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Identification of organic compounds using artificial neural networks and refractive index 利用人工神经网络和折射率识别有机化合物
IF 1 4区 化学 Q4 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-01-01 DOI: 10.2298/jsc230201049k
Innocent Kirigiti, N. Aminah, Samson Thomas
Identification of chemical compounds has many applications in science and technology. However, this process still relies heavily on the knowledge and experience of chemists. Thus, the development of techniques for faster and more accurate chemical compound identification is essential. In this work, we demonstrate the feasibility of using artificial neural networks to accurately identify organic compounds through the measurement of refractive index. The models were developed based on refractive index measurements in different wavelengths of light, from UV to the far-infrared region. The models were trained with about 250,000 records of experimental optical constants for 60 organic compounds and polymers from published literature. The models performed with accuracies of up to 98%, with better performance observed for refractive index measurements across the visible and IR regions. The proposed models could be coupled with other devices for autonomous identification of chemical compounds using a single-wavelength dispersive measurement
化合物的鉴定在科学和技术上有许多应用。然而,这一过程仍然严重依赖于化学家的知识和经验。因此,开发更快、更准确的化合物鉴定技术至关重要。在这项工作中,我们证明了利用人工神经网络通过测量折射率来准确识别有机化合物的可行性。这些模型是基于从紫外光到远红外波段不同波长光的折射率测量而建立的。这些模型接受了来自已发表文献中60种有机化合物和聚合物的约25万份实验光学常数记录的训练。该模型的精度高达98%,在可见光和红外区域的折射率测量中观察到更好的性能。所提出的模型可以与使用单波长色散测量的化合物自主识别的其他设备耦合
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引用次数: 0
Chemical characterization and antimicrobial activity of Juglans nigra L. nut and green husk 核桃果仁和青皮的化学性质及抑菌活性研究
IF 1 4区 化学 Q4 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-01-01 DOI: 10.2298/jsc230210024r
K. Rajkovic, M. Drobac, P. Milić, V. Vučić, A. Arsic, Mirijana Peric, M. Radunović, Sanja Jeremić, J. Arsenijević
Juglans nigra (Black walnut) is a source of health-promoting biologically active compounds used in traditional medicine. The investigation of bioactive compounds in black walnut could lead to its broader application, as well as application of its by-products. Therefore, this study aimed to characterize J. nigra nut and green husk based on chemical analysis of their petroleum ether and ethanol extracts obtained by ultrasonic and reflux extraction methods, respectively. Different extract fractions were tested for their antimicrobial activities using Gram-negative bacteria (Escherichia coli, Pseudomonas aeruginosa), Gram-positive bacteria (Enterococcus faecalis Staphylococcus aureus) and yeast (reference strain and clinical isolates of Candida albicans). Ethanol extracts analysis, performed by High Performance Liquid Chromatography (HPLC), singled out the ellagic acid as the most dominant compound in nut (55.0 ? 1.3 ? 10-3 kg m-3) and green husk (114.1 ? 0.5? 10-3 kg m-3) extracts. Non-polar compounds were evaluated using Gas Chromatography (GC) analysis of petroleum ether extracts. Juglans nigra nut and green husk contained two saturated fatty acids, palmitic acid (C16:0) and stearic acid (C18:0), then, monounsaturated fatty acids, palmitoleic (C16:1n-7), oleic (C18:1n-9), and vaccenic acid (C18:1n-7), as well as polyunsaturated fatty acids, linoleic (C18:2n-6), ?-linolenic (C18:3n-6), and ?-linolenic (C18:3n-3) acids. Ethanol extracts of both J. nigra nut and green husk showed antimicrobial activity against C. albicans which is the most common cause of yeast infections.
黑胡桃(黑胡桃)是传统医学中使用的促进健康的生物活性化合物的来源。通过对黑核桃中生物活性物质的研究,为黑核桃及其副产品的开发利用提供了广阔的前景。因此,本研究旨在通过超声波提取的石油醚提取物和回流提取的乙醇提取物进行化学分析,对黑荆果和青皮进行表征。采用革兰氏阴性菌(大肠杆菌、铜绿假单胞菌)、革兰氏阳性菌(粪肠球菌、金黄色葡萄球菌)和酵母菌(白色念珠菌参考菌株和临床分离株)对不同提取物组分进行抑菌活性测试。乙醇提取物的高效液相色谱分析表明,鞣花酸是坚果中最主要的化合物(55.0 ?1.3 ?10-3 kg m-3)和绿皮(114.1 ?0.5 ?10-3 kg m-3)提取物。采用气相色谱法对石油醚提取物中的非极性化合物进行了分析。黑胡桃果和青皮含有棕榈酸(C16:0)和硬脂酸(C18:0)两种饱和脂肪酸,其次是单不饱和脂肪酸棕榈油酸(C16:1n-7)、油酸(C18:1n-9)和异丙酸(C18:1n-7),以及多不饱和脂肪酸亚油酸(C18:2n-6)、-亚麻酸(C18:3n-6)和-亚麻酸(C18:3n-3)。黑胡桃和绿皮的乙醇提取物对白色念珠菌都有抗菌活性,白色念珠菌是酵母菌感染最常见的原因。
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引用次数: 0
Kinetic investigation of reactions of a 3-arylidene-2-thiohydantoin derivative with palladium (II) salts 3-芳基醚-2-硫代氢酰英衍生物与钯盐反应动力学研究
IF 1 4区 化学 Q4 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-01-01 DOI: 10.2298/jsc230626052s
P. Stanić, Darko P Ašanin, T. Soldatović, Marija D. Živković
1H NMR spectroscopy was used to monitor the reactions of an arylidene 2-thiohydantoin derivative, 3-((phenylmethylene)amino)-2-thioxo-4- imidazolidinone (3), with PdCl2, cis-[PdCl2(dmso-S)2] and K2[PdCl4] in DMSO-d6 in order to elucidate the reaction kinetics and mechanism. The 2-thiohydantoin derivative 3 formed cis-[Pd(3-N,S)(dmso-S)2]+ complex (5) in reactions with PdCl2 and cis-[PdCl2(dmso-S)2], while no reaction with K2[PdCl4] was observed. A two-step mechanism for the reactions of 3 with PdCl2 and cis-[PdCl2(dmso- S)2] is proposed, in which fast coordination to the side chain nitrogen occurs in the first step, while chelation and coordination to the sulfur atom in the 2- thiohydantoin ring is the second, slower, rate-determining step. The reaction rate constants were calculated and reactivities of the 2-thiohydantoin derivative 3 towards the palladium(II) salts were compared and discussed. Reaction of 3 with cis-[PdCl2(dmso-S)2] was faster than with PdCl2. The investigated palladium(II) salts also react with the solvent, DMSO-d6, and the influence of these side reactions on the outcome and kinetics of the 2-thiohydantoin derivative complexation reaction is discussed in detail. The obtained results of this study can have an impact in explanation of the coordination behavior of antitumor active palladium(II) and platinum(II) complexes
利用核磁共振氢谱(1H NMR)对芳基2-硫代海因衍生物3-((苯基亚甲基)氨基)-2-硫代-4-咪唑烷酮(3)在DMSO-d6中与PdCl2、顺式-[PdCl2(dmso-S)2]和K2[PdCl4]的反应进行了监测,以阐明反应动力学和机理。2-硫代海因衍生物3与PdCl2和顺式-[PdCl2(dmso-S)2]反应形成顺式-[Pd(3- n,S)(dmso-S)2]+络合物(5),未与K2[PdCl4]反应。提出了3与PdCl2和顺式-[PdCl2(dmso- S)2]反应的两步机制,其中与侧链氮的快速配位发生在第一步,而与2-硫代氢醛酸环中的硫原子的螯合和配位是第二步,较慢,决定速率的步骤。计算了反应速率常数,并比较讨论了2-硫代海因衍生物3对钯(II)盐的反应活性。3与顺式-[PdCl2(dmso-S)2]的反应比与PdCl2的反应快。所研究的钯(II)盐还与溶剂DMSO-d6发生反应,并详细讨论了这些副反应对2-硫代海因衍生物络合反应的结果和动力学的影响。本研究获得的结果可以对解释抗肿瘤活性钯(II)和铂(II)配合物的配位行为产生影响
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引用次数: 0
DBUH+I3 complex an efficient catalyst for the synthesis of 2-phenyl benzimidazole and benzothiazole derivatives DBUH+I3配合物是合成2-苯基苯并咪唑和苯并噻唑衍生物的有效催化剂
IF 1 4区 化学 Q4 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-01-01 DOI: 10.2298/jsc220526007g
R. Gawade, P. Kulkarni
Herein, we have reported the facile synthesis of various benzimidazole / benzothiazole by using DBU-Iodine-Iodide as a green and simple catalyst. The R2NH+I3 complexes have been formed by reacting an aqueous mixture of ammonium iodide and molecular iodine with the aqueous solution of amine. The structure of R2NH+I3 complexes has confirmed by spectroscopic techniques. The prepared amine-iodine complexes have screened as a catalyst in the synthesis of benzimidazole / benzothiazoles. Among the screened catalyst DBUH+I3complex has been found as an efficient catalyst. The synthesis of benzimidazoles and benzothiazoles has been achieved with the reaction of o-phenylene diamine /o- amino thiophenol and various substituted aryl aldehyde using DBUH+I3 as a catalyst. The present protocol has offered some advantages over other reported protocols such as the mild reaction condition, commercially available precursors, inexpensive catalyst, short reaction time, the broad scope of the substrate, high yield, simple isolation of the product, and environmentally benign method.
本文报道了以dbu -碘-碘化物为绿色催化剂,简便地合成了多种苯并咪唑/苯并噻唑。R2NH+I3配合物是由碘化铵和分子碘的水溶液与胺水溶液反应而成的。R2NH+I3配合物的结构已被光谱技术证实。所制备的胺碘配合物在苯并咪唑/苯并噻唑的合成中作为催化剂进行了筛选。在筛选的催化剂中,发现DBUH+ i3配合物是一种高效的催化剂。以DBUH+I3为催化剂,邻苯二胺/邻氨基噻吩与各种取代芳醛反应合成了苯并咪唑和苯并噻唑。本方法具有反应条件温和、前体商品化、催化剂价格低廉、反应时间短、底物范围广、产率高、产物分离简单、方法环保等优点。
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引用次数: 0
Waste hemp and flax fibers and cotton and cotton/polyester yarns for removal of methylene blue from wastewater: Comparative study of adsorption properties 废麻、废亚麻纤维与棉、棉/涤纱对废水中亚甲基蓝的吸附性能比较研究
IF 1 4区 化学 Q4 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-01-01 DOI: 10.2298/jsc221213015v
M. Vukčević, Marina Maletic, Biljana Pejić, N. Karic, K. Trivunac, A. Perić-Grujić
Waste hemp and flax fibers, and cotton and cotton/polyester yarns, available in large quantities from the textile industry, were used as cheap and effective sorbents for the removal of methylene blue from wastewater. Waste fibers and yarns were characterized by scanning electron microscopy, Fourier transform infrared spectroscopy, iodine sorption, water retention, and point of zero charge, as well as through the determination of crystallinity index and degree of surface crystallinity. Adsorption of methylene blue was optimized by examining the influence of contact time, initial concentration, temperature, and pH value. It was found that the more ordered structure of cotton and cotton/polyester yarns leads to lower adsorption capacities and better agreement with pseudo-second order kinetic and Langmuir isotherm model, while the more heterogeneous structure of flax and hemp fibers show higher capacities for methylene blue adsorption, better described by the pseudo-first order kinetic and Freundlich isotherm model. Based on the obtained results, waste lignocellulosic fibers and yarns can be utilized for the discoloration of wastewater, thereby solving the problem of waste generated in the textile industry.
利用纺织工业中大量的废弃大麻和亚麻纤维、棉花和棉/涤纶纱线作为廉价有效的吸附剂,去除废水中的亚甲基蓝。采用扫描电镜、傅里叶变换红外光谱、吸碘率、保水率、零电荷点以及结晶度指数和表面结晶度的测定等方法对废纤维和废纱线进行了表征。考察了接触时间、初始浓度、温度和pH值对亚甲基蓝吸附性能的影响。结果表明,棉和棉/涤纶纤维的结构越有序,其吸附量越低,符合拟二级动力学模型和Langmuir等温线模型;而亚麻和大麻纤维的结构越不均匀,其吸附量越高,符合拟一级动力学模型和Freundlich等温线模型。根据所获得的结果,废弃的木质纤维素纤维和纱线可以用于废水的变色,从而解决纺织工业产生的废物问题。
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引用次数: 0
The influence of geological setting and land use on the physical and chemical properties of the soil at the Fruska gora Mountain 地质环境和土地利用对弗鲁斯卡戈拉山土壤理化性质的影响
IF 1 4区 化学 Q4 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-01-01 DOI: 10.2298/jsc221221012g
M. Kašanin-Grubin, G. Veselinović, Nevena Antić, G. Gajica, S. Stojadinović, A. Šajnović, S. Štrbac
Soil erosion is a problem that affects the landscape at different scales and represents a serious challenge for land management and soil conservation in both natural forests and meadows. The aim of this study was to determine how the parent material and land use affect the physical and chemical properties of the soil in the area of the Fruska gora Mountain. The soils were developed on five bedrock types: serpentinite, marl, trachyte, shale, loess and two land use types: forest and meadow. Twenty-three forest soil and 24 meadow soil from a depth of 0-20 cm were sampled from the Fruska gora Mt. Following properties were determined: pH, electrical conductivity, oxidation-reduction potential, content of organic carbon, sodium adsorption ratio, aggregate size and stability. There is no statistically significant difference in pH, Eh, EC, and SAR values between the analyzed forest and meadow soils, but there is a statistically significant difference in the content of Corg. It can be conculded that both the parent matrial, and to a slightly less extent, land use have a great influence on physico-chemical properties of the soil.
土壤侵蚀是一个在不同尺度上影响景观的问题,对天然林和草甸的土地管理和土壤保持构成严重挑战。本研究的目的是确定母质和土地利用如何影响弗鲁斯卡戈拉山地区土壤的物理和化学性质。土壤发育在蛇纹岩、泥灰岩、粗面岩、页岩、黄土5种基岩类型和森林、草甸2种土地利用类型上。研究了森林土壤和草甸土壤的pH值、电导率、氧化还原电位、有机碳含量、钠吸附比、团聚体粒径和稳定性。森林土壤和草甸土壤的pH、Eh、EC和SAR值差异无统计学意义,但Corg含量差异有统计学意义。由此可见,母质对土壤理化性质的影响较大,土地利用对土壤理化性质的影响较小。
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引用次数: 0
Chemically-assisted DNA transfection methods-an overview 化学辅助DNA转染方法综述
IF 1 4区 化学 Q4 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-01-01 DOI: 10.2298/jsc221222019b
Sofija Bekic, S. Jovanović-Šanta
Non-viral chemical-based methods for in vitro cell transfection are commonly used to incorporate foreign gene of interest into mammalian cells due to numerous benefits - high efficiency, low cost and simple methodology. These powerful transfection methods generally do not possess safety risks as virus-based, and cell toxicity is significantly reduced. To obtain transfectants, host cells are usually treated with biocompatible DNA carriers such as calcium phosphate, cationic lipids, DEAE-dextran, polyethylenimine or dendrimers, classifying these methods based on chemical reagents used. All these different approaches are based on the similar principle, formation of encapsulated amphiphilic complexes between DNA and various particles, following cell uptake, most likely mediated by endocytosis. Depending on the aim and design of experiment, the choice of appropriate method is made. This review article outlines strategies of the most widely used chemical transfection techniques, pointing out advantages and limitations of different DNA carriers, as well as findings of researchers how to optimize and enhance efficiency of gene delivery procedure. With methodology constantly being improved, transfection methods described here find their main, biomedical application in gene therapy, a promising way to introduce functional copy of exogenous gene to genetically defective target cells.
体外细胞转染的非病毒化学方法通常用于将感兴趣的外源基因导入哺乳动物细胞,因为它具有许多优点-高效率,低成本和简单的方法。这些强大的转染方法通常不具有病毒为基础的安全风险,并且细胞毒性显着降低。为了获得转染物,宿主细胞通常用生物相容性DNA载体如磷酸钙、阳离子脂质、deae -葡聚糖、聚乙烯亚胺或树状大分子处理,并根据使用的化学试剂对这些方法进行分类。所有这些不同的方法都基于相似的原理,即在细胞摄取后,DNA和各种颗粒之间形成包被的两亲性复合物,很可能是由内吞作用介导的。根据实验目的和实验设计,选择合适的实验方法。本文综述了目前应用最广泛的化学转染技术的策略,指出了不同DNA载体的优点和局限性,以及研究人员在如何优化和提高基因传递过程效率方面的发现。随着方法的不断改进,本文所述的转染方法在基因治疗中得到了主要的生物医学应用,这是一种将外源基因的功能拷贝引入遗传缺陷靶细胞的有希望的方法。
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引用次数: 0
Synthesis and antiproliferative activity of new thiazole hybrids with [3.3.0]furofuranone or tetrahydrofuran scaffolds 以[3.3.0]呋喃或四氢呋喃为支架的新型噻唑杂合体的合成及抗增殖活性研究
IF 1 4区 化学 Q4 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-01-01 DOI: 10.2298/jsc221130002k
V. Kojić, Miloš Svirčev, Sanja Djokić, Ivana Kovacevic, M. Rodić, Bojana Sreco-Zelenovic, V. Popsavin, Mirjana Popsavin
New thiazole hybrids were synthesized and evaluated for their in vitro cytotoxicity against a panel of human malignant cell lines. The key steps in the synthesis of hybrids 3-7 involved the initial condensation of appropriate aldononitriles with cysteine ethyl ester hydrochloride, followed by subsequent treatment of resulting thiazolines with DBU to form the thiazole ring. Bioiso-steres 8 and 14 have been prepared after the stereoselective addition of 2-(tri-methylsilyl)thiazole to the hemiacetals obtained by periodate cleavage of terminal diol functionality in the suitably protected D-glucose derivatives. The obtained analogues showed various antiproliferative activities in the cultures of several tumour cell lines. Hybrid 6 was the most potent in HeLa cells, exhibiting more than 10 and 4 times stronger activity than both leads 1 and 2, respectively. The most active compound in Raji cells was hybrid 12, which was nearly 2-fold more potent than the clinical antitumour drug doxorubicin. All analogues were more potent in A549 cells with respect to lead 1, while compounds 6 and 7 were slightly more active than DOX. Preliminary SAR analysis revealed that the presence of a cinnamate group at the C-3 position in analogues of type 7 increases the activity of resulting molecular hybrids.
合成了新的噻唑杂交体,并评价了它们对一组人类恶性细胞系的体外细胞毒性。合成杂化物3-7的关键步骤是先用半胱氨酸乙酯盐酸盐缩合适当的醛脲腈,然后用DBU处理得到的噻唑类,形成噻唑环。在适当保护的d -葡萄糖衍生物中,通过高碘酸盐裂解末端二醇官能团得到半缩醛,在此基础上立体选择性加成2-(三甲基硅基)噻唑,制备了生物异构体8和14。所获得的类似物在几种肿瘤细胞系的培养中显示出不同的抗增殖活性。杂种6在HeLa细胞中最有效,其活性分别比导联1和导联2强10倍和4倍。Raji细胞中最活跃的化合物是杂交12,其效力比临床抗肿瘤药物阿霉素高出近2倍。与铅1相比,所有类似物在A549细胞中都更有效,而化合物6和7的活性略高于DOX。初步的SAR分析显示,在7型类似物的C-3位置存在一个肉桂酸基团,从而增加了分子杂交的活性。
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引用次数: 0
Synthesis and antiproliferative activity of (5R)-cleistenolide and analogues (5R)-丁香烯内酯及其类似物的合成及抗增殖活性研究
IF 1 4区 化学 Q4 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-01-01 DOI: 10.2298/jsc230126018f
(5R)-Cleistenolide and a few related analogues have been synthesized starting from d-glucose. The key steps of the synthesis included a Z-selective Wittig olefination and an intramolecular Mitsunobu reaction with an inversion of configuration at the C-5 position. In vitro antiproliferative activity of synthesized compounds was tested on a panel of eight human tumour cells and against a single normal cell line (MRC-5). The majority of tested compounds showed strong antiproliferative effects on certain human tumour cells and all of them showed negligible toxicity to normal foetal lung fibroblasts (MRC-5). The most active compound obtained in this work is lactone 5, which in MDA-MB 231 cell culture showed the same activity as doxorubicin (IC50 0.09 ?M). Strong antiproliferative activities of analogues 2, 5 and 6 were recorded in the K562 cell line (IC50 0.21, 0.34 and 0.33 ?M, respectively), in which they showed very similar activities to doxorubicin (IC50 0.25 ?M). A performed SAR study revealed that a change in the stereochemistry at the C-5 position may increase the activity of resulting stereoisomers.
(5R)-Cleistenolide和一些相关的类似物已经从d-葡萄糖开始合成。合成的关键步骤包括z选择性Wittig烯化和分子内C-5位构型反转的Mitsunobu反应。合成化合物的体外抗增殖活性在8个人类肿瘤细胞组和单个正常细胞系(MRC-5)上进行了测试。大多数被测试的化合物对某些人类肿瘤细胞有很强的抗增殖作用,对正常胎儿肺成纤维细胞(MRC-5)的毒性均可忽略不计。本研究获得的活性最高的化合物是内酯5,其在MDA-MB 231细胞培养中与阿霉素具有相同的活性(IC50为0.09 μ M)。类似物2、5和6在K562细胞株中具有较强的抗增殖活性(IC50分别为0.21、0.34和0.33 μ M),与阿霉素的IC50非常接近(IC50为0.25 μ M)。一项进行的SAR研究表明,在C-5位置的立体化学变化可能会增加所产生的立体异构体的活性。
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引用次数: 0
Quantum-mechanical study of the electronic properties of UxPuyOz compounds formed during the recovery of spent nuclear fuel 废核燃料回收过程中形成的UxPuyOz化合物电子特性的量子力学研究
IF 1 4区 化学 Q4 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2023-01-01 DOI: 10.2298/jsc230213038g
A. Galashev, A. Vorob’ev, Y. Zaikov
A promising way to recover spent nuclear fuel (SNF) is the method of extracting transuranium compounds from molten salt, which makes it possible to obtain a partial separation between transuranium compounds and lanthanides. This work is devoted to the quantum mechanical study of changes in the structure, energy and electronic properties of the main SNF component, uranium dioxide, upon the removal of oxygen from the system. The influence on the considered properties of the system of the substitution of uranium by plutonium is also studied at a ratio of the number of plutonium atoms to uranium atoms of 1:7 and 1:3. The removal of oxygen leads to a narrowing of the band gap up to the transition to a conductive state at a ratio of uranium to oxygen of 2:3. The band gap narrows and metallization sets in even when uranium is replaced by plutonium. A two-stage UO2 metallization scheme based on lithium reduction and direct (electronic) reduction is proposed.
从熔盐中提取超铀化合物是回收乏核燃料(SNF)的一种很有前途的方法,该方法使超铀化合物和镧系元素之间的部分分离成为可能。这项工作致力于从系统中去除氧后,SNF主要成分二氧化铀的结构、能量和电子特性变化的量子力学研究。以钚原子数与铀原子数的比例分别为1:7和1:3时,还研究了钚取代铀对所考虑的系统性质的影响。氧的去除导致带隙缩小,直到铀氧比为2:3时过渡到导电状态。即使铀被钚取代,带隙也会缩小,金属化也会开始。提出了一种基于锂还原和直接(电子)还原的两阶段UO2金属化方案。
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引用次数: 0
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Journal of The Serbian Chemical Society
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