.001). Specifically, we found that Ruminococcus flavefaciens had the closest association with alterations in secondary bile acids (r < -0.68, FDR<0.01). Collectively, our research demonstrated that different antibiotics exerted varying impacts on the production of intestinal secondary bile acids, which was related to their differential effects on the gut microbiota. This work provides novel insights into the interplay between antibiotics and microbial metabolites.
{"title":"Analysis of gut microbiota and intestinal secondary bile acids metabolism in rats after short-term antibiotic treatment","authors":"Zhuan Yang , Xiaoping Zhang , Bo Lv , Yunli Yu","doi":"10.1016/j.jpba.2026.117365","DOIUrl":"10.1016/j.jpba.2026.117365","url":null,"abstract":"<div><div>Antibiotics have a profound impact on the overall taxonomic composition of gut microbiota. As gut microbiota influence host bile acids metabolism, changes in the composition of gut microbiota induced by antibiotics are certain to alter host bile acids profile. However, the differences in the effects of various antibiotics on bile acids metabolism and their associations with the impact on intestinal microbiota remain unelucidated. Here, investigation was conducted into how different antibiotics impact host intestinal bile acids metabolism via gut microbiota using in vivo study and multi-omics approaches. Four antibiotics (cefixime, clarithromycin, moxifloxacin and metronidazole) were used to treat normal rats for a short period (3 days), and then gut microbiota, intestinal bile acids profile, BSH and 7α-dehydroxylases activity mediated bile acid metabolism were measured. The results showed that bile acid metabolism in intestine was significantly altered along with the abundance change in bile acid-producing microbiota. It was found that moxifloxacin and metronidazole inhibited the transformation of primary BAs to secondary BAs in the intestine as compared to cefixime and clarithromycin, which was exposed to be associated with its regulation of <em>Ruminococcaceae</em> by Spearman’s correlation analysis (correlation with CDCA/LCA is r = -0.89, FDR<0.001 and CA/DCA is r = -0.708, FDR<0.01). The abundance of <em>Ruminococcaceae</em> in the gut decreased by 87 % after moxifloxacin intervention, while metronidazole completely suppressed the abundance of intestinal <em>Ruminococcaceae</em>. Further analysis revealed that <em>Ruminococcaceae</em> were most strongly associated with the activity of 7α-dehydroxylases (r = 0.701, FDR<0.001). Specifically, we found that <em>Ruminococcus flavefaciens</em> had the closest association with alterations in secondary bile acids (r < -0.68, FDR<0.01). Collectively, our research demonstrated that different antibiotics exerted varying impacts on the production of intestinal secondary bile acids, which was related to their differential effects on the gut microbiota. This work provides novel insights into the interplay between antibiotics and microbial metabolites.</div></div>","PeriodicalId":16685,"journal":{"name":"Journal of pharmaceutical and biomedical analysis","volume":"272 ","pages":"Article 117365"},"PeriodicalIF":3.1,"publicationDate":"2026-01-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146078999","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-17DOI: 10.1016/j.jpba.2026.117355
Sohan G. Jawarkar , Gayatri Amliyar , Nasir Khan, Pooja Dhakne, Megha Pillai, Shankha Dey, Jinal Ajabiya, Pinaki Sengupta
Trametinib is a selective MEK1/2 inhibitor approved for the treatment of various cancers. Stress testing of a drug is essential for understanding the stability profile and ensuring compliance with regulatory requirements during pharmaceutical development. To the best of our knowledge, only a few reports on stress testing of trametinib are available to date. Moreover, comprehensive reports on the stress testing of trametinib using LC-HRMS are not available in any literature. Therefore, the present study aimed to conduct stress studies on trametinib in accordance with ICH guidelines. The RP-HPLC stability-indicating analytical method was developed, and the stress degradation condition for trametinib was optimised. Chromatographic separation of trametinib and its degradation products was achieved on a Phenomenex Luna C18 column (250 × 4.6 mm, 5 µm) using a mobile phase consisting of 0.1 % formic acid in Milli-Q water and acetonitrile using gradient elution. The proposed method demonstrated excellent specificity, linearity, precision (RSD ≤ 0.09 %), and accuracy (99.78–101.38 %). Results indicate that trametinib exhibited high susceptibility to acidic and basic stress conditions, whereas it remained relatively stable under oxidative and thermal stress conditions. All degradation products were characterised using Orbitarp LC-HRMS in positive HESI mode (m/z 50–800 Da) for accurate mass determination and fragmentation pathway elucidation. In-silico toxicity prediction suggested that among the degradation products, neurotoxicity was the most consistently predicted endpoint with high confidence (≥70 %), followed by respiratory toxicity and immunotoxicity. Greenness evaluation using AGREE, Eco-Scale, and BAGI tools indicated a moderate environmental impact.
曲美替尼是一种选择性MEK1/2抑制剂,被批准用于治疗各种癌症。在药物开发过程中,药物压力测试对于了解药物的稳定性和确保符合法规要求至关重要。据我们所知,到目前为止,关于曲美替尼压力测试的报道很少。此外,在文献中没有使用LC-HRMS对曲美替尼进行压力测试的全面报道。因此,本研究旨在根据ICH指南对曲美替尼进行应激研究。建立了反相高效液相色谱稳定性指示分析方法,优化了曲美替尼的应力降解条件。采用Phenomenex Luna C18色谱柱(250 × 4.6 mm, 5 µm)对曲美替尼及其降解产物进行色谱分离,流动相为0.1 %甲酸- milliq水和乙腈,采用梯度洗脱。该方法具有良好的特异性、线性度、精密度(RSD≤0.09 %)和准确度(99.78 ~ 101.38 %)。结果表明,曲美替尼对酸性和碱性胁迫条件表现出较高的敏感性,而在氧化和热胁迫条件下保持相对稳定。所有降解产物均使用Orbitarp LC-HRMS在正HESI模式下(m/z 50-800 Da)进行表征,以准确测定质量和裂解途径。硅毒性预测表明,在降解产物中,神经毒性是最一致的预测终点,置信度高(≥70 %),其次是呼吸毒性和免疫毒性。使用AGREE、Eco-Scale和BAGI工具进行的绿色评价表明环境影响中等。
{"title":"Identification and characterization of trametinib degradation product employing Orbitrap LC-HRMS, and development of a robust, eco-friendly stability indicating method of analysis","authors":"Sohan G. Jawarkar , Gayatri Amliyar , Nasir Khan, Pooja Dhakne, Megha Pillai, Shankha Dey, Jinal Ajabiya, Pinaki Sengupta","doi":"10.1016/j.jpba.2026.117355","DOIUrl":"10.1016/j.jpba.2026.117355","url":null,"abstract":"<div><div>Trametinib is a selective MEK1/2 inhibitor approved for the treatment of various cancers. Stress testing of a drug is essential for understanding the stability profile and ensuring compliance with regulatory requirements during pharmaceutical development. To the best of our knowledge, only a few reports on stress testing of trametinib are available to date. Moreover, comprehensive reports on the stress testing of trametinib using LC-HRMS are not available in any literature. Therefore, the present study aimed to conduct stress studies on trametinib in accordance with ICH guidelines. The RP-HPLC stability-indicating analytical method was developed, and the stress degradation condition for trametinib was optimised. Chromatographic separation of trametinib and its degradation products was achieved on a Phenomenex Luna C18 column (250 × 4.6 mm, 5 µm) using a mobile phase consisting of 0.1 % formic acid in Milli-Q water and acetonitrile using gradient elution. The proposed method demonstrated excellent specificity, linearity, precision (RSD ≤ 0.09 %), and accuracy (99.78–101.38 %). Results indicate that trametinib exhibited high susceptibility to acidic and basic stress conditions, whereas it remained relatively stable under oxidative and thermal stress conditions. All degradation products were characterised using Orbitarp LC-HRMS in positive HESI mode (<em>m/z</em> 50–800 Da) for accurate mass determination and fragmentation pathway elucidation. <em>In-silico</em> toxicity prediction suggested that among the degradation products, neurotoxicity was the most consistently predicted endpoint with high confidence (≥70 %), followed by respiratory toxicity and immunotoxicity. Greenness evaluation using AGREE, Eco-Scale, and BAGI tools indicated a moderate environmental impact.</div></div>","PeriodicalId":16685,"journal":{"name":"Journal of pharmaceutical and biomedical analysis","volume":"272 ","pages":"Article 117355"},"PeriodicalIF":3.1,"publicationDate":"2026-01-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146018804","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-14DOI: 10.1016/j.jpba.2026.117362
Ashwini Chawathe , Nitish Sharma
Afamelanotide, also known as melanotan-1, is a synthetic 13-amino acid peptidomimetic of α-melanocyte stimulating hormone (α-MSH), and is a critical peptide orphan drug used for the management of erythropoietic protoporphyria. It contains norleucine and D-phenylalanine at positions 4 and 7, in place of methionine and L-phenylalanine, respectively as found in endogenous peptide. Therapeutic peptide stability profiling is crucial in drug development because chemical and physical degradation during storage alters structural properties, potentially reducing efficacy and compromising safety by preventing target engagement. Stability testing for synthetic peptides is performed by following the International Council for Harmonisation (ICH) guidelines Q1A(R2) and Q5C. The current work endeavours to explore afamelanotide’s degradation pathways under various chemical and physical stress conditions: acidic, basic, neutral, and oxidative stress, UV light exposure, and increased temperature at 60⁰C. The study demonstrated that afamelanotide undergoes degradation under all applied stress conditions with the generation of fourteen different degradation products (DPs) which were separated by gradient reversed-phase HPLC on a Zorbax SB C18 column (300 Å, 4.6*150 mm, 3.5 µm) and the method was validated according to the ICH Q2(R1) guideline. To enable comprehensive characterization, the analysis was coupled with ultra-high-performance liquid chromatography-high resolution tandem mass spectrometry (UHPLC-HRMS/MS), where collision-induced dissociation yielded abundant and accurate fragmentation patterns, enabling the detailed structural elucidation of the products. While this work has identified several degradation pathways such as truncation, methylation, deacetylation, and oxidation, it also establishes complete stability profile of α-MSH analogue, thus offering key insights for the rational design of robust drug formulations.
{"title":"Investigation of the stability profile of therapeutic α-MSH analogue: Insights from liquid chromatography-high resolution mass spectrometry analysis of afamelanotide","authors":"Ashwini Chawathe , Nitish Sharma","doi":"10.1016/j.jpba.2026.117362","DOIUrl":"10.1016/j.jpba.2026.117362","url":null,"abstract":"<div><div>Afamelanotide, also known as melanotan-1, is a synthetic 13-amino acid peptidomimetic of α-melanocyte stimulating hormone (α-MSH), and is a critical peptide orphan drug used for the management of erythropoietic protoporphyria. It contains norleucine and <span>D</span>-phenylalanine at positions 4 and 7, in place of methionine and <span>L</span>-phenylalanine, respectively as found in endogenous peptide. Therapeutic peptide stability profiling is crucial in drug development because chemical and physical degradation during storage alters structural properties, potentially reducing efficacy and compromising safety by preventing target engagement. Stability testing for synthetic peptides is performed by following the International Council for Harmonisation (ICH) guidelines Q1A(R2) and Q5C. The current work endeavours to explore afamelanotide’s degradation pathways under various chemical and physical stress conditions: acidic, basic, neutral, and oxidative stress, UV light exposure, and increased temperature at 60⁰C. The study demonstrated that afamelanotide undergoes degradation under all applied stress conditions with the generation of fourteen different degradation products (DPs) which were separated by gradient reversed-phase HPLC on a Zorbax SB C18 column (300 Å, 4.6*150 mm, 3.5 µm) and the method was validated according to the ICH Q2(R1) guideline. To enable comprehensive characterization, the analysis was coupled with ultra-high-performance liquid chromatography-high resolution tandem mass spectrometry (UHPLC-HRMS/MS), where collision-induced dissociation yielded abundant and accurate fragmentation patterns, enabling the detailed structural elucidation of the products. While this work has identified several degradation pathways such as truncation, methylation, deacetylation, and oxidation, it also establishes complete stability profile of α-MSH analogue, thus offering key insights for the rational design of robust drug formulations.</div></div>","PeriodicalId":16685,"journal":{"name":"Journal of pharmaceutical and biomedical analysis","volume":"272 ","pages":"Article 117362"},"PeriodicalIF":3.1,"publicationDate":"2026-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145981052","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-14DOI: 10.1016/j.jpba.2026.117358
Fanjiao Zuo , Peng Zhao , Xueyu Liu, Huining Geng, Lu Chen, Jinyue Ma, Yameng Zhu, Zhenguo Lv, Ye Shang, Huizi Ouyang, Jun He
Euonymi herba (EH) was one of the traditional characteristic national medicines of Guangxi, which had various pharmacological activities such as hemostasis, anti-myocardial hypoxia, and anti-aging. This study established a reliable ultra-high performance liquid chromatography-quadrupole linear ion trap tandem mass spectrometry (UHPLC-QTRAP-MS/MS) method for the simultaneous quantification of multiple components in rat plasma following oral administration of EH extract. The method demonstrated satisfactory specificity, excellent linearity (r ≥ 0.9938), acceptable precision (RSD ≤ 10.34 %), accuracy (ranging from −9.73–9.00 %), recovery (between 65.95 % and 111.75 %), matrix effect (between 60.49 % and 116.11 %) and stability (RSD ≤ 8.36 %), with all key parameters meeting acceptance criteria for bioanalytical method validation. The pharmacokinetic study yielded the profiles and parameters for ten components, revealing dulcitol as the compound with the highest exposure and fastest absorption. This work provides critical data for elucidating the pharmacologically active constituents of EH.
{"title":"Determination of fifteen compounds in rat plasma by UHPLC-QTRAP-MS/MS for pharmacokinetic study after oral administration of Euonymi herba extract","authors":"Fanjiao Zuo , Peng Zhao , Xueyu Liu, Huining Geng, Lu Chen, Jinyue Ma, Yameng Zhu, Zhenguo Lv, Ye Shang, Huizi Ouyang, Jun He","doi":"10.1016/j.jpba.2026.117358","DOIUrl":"10.1016/j.jpba.2026.117358","url":null,"abstract":"<div><div><em>Euonymi herba</em> (EH) was one of the traditional characteristic national medicines of Guangxi, which had various pharmacological activities such as hemostasis, anti-myocardial hypoxia, and anti-aging. This study established a reliable ultra-high performance liquid chromatography-quadrupole linear ion trap tandem mass spectrometry (UHPLC-QTRAP-MS/MS) method for the simultaneous quantification of multiple components in rat plasma following oral administration of EH extract. The method demonstrated satisfactory specificity, excellent linearity (r ≥ 0.9938), acceptable precision (RSD ≤ 10.34 %), accuracy (ranging from −9.73–9.00 %), recovery (between 65.95 % and 111.75 %), matrix effect (between 60.49 % and 116.11 %) and stability (RSD ≤ 8.36 %), with all key parameters meeting acceptance criteria for bioanalytical method validation. The pharmacokinetic study yielded the profiles and parameters for ten components, revealing dulcitol as the compound with the highest exposure and fastest absorption. This work provides critical data for elucidating the pharmacologically active constituents of EH.</div></div>","PeriodicalId":16685,"journal":{"name":"Journal of pharmaceutical and biomedical analysis","volume":"272 ","pages":"Article 117358"},"PeriodicalIF":3.1,"publicationDate":"2026-01-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145980442","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-12DOI: 10.1016/j.jpba.2026.117354
Paulo Cezar de Moraes , Alessandra Koehler , Letícia Maria Eidt , Cristiane Almeida Soares Cattani , Valeriano Antonio Corbellini , Maria Lúcia Scroferneker
Leprosy is a chronic granulomatous, infectious and disabling disease, whose etiological agents are Mycobacterium leprae and M. lepromatosis. Leprosy reactions are the main causes of peripheral nerve damage and sequelae of the disease. There is no laboratory test that alone allows the identification of these episodes, causing delays in their diagnosis and treatment. The objective of this study was to propose a methodology based on Fourier transform infrared (FTIR) spectroscopy to detect leprosy reactions in the saliva of leprosy patients, supervised by the clinical diagnosis of these episodes. A total of 131 saliva samples were included and analyzed by attenuated total reflection (ATR)-FTIR; a supervised analysis with partial least squares discriminant analysis (PLS-DA), after orthogonal signal correction (OSC), was used to classify the samples into two groups: with and without leprosy reactions. The PLS-DA model with one latent variable and one OSC component showed 100 % sensitivity and specificity both in the calibration and prediction sets. Thus, all samples were correctly classified, allowing the diagnosis of leprosy reactions in saliva with high accuracy. Therefore, the FTIR-based chemometric model proved promising for the rapid and early identification of these episodes, contributing to clinical management of patients with leprosy.
{"title":"Identification of leprosy reactions using Fourier transform infrared (FTIR) spectroscopy supervised by clinical evaluation","authors":"Paulo Cezar de Moraes , Alessandra Koehler , Letícia Maria Eidt , Cristiane Almeida Soares Cattani , Valeriano Antonio Corbellini , Maria Lúcia Scroferneker","doi":"10.1016/j.jpba.2026.117354","DOIUrl":"10.1016/j.jpba.2026.117354","url":null,"abstract":"<div><div>Leprosy is a chronic granulomatous, infectious and disabling disease, whose etiological agents are <em>Mycobacterium leprae</em> and <em>M. lepromatosis</em>. Leprosy reactions are the main causes of peripheral nerve damage and sequelae of the disease. There is no laboratory test that alone allows the identification of these episodes, causing delays in their diagnosis and treatment. The objective of this study was to propose a methodology based on Fourier transform infrared (FTIR) spectroscopy to detect leprosy reactions in the saliva of leprosy patients, supervised by the clinical diagnosis of these episodes. A total of 131 saliva samples were included and analyzed by attenuated total reflection (ATR)-FTIR; a supervised analysis with partial least squares discriminant analysis (PLS-DA), after orthogonal signal correction (OSC), was used to classify the samples into two groups: with and without leprosy reactions. The PLS-DA model with one latent variable and one OSC component showed 100 % sensitivity and specificity both in the calibration and prediction sets. Thus, all samples were correctly classified, allowing the diagnosis of leprosy reactions in saliva with high accuracy. Therefore, the FTIR-based chemometric model proved promising for the rapid and early identification of these episodes, contributing to clinical management of patients with leprosy.</div></div>","PeriodicalId":16685,"journal":{"name":"Journal of pharmaceutical and biomedical analysis","volume":"272 ","pages":"Article 117354"},"PeriodicalIF":3.1,"publicationDate":"2026-01-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145981050","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-12DOI: 10.1016/j.jpba.2026.117353
Xiaoyan Zhang , Shuang Feng , Ziluo Zhang , Chuya Wang , Yongshan Ai , Yalin Xi , Lei Yin , Meiyun Shi
This study established a robust and selective ultra-high-performance liquid chromatography–tandem mass spectrometry (UHPLC-MS/MS) method to investigate the excretion behavior of polyethylene glycol 1000 (PEG1K) oligomers (N = 13–26) in rats. PEG is widely used in pharmaceutical applications, particularly in drug delivery systems, yet detailed excretion profiles of lower molecular weight PEGs remain insufficiently characterized. The developed method utilized ammonium adducts ([M+NH₄]⁺) as precursor ions in multiple reaction monitoring mode, enabling sensitive and high-throughput quantification of individual oligomers in biological matrices. Following intravenous administration in rats, excretion kinetics were monitored over 48 h. Cumulative recovery analysis revealed that renal excretion was the dominant elimination pathway, accounting for 47.30–68.52 % of the administered dose in urine, while fecal excretion represented only 0.66–3.38 %. These findings provide critical insights into the in vivo disposition of PEG1K, supporting its safety evaluation and rational application in drug formulation. The presented analytical platform offers a reliable tool for polymer pharmacokinetic studies.
{"title":"Unraveling excretion behavior of polyethylene glycol 1000 with 13–26 subunits in rats by UHPLC-MS/MS","authors":"Xiaoyan Zhang , Shuang Feng , Ziluo Zhang , Chuya Wang , Yongshan Ai , Yalin Xi , Lei Yin , Meiyun Shi","doi":"10.1016/j.jpba.2026.117353","DOIUrl":"10.1016/j.jpba.2026.117353","url":null,"abstract":"<div><div>This study established a robust and selective ultra-high-performance liquid chromatography–tandem mass spectrometry (UHPLC-MS/MS) method to investigate the excretion behavior of polyethylene glycol 1000 (PEG1K) oligomers (N = 13–26) in rats. PEG is widely used in pharmaceutical applications, particularly in drug delivery systems, yet detailed excretion profiles of lower molecular weight PEGs remain insufficiently characterized. The developed method utilized ammonium adducts ([M+NH₄]⁺) as precursor ions in multiple reaction monitoring mode, enabling sensitive and high-throughput quantification of individual oligomers in biological matrices. Following intravenous administration in rats, excretion kinetics were monitored over 48 h. Cumulative recovery analysis revealed that renal excretion was the dominant elimination pathway, accounting for 47.30–68.52 % of the administered dose in urine, while fecal excretion represented only 0.66–3.38 %. These findings provide critical insights into the in vivo disposition of PEG1K, supporting its safety evaluation and rational application in drug formulation. The presented analytical platform offers a reliable tool for polymer pharmacokinetic studies.</div></div>","PeriodicalId":16685,"journal":{"name":"Journal of pharmaceutical and biomedical analysis","volume":"272 ","pages":"Article 117353"},"PeriodicalIF":3.1,"publicationDate":"2026-01-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145980444","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Extracellular vesicles (EV) are lipid-based nanoparticles naturally released by cells, exhibiting considerable heterogeneity in size, surface charge, and biomolecular composition. Recently, increasing attention has been directed toward the characterization of distinct EV-subpopulations, particularly based on unique surface antigen expression profiles. Therefore, a method for analyzing EV-subpopulations using versatile equipment would be highly valuable. In this study, we developed a labeling method for analyzing specific populations in small EVs (sEVs) distinguished by their levels phosphatidylserine (PS) exposure. For visualization, sEVs were labeled with two fusion proteins (enhanced green fluorescent protein [EGFP] linked to lactadherin [LA] and mCherry-Vn96) comprising a PS-binding protein or sEV-tropic peptide (Vn96) combined with fluorescent proteins. Using ultracentrifugation, bulk sEVs were collected, and a fraction of PS(−) sEVs (PS(+) sEV-depleted fraction) were isolated by depleting PS(+) sEVs from bulk sEVs. In bulk sEVs, the colocalization of EGFP-LA and mCherry-Vn96-derived signals was detected. In contrast, the PS(+) sEV-depleted fraction exhibited reduced EGFP-LA fluorescence signal, with only mCherry-Vn96 fluorescence remaining detectable. In conclusion, our labeling technique facilitates the identification and analysis of sEV-subpopulations using fluorescence microscopy in small sample volumes. This platform can also be adapted for broader applications by incorporating additional protein markers.
{"title":"Development of a simple labeling method using fluorescent protein fusion proteins targeting the membrane lipids of small extracellular vesicles","authors":"Yuki Kobayashi, Yuki Takahashi, Hiroto Otera, Yuriko Higuchi, Yoshinobu Takakura","doi":"10.1016/j.jpba.2026.117356","DOIUrl":"10.1016/j.jpba.2026.117356","url":null,"abstract":"<div><div>Extracellular vesicles (EV) are lipid-based nanoparticles naturally released by cells, exhibiting considerable heterogeneity in size, surface charge, and biomolecular composition. Recently, increasing attention has been directed toward the characterization of distinct EV-subpopulations, particularly based on unique surface antigen expression profiles. Therefore, a method for analyzing EV-subpopulations using versatile equipment would be highly valuable. In this study, we developed a labeling method for analyzing specific populations in small EVs (sEVs) distinguished by their levels phosphatidylserine (PS) exposure. For visualization, sEVs were labeled with two fusion proteins (enhanced green fluorescent protein [EGFP] linked to lactadherin [LA] and mCherry-Vn96) comprising a PS-binding protein or sEV-tropic peptide (Vn96) combined with fluorescent proteins. Using ultracentrifugation, bulk sEVs were collected, and a fraction of PS<sup>(−)</sup> sEVs (PS<sup>(+)</sup> sEV-depleted fraction) were isolated by depleting PS<sup>(+)</sup> sEVs from bulk sEVs. In bulk sEVs, the colocalization of EGFP-LA and mCherry-Vn96-derived signals was detected. In contrast, the PS<sup>(+)</sup> sEV-depleted fraction exhibited reduced EGFP-LA fluorescence signal, with only mCherry-Vn96 fluorescence remaining detectable. In conclusion, our labeling technique facilitates the identification and analysis of sEV-subpopulations using fluorescence microscopy in small sample volumes. This platform can also be adapted for broader applications by incorporating additional protein markers.</div></div>","PeriodicalId":16685,"journal":{"name":"Journal of pharmaceutical and biomedical analysis","volume":"272 ","pages":"Article 117356"},"PeriodicalIF":3.1,"publicationDate":"2026-01-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145981047","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}