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A scalable, spin-free approach to generate enhanced induced pluripotent stem cell–derived natural killer cells for cancer immunotherapy 一种可扩展的无自旋方法,可生成用于癌症免疫疗法的增强型诱导多能干细胞衍生自然杀伤细胞。
IF 3.2 4区 医学 Q3 CELL BIOLOGY Pub Date : 2024-09-13 DOI: 10.1111/imcb.12820
Gustavo R Rossi, Jane Sun, Cheng-Yu Lin, Joshua KM Wong, Louisa Alim, Pui Yeng Lam, Kiarash Khosrotehrani, Ernst Wolvetang, Seth W Cheetham, Emily B Derrick, Akwasi Amoako, Christoph Lehner, Andrew J Brooks, Paul A Beavis, Fernando Souza-Fonseca-Guimaraes

Natural killer (NK) cells play a vital role in innate immunity and show great promise in cancer immunotherapy. Traditional sources of NK cells, such as the peripheral blood, are limited by availability and donor variability. In addition, in vitro expansion can lead to functional exhaustion and gene editing challenges. This study aimed to harness induced pluripotent stem cell (iPSC) technology to provide a consistent and scalable source of NK cells, overcoming the limitations of traditional sources and enhancing the potential for cancer immunotherapy applications. We developed human placental–derived iPSC lines using reprogramming techniques. Subsequently, an optimized two-step differentiation protocol was introduced to generate high-purity NK cells. Initially, iPSCs were differentiated into hematopoietic-like stem cells using spin-free embryoid bodies (EBs). Subsequently, the EBs were transferred to ultra-low attachment plates to induce NK cell differentiation. iPSC-derived NK (iNK) cells expressed common NK cell markers (NKp46, NKp30, NKp44, CD16 and eomesodermin) at both RNA and protein levels. iNK cells demonstrated significant resilience to cryopreservation and exhibited enhanced cytotoxicity. The incorporation of a chimeric antigen receptor (CAR) construct further augmented their cytotoxic potential. This study exemplifies the feasibility of generating iNK cells with high purity and enhanced functional capabilities, their improved resilience to cryopreservation and the potential to have augmented cytotoxicity through CAR expression. Our findings offer a promising pathway for the development of potential cellular immunotherapies, highlighting the critical role of iPSC technology in overcoming challenges associated with traditional NK cell sources.

自然杀伤(NK)细胞在先天性免疫中发挥着重要作用,在癌症免疫疗法中大有可为。传统的 NK 细胞来源(如外周血)受到可用性和供体变异性的限制。此外,体外扩增可能导致功能耗竭和基因编辑难题。本研究旨在利用诱导多能干细胞(iPSC)技术,提供稳定、可扩展的NK细胞来源,克服传统来源的局限性,提高癌症免疫疗法的应用潜力。我们利用重编程技术开发了人类胎盘iPSC系。随后,我们引入了一个优化的两步分化方案来生成高纯度的NK细胞。首先,利用无旋胚状体(EB)将iPSC分化成造血类干细胞。iPSC 衍生的 NK(iNK)细胞在 RNA 和蛋白质水平上都表达常见的 NK 细胞标记(NKp46、NKp30、NKp44、CD16 和 eomesodermin)。嵌合抗原受体(CAR)构建体的加入进一步增强了它们的细胞毒性潜力。这项研究证明了生成具有高纯度和增强功能的 iNK 细胞的可行性,它们对冷冻保存的适应性得到了改善,并有可能通过 CAR 表达增强细胞毒性。我们的研究结果为开发潜在的细胞免疫疗法提供了一条前景广阔的途径,凸显了 iPSC 技术在克服传统 NK 细胞来源相关挑战方面的关键作用。
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引用次数: 0
The immunoregulatory potential of eosinophil subsets 嗜酸性粒细胞亚群的免疫调节潜力
IF 3.2 4区 医学 Q3 CELL BIOLOGY Pub Date : 2024-09-13 DOI: 10.1111/imcb.12819
Sophia-Louise Noble, Thomas C Mules, Graham Le Gros, Stephen Inns

Eosinophils have traditionally been viewed as pathological effector cells primarily involved in antiparasitic and allergic immune reactions; however, it is becoming increasingly apparent that eosinophils are multifaceted leukocytes that contribute to a variety of roles in both health and disease. Recent research shows that eosinophils play important immunoregulatory roles across various tissue sites including the gastrointestinal tract, adipose tissue, lung, liver, heart, muscles, thymus and bone marrow. With recent advances in our knowledge and appreciation of eosinophil immunoregulatory functions at these tissue sites, as well as emerging research demonstrating the existence of distinct subsets of eosinophils, a review of this topic is timely. Although some questions remain regarding eosinophil function and heterogeneity, this review summarizes the contemporary understanding of the immunoregulatory roles of eosinophils across various tissues and discusses the latest research on eosinophil heterogeneity and subsets.

嗜酸性粒细胞传统上被视为病理效应细胞,主要参与抗寄生虫和过敏性免疫反应;然而,越来越明显的是,嗜酸性粒细胞是多方面的白细胞,在健康和疾病中发挥着多种作用。最新研究表明,嗜酸性粒细胞在胃肠道、脂肪组织、肺、肝、心脏、肌肉、胸腺和骨髓等不同组织部位发挥着重要的免疫调节作用。随着我们对嗜酸性粒细胞在这些组织部位的免疫调节功能的了解和认识不断加深,以及新的研究表明存在不同的嗜酸性粒细胞亚群,对这一主题进行回顾是非常及时的。尽管在嗜酸性粒细胞的功能和异质性方面仍存在一些问题,但本综述总结了当代对嗜酸性粒细胞在不同组织中的免疫调节作用的认识,并讨论了有关嗜酸性粒细胞异质性和亚群的最新研究。
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引用次数: 0
The expanding universe of type I regulatory T cell biology: a new role in cancer immunotherapy 不断扩展的 I 型调节性 T 细胞生物学:癌症免疫疗法中的新角色。
IF 3.2 4区 医学 Q3 CELL BIOLOGY Pub Date : 2024-09-11 DOI: 10.1111/imcb.12822
Jason F Nideffer, Prasanna Jagannathan

In this article, we discuss new findings which suggest that type I regulatory T (Tr1) cells can interfere with cancer vaccine efficacy in mice by exerting strong regulatory control over antitumor immune responses.

本文讨论的新发现表明,I型调节性T细胞(Tr1)可通过对抗肿瘤免疫反应施加强有力的调节控制,干扰小鼠体内癌症疫苗的疗效。
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引用次数: 0
Embracing computational immunology 拥抱计算免疫学
IF 3.2 4区 医学 Q3 CELL BIOLOGY Pub Date : 2024-09-08 DOI: 10.1111/imcb.12817
Pablo F Cañete, Zewen Kelvin Tuong

This Special Feature explores the fascinating field of Computational Immunology and features reviews on recent immunology research that used computational tools and concepts to understand the nexus of cancer immunology, autoimmunity and host-pathogen interactions.

本特刊探讨了令人着迷的计算免疫学领域,并对近期利用计算工具和概念了解癌症免疫学、自身免疫学和宿主-病原体相互作用的免疫学研究进行了综述。
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引用次数: 0
Unraveling the origins of pathogenic CXCL13+ helper T cells in systemic lupus erythematosus 揭示系统性红斑狼疮中致病性 CXCL13+ 辅助 T 细胞的起源。
IF 3.2 4区 医学 Q3 CELL BIOLOGY Pub Date : 2024-09-01 DOI: 10.1111/imcb.12818
Sam Nettelfield, Zhian Chen

This Research Highlight discusses a recent publication, where the authors identified an increase in CXCL13+ peripheral helper T/follicular helper T cells, which was concomitant with a decrease in CD96+ T helper 22 (TH22) cells in patients with systemic lupus erythematosus. The genetic and epigenetic cues that reciprocally regulate this pathogenic imbalance of T-cell subsets were also identified, thus providing targets for therapeutic intervention.

本研究亮点讨论了最近发表的一篇论文,作者在该论文中发现,在系统性红斑狼疮患者中,CXCL13+外周辅助性T细胞/滤泡辅助性T细胞增加的同时,CD96+ T辅助性22(TH22)细胞减少。此外,还确定了相互调控这种致病性 T 细胞亚群失衡的遗传和表观遗传线索,从而为治疗干预提供了靶点。
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引用次数: 0
Improving undergraduate education in immunology through assessment of interdisciplinary scientific knowledge. 通过评估跨学科科学知识改进免疫学本科教育。
IF 3.2 4区 医学 Q3 CELL BIOLOGY Pub Date : 2024-08-20 DOI: 10.1111/imcb.12815
Joshua J Baty, Isha Patel, Jared P Taylor, Connor Graben, Jill Deaver, Louis B Justement, Heather A Bruns

The interdisciplinary nature of immunology can make studying not only engaging but also challenging, as understanding immunologic processes and immune system components requires foundational knowledge from several science disciplines. The University of Alabama at Birmingham has a unique, 4-year, Undergraduate Immunology Program (UIP) that provides a comprehensive curriculum in immunology that includes five core courses starting in the second year, at which point, students are in the process of completing basic science sequences. For this study, students in courses across the UIP curriculum were asked to identify basic science topics that relate to four immunology concepts. In addition, students were surveyed on their confidence in understanding each of the basic science topics and were asked to identify the course in which they felt that they had fully learned the topic. Data from this study did not demonstrate a change in students' interdisciplinary science competency from the second to fourth year. Importantly, students reported that they fully understood 11 out of 12 basic science concepts in courses offered in their first and second years, with confidence in basic science topics significantly improving from the second to third year. The lack of demonstrated improvement in interdisciplinary understanding across the curriculum may be attributed to the fact that students are able to integrate basic science topics with foundational immunologic concepts as early as their second year. Importantly, these findings suggest that the integration or review of basic science topics in an immunology course may improve students' comprehension of foundational immunology concepts and interdisciplinary science competency.

免疫学的跨学科性质使学习不仅具有吸引力,而且具有挑战性,因为要理解免疫过程和免疫系统的组成部分,需要多个学科的基础知识。阿拉巴马大学伯明翰分校(University of Alabama at Birmingham)有一个独特的四年制本科免疫学项目(UIP),该项目提供全面的免疫学课程,包括从第二年开始的五门核心课程,此时学生正在完成基础科学课程。在这项研究中,UIP 课程的学生被要求找出与四个免疫学概念相关的基础科学主题。此外,还调查了学生对理解每个基础科学主题的信心,并要求他们确定在哪门课程中充分学习了该主题。这项研究的数据表明,从二年级到四年级,学生的跨学科科学能力没有发生变化。重要的是,学生们报告说,在第一学年和第二学年开设的课程中,他们完全理解了 12 个基础科学概念中的 11 个,从第二学年到第三学年,他们对基础科学课题的信心有了显著提高。跨学科理解能力在整个课程中没有明显提高,这可能是因为学生早在二年级就能将基础科学课题与免疫学基础概念结合起来。重要的是,这些研究结果表明,在免疫学课程中整合或复习基础科学主题可能会提高学生对基础免疫学概念的理解和跨学科科学能力。
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引用次数: 0
Myddosomes in Toll-like receptor signaling—one to bind and rule them all Toll样受体信号中的多糖体--结合并统治一切。
IF 3.2 4区 医学 Q3 CELL BIOLOGY Pub Date : 2024-08-19 DOI: 10.1111/imcb.12816
Carmen D Mathmann, Thomas E Schultz, Leslie C Domínguez Cadena, Antje Blumenthal

Toll-like receptors (TLRs) are innate immune sensors for the presence of pathogens and endogenous danger signals. TLR activation results in conserved intracellular signaling events that orchestrate inflammation and antimicrobial defense. While the identity and interplay of key TLR signaling components are well established, how these largely cytosolic proteins are physically connected is not well understood. For the activation of conserved intracellular signaling events, most TLRs engage the adapter MyD88 (myeloid differentiation primary response 88), which assembles into higher-order protein complexes, myddosomes. In their recent publication, Fisch et al. present evidence that oligomeric myddosomes detach from initiating TLRs and evolve into larger scaffolds that dynamically assemble not only proximal but also distal cytosolic elements required to execute the entire cascade of the TLR–MyD88 signaling pathway. Coinciding with decline in TLR signaling over time, myddosomes progressively recruit autophagy machinery that mediates myddosome clearance. These findings expand the current understanding of TLR signaling by positioning myddosomes as the central structural element that physically assembles the key executors and regulators of TLR–MyD88-dependent intracellular signaling cascades.

Toll 样受体(TLR)是一种先天性免疫传感器,能感知病原体和内源性危险信号的存在。TLR 激活会导致保守的细胞内信号事件,从而协调炎症和抗微生物防御。虽然 TLR 信号关键成分的特性和相互作用已得到公认,但这些主要是细胞膜蛋白的物理连接方式却不甚明了。为了激活保守的细胞内信号事件,大多数 TLR 与适配器 MyD88(髓样分化主要反应 88)结合,后者组装成高阶蛋白复合物--myddosomes。Fisch 等人在最近发表的论文中提出了证据,证明低聚 myddosom 脱离了启动 TLR,进化成更大的支架,不仅能动态组装近端,还能组装执行 TLR-MyD88 信号通路整个级联所需的远端细胞膜元件。随着时间的推移,TLR 信号衰减,粘多糖体也会逐渐招募自噬机制,介导粘多糖体的清除。这些发现扩展了目前对 TLR 信号的理解,将粘多糖体定位为物理组装 TLR-MyD88 依赖性细胞内信号级联的关键执行者和调节者的核心结构元素。
{"title":"Myddosomes in Toll-like receptor signaling—one to bind and rule them all","authors":"Carmen D Mathmann,&nbsp;Thomas E Schultz,&nbsp;Leslie C Domínguez Cadena,&nbsp;Antje Blumenthal","doi":"10.1111/imcb.12816","DOIUrl":"10.1111/imcb.12816","url":null,"abstract":"<p>Toll-like receptors (TLRs) are innate immune sensors for the presence of pathogens and endogenous danger signals. TLR activation results in conserved intracellular signaling events that orchestrate inflammation and antimicrobial defense. While the identity and interplay of key TLR signaling components are well established, how these largely cytosolic proteins are physically connected is not well understood. For the activation of conserved intracellular signaling events, most TLRs engage the adapter MyD88 (myeloid differentiation primary response 88), which assembles into higher-order protein complexes, myddosomes. In their recent publication, Fisch <i>et al</i>. present evidence that oligomeric myddosomes detach from initiating TLRs and evolve into larger scaffolds that dynamically assemble not only proximal but also distal cytosolic elements required to execute the entire cascade of the TLR–MyD88 signaling pathway. Coinciding with decline in TLR signaling over time, myddosomes progressively recruit autophagy machinery that mediates myddosome clearance. These findings expand the current understanding of TLR signaling by positioning myddosomes as the central structural element that physically assembles the key executors and regulators of TLR–MyD88-dependent intracellular signaling cascades.</p>","PeriodicalId":179,"journal":{"name":"Immunology & Cell Biology","volume":"102 9","pages":"752-756"},"PeriodicalIF":3.2,"publicationDate":"2024-08-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/imcb.12816","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141999068","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Immunology in Practice: a modular framework to support Master of Science students conference attendance and engagement. 免疫学实践:支持理科硕士生参加和参与会议的模块框架。
IF 3.2 4区 医学 Q3 CELL BIOLOGY Pub Date : 2024-08-14 DOI: 10.1111/imcb.12814
Malgorzata Trela, Sophie Rutschmann

Sharing a passion for the advancement of the discipline, the scientific community provides an authentic environment for new members to acquire the knowledge and develop the professional identity needed for their future careers. Supporting opportunities for higher education students to participate in this community can complement their classroom-based education and be extremely beneficial to their learning. Situated in the authentic environment of the scientific community, conferences are organized events where professionals meet to advance their discipline, and which have been shown to provide unique learning opportunities for university students. Here we present a modular framework created to support Imperial College London's Master of Science in Immunology students' attendance at the British Society for Immunology Annual Congress. The module's evaluation indicates an overall students' satisfaction with the content, organization, teaching, assessment, feedback and community aspects of the framework and draws attention to areas of potential improvements. Furthermore, the data emphasize the importance of preconference preparation, of academic mentoring and discusses the role of peer support. Finally, the data highlight the benefits for students of discovering the true breadth and depth of their discipline, of interacting with members of the community and how these contribute to the development of their professional identity.

科学界对推动学科发展有着共同的热情,他们为新成员提供了一个真实的环境,使他们能够获得知识并发展未来职业生涯所需的专业身份。为高校学生提供参与这一社区的机会,可以补充他们的课堂教育,对他们的学习大有裨益。在科学界的真实环境中,会议是专业人士为推动学科发展而举行的有组织活动,已被证明能为大学生提供独特的学习机会。在此,我们介绍一个模块框架,旨在支持伦敦帝国学院免疫学理学硕士学生参加英国免疫学会年会。模块评估显示,学生对该框架的内容、组织、教学、评估、反馈和社区等方面总体满意,并提请注意可能改进的地方。此外,数据还强调了会前准备、学术指导的重要性,并讨论了同伴支持的作用。最后,数据强调了学生发现自己学科的真正广度和深度、与社区成员互动的好处,以及这些如何促进其专业身份的发展。
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引用次数: 0
A combined interactive online simulation and face-to-face laboratory enable undergraduate student proficiency in hemocytometer use, cell density and viability calculations. 互动式在线模拟和面对面实验室相结合,使本科生能够熟练掌握血细胞计数器的使用、细胞密度和存活率的计算。
IF 3.2 4区 医学 Q3 CELL BIOLOGY Pub Date : 2024-07-30 DOI: 10.1111/imcb.12813
Maurizio Costabile, Sheree Bailey, Gareth Denyer

A hemocytometer is a key piece of laboratory equipment typically used in diagnostic and immunology research laboratories to enumerate white blood cells. The accurate quantification of cell density is essential to ensure accurate numbers of cells are added to assays to generate valid data. Hence, learning to correctly use a hemocytometer is a critical skill for all undergraduate immunology students. However, this skill can be challenging to learn because of students' unfamiliarity with correct cell identification, differentiating viable versus dead cells and mathematical proficiency in calculating cell density and viability. To address these issues, we developed an interactive computer simulation that replicated all aspects of a Neubauer-style hemocytometer. This simulation was used to teach second-year undergraduate immunology students before a face-to-face (F-2-F) laboratory exercise where these skills were applied. Using a mixed methods approach, student performance and feedback were collected on broad aspects of the intervention and its benefits to the F-2-F setting. The approach was found to be extremely successful with all measures indicating a significant impact of the virtual hemocytometer on student learning, understanding and confidence. We suggest that integrating an online simulation to teach students the fundamentals of hemocytometer use and calculations is a valuable educational aid for learning this important skill.

血细胞计数器是一种关键的实验室设备,通常用于诊断和免疫学研究实验室对白细胞进行计数。准确量化细胞密度对于确保在检测中加入准确数量的细胞以生成有效数据至关重要。因此,学会正确使用血细胞计数器是所有免疫学本科生的一项重要技能。然而,由于学生不熟悉正确的细胞识别、区分存活细胞和死亡细胞以及计算细胞密度和存活率的数学熟练程度,这项技能的学习具有挑战性。为了解决这些问题,我们开发了一种交互式计算机模拟,复制了纽鲍尔式血细胞计数器的所有方面。在应用这些技能的面对面(F-2-F)实验室练习之前,我们利用该模拟软件为免疫学本科二年级学生授课。采用混合方法收集了学生的表现和反馈,内容涉及干预措施的各个方面及其对 F-2-F 设置的益处。我们发现这种方法非常成功,所有的测量结果都表明虚拟血球计数器对学生的学习、理解和信心产生了重大影响。我们认为,整合在线模拟教学,向学生传授血球计数器的使用和计算基础知识,是学习这一重要技能的重要教育辅助工具。
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引用次数: 0
Spatial resolution of the head and neck cancer tumor microenvironment to identify tumor and stromal features associated with therapy response 头颈癌肿瘤微环境的空间分辨率,以确定与治疗反应相关的肿瘤和基质特征。
IF 3.2 4区 医学 Q3 CELL BIOLOGY Pub Date : 2024-07-24 DOI: 10.1111/imcb.12811
Naomi Berrell, James Monkman, Meg Donovan, Tony Blick, Ken O'Byrne, Rahul Ladwa, Chin Wee Tan, Arutha Kulasinghe

Head and neck cancer (HNC) is the seventh most common cancer globally, resulting in 440 000 deaths per year. While there have been advancements in chemoradiotherapy and surgery, relapse occurs in more than half of HNCs, and these patients have a median survival of 10 months and a 2-year survival of < 20%. Only a subset of patients displays durable benefits from immunotherapies in metastatic and recurrent HNC, making it critical to understand the tumor microenvironment (TME) underpinning therapy responses in HNC. To recognize biological differences within the TME that may be predictive of immunotherapy response, we applied cutting-edge geospatial whole-transcriptome profiling (NanoString GeoMx Digital Spatial Profiler) and spatial proteomics profiling (Akoya PhenoCycler-Fusion) on a tumor microarray consisting of 25 cores from 12 patients that included 4 immunotherapy-unresponsive (8 cores) and 2 immunotherapy-responsive patients (5 cores), as well as 6 immunotherapy naïve patients (12 cores). Through high-plex, regional-based transcriptomic mapping of the tumor and TME, pathways involved with the complement system and hypoxia were identified to be differentially expressed in patients who went on to experience a poor immunotherapy response. Single-cell, targeted proteomic analysis found that immune cell infiltration of the cancer cell mass and interactions of CD8 T cells with tumor and other immune cells were associated with positive immunotherapy response. The relative abundance of specific tumor phenotypes and their interactions with various immune cells was identified to be different between response groups. This study demonstrates how spatial transcriptomics and proteomics can resolve novel alterations in the TME of HNC that may contribute to therapy sensitivity and resistance.

头颈癌(HNC)是全球第七大常见癌症,每年造成 44 万人死亡。虽然放化疗和手术治疗取得了进展,但半数以上的 HNC 会复发,这些患者的中位生存期为 10 个月,2 年生存率低于 20%。只有一部分患者能从转移性和复发性HNC的免疫疗法中获得持久疗效,因此了解HNC治疗反应所依赖的肿瘤微环境(TME)至关重要。为了识别肿瘤微环境中可能预示免疫疗法反应的生物学差异,我们应用了尖端地理空间分析技术、我们在由12名患者的25个核芯组成的肿瘤芯片上应用了前沿的地理空间全转录组分析(NanoString GeoMx Digital Spatial Profiler)和空间蛋白质组分析(Akoya PhenoCycler-Fusion),其中包括4名免疫疗法无反应患者(8个核芯)和2名免疫疗法反应患者(5个核芯),以及6名免疫疗法幼稚患者(12个核芯)。通过对肿瘤和TME进行高倍、基于区域的转录组图谱绘制,发现在免疫治疗反应不佳的患者中,与补体系统和缺氧有关的通路有不同程度的表达。单细胞靶向蛋白质组分析发现,免疫细胞对癌细胞团的浸润以及 CD8 T 细胞与肿瘤和其他免疫细胞的相互作用与免疫疗法的阳性反应有关。特定肿瘤表型的相对丰度及其与各种免疫细胞的相互作用在不同反应组之间存在差异。这项研究展示了空间转录组学和蛋白质组学如何解析 HNC TME 中可能导致治疗敏感性和耐药性的新变化。
{"title":"Spatial resolution of the head and neck cancer tumor microenvironment to identify tumor and stromal features associated with therapy response","authors":"Naomi Berrell,&nbsp;James Monkman,&nbsp;Meg Donovan,&nbsp;Tony Blick,&nbsp;Ken O'Byrne,&nbsp;Rahul Ladwa,&nbsp;Chin Wee Tan,&nbsp;Arutha Kulasinghe","doi":"10.1111/imcb.12811","DOIUrl":"10.1111/imcb.12811","url":null,"abstract":"<p>Head and neck cancer (HNC) is the seventh most common cancer globally, resulting in 440 000 deaths per year. While there have been advancements in chemoradiotherapy and surgery, relapse occurs in more than half of HNCs, and these patients have a median survival of 10 months and a 2-year survival of &lt; 20%. Only a subset of patients displays durable benefits from immunotherapies in metastatic and recurrent HNC, making it critical to understand the tumor microenvironment (TME) underpinning therapy responses in HNC. To recognize biological differences within the TME that may be predictive of immunotherapy response, we applied cutting-edge geospatial whole-transcriptome profiling (NanoString GeoMx Digital Spatial Profiler) and spatial proteomics profiling (Akoya PhenoCycler-Fusion) on a tumor microarray consisting of 25 cores from 12 patients that included 4 immunotherapy-unresponsive (8 cores) and 2 immunotherapy-responsive patients (5 cores), as well as 6 immunotherapy naïve patients (12 cores). Through high-plex, regional-based transcriptomic mapping of the tumor and TME, pathways involved with the complement system and hypoxia were identified to be differentially expressed in patients who went on to experience a poor immunotherapy response. Single-cell, targeted proteomic analysis found that immune cell infiltration of the cancer cell mass and interactions of CD8 T cells with tumor and other immune cells were associated with positive immunotherapy response. The relative abundance of specific tumor phenotypes and their interactions with various immune cells was identified to be different between response groups. This study demonstrates how spatial transcriptomics and proteomics can resolve novel alterations in the TME of HNC that may contribute to therapy sensitivity and resistance.</p>","PeriodicalId":179,"journal":{"name":"Immunology & Cell Biology","volume":"102 9","pages":"830-846"},"PeriodicalIF":3.2,"publicationDate":"2024-07-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/imcb.12811","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141756012","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Immunology & Cell Biology
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