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Prevalence, isolation and identification of histamine forming bacteria in selected stages of supply chain of Yellowfin tuna export industry in Sri Lanka 斯里兰卡黄鳍金枪鱼出口行业供应链选定阶段组胺形成细菌的流行、分离和鉴定
IF 0.5 4区 综合性期刊 Q3 Multidisciplinary Pub Date : 2023-06-30 DOI: 10.4038/jnsfsr.v51i2.10819
P. Ginigaddarage, G. J. Ganegama Arachchi, K. Ariyawansa, C. Nanayakkara
This study aimed to identify histamine-forming bacteria (HFB) and the sources of introduction of such bacteria to recommend control measures to mitigate histamine formation in yellowfin tuna (YFT). Field samples were collected from multi-day boats that landed at Dikkowita, Negombo, Trincomalee and Dondra fishery harbours. Ice from the fish holds (n=63) and chill transport vehicles (n=63), and swabs from the fish holds (n=63), the boat decks (n=63) and the skin of YFT (n=63) were collected. Fish loin samples (n=15), ice samples (n=36) and swabs from the skin of YFT (n=18), floor (n=18) and chill transport vehicles (n=18) were collected from fish processing plants. Presumptive HFB isolated from Nivens medium and Violet Red Bile Glucose (VRBG) agar were screened for histamine forming ability in Tripticase soy broth (TSB) supplemented with 1.0% L-histidine. HFB isolates were characterized by sequencing approximately 1400 bp of the 16S rDNA. Seven isolates that produced histamine in the range of 3000–4000 ppm in TSB isolated from ice samples, and a swab sample collected from the boat deck, were confirmed as Klebsiella aerogens (n=6) and Morganella morganii (n=1) respectively. Hafnia alvei (n=1), Serratia sp. (n=2), Citrobacter freundii (n=1), Rahnella sp. (n=1) and Aeromonas salmonicida (n=8) were also among the isolated histamine forming bacteria. Pseudomonas sp. (n=24) and Shewanella baltica (n=7), which are known as spoilage bacteria were also isolated and showed weak histamine formation. Hence, it is evident that histamineforming bacteria could be introduced into the fish from ice and contacting surfaces. This necessitates the practice of rigorous cleaning procedures and adaptation of proper postharvest handling procedures to minimize contamination of the fish.
本研究旨在确定组胺形成细菌(HFB)及其引入来源,以建议控制措施,减轻黄鳍金枪鱼(YFT)中组胺的形成。从Dikkowita、Negombo、Trincomalee和Dondra渔港登陆的多日船上采集了现场样本。收集来自鱼舱(n=63)和冷藏运输车(n=63。从鱼类加工厂采集鱼腰样本(n=15)、冰样本(n=36)和YFT(n=18)、地板(n=18。从Nivens培养基和紫红色胆汁葡萄糖(VRBG)琼脂中分离的假定HFB在添加1.0%L-组氨酸的Tripticase大豆肉汤(TSB)中筛选组胺形成能力。通过对大约1400bp的16S rDNA进行测序来表征HFB分离株。从冰样本中分离出的TSB中产生3000–4000 ppm组胺的7个分离株和从甲板上采集的一个拭子样本分别被确认为产气克雷伯菌(n=6)和摩根氏菌(n=1)。Hafnia alwei(n=1)、Serratia sp.(n=2)、Citrobacter freundii(n=1。假单胞菌(Pseudomonas sp.,n=24)和巴氏谢瓦内拉(Shewanella baltica,n=7)也被分离出来,它们被称为腐败细菌,并显示出弱组胺形成。因此,很明显,形成组胺的细菌可以从冰和接触表面引入鱼类。这就需要严格的清洁程序和适当的采后处理程序,以最大限度地减少对鱼类的污染。
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引用次数: 0
Natural α-glucosidase inhibitors from selected medicinal plants in Malaysia 天然α-葡萄糖苷酶抑制剂从马来西亚选定的药用植物
IF 0.5 4区 综合性期刊 Q3 Multidisciplinary Pub Date : 2023-06-30 DOI: 10.4038/jnsfsr.v51i2.11177
S. Y. Liew, Y. Sivasothy, N. N. Shaikh, K. Javaid, DM Isa, V. Lee, M. Choudhary, K. Awang
The most prevalent subtype of diabetes is Type 2 Diabetes Mellitus which results from an abnormal postprandial increase in blood glucose. Inhibition of the carbohydrate-hydrolysing enzymes (alpha-glucosidase and alpha-amylase) in the human digestive organs can control blood glucose levels, making it an important strategy in the management of Type 2 Diabetes Mellitus. A majority of the oral synthetic drugs which have been developed to treat Type 2 Diabetes Mellitus are expensive and have undesirable side effects. As a result, plant-derived remedies have become preferred alternatives as they are easily available, affordable and less harmful. Angustine (1) the major constituent in Nauclea subdita (Korth.) Steud., and (E)-labda-8(17),12-dien-15,16-dial (2) and zerumin A (3) of Alpinia pahangensis Ridley were evaluated for their α-glucosidase inhibitory activity. (E)-Labda-8(17),12-dien-15,16-dial (2) (IC50 = 39.7 μM) was identified as the most potent inhibitor among all three, followed by angustine (1) (IC50 = 48.1 μM) and zerumin A (3) (IC50 = 53.3 μM). Enzyme kinetic studies indicated that angustine (1) was a mixed-type inhibitor, while (E)-labda-8(17),12-dien-15,16-dial (2), and zerumin A (3) were non-competitive inhibitors. Molecular docking and molecular dynamics (MD) simulation studies were performed to predict the key interactions between the ligands and the target protein, 1AGM (complex of acarbose with glucoamylase from Aspergillus awamori). The results of the study of binding interaction energy suggested that angustine (1) has the potential to be used as a natural drug lead in the treatment of type 2 diabetes mellitus.
最常见的糖尿病亚型是2型糖尿病,它是由餐后血糖异常升高引起的。抑制人体消化器官中的碳水化合物水解酶(α-葡萄糖苷酶和α-淀粉酶)可以控制血糖水平,使其成为治疗2型糖尿病的重要策略。大多数已开发用于治疗2型糖尿病的口服合成药物价格昂贵且具有不良副作用。因此,植物来源的补救措施已成为首选替代品,因为它们易于获得、负担得起且危害较小。Angustine(1)Nauclea subdata(Korth.)Steud的主要成分。,和(E)-labda-8(17)、12-二烯-15,16-二醛(2)和巴汉葛山豆的泽鲁明A(3)对α-葡萄糖苷酶的抑制活性进行了评价。(E) -Labda-8(17),12-dien-15,16-dial(2)(IC50=39.7μM)被确定为三者中最有效的抑制剂,其次是angustine(1)(IC50=48.1μM)和zerumin A(3)(IC50:53.3μM)。酶动力学研究表明,angustine(1)是一种混合型抑制剂,而(E)-labda-8(17)、12-dien-15,16-dial(2)和zerumin a(3)是非竞争性抑制剂。进行了分子对接和分子动力学(MD)模拟研究,以预测配体与靶蛋白1AGM(来自泡盛曲霉的阿卡波糖与葡糖淀粉酶的复合物)之间的关键相互作用。结合相互作用能的研究结果表明,angustine(1)具有作为天然药物先导治疗2型糖尿病的潜力。
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引用次数: 0
Effect of Degree of Saturation on soil-nail Pullout Resistance 饱和度对土钉拔出阻力的影响
IF 0.5 4区 综合性期刊 Q3 Multidisciplinary Pub Date : 2023-06-30 DOI: 10.4038/jnsfsr.v51i2.11185
K. Fernando, N. Priyankara
Soil nailing is a technique which is used to reinforce and strengthen the existing ground conditions. This is done by installing closely spaced, passive, structural inclusions known as nail into the soil and these nails helps to improve the overall shear strength of soil. The nail pullout resistance is the shear stress at the grout-soil interface. The soil-nail pullout resistance depends on many parameters. Among the factors influencing the soil-nail pullout resistance, degree of saturation of the soil is an important factor. As degree of saturation of soil mass change with the moisture content of the soil, the pullout resistance may decrease during the intense rainfall. However, verification of pullout tests on soil-nail are not conducted under the worst condition. Hence, measured pullout resistance may not be a safe parameter for design. As such, in this research study, the effect of degree of saturation on pullout resistance was studied by conducting a series of laboratory tests using a laboratory pullout box. Especially designed waterproof cap was used to apply back pressure to saturate the soil within the pullout box. Variation of earth pressures close to the grouted nail were observed during the tests. It was evident from the results that higher the degree of saturation, lower the pullout resistance. Maximum pullout resistance was observed when the degree of saturation is near the optimum moisture of the soil. When the soil is sufficiently dry, lower pullout resistance was observed due to low bond strength between grout surface and surrounding dry soil.
土钉支护是一种用于加固现有地基条件的技术。这是通过在土壤中安装被称为钉子的紧密间隔的被动结构夹杂物来实现的,这些钉子有助于提高土壤的整体抗剪强度。钉子的抗拔力是灌浆-土壤界面处的剪切应力。土钉的抗拔性取决于许多参数。在影响土钉抗拔力的因素中,土体的饱和度是一个重要因素。由于土体的饱和度随土壤含水量的变化而变化,在强降雨期间,抗拔性可能会降低。然而,在最坏的情况下,并没有对土钉的拉拔试验进行验证。因此,测量的抗拔性可能不是设计的安全参数。因此,在本研究中,通过使用实验室拉拔箱进行一系列实验室试验,研究了饱和度对拉拔阻力的影响。特别设计的防水帽用于施加背压,使拔出箱内的土壤饱和。试验期间,观察到灌浆钉附近的土压力变化。结果表明,饱和程度越高,抗拔性越低。当饱和程度接近土壤的最佳湿度时,观察到最大抗拔性。当土壤充分干燥时,由于灌浆表面和周围干燥土壤之间的粘结强度较低,因此观察到较低的抗拔性。
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引用次数: 0
Efficiency boost of inverted polymer solar cells using electrodeposited n-type Cu2O electrons selective transport layers (ESTLs) 使用电沉积n型Cu2O电子选择性传输层(ESTL)的倒置聚合物太阳能电池的效率提高
IF 0.5 4区 综合性期刊 Q3 Multidisciplinary Pub Date : 2023-06-30 DOI: 10.4038/jnsfsr.v51i2.11230
W. Wanninayake, D. Namawardana, R. Wanigasekara, K. Jayathilaka, R. P. Wijesundera, W. Siripala, M. I. Malik
Polymer solar cells (PSCs) have attracted tremendous interest as suitable candidates for harnessing solar energy in the recent years. The inherent optoelectronic properties of the inorganic transition metal oxide, negative type cuprous oxide (n-Cu2O), makes it an attractive candidate to improve the performance of PSCs when incorporated as the electron selective transport layers (ESTLs) in the device. In this study, inverted PSCs were fabricated on stainless steel (SS) substrates with n-Cu2O as the ESTL. The n-Cu2O films were prepared by electrodeposition method, followed by annealing under ambient conditions. The active layer material was prepared as bulk heterojunction blend using regioregular poly(3-hexylthiophene) (P3HT) and phenyl-C61-butyric acid methyl ester (PCBM). Poly-(4,3-ethylene dioxythiophene):poly(styrenesulphonate) (PEDOT:PSS) was used as the hole transport layer (HTL) and the final device structure was SS/n-Cu2O/P3HT:PCBM/PEDOT:PSS/Au. Annealing of the n-Cu2O ESTL in air was optimized observing the photoactive performance of the device. Optoelectronic performance of the devices was characterized using spectral response and dark and light current-voltage (I-V) measurements. n-Cu2O ESTL- incorporated devices have absorbed more photons in the short wavelength region of 450‒600 nm with the annealing of n-Cu2O ESTL due to the reduction of electron-hole recombination. The performance of the devices was significantly increased after incorporating pre-annealed n-Cu2O ESTL at 175 °C for 30 min in air. The maximum power conversion efficiency (PCE) was 0.35%.
近年来,聚合物太阳能电池作为利用太阳能的合适候选者引起了人们的极大兴趣。无机过渡金属氧化物,负型氧化亚铜(n-Cu2O)的固有光电性质,使其成为在器件中作为电子选择性传输层(ESTL)引入时提高PSC性能的有吸引力的候选者。在本研究中,以n-Cu2O为ESTL,在不锈钢(SS)基底上制备了倒置PSCs。采用电沉积方法制备了n-Cu2O薄膜,然后在环境条件下退火。使用区域规则聚(3-己基噻吩)(P3HT)和苯基-C61-丁酸甲酯(PCBM)以本体异质结共混物的形式制备活性层材料。采用聚(4,3-乙烯二氧噻吩):聚(苯乙烯磺酸盐)(PEDOT:PSS)作为空穴传输层(HTL),最终器件结构为SS/n-Cu2O/P3HT:PCBM/PEDOT:PSS/Au。对n-Cu2O ESTL在空气中的退火进行了优化,观察了器件的光活性。使用光谱响应和明暗电流电压(I-V)测量来表征器件的光电性能。随着n-Cu2O ESTL的退火,由于电子-空穴复合的减少,掺入n-Cu2O-ESTL的器件在450-600nm的短波长区域吸收了更多的光子。在175°C的空气中加入预退火的n-Cu2O ESTL 30分钟后,器件的性能显著提高。最大功率转换效率(PCE)为0.35%。
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引用次数: 0
Preliminary study on surface phytoplankton assemblages and physicochemical parameters, off the west and south-west coasts of Sri Lanka 斯里兰卡西部和西南海岸海面浮游植物组合和物理化学参数的初步研究
IF 0.5 4区 综合性期刊 Q3 Multidisciplinary Pub Date : 2023-06-30 DOI: 10.4038/jnsfsr.v51i2.10780
H. Jayasiri
This study evaluates the phytoplankton community structure in relation to physicochemical properties in the western and southwestern coastal waters of Sri Lanka. Phytoplankton and water samples were collected from March to April, 2017 at three transect lines towards offshore in Colombo, Beruwala, and Mirissa, each containing 10 sampling sites. The distance between sampling stations on each transect line was approximately       2 km.  Phytoplankton samples were collected towing a net (10 µm mesh) by vertical hauls from known depth     (2.5 m) and preserved in Lugol’s solution. The phytoplankton were identified to the lowest possible taxonomic level and counted under the Sedgwick rafter cell using a light microscope. Water samples were collected at 0.5 m depth using the Ruttner Sampler and analysed for chlorophyll-a, nutrients, and total suspended solids (TSS). This study identified 57 phytoplankton species comprised of diatoms (33 species), dinoflagellates (23 species), and cyanobacteria (1 species). In general, phytoplankton abundance and species diversity decreased towards offshore in the three transects. Total phytoplankton and diatom abundances varied significantly among the three transect lines, and significantly higher abundance was reported at Mirissa and Colombo than at Beruwala (One-way ANOVA; p < 0.05). Total phytoplankton abundance significantly correlated with dinoflagellates, toxic species of dinoflagellates, chlorophyll-a, and nitrate-N (p < 0.01). Ten toxic species of dinoflagellates were reported in the study. Diatoms dominated (60%) in the study area, followed by cyanobacteria (31%) and dinoflagellates (9%). Diatoms of Cerataulina sp. (31%) and Navicula sp. (50%) were dominant in Colombo and Mirissa respectively, while cyanobacteria of Trichodesmium sp. (85%) dominated in Beruwala, indicating the possibility of blooms of this species at study sites when environmental conditions are favourable.
本研究评估了斯里兰卡西部和西南部沿海水域浮游植物群落结构与理化性质的关系。2017年3月至4月,在科伦坡、贝鲁瓦拉和米里萨的三条近海样线采集浮游植物和水样,每条样线包含10个采样点。每个样线上采样站之间的距离约为2公里。浮游植物样本是通过垂直拖拽从已知深度(2.5米)用网(10µm网眼)收集的,并保存在Lugol的溶液中。浮游植物被鉴定到尽可能低的分类水平,并使用光学显微镜在Sedgwick rafter细胞下计数。使用Ruttner采样器在0.5m深度采集水样,并分析叶绿素a、营养物质和总悬浮固体(TSS)。这项研究确定了57种浮游植物,包括硅藻(33种)、甲藻(23种)和蓝藻(1种)。总体而言,在三个样带中,浮游植物丰度和物种多样性向近海方向下降。浮游植物和硅藻的总丰度在三个样线之间差异显著,据报道,Mirissa和Colombo的丰度明显高于Beruwala(单向方差分析;p<0.05)。浮游植物总丰度与甲藻、甲藻有毒物种、叶绿素a,本研究报道了10种甲藻毒素。硅藻在研究区域占主导地位(60%),其次是蓝藻(31%)和甲藻(9%)。Cerataulina sp.(31%)和Navicula sp.(50%)的硅藻分别在Colombo和Mirissa占优势,而Trichodesmium sp.(85%)的蓝藻在Beruwala占主导地位,这表明当环境条件有利时,该物种可能在研究地点开花。
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引用次数: 0
In-vitro wound healing potential of Ziziphus oenoplia (L.) Miller 紫竹体外创面愈合潜力的研究米勒
IF 0.5 4区 综合性期刊 Q3 Multidisciplinary Pub Date : 2023-06-30 DOI: 10.4038/jnsfsr.v51i2.11232
W. Samarasinghe, K. H. Jayawardena, C. Ranasinghe, S. Somaratne, G. Gunaherath
Non-healing wounds are a global health problem. Substances that enhance cell proliferation, angiogenesis, and prevention of bacterial infections accelerate the wound healing process. In this study, the wound healing potential of Ziziphus oenoplia, is investigated for its ability in cell proliferation, angiogenesis, and antibacterial potential. The potential of cell proliferation enhancement (mean percent wound closure) and angiogenic response (mean vascular index) of hexanes, dichloromethane, ethyl acetate, and methanol extracts of leaf and bark of Z. oenoplia were evaluated by scratch wound assay (SWA) using Madin-Darby Canine Kidney (MDCK) cells and chick chorioallantoic membrane (CAM) assay, respectively. The antibacterial activity of these extracts was evaluated against Bacillus subtilis, Staphylococcus aureus, Escherichia coli, and Pseudomonas aeruginosa by disc diffusion method. Enhanced cell proliferation was shown by the hexanes, dichloromethane, and ethyl acetate extracts of leaf and the hexanes extract of bark. An enhanced angiogenic response was shown by the methanol and ethyl acetate extracts of leaves and the methanol and hexanes extracts of bark. Dichloromethane extract of both leaf and bark showed considerable antibacterial activity against P. aeruginosa which is less susceptible to common antibiotics. SWA-directed fractionation of the hexanes extract of the leaf has resulted in the isolation and identification of an active fraction showing mean percent wound closure of 86.4% (positive control 90.2%) and mean vascular index of 34.5 (positive control 48.6). This fraction contained lupeol, α-amyrin, β-amyrin, hexacosanol, and octacosanol. The present study provides supportive evidence for the potential of wound healing enhancement of leaf and bark extracts of Z. oenoplia.
无法愈合的伤口是一个全球性的健康问题。增强细胞增殖、血管生成和预防细菌感染的物质可以加速伤口愈合过程。在本研究中,研究了泽泻的伤口愈合潜力,包括其细胞增殖、血管生成和抗菌潜力。分别使用Madin-Darby Canine Kidney(MDCK)细胞和鸡绒毛尿囊膜(CAM)测定法,通过划痕试验(SWA)评估了酿酒酵母叶片和树皮的己烷、二氯甲烷、乙酸乙酯和甲醇提取物的细胞增殖增强潜力(平均伤口闭合百分比)和血管生成反应(平均血管指数)。采用纸片扩散法评价了这些提取物对枯草芽孢杆菌、金黄色葡萄球菌、大肠杆菌和铜绿假单胞菌的抗菌活性。叶片的己烷、二氯甲烷和乙酸乙酯提取物以及树皮的己烷提取物显示细胞增殖增强。叶片的甲醇和乙酸乙酯提取物以及树皮的甲醇和己烷提取物显示出增强的血管生成反应。叶和树皮的二氯甲烷提取物对铜绿假单胞菌都表现出相当大的抗菌活性,而铜绿假单胞杆菌对常见抗生素不太敏感。SWA直接分离叶片的己烷提取物,分离和鉴定出一种活性组分,其平均伤口闭合率为86.4%(阳性对照90.2%),平均血管指数为34.5(阳性对照48.6)。该组分含有羽扇豆醇、α-淀粉、β-淀粉、二十六烷醇和二十八烷醇。本研究为啤酒花叶和树皮提取物增强伤口愈合的潜力提供了支持性证据。
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引用次数: 0
Assessment of submergence stress responses and mining allelic variations of submergence tolerance gene Sub1A in Sri Lankan rice germplasm 斯里兰卡水稻种质耐淹水基因Sub1A的淹水胁迫反应评估及等位基因变异挖掘
IF 0.5 4区 综合性期刊 Q3 Multidisciplinary Pub Date : 2023-04-11 DOI: 10.4038/jnsfsr.v51i1.11121
T. Kariyawasam, D. Nanayakkara, A. Sumanarathna, D. Weerasinghe, L. Suriyagoda, D. Jayatilake
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引用次数: 0
Assessment of transverse thermal conductivity of coir fibre using experimental, analytical, and numerical methods 用实验、分析和数值方法评估椰子纤维的横向热导率
IF 0.5 4区 综合性期刊 Q3 Multidisciplinary Pub Date : 2023-04-10 DOI: 10.4038/jnsfsr.v51i1.10870
L. Chamath, L. Srimal, G. Sewvandi
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引用次数: 1
Temperature control in an exothermic continuous stirred tank reactor 放热连续搅拌釜反应器的温度控制
IF 0.5 4区 综合性期刊 Q3 Multidisciplinary Pub Date : 2023-04-10 DOI: 10.4038/jnsfsr.v51i1.10844
V. A. Rani, G. Guna, D. Prabhakaran, M. Thirumarimurugan
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引用次数: 0
On recurrence relations for moments of dual generalized order statistics for a general transmuted power function distributions with characterizations 具有表征的一般变换幂函数分布对偶广义阶统计量矩的递推关系
IF 0.5 4区 综合性期刊 Q3 Multidisciplinary Pub Date : 2023-04-10 DOI: 10.4038/jnsfsr.v51i1.10469
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引用次数: 0
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Journal of the National Science Foundation of Sri Lanka
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